HEADER ISOMERASE 27-MAR-07 2PA7 TITLE STRUCTURE OF WILD-TYPE DTDP-4-KETO-6-DEOXY-D-GLUCOSE-3,4-KETOISOMERASE TITLE 2 FROM ANEURINIBACILLUS THERMOAEROPHILUS IN COMPLEX WITH TDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DTDP-6-DEOXY-3,4-KETO-HEXULOSE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.3.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANEURINIBACILLUS THERMOAEROPHILUS; SOURCE 3 ORGANISM_TAXID: 143495; SOURCE 4 STRAIN: L420-91T; SOURCE 5 GENE: FDTA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS DEOXYSUGAR BIOSYNTHESIS, S-LAYER BIOSYNTHESIS, KETOISOMERASE, KEYWDS 2 ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.L.DAVIS,J.B.THODEN,H.M.HOLDEN REVDAT 4 21-FEB-24 2PA7 1 REMARK SEQADV REVDAT 3 24-FEB-09 2PA7 1 VERSN REVDAT 2 03-JUL-07 2PA7 1 JRNL REVDAT 1 24-APR-07 2PA7 0 JRNL AUTH M.L.DAVIS,J.B.THODEN,H.M.HOLDEN JRNL TITL THE X-RAY STRUCTURE OF JRNL TITL 2 DTDP-4-KETO-6-DEOXY-D-GLUCOSE-3,4-KETOISOMERASE. JRNL REF J.BIOL.CHEM. V. 282 19227 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17459872 JRNL DOI 10.1074/JBC.M702529200 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 62623 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 6370 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.1950 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 62623 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2185 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 389 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : NULL ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : ENGH & HUBER REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : OVERALL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PA7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97907, 0.96411, 0.97924, REMARK 200 0.96411 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62658 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 48.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.52400 REMARK 200 R SYM FOR SHELL (I) : 0.52400 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-21% PEG 3400, 150-200MM KCL, 100MM REMARK 280 HEPES, 10MM TDP, 20MM FUCOSE, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.66550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.86250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.86250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.33275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.86250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.86250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 150.99825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.86250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.86250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.33275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.86250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.86250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 150.99825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 100.66550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 137 REMARK 465 GLU A 138 REMARK 465 GLY A 139 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 136 REMARK 465 LYS B 137 REMARK 465 GLU B 138 REMARK 465 GLY B 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 2 CD GLU A 2 OE2 0.069 REMARK 500 GLU A 44 CD GLU A 44 OE2 0.077 REMARK 500 GLU A 116 CD GLU A 116 OE2 0.067 REMARK 500 GLU B 44 CD