HEADER METAL BINDING PROTEIN, HYDROLASE 20-MAR-07 2P7K TITLE CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE TITLE 2 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (HEXAGONAL FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYOXALASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: EGD-E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET20B(+) KEYWDS FOSFOMYCIN RESISTANCE PROTEIN, MN BINDING, ANTIBIOTIC RESISTANCE, KEYWDS 2 METAL BINDING PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.L.FILLGROVE,S.PAKHOMOVA,M.SCHAAB,M.E.NEWCOMER,R.N.ARMSTRONG REVDAT 4 30-AUG-23 2P7K 1 REMARK REVDAT 3 13-JUL-11 2P7K 1 VERSN REVDAT 2 24-FEB-09 2P7K 1 VERSN REVDAT 1 17-JUL-07 2P7K 0 JRNL AUTH K.L.FILLGROVE,S.PAKHOMOVA,M.R.SCHAAB,M.E.NEWCOMER, JRNL AUTH 2 R.N.ARMSTRONG JRNL TITL STRUCTURE AND MECHANISM OF THE GENOMICALLY ENCODED JRNL TITL 2 FOSFOMYCIN RESISTANCE PROTEIN, FOSX, FROM LISTERIA JRNL TITL 3 MONOCYTOGENES. JRNL REF BIOCHEMISTRY V. 46 8110 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17567049 JRNL DOI 10.1021/BI700625P REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 5815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 293 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 370 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3100 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.5110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1904 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.51000 REMARK 3 B22 (A**2) : 2.51000 REMARK 3 B33 (A**2) : -3.77000 REMARK 3 B12 (A**2) : 1.26000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.555 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.371 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.897 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.867 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1968 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2664 ; 1.244 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 238 ; 6.819 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;38.279 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 322 ;20.328 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;22.270 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 296 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1510 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 978 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1342 ; 0.327 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 85 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.199 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1226 ; 0.272 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1912 ; 0.510 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 824 ; 0.684 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 752 ; 1.183 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 33 1 REMARK 3 1 B 1 B 33 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 247 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 247 ; 0.02 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 41 A 128 1 REMARK 3 1 B 41 B 128 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 691 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 691 ; 0.02 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 33 REMARK 3 RESIDUE RANGE : A 42 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 35.5687 10.0730 -1.6623 REMARK 3 T TENSOR REMARK 3 T11: -0.0148 T22: -0.0568 REMARK 3 T33: -0.0210 T12: -0.0463 REMARK 3 T13: -0.0090 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 6.7273 L22: 