HEADER OXIDOREDUCTASE 15-MAR-07 2P5N TITLE CRYSTAL STRUCTURE OF MOUSE 17-ALPHA HYDROXYSTEROID DEHYDROGENASE IN TITLE 2 COMPLEX WITH COENZYME NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDO-KETO REDUCTASE FAMILY 1, MEMBER C21; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 17-ALPHA HYDROXYSTEROID DEHYDROGENASE, AKR1C21; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AKR1C21; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PKK223-3 KEYWDS ALDO-KETO REDUCTASE, HYDROXYSTEROID DEHYDROGENASE, BINARY COMPLEX, KEYWDS 2 TIM BARREL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR O.EL-KABBANI,U.DHAGAT REVDAT 4 25-OCT-23 2P5N 1 REMARK REVDAT 3 20-NOV-13 2P5N 1 FORMUL HETATM HETNAM HETSYN REVDAT 3 2 1 VERSN REVDAT 2 24-FEB-09 2P5N 1 VERSN REVDAT 1 09-OCT-07 2P5N 0 JRNL AUTH U.DHAGAT,V.CARBONE,R.P.CHUNG,C.SCHULZE-BRIESE,S.ENDO,A.HARA, JRNL AUTH 2 O.EL-KABBANI JRNL TITL STRUCTURE OF 3(17)ALPHA-HYDROXYSTEROID DEHYDROGENASE JRNL TITL 2 (AKR1C21) HOLOENZYME FROM AN ORTHORHOMBIC CRYSTAL FORM: AN JRNL TITL 3 INSIGHT INTO THE BIFUNCTIONALITY OF THE ENZYME. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 63 825 2007 JRNL REFN ESSN 1744-3091 JRNL PMID 17909281 JRNL DOI 10.1107/S1744309107040985 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 55952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3604 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 227 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5184 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 112 REMARK 3 SOLVENT ATOMS : 569 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.91000 REMARK 3 B22 (A**2) : -2.10000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.159 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.164 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.341 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5452 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7406 ; 1.873 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 654 ; 8.981 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 246 ;37.147 ;24.390 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 960 ;15.866 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;19.047 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 810 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4070 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2708 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3749 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 481 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.202 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3350 ; 0.996 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5247 ; 1.523 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2427 ; 2.435 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2154 ; 3.478 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 323 4 REMARK 3 1 B 1 B 323 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2569 ; 0.39 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2569 ; 1.63 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2P5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000041996. