HEADER CELL CYCLE 16-MAR-07 2P63 TITLE SUPRAFACIAL ORIENTATION OF THE SCFCDC4 DIMER ACCOMMODATES MULTIPLE TITLE 2 GEOMETRIES FOR SUBSTRATE UBIQUITINATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 4; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: D DOMAIN; COMPND 5 SYNONYM: F-BOX PROTEIN CDC4, E3 UBIQUITIN LIGASE COMPLEX SCF SUBUNIT COMPND 6 CDC4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: CDC4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS UBIQUITINATION, HELIX BUNDLE, SCF COMPLEX, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR S.ORLICKY,D.NECULAI,D.CECCARELLI REVDAT 4 13-JUL-11 2P63 1 VERSN REVDAT 3 24-FEB-09 2P63 1 VERSN REVDAT 2 17-JUN-08 2P63 1 JRNL REVDAT 1 19-JUN-07 2P63 0 JRNL AUTH X.TANG,S.ORLICKY,Z.LIN,A.WILLEMS,D.NECULAI,D.CECCARELLI, JRNL AUTH 2 F.MERCURIO,B.H.SHILTON,F.SICHERI,M.TYERS JRNL TITL SUPRAFACIAL ORIENTATION OF THE SCFCDC4 DIMER ACCOMMODATES JRNL TITL 2 MULTIPLE GEOMETRIES FOR SUBSTRATE UBIQUITINATION. JRNL REF CELL(CAMBRIDGE,MASS.) V. 129 1165 2007 JRNL REFN ISSN 0092-8674 JRNL PMID 17574027 JRNL DOI 10.1016/J.CELL.2007.04.042 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 8.470 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 6284 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 472 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 473 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1678 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 37 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.17000 REMARK 3 B22 (A**2) : 3.17000 REMARK 3 B33 (A**2) : -4.76000 REMARK 3 B12 (A**2) : 1.59000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.406 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.316 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.966 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.871 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1751 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2364 ; 1.270 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 5.045 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;36.380 ;24.516 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 315 ;22.595 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;23.917 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 261 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1334 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 769 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1205 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 79 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.148 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1081 ; 0.775 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1698 ; 1.320 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 733 ; 1.264 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 665 ; 2.044 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 227 A 271 1 REMARK 3 1 C 227 C 271 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 360 ; 0.02 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 360 ; 0.03 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 227 B 271 1 REMARK 3 1 D 227 D 271 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 B (A): 377 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 2 B (A**2): 377 ; 0.03 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 228 A 272 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7972 1.9706 13.6394 REMARK 3 T TENSOR REMARK 3 T11: 0.2315 T22: 0.0249 REMARK 3 T33: 0.1682 T12: 0.0401 REMARK 3 T13: 0.0839 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 1.5798 L22: 5.3017 REMARK 3 L33: 3.7064 L12: -2.6528 REMARK 3 L13: 1.6578 L23: -1.4927 REMARK 3 S TENSOR REMARK 3 S11: 0.2998 S12: -0.0420 S13: 0.0395 REMARK 3 S21: -0.2766 S22: -0.1512 