HEADER OXIDOREDUCTASE 23-FEB-07 2OYU TITLE INDOMETHACIN-(S)-ALPHA-ETHYL-ETHANOLAMIDE BOUND TO CYCLOOXYGENASE-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROSTAGLANDIN G/H SYNTHASE 1; COMPND 3 CHAIN: P; COMPND 4 SYNONYM: CYCLOOXYGENASE-1, COX-1, PROSTAGLANDIN-ENDOPEROXIDE SYNTHASE COMPND 5 1, PROSTAGLANDIN H2 SYNTHASE 1, PGH SYNTHASE 1, PGHS-1, PHS 1; COMPND 6 EC: 1.14.99.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OVIS ARIES; SOURCE 3 ORGANISM_COMMON: SHEEP; SOURCE 4 ORGANISM_TAXID: 9940; SOURCE 5 OTHER_DETAILS: SHEEP VESICULAR GLAND KEYWDS COX, PGHS, INDOMETHACIN, NSAID, HEME, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.A.HARMAN,R.M.GARAVITO REVDAT 8 13-NOV-24 2OYU 1 REMARK REVDAT 7 30-AUG-23 2OYU 1 HETSYN REVDAT 6 29-JUL-20 2OYU 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 18-OCT-17 2OYU 1 REMARK REVDAT 4 13-JUL-11 2OYU 1 VERSN REVDAT 3 24-FEB-09 2OYU 1 VERSN REVDAT 2 09-OCT-07 2OYU 1 JRNL REVDAT 1 24-JUL-07 2OYU 0 JRNL AUTH C.A.HARMAN,M.V.TURMAN,K.R.KOZAK,L.J.MARNETT,W.L.SMITH, JRNL AUTH 2 R.M.GARAVITO JRNL TITL STRUCTURAL BASIS OF ENANTIOSELECTIVE INHIBITION OF JRNL TITL 2 CYCLOOXYGENASE-1 BY S-ALPHA-SUBSTITUTED INDOMETHACIN JRNL TITL 3 ETHANOLAMIDES. JRNL REF J.BIOL.CHEM. V. 282 28096 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17656360 JRNL DOI 10.1074/JBC.M701335200 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 27878 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1400 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1912 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.3740 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.4150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4408 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 192 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : UNVERIFIED REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94000 REMARK 3 B22 (A**2) : 0.94000 REMARK 3 B33 (A**2) : -1.41000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.510 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.336 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.352 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 37.204 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4761 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6509 ; 1.520 ; 2.018 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 552 ; 6.412 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 209 ;38.495 ;22.967 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 703 ;20.021 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;18.336 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 701 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3639 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2534 ; 0.243 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3301 ; 0.324 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 183 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 64 ; 0.230 