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00002 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.47500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1MRQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10% PEG 6000, 5% 2-METHYL REMARK 280 -2,4-PENTANEDIOL, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.45500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.91500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.91500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.45500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 263 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 263 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 119 27.98 -74.89 REMARK 500 PHE A 129 73.30 -119.59 REMARK 500 MET A 175 -61.75 -27.39 REMARK 500 LEU A 197 78.31 -150.58 REMARK 500 THR A 221 158.69 71.34 REMARK 500 TYR A 224 130.53 -30.66 REMARK 500 ASP A 229 107.85 -46.47 REMARK 500 ARG A 250 -155.87 -132.37 REMARK 500 ARG A 301 14.86 -142.77 REMARK 500 ASP A 321 153.39 -47.21 REMARK 500 PRO B 119 30.95 -77.51 REMARK 500 THR B 221 160.00 70.45 REMARK 500 GLN B 222 8.03 -69.48 REMARK 500 ARG B 250 -149.33 -126.26 REMARK 500 ARG B 301 20.39 -147.24 REMARK 500 ILE B 306 78.50 -117.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 225 GLY A 226 -30.52 REMARK 500 MET B 1 ASN B 2 149.21 REMARK 500 TYR B 110 VAL B 111 143.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1350 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 2350 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 2001 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS A DIFFERENCE BETWEEN THE SEQRES AND THE SEQUENCE REMARK 999 DATABASE. THIS IS A VARIANT. DBREF 2P5N A 1 323 UNP Q6P8V0 Q6P8V0_MOUSE 1 323 DBREF 2P5N B 1 323 UNP Q6P8V0 Q6P8V0_MOUSE 1 323 SEQADV 2P5N LYS A 294 UNP Q6P8V0 GLU 294 SEE REMARK 999 SEQADV 2P5N LYS B 294 UNP Q6P8V0 GLU 294 SEE REMARK 999 SEQRES 1 A 323 MET ASN SER LYS CYS HIS CYS VAL ILE LEU ASN ASP GLY SEQRES 2 A 323 ASN PHE ILE PRO VAL LEU GLY PHE GLY THR ALA LEU PRO SEQRES 3 A 323 LEU GLU CYS PRO LYS SER LYS ALA LYS GLU LEU THR LYS SEQRES 4 A 323 ILE ALA ILE ASP ALA GLY PHE HIS HIS PHE ASP SER ALA SEQRES 5 A 323 SER VAL TYR ASN THR GLU ASP HIS VAL GLY GLU ALA ILE SEQRES 6 A 323 ARG SER LYS ILE ALA ASP GLY THR VAL ARG ARG GLU ASP SEQRES 7 A 323 ILE PHE TYR THR SER LYS VAL TRP CYS THR SER LEU HIS SEQRES 8 A 323 PRO GLU LEU VAL ARG ALA SER LEU GLU ARG SER LEU GLN SEQRES 9 A 323 LYS LEU GLN PHE ASP TYR VAL ASP LEU TYR LEU ILE HIS SEQRES 10 A 323 TYR PRO MET ALA LEU LYS PRO GLY GLU GLU ASN PHE PRO SEQRES 11 A 323 VAL ASP GLU HIS GLY LYS LEU ILE PHE ASP ARG VAL ASP SEQRES 12 A 323 LEU CYS ALA THR TRP GLU ALA MET GLU LYS CYS LYS ASP SEQRES 13 A 323 ALA GLY LEU THR LYS SER ILE GLY VAL SER ASN PHE ASN SEQRES 14 A 323 TYR ARG GLN LEU GLU MET ILE LEU ASN LYS PRO GLY LEU SEQRES 15 A 323 LYS TYR LYS PRO VAL CYS ASN GLN VAL GLU CYS HIS PRO SEQRES 