HEADER ISOMERASE 16-MAR-07 2P5Y TITLE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS HB8 UDP-GLUCOSE 4-EPIMERASE TITLE 2 COMPLEX WITH NAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-GLUCOSE 4-EPIMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.1.3.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB8; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8, DSM 579; SOURCE 5 ATCC: 27634; SOURCE 6 GENE: TTHA0591; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS TTHA0591, STRUCTURAL GENOMICS, UDP-GLUCOSE 4-EPIMERASE, THERMUS KEYWDS 2 THERMOPHILUS HB8, PSI, PROTEIN STRUCTURE INITIATIVE, SOUTHEAST KEYWDS 3 COLLABORATORY FOR STRUCTURAL GENOMICS, SECSG, NPPSFA, NATIONAL KEYWDS 4 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 5 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.-Q.FU,L.CHEN,A.EBIHARA,A.SHINKAI,S.KURAMITSU,S.YOKOYAMA,J.ZHU, AUTHOR 2 J.T.SWINDELL,J.CHRZAS,J.P.ROSE,B.-C.WANG,SOUTHEAST COLLABORATORY FOR AUTHOR 3 STRUCTURAL GENOMICS (SECSG),RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 4 INITIATIVE (RSGI) REVDAT 5 30-AUG-23 2P5Y 1 REMARK REVDAT 4 24-JAN-18 2P5Y 1 AUTHOR JRNL REVDAT 3 18-OCT-17 2P5Y 1 REMARK REVDAT 2 24-FEB-09 2P5Y 1 VERSN REVDAT 1 17-APR-07 2P5Y 0 JRNL AUTH Z.-Q.FU,L.CHEN,A.EBIHARA,A.SHINKAI,S.KURAMITSU,S.YOKOYAMA, JRNL AUTH 2 J.ZHU,J.T.SWINDELL,J.CHRZAS,J.P.ROSE,B.-C.WANG JRNL TITL CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS HB8 UDP-GLUCOSE JRNL TITL 2 4-EPIMERASE COMPLEX WITH NAD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1673 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2260 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.2520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2387 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 217 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.298 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2493 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3393 ; 1.282 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 310 ; 5.335 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;36.207 ;22.727 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;13.564 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.544 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 367 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1923 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1193 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1687 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 214 ; 0.141 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.168 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.112 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1583 ; 0.890 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2462 ; 1.343 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1028 ; 2.193 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 931 ; 3.557 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2P5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000042007. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97928 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33164 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 42.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 41.40 REMARK 200 R MERGE FOR SHELL (I) : 0.31200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 2P5U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: USING 1 MICROLITER DROPS CONTAINING REMARK 280 EQUAL VOLUMES OF PROTEIN CONCENTRATE (11.71 MG/ML) AND RESERVOIR REMARK 280 SOLUTION CONTAINING 1.0M MAGNESIUM SULFATE, 0.1M SODIUM CITRATE, REMARK 280 PH 5.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 67.83350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.83350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 67.83350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.83350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 67.83350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 67.83350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 67.83350 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 67.83350 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 67.83350 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 67.83350 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 67.83350 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 67.83350 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 67.83350 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 67.83350 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 67.83350 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 67.83350 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 67.83350 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 67.83350 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 101.75025 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 33.91675 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 33.91675 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 101.75025 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 101.75025 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 101.75025 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 33.91675 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 33.91675 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 101.75025 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 33.91675 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 101.75025 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 33.91675 