8.1927 REMARK 3 L33: 6.1108 L12: -2.4043 REMARK 3 L13: 0.1367 L23: 0.5909 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: -0.3452 S13: 0.0426 REMARK 3 S21: -0.2403 S22: 0.0163 S23: -0.2713 REMARK 3 S31: 0.3969 S32: 0.3158 S33: 0.0007 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 33 REMARK 3 RESIDUE RANGE : B 42 B 128 REMARK 3 ORIGIN FOR THE GROUP (A): 26.4920 25.8192 2.4511 REMARK 3 T TENSOR REMARK 3 T11: -0.0634 T22: 0.0129 REMARK 3 T33: -0.0258 T12: 0.0024 REMARK 3 T13: 0.0083 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 5.7121 L22: 9.1237 REMARK 3 L33: 6.3743 L12: -1.8394 REMARK 3 L13: -0.8176 L23: 0.3174 REMARK 3 S TENSOR REMARK 3 S11: -0.1953 S12: -0.0238 S13: 0.2393 REMARK 3 S21: -0.1943 S22: 0.1543 S23: -0.1234 REMARK 3 S31: -0.4048 S32: -0.1816 S33: 0.0410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2P7K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000042065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CAMD REMARK 200 BEAMLINE : GCPCC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.069 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6831 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1R9C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 8000, 20 MM NA ACETATE, 0.1 M REMARK 280 NA CITRATE, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.14867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.29733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.22300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 95.37167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.07433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 34 REMARK 465 GLY A 35 REMARK 465 ASP A 36 REMARK 465 LYS A 37 REMARK 465 THR A 38 REMARK 465 PHE A 39 REMARK 465 SER A 40 REMARK 465 LYS A 129 REMARK 465 ARG A 130 REMARK 465 TYR A 131 REMARK 465 HIS A 132 REMARK 465 GLU A 133 REMARK 465 SER B 34 REMARK 465 GLY B 35 REMARK 465 ASP B 36 REMARK 465 LYS B 37 REMARK 465 THR B 38 REMARK 465 PHE B 39 REMARK 465 SER B 40 REMARK 465 LYS B 129 REMARK 465 ARG B 130 REMARK 465 TYR B 131 REMARK 465 HIS B 132 REMARK 465 GLU B 133 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 TYR A 32 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 33 OG REMARK 470 LEU A 41 CG CD1 CD2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 GLN A 63 CG CD OE1 NE2 REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 99 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 101 CG CD OE1 NE2 REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 13 CG CD CE NZ REMARK 470 TYR B 32 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 33 OG REMARK 470 LEU B 41 CG CD1 CD2 REMARK 470 LYS B 43 CG CD CE NZ REMARK 470 GLN B 63 CG CD OE1 NE2 REMARK 470 GLN B 101 CG CD OE1 NE2 REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 3 -86.36 -56.69 REMARK 500 LEU A 15 -78.01 -72.08 REMARK 500 SER A 61 81.90 -63.32 REMARK 500 SER A 76 -56.22 -27.48 REMARK 500 ARG A 99 -103.26 -82.46 REMARK 500 GLN A 101 63.98 31.67 REMARK 500 ASN A 114 12.30 51.13 REMARK 500 SER B 3 -88.14 -56.54 REMARK 500 LEU B 15 -76.91 -72.10 REMARK 500 SER B 61 82.03 -64.16 REMARK 500 SER B 76 -56.84 -27.75 REMARK 500 ARG B 99 -95.79 -93.50 REMARK 500 GLN B 101 63.81 31.73 REMARK 500 ASN B 114 12.37 51.