HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-MAR-07 2P1G TITLE CRYSTAL STRUCTURE OF A PUTATIVE XYLANASE FROM BACTEROIDES FRAGILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE XYLANASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 295405; SOURCE 4 STRAIN: YCH46; SOURCE 5 GENE: BF2036; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,J.FREEMAN,K.T.BAIN,F.ZHANG,V.SRIDHAR,D.SMITH,S.WASSERMAN, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 8 21-FEB-24 2P1G 1 REMARK REVDAT 7 03-FEB-21 2P1G 1 AUTHOR JRNL SEQADV REVDAT 6 14-NOV-18 2P1G 1 AUTHOR REVDAT 5 18-OCT-17 2P1G 1 REMARK REVDAT 4 24-OCT-12 2P1G 1 AUTHOR REVDAT 3 13-JUL-11 2P1G 1 VERSN REVDAT 2 24-FEB-09 2P1G 1 VERSN REVDAT 1 20-MAR-07 2P1G 0 JRNL AUTH J.B.BONANNO,J.FREEMAN,K.T.BAIN,F.ZHANG,V.SRIDHAR,D.SMITH, JRNL AUTH 2 S.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE XYLANASE FROM BACTEROIDES JRNL TITL 2 FRAGILIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 44325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2229 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3051 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 175 REMARK 3 BIN FREE R VALUE : 0.2240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3601 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 519 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.41000 REMARK 3 B22 (A**2) : -0.34000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.49000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.347 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3670 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4960 ; 1.282 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 458 ; 5.387 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 159 ;32.376 ;24.843 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 675 ;12.272 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.625 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 560 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2714 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1618 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2509 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 400 ; 0.203 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.277 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.293 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2366 ; 0.946 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3673 ; 1.470 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1501 ; 2.639 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1286 ; 4.043 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2P1G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44349 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 22.011 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.15700 REMARK 200 R SYM (I) : 0.15700 REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.36800 REMARK 200 R SYM FOR SHELL (I) : 0.36800 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BIS-TRIS PH 6.5, 28% PEG MME REMARK 280 2000, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.91500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN SHOWN IN REMARK 350 IS REMARK 300 PROBABLE. IT IS PREDICTED BY THE ANALYSIS OF PROTEIN REMARK 300 INTERFACES BASED ON THIS CRYSTAL STRUCTURE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 18 REMARK 465 SER A 19 REMARK 465 LEU A 20 REMARK 465 GLN A 21 REMARK 465 GLU A 22 REMARK 465 SER A 23 REMARK 465 SER A 24 REMARK 465 LEU A 25 REMARK 465 GLY A 77 REMARK 465 ASP A 78 REMARK 465 LYS A 257 REMARK 465 LYS A 258 REMARK 465 GLU A 259 REMARK 465 GLY A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 MET B 18 REMARK 465 SER B 19 REMARK 465 LEU B 20 REMARK 465 GLN B 21 REMARK 465 GLU B 22 REMARK 465 SER B 23 REMARK 465 SER B 24 REMARK 465 LEU B 