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.213 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2828 ; 0.371 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4472 ; 0.656 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2209 ; 1.005 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2035 ; 1.665 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : P 35 P 582 REMARK 3 ORIGIN FOR THE GROUP (A): 245.9604 99.6051 -36.3582 REMARK 3 T TENSOR REMARK 3 T11: 0.2570 T22: -0.3506 REMARK 3 T33: -0.2234 T12: -0.4447 REMARK 3 T13: -0.0243 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.1297 L22: 0.7273 REMARK 3 L33: 1.6470 L12: -0.5156 REMARK 3 L13: -0.0687 L23: 0.1519 REMARK 3 S TENSOR REMARK 3 S11: 0.0243 S12: 0.2693 S13: -0.0627 REMARK 3 S21: -0.0758 S22: -0.0737 S23: 0.0003 REMARK 3 S31: 0.6082 S32: -0.3265 S33: 0.0494 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28010 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 19.00 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : 0.33500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1DIY (PROTEIN ONLY) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, LITHIUM CHLORIDE, REMARK 280 SODIUM AZIDE, AND BETA-OCTYLGLUCOSIDE, PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.93200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.46600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.69900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.23300 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 86.16500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 68.93200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 34.46600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 17.23300 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 51.69900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 86.16500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 14490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 68.93200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET P 1 REMARK 465 SER P 2 REMARK 465 ARG P 3 REMARK 465 GLN P 4 REMARK 465 SER P 5 REMARK 465 ILE P 6 REMARK 465 SER P 7 REMARK 465 LEU P 8 REMARK 465 ARG P 9 REMARK 465 PHE P 10 REMARK 465 PRO P 11 REMARK 465 LEU P 12 REMARK 465 LEU P 13 REMARK 465 LEU P 14 REMARK 465 LEU P 15 REMARK 465 LEU P 16 REMARK 465 LEU P 17 REMARK 465 SER P 18 REMARK 465 PRO P 19 REMARK 465 SER P 20 REMARK 465 PRO P 21 REMARK 465 VAL P 22 REMARK 465 PHE P 23 REMARK 465 SER P 24 REMARK 465 ALA P 25 REMARK 465 ASP P 26 REMARK 465 PRO P 27 REMARK 465 GLY P 28 REMARK 465 ALA P 29 REMARK 465 PRO P 30 REMARK 465 ALA P 31 REMARK 465 PRO P 585 REMARK 465 ARG P 586 REMARK 465 GLN P 587 REMARK 465 GLU P 588 REMARK 465 ASP P 589 REMARK 465 ARG P 590 REMARK 465 PRO P 591 REMARK 465 GLY P 592 REMARK 465 VAL P 593 REMARK 465 GLU P 594 REMARK 465 ARG P 595 REMARK 465 PRO P 596 REMARK 465 PRO P 597 REMARK 465 THR P 598 REMARK 465 GLU P 599 REMARK 465 