S23: -0.1217 REMARK 3 S31: 0.1004 S32: 0.0563 S33: -0.1486 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 228 B 272 REMARK 3 ORIGIN FOR THE GROUP (A): 9.7408 0.7361 12.1976 REMARK 3 T TENSOR REMARK 3 T11: 0.0685 T22: 0.0866 REMARK 3 T33: 0.1080 T12: 0.1179 REMARK 3 T13: 0.0587 T23: -0.0879 REMARK 3 L TENSOR REMARK 3 L11: 0.6088 L22: 12.1532 REMARK 3 L33: 8.5283 L12: -1.8157 REMARK 3 L13: 1.4875 L23: -2.1455 REMARK 3 S TENSOR REMARK 3 S11: -0.1521 S12: -0.1531 S13: -0.0607 REMARK 3 S21: 0.2297 S22: 0.6962 S23: -0.2269 REMARK 3 S31: -0.1692 S32: 0.0891 S33: -0.5441 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 228 C 273 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0200 -2.3219 -13.7254 REMARK 3 T TENSOR REMARK 3 T11: 0.2212 T22: 0.0446 REMARK 3 T33: 0.1745 T12: -0.0323 REMARK 3 T13: -0.0635 T23: -0.0554 REMARK 3 L TENSOR REMARK 3 L11: 2.0696 L22: 5.0032 REMARK 3 L33: 3.8639 L12: 3.2161 REMARK 3 L13: -1.4600 L23: -2.1437 REMARK 3 S TENSOR REMARK 3 S11: 0.3210 S12: 0.0278 S13: -0.0461 REMARK 3 S21: 0.2370 S22: -0.1054 S23: -0.1133 REMARK 3 S31: -0.1097 S32: 0.0523 S33: -0.2156 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 228 D 273 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4030 -1.0331 -11.7959 REMARK 3 T TENSOR REMARK 3 T11: 0.0772 T22: 0.0754 REMARK 3 T33: 0.1331 T12: -0.0883 REMARK 3 T13: -0.0903 T23: -0.1056 REMARK 3 L TENSOR REMARK 3 L11: 0.4678 L22: 13.2058 REMARK 3 L33: 8.8648 L12: 1.4884 REMARK 3 L13: -1.7439 L23: -2.3367 REMARK 3 S TENSOR REMARK 3 S11: -0.1569 S12: 0.2339 S13: 0.0695 REMARK 3 S21: -0.1281 S22: 0.8252 S23: -0.2537 REMARK 3 S31: 0.2360 S32: 0.0120 S33: -0.6684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2P63 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-07. REMARK 100 THE RCSB ID CODE IS RCSB042012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9788 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR: WATER COOLED; REMARK 200 SAGITALLY FOCUSING 2ND CRYSTAL, REMARK 200 ROSENBAUM-ROCK VERTICAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6756 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 49.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 8.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 9.810 REMARK 200 R MERGE (I) : 0.07020 REMARK 200 R SYM (I) : 0.03490 REMARK 200 FOR THE DATA SET : 21.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.95 REMARK 200 R MERGE FOR SHELL (I) : 0.17120 REMARK 200 R SYM FOR SHELL (I) : 0.12280 REMARK 200 FOR SHELL : 8.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50%MPD, 100 MM (NH4)H2PO4 PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.37267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 198.74533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 149.05900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 248.43167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.68633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 218 REMARK 465 ALA A 219 REMARK 465 MSE A 220 REMARK 465 ASP A 273 REMARK 465 GLY B 218 REMARK 465 ALA B 219 REMARK 465 MSE B 220 REMARK 465 GLY B 221 REMARK 465 ASP B 273 REMARK 465 GLY C 218 REMARK 465 ALA C 219 REMARK 465 MSE C 220 REMARK 465 GLY D 218 REMARK 465 ALA D 219 REMARK 465 MSE D 220 REMARK 465 GLY D 221 REMARK 465 SER D 222 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 255 -169.00 -108.44 REMARK 500 ASP B 228 -73.60 -47.27 REMARK 500 MSE B 254 179.74 -54.16 REMARK 500 GLU C 224 12.61 -147.54 REMARK 500 LYS C 271 51.29 -116.19 REMARK 500 ASN D 253 43.05 -89.72 REMARK 500 REMARK 500 REMARK: NULL DBREF 2P63 A 222 273 UNP P07834 CDC4_YEAST 222 273 DBREF 2P63 B 222 273 UNP P07834 CDC4_YEAST 222 273 DBREF 2P63 C 222 273 UNP P07834 CDC4_YEAST 222 273 DBREF 2P63 D 222 273 UNP P07834 