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 134 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2P7L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (MONOCLINIC FORM GROWN REMARK 900 AT PH 5.75) REMARK 900 RELATED ID: 2P7M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (MONOCLINIC FORM GROWN REMARK 900 AT PH 6.5) REMARK 900 RELATED ID: 2P7O RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES (TETRAGONAL FORM) REMARK 900 RELATED ID: 2P7P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GENOMICALLY ENCODED FOSFOMYCIN RESISTANCE REMARK 900 PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES COMPLEXED WITH MN(II) REMARK 900 AND SULFATE ION REMARK 900 RELATED ID: 2P7Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E126Q MUTANT OF GENOMICALLY ENCODED FOSFOMYCIN REMARK 900 RESISTANCE PROTEIN, FOSX, FROM LISTERIA MONOCYTOGENES COMPLEXED REMARK 900 WITH MN(II) AND 1S,2S-DIHYDROXYPROPYLPHOSPHONIC ACID DBREF 2P7K A 1 133 UNP Q71YW5 Q71YW5_LISMF 1 133 DBREF 2P7K B 1 133 UNP Q71YW5 Q71YW5_LISMF 1 133 SEQRES 1 A 133 MET ILE SER GLY LEU SER HIS ILE THR LEU ILE VAL LYS SEQRES 2 A 133 ASP LEU ASN LYS THR THR ALA PHE LEU GLN ASN ILE PHE SEQRES 3 A 133 ASN ALA GLU GLU ILE TYR SER SER GLY ASP LYS THR PHE SEQRES 4 A 133 SER LEU SER LYS GLU LYS PHE PHE LEU ILE ALA GLY LEU SEQRES 5 A 133 TRP ILE CYS ILE MET GLU GLY ASP SER LEU GLN GLU ARG SEQRES 6 A 133 THR TYR ASN HIS ILE ALA PHE GLN ILE GLN SER GLU GLU SEQRES 7 A 133 VAL ASP GLU TYR THR GLU ARG ILE LYS ALA LEU GLY VAL SEQRES 8 A 133 GLU MET LYS PRO GLU ARG PRO ARG VAL GLN GLY GLU GLY SEQRES 9 A 133 ARG SER ILE TYR PHE TYR ASP PHE ASP ASN HIS LEU PHE SEQRES 10 A 133 GLU LEU HIS ALA GLY THR LEU GLU GLU ARG LEU LYS ARG SEQRES 11 A 133 TYR HIS GLU SEQRES 1 B 133 MET ILE SER GLY LEU SER HIS ILE THR LEU ILE VAL LYS SEQRES 2 B 133 ASP LEU ASN LYS THR THR ALA PHE LEU GLN ASN ILE PHE SEQRES 3 B 133 ASN ALA GLU GLU ILE TYR SER SER GLY ASP LYS THR PHE SEQRES 4 B 133 SER LEU SER LYS GLU LYS PHE PHE LEU ILE ALA GLY LEU SEQRES 5 B 133 TRP ILE CYS ILE MET GLU GLY ASP SER LEU GLN GLU ARG SEQRES 6 B 133 THR TYR ASN HIS ILE ALA PHE GLN ILE GLN SER GLU GLU SEQRES 7 B 133 VAL ASP GLU TYR THR GLU ARG ILE LYS ALA LEU GLY VAL SEQRES 8 B 133 GLU MET LYS PRO GLU ARG PRO ARG VAL GLN GLY GLU GLY SEQRES 9 B 133 ARG SER ILE TYR PHE TYR ASP PHE ASP ASN HIS LEU PHE SEQRES 10 B 133 GLU LEU HIS ALA GLY THR LEU GLU GLU ARG LEU LYS ARG SEQRES 11 B 133 TYR HIS GLU HET CIT A 134 13 HET CIT B 134 13 HETNAM CIT CITRIC ACID FORMUL 3 CIT 2(C6 H8 O7) FORMUL 5 HOH *6(H2 O) HELIX 1 1 ASP A 14 PHE A 26 1 13 HELIX 2 2 GLU A 77 ALA A 88 1 12 HELIX 3 3 ASP B 14 PHE B 26 1 13 HELIX 4 4 GLU B 77 ALA B 88 1 12 SHEET 1 A 7 GLU A 29 GLU A 30 0 SHEET 2 A 7 GLU A 44 LEU A 48 -1 O LEU A 48 N GLU A 29 SHEET 3 A 7 TRP A 53 GLU A 58 -1 O ILE A 56 N LYS A 45 SHEET 4 A 7 LEU A 5 VAL A 12 1 N ILE A 8 O CYS A 55 SHEET 5 A 7 HIS B 69 GLN B 73 -1 O ALA B 71 N SER A 6 SHEET 6 A 7 LEU B 116 ALA B 121 1 O HIS B 120 N PHE B 72 SHEET 7 A 7 ARG B 105 TYR B 110 -1 N ILE B 107 O LEU B 119 SHEET 1 B 7 ARG A 105 TYR A 110 0 SHEET 2 B 7 LEU A 116 ALA A 121 -1 O LEU A 119 N ILE A 107 SHEET 3 B 7 HIS A 69 GLN A 73 1 N PHE A 72 O HIS A 120 SHEET 4 B 7 LEU B 5 VAL B 12 -1 O SER B 6 N ALA A 71 SHEET 5 B 7 TRP B 53 GLU B 58 1 O CYS B 55 N ILE B 8 SHEET 6 B 7 GLU B 44 LEU B 48 -1 N LYS B 45 O ILE B 56 SHEET 7 B 7 GLU B 29 GLU B 30 -1 N GLU B 29 O LEU B 48 SITE 1 AC1 10 HIS A 7 THR A 9 GLU A 44 PHE A 46 SITE 2 AC1 10 TYR B 67 HIS B 69 ARG B 99 TYR B 108 SITE 3 AC1 10 GLU B 118 ARG B 127 SITE 1 AC2 8 TYR A 67 HIS A 69 GLU A 118 ARG A 127 SITE 2 AC2 8 HIS B 7 THR B 9 GLU B 44 PHE B 46 CRYST1 83.524 83.524 114.446 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011973 0.006912 0.000000 0.00000 SCALE2 0.000000 0.013825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008738 0.00000