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 101.75025 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 33.91675 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 33.91675 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 33.91675 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 101.75025 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 33.91675 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 101.75025 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 101.75025 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 101.75025 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 33.91675 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 33.91675 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 101.75025 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 101.75025 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 33.91675 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 33.91675 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 33.91675 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 33.91675 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 101.75025 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 33.91675 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 101.75025 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 33.91675 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 101.75025 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 101.75025 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 101.75025 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1175 O HOH A 1269 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 116 -167.37 -103.54 REMARK 500 ARG A 177 -0.71 81.91 REMARK 500 LYS A 206 -41.27 -135.18 REMARK 500 ASP A 210 -176.13 -68.09 REMARK 500 SER A 233 -7.68 -144.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 1118 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000522.2 RELATED DB: TARGETDB REMARK 900 MONOMERIC FORM OF TTK003000522 DBREF 2P5Y A 1 311 UNP Q5SKQ2 Q5SKQ2_THET8 1 311 SEQRES 1 A 311 MET ARG VAL LEU VAL THR GLY GLY ALA GLY PHE ILE GLY SEQRES 2 A 311 SER HIS ILE VAL GLU ASP LEU LEU ALA ARG GLY LEU GLU SEQRES 3 A 311 VAL ALA VAL LEU ASP ASN LEU ALA THR GLY LYS ARG GLU SEQRES 4 A 311 ASN VAL PRO LYS GLY VAL PRO PHE PHE ARG VAL ASP LEU SEQRES 5 A 311 ARG ASP LYS GLU GLY VAL GLU ARG ALA PHE ARG GLU PHE SEQRES 6 A 311 ARG PRO THR HIS VAL SER HIS GLN ALA ALA GLN ALA SER SEQRES 7 A 311 VAL LYS VAL SER VAL GLU ASP PRO VAL LEU ASP PHE GLU SEQRES 8 A 311 VAL ASN LEU LEU GLY GLY LEU ASN LEU LEU GLU ALA CYS SEQRES 9 A 311 ARG GLN TYR GLY VAL GLU LYS LEU VAL PHE ALA SER THR SEQRES 10 A 311 GLY GLY ALA ILE TYR GLY GLU VAL PRO GLU GLY GLU ARG SEQRES 11 A 311 ALA GLU GLU THR TRP PRO PRO ARG PRO LYS SER PRO TYR SEQRES 12 A 311 ALA ALA SER LYS ALA ALA PHE GLU HIS TYR LEU SER VAL SEQRES 13 A 311 TYR GLY GLN SER TYR GLY LEU LYS TRP VAL SER LEU ARG SEQRES 14 A 311 TYR GLY ASN VAL TYR GLY PRO ARG GLN ASP PRO HIS GLY SEQRES 15 A 311 GLU ALA GLY VAL VAL ALA ILE PHE ALA GLU ARG VAL LEU SEQRES 16 A 311 LYS GLY LEU PRO VAL THR LEU TYR ALA ARG LYS THR PRO SEQRES 17 A 311 GLY ASP GLU GLY CYS VAL ARG ASP TYR VAL TYR VAL GLY SEQRES 18 A 311 ASP VAL ALA GLU ALA HIS ALA LEU ALA LEU PHE SER LEU SEQRES 19 A 311 GLU GLY ILE TYR ASN VAL GLY THR GLY GLU GLY HIS THR SEQRES 20 A 311 THR ARG GLU VAL LEU MET ALA VAL ALA GLU ALA ALA GLY SEQRES 21 A 311 LYS ALA PRO GLU VAL GLN PRO ALA PRO PRO ARG PRO GLY SEQRES 22 A 311 ASP LEU GLU ARG SER VAL LEU SER PRO LEU LYS LEU MET SEQRES 23 A 311 ALA HIS GLY TRP ARG PRO LYS VAL GLY PHE GLN GLU GLY SEQRES 24 A 311 ILE ARG LEU THR VAL ASP HIS PHE ARG GLY ALA VAL HET NAD A1118 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 2 NAD C21 H27 N7 O14 P2 FORMUL 3 HOH *217(H2 O) HELIX 1 1 GLY A 10 ALA A 22 1 13 HELIX 2 2 LYS A 37 VAL A 41 5 5 HELIX 3 3 ASP A 54 ARG A 66 1 13 HELIX 4 4 SER A 78 ASP A 85 1 8 HELIX 5 5 ASP A 85 LEU A 94 1 10 HELIX 6 6 LEU A 94 TYR A 107 1 14 HELIX 7 7 GLY A 118 GLY A 123 1 6 HELIX 8 8 SER A 141 GLY A 162 1 22 HELIX 9 9 ALA A 184 GLY A 197 1 14 HELIX 10 10 VAL A 220 LEU A 234 1 15 HELIX 11 11 THR A 248 GLY A 260 1 13 HELIX 12 12 PRO A 282 ALA A 287 1 6 HELIX 13 13 GLY A 295 GLY A 309 1 15 SHEET 1 A 7 PHE A 47 PHE A 48 0 SHEET 2 A 7 GLU A 26 LEU A 30 1 N VAL A 29 O PHE A 48 SHEET 3 A 7 ARG A 2 THR A 6 1 N VAL A 3 O GLU A 26 SHEET 4 A 7 HIS A 69 HIS A 72 1 O SER A 71 N LEU A 4 SHEET 5 A 7 LYS A 111 THR A 117 1 O VAL A 113 N HIS A 72 SHEET 6 A 7 TRP A 165 TYR A 170 1 O VAL A 166 N PHE A 114 SHEET 7 A 7 GLY A 236 VAL A 240 1 O TYR A 238 N SER A 167 SHEET 1 B 2 ASN A 172 TYR A 174 0 SHEET 2 B 2 TYR A 217 TYR A 219 1 O VAL A 218 N ASN A 172 SHEET 1 C 2 VAL A 200 TYR A 203 0 SHEET 2 C 2 VAL A 265 ALA A 268 1 O GLN A 266 N VAL A 200 SHEET 1 D 2 VAL A 214 ARG A 215 0 SHEET 2 D 2 HIS A 246 THR A 247 -1 O HIS A 246 N ARG A 215 SITE 1 AC1 33 GLY A 7 ALA A 9 GLY A 10 PHE A 11 SITE 2 AC1 33 ILE A 12 ASP A 31 ASN A 32 LEU A 33 SITE 3 AC1 33 ALA A 34 THR A 35 GLY A 36 VAL A 50 SITE 4 AC1 33 ASP A 51 LEU A 52 GLN A 73 ALA A 74 SITE 5 AC1 33 ALA A 75 ALA A 77 VAL A 92 ALA A 115 SITE 6 AC1 33 SER A 116 TYR A 143 LYS A 147 TYR A 170 SITE 7 AC1 33 GLY A 171 VAL A 173 GLU A 183 ALA A 184 SITE 8 AC1 33 HOH A1120 HOH A1123 HOH A1127 HOH A1154 SITE 9 AC1 33 HOH A1261 CRYST1 135.667 135.667 135.667 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007371 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007371 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007371 0.00000