CDC4_YEAST 222 273 SEQADV 2P63 GLY A 218 UNP P07834 CLONING ARTIFACT SEQADV 2P63 ALA A 219 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE A 220 UNP P07834 CLONING ARTIFACT SEQADV 2P63 GLY A 221 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE A 254 UNP P07834 MODIFIED RESIDUE SEQADV 2P63 GLY B 218 UNP P07834 CLONING ARTIFACT SEQADV 2P63 ALA B 219 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE B 220 UNP P07834 CLONING ARTIFACT SEQADV 2P63 GLY B 221 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE B 254 UNP P07834 MODIFIED RESIDUE SEQADV 2P63 GLY C 218 UNP P07834 CLONING ARTIFACT SEQADV 2P63 ALA C 219 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE C 220 UNP P07834 CLONING ARTIFACT SEQADV 2P63 GLY C 221 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE C 254 UNP P07834 MODIFIED RESIDUE SEQADV 2P63 GLY D 218 UNP P07834 CLONING ARTIFACT SEQADV 2P63 ALA D 219 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE D 220 UNP P07834 CLONING ARTIFACT SEQADV 2P63 GLY D 221 UNP P07834 CLONING ARTIFACT SEQADV 2P63 MSE D 254 UNP P07834 MODIFIED RESIDUE SEQRES 1 A 56 GLY ALA MSE GLY SER PRO GLU TYR LEU SER ASP GLU ILE SEQRES 2 A 56 PHE SER ALA ILE ASN ASN ASN LEU PRO HIS ALA TYR PHE SEQRES 3 A 56 LYS ASN LEU LEU PHE ARG LEU VAL ALA ASN MSE ASP ARG SEQRES 4 A 56 SER GLU LEU SER ASP LEU GLY THR LEU ILE LYS ASP ASN SEQRES 5 A 56 LEU LYS ARG ASP SEQRES 1 B 56 GLY ALA MSE GLY SER PRO GLU TYR LEU SER ASP GLU ILE SEQRES 2 B 56 PHE SER ALA ILE ASN ASN ASN LEU PRO HIS ALA TYR PHE SEQRES 3 B 56 LYS ASN LEU LEU PHE ARG LEU VAL ALA ASN MSE ASP ARG SEQRES 4 B 56 SER GLU LEU SER ASP LEU GLY THR LEU ILE LYS ASP ASN SEQRES 5 B 56 LEU LYS ARG ASP SEQRES 1 C 56 GLY ALA MSE GLY SER PRO GLU TYR LEU SER ASP GLU ILE SEQRES 2 C 56 PHE SER ALA ILE ASN ASN ASN LEU PRO HIS ALA TYR PHE SEQRES 3 C 56 LYS ASN LEU LEU PHE ARG LEU VAL ALA ASN MSE ASP ARG SEQRES 4 C 56 SER GLU LEU SER ASP LEU GLY THR LEU ILE LYS ASP ASN SEQRES 5 C 56 LEU LYS ARG ASP SEQRES 1 D 56 GLY ALA MSE GLY SER PRO GLU TYR LEU SER ASP GLU ILE SEQRES 2 D 56 PHE SER ALA ILE ASN ASN ASN LEU PRO HIS ALA TYR PHE SEQRES 3 D 56 LYS ASN LEU LEU PHE ARG LEU VAL ALA ASN MSE ASP ARG SEQRES 4 D 56 SER GLU LEU SER ASP LEU GLY THR LEU ILE LYS ASP ASN SEQRES 5 D 56 LEU LYS ARG ASP MODRES 2P63 MSE A 254 MET SELENOMETHIONINE MODRES 2P63 MSE B 254 MET SELENOMETHIONINE MODRES 2P63 MSE C 254 MET SELENOMETHIONINE MODRES 2P63 MSE D 254 MET SELENOMETHIONINE HET MSE A 254 8 HET MSE B 254 8 HET MSE C 254 8 HET MSE D 254 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 5 HOH *37(H2 O) HELIX 1 1 SER A 227 ASN A 235 1 9 HELIX 2 2 ASN A 236 LEU A 238 5 3 HELIX 3 3 PRO A 239 HIS A 240 5 2 HELIX 4 4 ALA A 241 MSE A 254 1 14 HELIX 5 5 ASP A 255 ARG A 272 1 18 HELIX 6 6 SER B 227 ASN B 236 1 10 HELIX 7 7 ASN B 237 LEU B 238 5 2 HELIX 8 8 PRO B 239 PHE B 243 5 5 HELIX 9 9 ASN B 245 MSE B 254 1 10 HELIX 10 10 ASP B 255 LEU B 270 1 16 HELIX 11 11 SER C 227 ASN C 237 1 11 HELIX 12 12 ALA C 241 ASN C 253 1 13 HELIX 13 13 ASP C 255 LYS C 271 1 17 HELIX 14 14 SER D 227 ASN D 237 1 11 HELIX 15 15 LEU D 238 LYS D 244 5 7 HELIX 16 16 ASN D 245 ASN D 253 1 9 HELIX 17 17 ASP D 255 ARG D 272 1 18 LINK C ASN A 253 N MSE A 254 1555 1555 1.33 LINK C MSE A 254 N ASP A 255 1555 1555 1.34 LINK C ASN B 253 N MSE B 254 1555 1555 1.33 LINK C MSE B 254 N ASP B 255 1555 1555 1.33 LINK C ASN C 253 N MSE C 254 1555 1555 1.33 LINK C MSE C 254 N ASP C 255 1555 1555 1.33 LINK C ASN D 253 N MSE D 254 1555 1555 1.32 LINK C MSE D 254 N ASP D 255 1555 1555 1.33 CRYST1 37.816 37.816 298.118 90.00 90.00 120.00 P 61 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026444 0.015267 0.000000 0.00000 SCALE2 0.000000 0.030535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003354 0.00000