16 A 323 TYR LEU ASN GLN MET LYS LEU LEU ASP PHE CYS LYS SER SEQRES 17 A 323 LYS ASP ILE VAL LEU VAL ALA TYR GLY VAL LEU GLY THR SEQRES 18 A 323 GLN ARG TYR GLY GLY TRP VAL ASP GLN ASN SER PRO VAL SEQRES 19 A 323 LEU LEU ASP GLU PRO VAL LEU GLY SER MET ALA LYS LYS SEQRES 20 A 323 TYR ASN ARG THR PRO ALA LEU ILE ALA LEU ARG TYR GLN SEQRES 21 A 323 LEU GLN ARG GLY ILE VAL VAL LEU ASN THR SER LEU LYS SEQRES 22 A 323 GLU GLU ARG ILE LYS GLU ASN MET GLN VAL PHE GLU PHE SEQRES 23 A 323 GLN LEU SER SER GLU ASP MET LYS VAL LEU ASP GLY LEU SEQRES 24 A 323 ASN ARG ASN MET ARG TYR ILE PRO ALA ALA ILE PHE LYS SEQRES 25 A 323 GLY HIS PRO ASN TRP PRO PHE LEU ASP GLU TYR SEQRES 1 B 323 MET ASN SER LYS CYS HIS CYS VAL ILE LEU ASN ASP GLY SEQRES 2 B 323 ASN PHE ILE PRO VAL LEU GLY PHE GLY THR ALA LEU PRO SEQRES 3 B 323 LEU GLU CYS PRO LYS SER LYS ALA LYS GLU LEU THR LYS SEQRES 4 B 323 ILE ALA ILE ASP ALA GLY PHE HIS HIS PHE ASP SER ALA SEQRES 5 B 323 SER VAL TYR ASN THR GLU ASP HIS VAL GLY GLU ALA ILE SEQRES 6 B 323 ARG SER LYS ILE ALA ASP GLY THR VAL ARG ARG GLU ASP SEQRES 7 B 323 ILE PHE TYR THR SER LYS VAL TRP CYS THR SER LEU HIS SEQRES 8 B 323 PRO GLU LEU VAL ARG ALA SER LEU GLU ARG SER LEU GLN SEQRES 9 B 323 LYS LEU GLN PHE ASP TYR VAL ASP LEU TYR LEU ILE HIS SEQRES 10 B 323 TYR PRO MET ALA LEU LYS PRO GLY GLU GLU ASN PHE PRO SEQRES 11 B 323 VAL ASP GLU HIS GLY LYS LEU ILE PHE ASP ARG VAL ASP SEQRES 12 B 323 LEU CYS ALA THR TRP GLU ALA MET GLU LYS CYS LYS ASP SEQRES 13 B 323 ALA GLY LEU THR LYS SER ILE GLY VAL SER ASN PHE ASN SEQRES 14 B 323 TYR ARG GLN LEU GLU MET ILE LEU ASN LYS PRO GLY LEU SEQRES 15 B 323 LYS TYR LYS PRO VAL CYS ASN GLN VAL GLU CYS HIS PRO SEQRES 16 B 323 TYR LEU ASN GLN MET LYS LEU LEU ASP PHE CYS LYS SER SEQRES 17 B 323 LYS ASP ILE VAL LEU VAL ALA TYR GLY VAL LEU GLY THR SEQRES 18 B 323 GLN ARG TYR GLY GLY TRP VAL ASP GLN ASN SER PRO VAL SEQRES 19 B 323 LEU LEU ASP GLU PRO VAL LEU GLY SER MET ALA LYS LYS SEQRES 20 B 323 TYR ASN ARG THR PRO ALA LEU ILE ALA LEU ARG TYR GLN SEQRES 21 B 323 LEU GLN ARG GLY ILE VAL VAL LEU ASN THR SER LEU LYS SEQRES 22 B 323 GLU GLU ARG ILE LYS GLU ASN MET GLN VAL PHE GLU PHE SEQRES 23 B 323 GLN LEU SER SER GLU ASP MET LYS VAL LEU ASP GLY LEU SEQRES 24 B 323 ASN ARG ASN MET ARG TYR ILE PRO ALA ALA ILE PHE LYS SEQRES 25 B 323 GLY HIS PRO ASN TRP PRO PHE LEU ASP GLU TYR HET NDP A1350 48 HET MPD A1001 8 HET NDP B2350 48 HET MPD B2001 8 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 MPD 2(C6 H14 O2) FORMUL 7 HOH *569(H2 O) HELIX 1 1 SER A 32 GLY A 45 1 14 HELIX 2 2 ALA A 52 ASN A 56 5 5 HELIX 3 3 THR A 57 ASP A 71 1 15 HELIX 4 4 ARG A 75 ILE A 79 5 5 HELIX 5 5 TRP A 86 LEU A 90 5 5 HELIX 6 6 HIS A 91 GLN A 107 1 17 HELIX 7 7 ASP A 143 ALA A 157 1 15 HELIX 8 8 ASN A 169 ASN A 178 1 10 HELIX 9 9 GLN A 199 LYS A 209 1 11 HELIX 10 10 VAL A 234 ASP A 237 5 4 HELIX 11 11 GLU A 238 ASN A 249 1 12 HELIX 12 12 THR A 251 GLN A 262 1 12 HELIX 13 13 LYS A 273 ASN A 280 1 8 HELIX 14 14 MET A 281 PHE A 286 5 6 HELIX 15 15 SER A 289 GLY A 298 1 10 