25 REMARK 465 VAL B 26 REMARK 465 LYS B 257 REMARK 465 LYS B 258 REMARK 465 GLU B 259 REMARK 465 GLY B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 465 HIS B 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 269 O HOH A 504 1.23 REMARK 500 O HOH A 268 O HOH A 510 1.35 REMARK 500 O HOH A 316 O HOH A 490 1.69 REMARK 500 O HOH A 293 O HOH A 497 1.88 REMARK 500 O HOH B 350 O HOH B 514 1.99 REMARK 500 O HOH B 382 O HOH B 513 2.14 REMARK 500 SG CYS A 60 O HOH A 358 2.17 REMARK 500 OE2 GLU B 44 NH2 ARG B 105 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 SD MET B 70 O HOH A 326 2746 2.08 REMARK 500 CG MET B 70 O HOH A 326 2746 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 105 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 105 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 205 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 105 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 105 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 35 -4.24 84.27 REMARK 500 ASP A 100 67.15 -152.91 REMARK 500 SER A 139 -2.40 -168.40 REMARK 500 ASP B 35 -9.43 87.98 REMARK 500 ASP B 100 76.41 -154.25 REMARK 500 SER B 139 1.07 -167.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10224C RELATED DB: TARGETDB DBREF 2P1G A 21 258 UNP Q64UP6 Q64UP6_BACFR 21 258 DBREF 2P1G B 21 258 UNP Q64UP6 Q64UP6_BACFR 21 258 SEQADV 2P1G MET A 18 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G SER A 19 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G LEU A 20 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G GLU A 259 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G GLY A 260 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS A 261 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS A 262 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS A 263 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS A 264 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS A 265 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS A 266 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G MET B 18 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G SER B 19 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G LEU B 20 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G GLU B 259 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G GLY B 260 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS B 261 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS B 262 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS B 263 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS B 264 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS B 265 UNP Q64UP6 CLONING ARTIFACT SEQADV 2P1G HIS B 266 UNP Q64UP6 CLONING ARTIFACT SEQRES 1 A 249 MET SER LEU GLN GLU SER SER LEU VAL LEU SER ASN GLY SEQRES 2 A 249 LEU GLY PHE VAL ASP THR PRO TYR LYS ALA GLY THR LEU SEQRES 3 A 249 GLU VAL ASP ASP THR GLU ASP LEU ILE ILE ASN CYS ASP SEQRES 4 A 249 GLU VAL ASP CYS THR THR PHE VAL GLU TYR ALA LEU ALA SEQRES 5 A 249 MET ALA LEU CYS PRO GLN GLN GLY ASP GLU MET GLN GLU SEQRES 6 A 249 GLY ASP PHE ALA ARG ASN LEU GLN ARG ILE ARG TYR ARG SEQRES 7 A 249 ASP GLY LYS ILE ASP GLY TYR THR SER ARG LEU HIS TYR SEQRES 8 A 249 ILE SER ASP TRP ILE ASN ASN ALA VAL ARG GLN GLY LEU SEQRES 9 A 249 LEU GLU ASP VAL THR ALA ALA TYR SER PRO PHE LYS GLN SEQRES 10 A 249 LYS LEU SER LEU SER TYR MET SER THR HIS PRO GLU LEU SEQRES 11 A 249 TYR LYS SER LEU LYS ASN SER PRO GLU ASN VAL ALA GLN SEQRES 12 A 249 MET ALA LYS TYR GLU LYS ALA LEU SER GLY LYS GLU VAL SEQRES 13 A 249 HIS TYR LEU PRO LYS ASP LYS LEU GLU PRO ASP GLY LEU SEQRES 14 A 249 PRO TRP ILE LYS ASN GLY ASP ILE ILE ALA LEU THR THR SEQRES 15 A 249 ASN THR PRO GLY LEU ASP VAL SER HIS MET GLY ILE ALA SEQRES 16 A 249 ILE TYR ILE LYS GLY GLN LEU HIS LEU LEU HIS ALA SER SEQRES 17 A 249 SER LYS