GLU B 44 OE2 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 81 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ASP A 81 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASP A 112 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 112 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP A 115 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 115 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 118 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 124 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 13 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 CYS B 65 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP B 81 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 81 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP B 99 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 112 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP B 112 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP B 118 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 118 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 25 -71.19 -106.17 REMARK 500 ASP A 81 19.87 -151.49 REMARK 500 ASP A 118 30.71 -88.22 REMARK 500 ASP B 81 21.86 -146.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 140 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD A 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD B 140 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 144 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 144 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 146 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 147 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PAE RELATED DB: PDB REMARK 900 RELATED ID: 2PAK RELATED DB: PDB REMARK 900 RELATED ID: 2PAM RELATED DB: PDB DBREF 2PA7 A 1 139 UNP Q6T1W8 Q6T1W8_ANETH 1 139 DBREF 2PA7 B 1 139 UNP Q6T1W8 Q6T1W8_ANETH 1 139 SEQADV 2PA7 GLY A -1 UNP Q6T1W8 CLONING ARTIFACT SEQADV 2PA7 HIS A 0 UNP Q6T1W8 CLONING ARTIFACT SEQADV 2PA7 GLY B -1 UNP Q6T1W8 CLONING ARTIFACT SEQADV 2PA7 HIS B 0 UNP Q6T1W8 CLONING ARTIFACT SEQRES 1 A 141 GLY HIS MET GLU ASN LYS VAL ILE ASN PHE LYS LYS ILE SEQRES 2 A 141 ILE ASP SER ARG GLY SER LEU VAL ALA ILE GLU GLU ASN SEQRES 3 A 141 LYS ASN ILE PRO PHE SER ILE LYS ARG VAL TYR TYR ILE SEQRES 4 A 141 PHE ASP THR LYS GLY GLU GLU PRO ARG GLY PHE HIS ALA SEQRES 5 A 141 HIS LYS LYS LEU GLU GLN VAL LEU VAL CYS LEU ASN GLY SEQRES 6 A 141 SER CYS ARG VAL ILE LEU ASP ASP GLY ASN ILE ILE GLN SEQRES 7 A 141 GLU ILE THR LEU ASP SER PRO ALA VAL GLY LEU TYR VAL SEQRES 8 A 141 GLY PRO ALA VAL TRP HIS GLU MET HIS ASP PHE SER SER SEQRES 9 A 141 ASP CYS VAL MET MET VAL LEU ALA SER ASP TYR TYR ASP SEQRES 10 A 141 GLU THR ASP TYR ILE ARG GLN TYR ASP ASN PHE LYS LYS SEQRES 11 A 141 TYR ILE ALA LYS ILE ASN LEU GLU LYS GLU GLY SEQRES 1 B 141 GLY HIS MET GLU ASN LYS VAL ILE ASN PHE LYS LYS ILE SEQRES 2 B 141 ILE ASP SER ARG GLY SER LEU VAL ALA ILE GLU GLU ASN SEQRES 3 B 141 LYS ASN ILE PRO PHE SER ILE LYS ARG VAL TYR TYR ILE SEQRES 4 B 141 PHE ASP THR LYS GLY GLU GLU PRO ARG GLY PHE HIS ALA SEQRES 5 B 141 HIS LYS LYS LEU GLU GLN VAL LEU VAL CYS LEU ASN GLY SEQRES 6 B 141 SER CYS ARG VAL ILE LEU ASP ASP GLY ASN ILE ILE GLN SEQRES 7 B 141 GLU ILE THR LEU ASP SER PRO ALA VAL GLY LEU TYR VAL SEQRES 8 B 141 GLY PRO ALA VAL TRP HIS GLU MET HIS ASP PHE SER SER SEQRES 9 B 141 ASP CYS VAL MET MET VAL LEU ALA