HELIX 16 16 ALA A 308 LYS A 312 5 5 HELIX 17 17 SER B 32 ALA B 44 1 13 HELIX 18 18 ALA B 52 ASN B 56 5 5 HELIX 19 19 THR B 57 ASP B 71 1 15 HELIX 20 20 ARG B 75 ILE B 79 5 5 HELIX 21 21 TRP B 86 LEU B 90 5 5 HELIX 22 22 HIS B 91 GLN B 107 1 17 HELIX 23 23 ASP B 143 ALA B 157 1 15 HELIX 24 24 ASN B 169 ASN B 178 1 10 HELIX 25 25 GLN B 199 LYS B 209 1 11 HELIX 26 26 VAL B 234 ASP B 237 5 4 HELIX 27 27 GLU B 238 TYR B 248 1 11 HELIX 28 28 THR B 251 GLN B 262 1 12 HELIX 29 29 LYS B 273 MET B 281 1 9 HELIX 30 30 GLN B 282 PHE B 286 5 5 HELIX 31 31 SER B 289 GLY B 298 1 10 HELIX 32 32 ALA B 308 LYS B 312 5 5 SHEET 1 A 2 CYS A 7 ILE A 9 0 SHEET 2 A 2 PHE A 15 PRO A 17 -1 O ILE A 16 N VAL A 8 SHEET 1 B 9 LEU A 19 GLY A 22 0 SHEET 2 B 9 HIS A 48 ASP A 50 1 O HIS A 48 N PHE A 21 SHEET 3 B 9 PHE A 80 VAL A 85 1 O PHE A 80 N PHE A 49 SHEET 4 B 9 VAL A 111 ILE A 116 1 O LEU A 115 N VAL A 85 SHEET 5 B 9 THR A 160 SER A 166 1 O GLY A 164 N TYR A 114 SHEET 6 B 9 CYS A 188 GLU A 192 1 O CYS A 188 N VAL A 165 SHEET 7 B 9 VAL A 212 TYR A 216 1 O VAL A 214 N VAL A 191 SHEET 8 B 9 VAL A 266 ASN A 269 1 O VAL A 266 N ALA A 215 SHEET 9 B 9 LEU A 19 GLY A 22 1 N GLY A 20 O VAL A 267 SHEET 1 C 2 CYS B 7 ILE B 9 0 SHEET 2 C 2 PHE B 15 PRO B 17 -1 O ILE B 16 N VAL B 8 SHEET 1 D 9 LEU B 19 GLY B 22 0 SHEET 2 D 9 HIS B 48 ASP B 50 1 O HIS B 48 N PHE B 21 SHEET 3 D 9 PHE B 80 VAL B 85 1 O THR B 82 N PHE B 49 SHEET 4 D 9 VAL B 111 ILE B 116 1 O LEU B 113 N SER B 83 SHEET 5 D 9 THR B 160 SER B 166 1 O GLY B 164 N TYR B 114 SHEET 6 D 9 CYS B 188 GLU B 192 1 O CYS B 188 N VAL B 165 SHEET 7 D 9 VAL B 212 TYR B 216 1 O VAL B 212 N ASN B 189 SHEET 8 D 9 VAL B 266 ASN B 269 1 O VAL B 266 N ALA B 215 SHEET 9 D 9 LEU B 19 GLY B 22 1 N GLY B 22 O ASN B 269 SSBOND 1 CYS A 5 CYS A 7 1555 1555 2.00 SSBOND 2 CYS B 5 CYS B 7 1555 1555 2.03 SITE 1 AC1 33 GLY A 22 THR A 23 ALA A 24 ASP A 50 SITE 2 AC1 33 TYR A 55 HIS A 117 SER A 166 ASN A 167 SITE 3 AC1 33 GLN A 190 TYR A 216 GLY A 217 VAL A 218 SITE 4 AC1 33 LEU A 219 GLY A 220 THR A 221 GLN A 222 SITE 5 AC1 33 TYR A 224 ALA A 253 ASN A 269 THR A 270 SITE 6 AC1 33 SER A 271 LEU A 272 LYS A 273 ARG A 276 SITE 7 AC1 33 GLU A 279 ASN A 280 MPD A1001 HOH A1354 SITE 8 AC1 33 HOH A1394 HOH A1395 HOH A1426 HOH A1476 SITE 9 AC1 33 HOH A1556 SITE 1 AC2 35 GLY B 22 THR B 23 ALA B 24 ASP B 50 SITE 2 AC2 35 TYR B 55 LYS B 84 HIS B 117 SER B 166 SITE 3 AC2 35 ASN B 167 GLN B 190 TYR B 216 GLY B 217 SITE 4 AC2 35 VAL B 218 LEU B 219 GLY B 220 THR B 221 SITE 5 AC2 35 GLN B 222 TYR B 224 LEU B 236 ALA B 253 SITE 6 AC2 35 ASN B 269 THR B 270 SER B 271 LEU B 272 SITE 7 AC2 35 LYS B 273 ARG B 276 GLU B 279 ASN B 280 SITE 8 AC2 35 HOH B2354 HOH B2391 HOH B2403 HOH B2411 SITE 9 AC2 35 HOH B2425 HOH B2426 HOH B2443 SITE 1 AC3 5 TYR A 55 TYR A 224 TRP A 227 NDP A1350 SITE 2 AC3 5 HOH A1476 SITE 1 AC4 4 TYR B 55 TYR B 224 TRP B 227 HOH B2391 CRYST1 84.910 84.900 95.830 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011777 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010435 0.00000