GLU GLY LYS VAL VAL VAL GLY LYS THR ALA LEU SEQRES 18 A 249 SER GLN MET LEU LYS ASP ARG LYS SER LEU THR GLY ILE SEQRES 19 A 249 ARG VAL LEU ARG MET LYS LYS GLU GLY HIS HIS HIS HIS SEQRES 20 A 249 HIS HIS SEQRES 1 B 249 MET SER LEU GLN GLU SER SER LEU VAL LEU SER ASN GLY SEQRES 2 B 249 LEU GLY PHE VAL ASP THR PRO TYR LYS ALA GLY THR LEU SEQRES 3 B 249 GLU VAL ASP ASP THR GLU ASP LEU ILE ILE ASN CYS ASP SEQRES 4 B 249 GLU VAL ASP CYS THR THR PHE VAL GLU TYR ALA LEU ALA SEQRES 5 B 249 MET ALA LEU CYS PRO GLN GLN GLY ASP GLU MET GLN GLU SEQRES 6 B 249 GLY ASP PHE ALA ARG ASN LEU GLN ARG ILE ARG TYR ARG SEQRES 7 B 249 ASP GLY LYS ILE ASP GLY TYR THR SER ARG LEU HIS TYR SEQRES 8 B 249 ILE SER ASP TRP ILE ASN ASN ALA VAL ARG GLN GLY LEU SEQRES 9 B 249 LEU GLU ASP VAL THR ALA ALA TYR SER PRO PHE LYS GLN SEQRES 10 B 249 LYS LEU SER LEU SER TYR MET SER THR HIS PRO GLU LEU SEQRES 11 B 249 TYR LYS SER LEU LYS ASN SER PRO GLU ASN VAL ALA GLN SEQRES 12 B 249 MET ALA LYS TYR GLU LYS ALA LEU SER GLY LYS GLU VAL SEQRES 13 B 249 HIS TYR LEU PRO LYS ASP LYS LEU GLU PRO ASP GLY LEU SEQRES 14 B 249 PRO TRP ILE LYS ASN GLY ASP ILE ILE ALA LEU THR THR SEQRES 15 B 249 ASN THR PRO GLY LEU ASP VAL SER HIS MET GLY ILE ALA SEQRES 16 B 249 ILE TYR ILE LYS GLY GLN LEU HIS LEU LEU HIS ALA SER SEQRES 17 B 249 SER LYS GLU GLY LYS VAL VAL VAL GLY LYS THR ALA LEU SEQRES 18 B 249 SER GLN MET LEU LYS ASP ARG LYS SER LEU THR GLY ILE SEQRES 19 B 249 ARG VAL LEU ARG MET LYS LYS GLU GLY HIS HIS HIS HIS SEQRES 20 B 249 HIS HIS FORMUL 3 HOH *519(H2 O) HELIX 1 1 VAL A 26 GLY A 32 1 7 HELIX 2 2 ASP A 59 LEU A 72 1 14 HELIX 3 3 GLN A 81 TYR A 94 1 14 HELIX 4 4 ARG A 95 LYS A 98 5 4 HELIX 5 5 GLY A 101 ARG A 105 5 5 HELIX 6 6 TYR A 108 GLN A 119 1 12 HELIX 7 7 VAL A 125 SER A 130 1 6 HELIX 8 8 SER A 139 HIS A 144 1 6 HELIX 9 9 PRO A 145 TYR A 148 5 4 HELIX 10 10 SER A 154 SER A 169 1 16 HELIX 11 11 ASP A 179 LEU A 181 5 3 HELIX 12 12 ALA A 237 ASP A 244 1 8 HELIX 13 13 LEU B 27 GLY B 32 1 6 HELIX 14 14 GLY B 41 VAL B 45 5 5 HELIX 15 15 ASP B 59 LEU B 72 1 14 HELIX 16 16 GLN B 76 MET B 80 5 5 HELIX 17 17 GLY B 83 TYR B 94 1 12 HELIX 18 18 ARG B 95 LYS B 98 5 4 HELIX 19 19 GLY B 101 ARG B 105 5 5 HELIX 20 20 TYR B 108 GLN B 119 1 12 HELIX 21 21 VAL B 125 SER B 130 1 6 HELIX 22 22 SER B 139 HIS B 144 1 6 HELIX 23 23 PRO B 145 TYR B 148 5 4 HELIX 24 24 SER B 154 SER B 169 1 16 HELIX 25 25 ASP B 179 LEU B 181 5 3 HELIX 26 26 ALA B 237 ARG B 245 1 9 SHEET 1 A 3 GLU A 123 ASP A 124 0 SHEET 2 A 3 LEU A 248 ARG A 255 -1 O ARG A 255 N GLU A 123 SHEET 3 A 3 LEU A 176 PRO A 177 -1 N LEU A 176 O ILE A 251 SHEET 1 B 6 GLU A 123 ASP A 124 0 SHEET 2 B 6 LEU A 248 ARG A 255 -1 O ARG A 255 N GLU A 123 SHEET 3 B 6 ILE A 194 THR A 199 -1 N ILE A 194 O LEU A 254 SHEET 4 B 6 VAL A 206 ILE A 215 -1 O GLY A 210 N ILE A 195 SHEET 5 B 6 GLN A 218 SER A 225 -1 O LEU A 222 N ILE A 211 SHEET 6 B 6 LYS A 230 VAL A 233 -1 O VAL A 232 N HIS A 223 SHEET 1 C 2 LYS A 133 LYS A 135 0 SHEET 2 C 2 GLU A 172 HIS A 174 -1 O VAL A 173 N GLN A 134 SHEET 1 D 3 GLU B 123 ASP B 124 0 SHEET 2 D 3 LEU B 248 ARG B 255 -1 O ARG B 255 N GLU B 123 SHEET 3 D 3 LEU B 176 PRO B 177 -1 N LEU B 176 O ILE B 251 SHEET 1 E 6 GLU B 123 ASP B 124 0 SHEET 2 E 6 LEU B 248 ARG B 255 -1 O ARG B 255 N GLU B 123 SHEET 3 E 6 ILE B 194 THR B 199 -1 N ILE B 194 O LEU B 254 SHEET 4 E 6 VAL B 206 ILE B 215 -1 O HIS B 208 N LEU B 197 SHEET 5 E 6 GLN B 218 SER B 225 -1 O LEU B 222 N ILE B 211 SHEET 6 E 6 LYS B 230 VAL B 233 -1 O VAL B 232 N HIS B 223 SHEET 1 F 2 LYS B 133 LYS B 135 0 SHEET 2 F 2 GLU B 172 HIS B 174 -1 O VAL B 173 N GLN B 134 CRYST1 51.645 65.830 74.061 90.00 103.84 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019363 0.000000 0.004771 0.00000 SCALE2 0.000000 0.015191 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013906 0.00000