LEU P 600 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG P 79 CG CD NE CZ NH1 NH2 REMARK 470 ARG P 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS P 169 CG CD CE NZ REMARK 470 GLN P 170 CG CD OE1 NE2 REMARK 470 ASP P 173 CG OD1 OD2 REMARK 470 GLU P 175 CG CD OE1 OE2 REMARK 470 LYS P 186 CG CD CE NZ REMARK 470 LYS P 215 CG CD CE NZ REMARK 470 LYS P 248 CG CD CE NZ REMARK 470 GLU P 267 CG CD OE1 OE2 REMARK 470 GLU P 290 CG CD OE1 OE2 REMARK 470 LYS P 317 CG CD CE NZ REMARK 470 ARG P 396 CG CD NE CZ NH1 NH2 REMARK 470 GLN P 400 CG CD OE1 NE2 REMARK 470 GLU P 405 CG CD OE1 OE2 REMARK 470 ASP P 416 CG OD1 OD2 REMARK 470 LYS P 473 CG CD CE NZ REMARK 470 GLN P 479 CG CD OE1 NE2 REMARK 470 LYS P 485 CG CD CE NZ REMARK 470 GLU P 486 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP P 53 22.31 -164.17 REMARK 500 CYS P 69 64.22 69.67 REMARK 500 THR P 129 -80.15 -113.47 REMARK 500 VAL P 145 8.11 -67.77 REMARK 500 PRO P 160 -72.88 -60.13 REMARK 500 PRO P 172 126.01 -39.86 REMARK 500 ASP P 173 99.72 -59.06 REMARK 500 ALA P 174 -63.12 -13.97 REMARK 500 ARG P 185 -90.86 -80.74 REMARK 500 HIS P 204 -72.31 -39.70 REMARK 500 ASP P 249 25.34 48.73 REMARK 500 VAL P 271 137.03 -179.74 REMARK 500 LEU P 272 108.81 -52.38 REMARK 500 ILE P 279 72.29 -119.53 REMARK 500 PRO P 281 -100.82 -103.35 REMARK 500 SER P 283 -42.57 79.12 REMARK 500 GLU P 290 15.44 -66.63 REMARK 500 LEU P 294 -88.28 -62.07 REMARK 500 TYR P 348 -71.07 -55.05 REMARK 500 ASN P 410 98.09 -59.35 REMARK 500 PRO P 430 -150.64 -55.80 REMARK 500 ALA P 431 151.53 178.86 REMARK 500 ASN P 439 7.29 -150.21 REMARK 500 PRO P 583 172.63 -56.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BOG P 750 REMARK 610 BOG P 751 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM P 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS P 388 NE2 REMARK 620 2 HEM P 601 NA 77.7 REMARK 620 3 HEM P 601 NB 106.2 91.2 REMARK 620 4 HEM P 601 NC 117.5 163.7 89.9 REMARK 620 5 HEM P 601 ND 83.8 82.3 166.7 93.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PGG RELATED DB: PDB REMARK 900 INDOMETHACIN BOUND TO COX-1 (TRANS MODEL) REMARK 900 RELATED ID: 1PGF RELATED DB: PDB REMARK 900 INDOMETHACIN BOUND TO COX-1 REMARK 900 RELATED ID: 1CQE RELATED DB: PDB REMARK 900 FLURIBPROFEN BOUND TO COX-1 REMARK 900 RELATED ID: 1EQE RELATED DB: PDB REMARK 900 FLURBIPROFEN BOUND TO COX-1 (HIGHER RESOLUTION) REMARK 900 RELATED ID: 2OYE RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS A SEQUENCE CONFLICT IN UNP DATABASE AT RESIDUE 92 REMARK 999 (MET -> LEU). DBREF 2OYU P 1 600 UNP P05979 PGH1_SHEEP 1 600 SEQADV 2OYU LEU P 92 UNP P05979 MET 92 SEE REMARK 999 SEQRES 1 P 600 MET SER ARG GLN SER ILE SER LEU ARG PHE PRO LEU LEU SEQRES 2 P 600 LEU LEU LEU LEU SER PRO SER PRO VAL PHE SER ALA ASP SEQRES 3 P 600 PRO GLY ALA PRO ALA PRO VAL ASN PRO CYS CYS TYR TYR SEQRES 4 P 600 PRO CYS GLN HIS GLN GLY ILE CYS VAL ARG PHE GLY LEU SEQRES 5 P 600 ASP ARG TYR GLN CYS ASP