SER ASP TYR TYR ASP SEQRES 10 B 141 GLU THR ASP TYR ILE ARG GLN TYR ASP ASN PHE LYS LYS SEQRES 11 B 141 TYR ILE ALA LYS ILE ASN LEU GLU LYS GLU GLY HET CL A 140 1 HET TYD A 141 25 HET EDO A 142 4 HET EDO A 143 4 HET EDO A 144 4 HET EDO A 145 4 HET EDO A 146 4 HET EDO A 147 4 HET TYD B 140 25 HET EDO B 141 4 HET EDO B 142 4 HET EDO B 143 4 HET EDO B 144 4 HETNAM CL CHLORIDE ION HETNAM TYD THYMIDINE-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CL CL 1- FORMUL 4 TYD 2(C10 H16 N2 O11 P2) FORMUL 5 EDO 10(C2 H6 O2) FORMUL 16 HOH *389(H2 O) HELIX 1 1 ASP A 115 THR A 117 5 3 HELIX 2 2 GLN A 122 GLU A 136 1 15 HELIX 3 3 ASP B 115 THR B 117 5 3 HELIX 4 4 GLN B 122 LEU B 135 1 14 SHEET 1 A 7 VAL A 5 ASN A 7 0 SHEET 2 A 7 VAL A 85 VAL A 89 -1 O GLY A 86 N ILE A 6 SHEET 3 A 7 GLN A 56 ASN A 62 -1 N GLN A 56 O VAL A 89 SHEET 4 A 7 VAL A 105 ALA A 110 -1 O MET A 107 N VAL A 59 SHEET 5 A 7 ARG A 33 PHE A 38 -1 N TYR A 35 O VAL A 108 SHEET 6 A 7 GLY B 16 GLU B 22 -1 O ILE B 21 N VAL A 34 SHEET 7 A 7 LYS B 10 ASP B 13 -1 N ILE B 11 O LEU B 18 SHEET 1 B 7 LYS A 10 ASP A 13 0 SHEET 2 B 7 GLY A 16 GLU A 22 -1 O LEU A 18 N ILE A 11 SHEET 3 B 7 ARG B 33 PHE B 38 -1 O VAL B 34 N ILE A 21 SHEET 4 B 7 VAL B 105 ALA B 110 -1 O VAL B 108 N TYR B 35 SHEET 5 B 7 GLN B 56 ASN B 62 -1 N VAL B 59 O MET B 107 SHEET 6 B 7 VAL B 85 VAL B 89 -1 O VAL B 89 N GLN B 56 SHEET 7 B 7 VAL B 5 ASN B 7 -1 N ILE B 6 O GLY B 86 SHEET 1 C 5 ILE A 75 LEU A 80 0 SHEET 2 C 5 CYS A 65 ASP A 70 -1 N VAL A 67 O ILE A 78 SHEET 3 C 5 TRP A 94 HIS A 98 -1 O HIS A 98 N ARG A 66 SHEET 4 C 5 ARG A 46 HIS A 51 -1 N PHE A 48 O HIS A 95 SHEET 5 C 5 TYR A 119 ILE A 120 -1 O ILE A 120 N ALA A 50 SHEET 1 D 5 ILE B 75 LEU B 80 0 SHEET 2 D 5 CYS B 65 ASP B 70 -1 N CYS B 65 O LEU B 80 SHEET 3 D 5 TRP B 94 HIS B 98 -1 O HIS B 98 N ARG B 66 SHEET 4 D 5 ARG B 46 HIS B 51 -1 N PHE B 48 O HIS B 95 SHEET 5 D 5 TYR B 119 ILE B 120 -1 O ILE B 120 N ALA B 50 SITE 1 AC1 3 HOH A 322 ASP B 70 LYS B 127 SITE 1 AC2 14 ARG A 33 TYR A 114 ARG A 121 EDO A 147 SITE 2 AC2 14 HOH A 162 HOH A 195 HOH A 197 HOH A 289 SITE 3 AC2 14 ILE B 11 ARG B 15 ALA B 20 GLN B 122 SITE 4 AC2 14 EDO B 141 EDO B 142 SITE 1 AC3 18 ARG A 15 LEU A 18 ALA A 20 EDO A 142 SITE 2 AC3 18 EDO A 143 HOH A 352 ARG B 33 ARG B 46 SITE 3 AC3 18 TYR B 114 TYR B 119 ARG B 121 HOH B 150 SITE 4 AC3 18 HOH B 189 HOH B 190 HOH B 239 HOH B 246 SITE 5 AC3 18 HOH B 296 HOH B 304 SITE 1 AC4 6 ARG A 46 TYD A 141 ILE B 11 ASP B 13 SITE 2 AC4 6 ARG B 15 GLY B 16 SITE 1 AC5 8 ILE A 11 ASP A 13 ARG A 15 GLY A 16 SITE 2 AC5 8 SER A 17 LEU A 18 ARG B 46 TYD B 140 SITE 1 AC6 5 LYS A 9 VAL A 19 ALA A 20 HOH A 246 SITE 2 AC6 5 TYD B 140 SITE 1 AC7 7 GLU A 23 ILE A 31 HOH A 158 HOH A 159 SITE 2 AC7 7 HOH A 254 GLU B 23 ILE B 31 SITE 1 AC8 8 GLU A 43 GLU A 44 PRO A 45 HIS A 98 SITE 2 AC8 8 ASP A 99 PHE A 100 HOH A 169 HOH A 187 SITE 1 AC9 6 TYD A 141 LYS B 9 VAL B 19 ALA B 20 SITE 2 AC9 6 HOH B 250 HOH B 288 SITE 1 BC1 8 GLU B 43 GLU B 44 PRO B 45 HIS B 98 SITE 2 BC1 8 ASP B 99 PHE B 100 HOH B 148 HOH B 165 SITE 1 BC2 4 LYS B 25 ASN B 26 ILE B 27 PRO B 28 SITE 1 BC3 4 GLU A 43 GLU A 44 LYS B 52 LYS B 132 SITE 1 BC4 6 ARG A 46 HIS A 49 MET A 97 TYD A 141 SITE 2 BC4 6 HOH A 222 HOH A 289 CRYST1 61.725 61.725 201.331 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016201 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004967 0.00000