CYS THR ARG THR GLY TYR SER SEQRES 6 P 600 GLY PRO ASN CYS THR ILE PRO GLU ILE TRP THR TRP LEU SEQRES 7 P 600 ARG THR THR LEU ARG PRO SER PRO SER PHE ILE HIS PHE SEQRES 8 P 600 LEU LEU THR HIS GLY ARG TRP LEU TRP ASP PHE VAL ASN SEQRES 9 P 600 ALA THR PHE ILE ARG ASP THR LEU MET ARG LEU VAL LEU SEQRES 10 P 600 THR VAL ARG SER ASN LEU ILE PRO SER PRO PRO THR TYR SEQRES 11 P 600 ASN ILE ALA HIS ASP TYR ILE SER TRP GLU SER PHE SER SEQRES 12 P 600 ASN VAL SER TYR TYR THR ARG ILE LEU PRO SER VAL PRO SEQRES 13 P 600 ARG ASP CYS PRO THR PRO MET GLY THR LYS GLY LYS LYS SEQRES 14 P 600 GLN LEU PRO ASP ALA GLU PHE LEU SER ARG ARG PHE LEU SEQRES 15 P 600 LEU ARG ARG LYS PHE ILE PRO ASP PRO GLN GLY THR ASN SEQRES 16 P 600 LEU MET PHE ALA PHE PHE ALA GLN HIS PHE THR HIS GLN SEQRES 17 P 600 PHE PHE LYS THR SER GLY LYS MET GLY PRO GLY PHE THR SEQRES 18 P 600 LYS ALA LEU GLY HIS GLY VAL ASP LEU GLY HIS ILE TYR SEQRES 19 P 600 GLY ASP ASN LEU GLU ARG GLN TYR GLN LEU ARG LEU PHE SEQRES 20 P 600 LYS ASP GLY LYS LEU LYS TYR GLN MET LEU ASN GLY GLU SEQRES 21 P 600 VAL TYR PRO PRO SER VAL GLU GLU ALA PRO VAL LEU MET SEQRES 22 P 600 HIS TYR PRO ARG GLY ILE PRO PRO GLN SER GLN MET ALA SEQRES 23 P 600 VAL GLY GLN GLU VAL PHE GLY LEU LEU PRO GLY LEU MET SEQRES 24 P 600 LEU TYR ALA THR ILE TRP LEU ARG GLU HIS ASN ARG VAL SEQRES 25 P 600 CYS ASP LEU LEU LYS ALA GLU HIS PRO THR TRP GLY ASP SEQRES 26 P 600 GLU GLN LEU PHE GLN THR ALA ARG LEU ILE LEU ILE GLY SEQRES 27 P 600 GLU THR ILE LYS ILE VAL ILE GLU GLU TYR VAL GLN GLN SEQRES 28 P 600 LEU SER GLY TYR PHE LEU GLN LEU LYS PHE ASP PRO GLU SEQRES 29 P 600 LEU LEU PHE GLY ALA GLN PHE GLN TYR ARG ASN ARG ILE SEQRES 30 P 600 ALA MET GLU PHE ASN GLN LEU TYR HIS TRP HIS PRO LEU SEQRES 31 P 600 MET PRO ASP SER PHE ARG VAL GLY PRO GLN ASP TYR SER SEQRES 32 P 600 TYR GLU GLN PHE LEU PHE ASN THR SER MET LEU VAL ASP SEQRES 33 P 600 TYR GLY VAL GLU ALA LEU VAL ASP ALA PHE SER ARG GLN SEQRES 34 P 600 PRO ALA GLY ARG ILE GLY GLY GLY ARG ASN ILE ASP HIS SEQRES 35 P 600 HIS ILE LEU HIS VAL ALA VAL ASP VAL ILE LYS GLU SER SEQRES 36 P 600 ARG VAL LEU ARG LEU GLN PRO PHE ASN GLU TYR ARG LYS SEQRES 37 P 600 ARG PHE GLY MET LYS PRO TYR THR SER PHE GLN GLU LEU SEQRES 38 P 600 THR GLY GLU LYS GLU MET ALA ALA GLU LEU GLU GLU LEU SEQRES 39 P 600 TYR GLY ASP ILE ASP ALA LEU GLU PHE TYR PRO GLY LEU SEQRES 40 P 600 LEU LEU GLU LYS CYS HIS PRO ASN SER ILE PHE GLY GLU SEQRES 41 P 600 SER MET ILE GLU MET GLY ALA PRO PHE SER LEU LYS GLY SEQRES 42 P 600 LEU LEU GLY ASN PRO ILE CYS SER PRO GLU TYR TRP LYS SEQRES 43 P 600 ALA SER THR PHE GLY GLY GLU VAL GLY PHE ASN LEU VAL SEQRES 44 P 600 LYS THR ALA THR LEU LYS LYS LEU VAL CYS LEU ASN THR SEQRES 45 P 600 LYS THR CYS PRO TYR VAL SER PHE HIS VAL PRO ASP PRO SEQRES 46 P 600 ARG GLN GLU ASP ARG PRO GLY VAL GLU ARG PRO PRO THR SEQRES 47 P 600 GLU LEU MODRES 2OYU ASN P 68 ASN GLYCOSYLATION SITE MODRES 2OYU ASN P 144 ASN GLYCOSYLATION SITE MODRES 2OYU ASN P 410 ASN GLYCOSYLATION SITE HET NAG A 1 14 HET NAG A 2 14 HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET NAG C 1 14 HET NAG C 2 14 HET BOG P 750 12 HET BOG P 751 12 HET IMS P 700 30 HET HEM P 601 43 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM BOG OCTYL BETA-D-GLUCOPYRANOSIDE HETNAM IMS 2-[1-(4-CHLOROBENZOYL)-5-METHOXY-2-METHYL-1H-INDOL-3- HETNAM 2 IMS YL]-N-[(1S)-1-(HYDROXYMETHYL)PROPYL]ACETAMIDE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BOG BETA-OCTYLGLUCOSIDE; OCTYL BETA-D-GLUCOSIDE; OCTYL D- HETSYN 2 BOG GLUCOSIDE; OCTYL GLUCOSIDE HETSYN HEM HEME FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 5 BOG 2(C14 H28 O6) FORMUL 7 IMS C23 H25 CL N2 O4 FORMUL 8 HEM C34 H32 FE N4 O4 FORMUL 9 HOH *52(H2 O) HELIX 1 1 ASN P 34 TYR P 39 5 6 HELIX 2 2 GLU P 73 ARG P 83 1 11 HELIX 3 3 SER P 85 THR P 94 1 10 HELIX 4 4 GLY P 96 THR P 106 1 11 HELIX 5 5 PHE P 107 ASN P 122 1 16 HELIX 6 6 SER P 138 ASN P 144 1 7 HELIX 7 7 ASP P 173 LEU P 182 1 10 HELIX 8 8 ASN P 195 HIS P 207 1 13 HELIX 9 9 ASN P 237 ARG P 245 1 9 HELIX 10 10 LEU P 295 HIS P 320 1 26 HELIX 11 11 GLY P 324 GLU P 347 1 24 HELIX 12 12 GLU P 347 GLY P 354 1 8 HELIX 13 13 ASP P 362 LEU P 366 5 5 HELIX 14 14 ALA P 378 TYR P 385 1 8 HELIX 15 15 HIS P 386 MET P 391 5 6 HELIX 16 16 SER P 403 LEU P 408 1 6 HELIX 17 17 SER P 412 GLY P 418 1 7 HELIX 18 18 GLY P 418 GLN P 429 1 12 HELIX 19 19 ILE P 444 LEU P 458 1 15 HELIX 20 20 PRO P 462 PHE P 470 1 9 HELIX 21 21 SER P 477 THR P 482 1 6 HELIX 22 22 GLU P 484 GLY P 496 1 13 HELIX 23 23 ASP P 497 LEU P 501 5 5 HELIX 24 24 GLU P 502 GLU P 510 1 9 HELIX 25 25 GLY P 519 GLY P 536 1 18 HELIX 26 26 ASN P 537 SER P 541 5 5 HELIX 27 27 ALA P 547 GLY P 551 5 5 HELIX 28 28 GLY P 552 THR P 561 1 10 HELIX 29 29 THR P 563 LEU P 570 1 8 SHEET 1 A 2 ILE P 46 PHE P 50 0 SHEET 2 A 2 ARG P 54 ASP P 58 -1 O ARG P 54 N PHE P 50 SHEET 1 B 2 TYR P 64 SER P 65 0 SHEET 2 B 2 ILE P 71 PRO P 72 -1 O ILE P 71 N SER P 65 SHEET 1 C 2 GLN P 255 LEU P 257 0 SHEET 2 C 2 GLU P 260 TYR P 262 -1 O TYR P 262 N GLN P 255 SHEET 1 D 2 PHE P 395 VAL P 397 0 SHEET 2 D 2 GLN P 400 TYR P 402 -1 O TYR P 402 N PHE P 395 SSBOND 1 CYS P 36 CYS P 47 1555 1555 2.10 SSBOND 2 CYS P 37 CYS P 159 1555 1555 2.05 SSBOND 3 CYS P 41 CYS P 57 1555 1555 2.03 SSBOND 4 CYS P 59 CYS P 69 1555 1555 2.05 SSBOND 5 CYS P 569 CYS P 575 1555 1555 2.06 LINK ND2 ASN P 68 C1 NAG A 1 1555 1555 1.45 LINK ND2 ASN P 144 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN P 410 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.46 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.48 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.46 LINK NE2 HIS P 388 FE HEM P 601 1555 1555 2.47 CISPEP 1 SER P 126 PRO P 127 0 -2.74 CRYST1 181.410 181.410 103.398 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005512 0.003183 0.000000 0.00000 SCALE2 0.000000 0.006365 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009671 0.00000