data_2PB7 # _entry.id 2PB7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PB7 pdb_00002pb7 10.2210/pdb2pb7/pdb RCSB RCSB042184 ? ? WWPDB D_1000042184 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PB7 _pdbx_database_status.recvd_initial_deposition_date 2007-03-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Delagoutte, B.' 1 'Birck, C.' 2 'Samama, J.P.' 3 # _citation.id primary _citation.title 'The mammalian SRA domain is a new nucleosome binding motif' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Delagoutte, B.' 1 ? primary 'Atmanene, C.' 2 ? primary 'Birck, C.' 3 ? primary 'Sanglier, S.' 4 ? primary 'Mantovani, R.' 5 ? primary 'Bonapace, I.M.' 6 ? primary 'Oudet, P.' 7 ? primary 'Van Dorsselaer, A.' 8 ? primary 'Moras, D.' 9 ? primary 'Samama, J.P.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase UHRF1' 26791.812 1 6.3.2.- ? 'SRA domain' ? 2 water nat water 18.015 91 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Ubiquitin-like PHD and RING finger domain-containing protein 1, Ubiquitin-like-containing PHD and RING finger domains protein 1, Inverted CCAAT box-binding protein of 90 kDa, Transcription factor ICBP90, Nuclear zinc finger protein Np95, Nuclear protein 95, HuNp95, RING finger protein 106 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR DLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKY WPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTG ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR DLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKY WPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 LYS n 1 5 GLU n 1 6 CYS n 1 7 THR n 1 8 ILE n 1 9 VAL n 1 10 PRO n 1 11 SER n 1 12 ASN n 1 13 HIS n 1 14 TYR n 1 15 GLY n 1 16 PRO n 1 17 ILE n 1 18 PRO n 1 19 GLY n 1 20 ILE n 1 21 PRO n 1 22 VAL n 1 23 GLY n 1 24 THR n 1 25 MET n 1 26 TRP n 1 27 ARG n 1 28 PHE n 1 29 ARG n 1 30 VAL n 1 31 GLN n 1 32 VAL n 1 33 SER n 1 34 GLU n 1 35 SER n 1 36 GLY n 1 37 VAL n 1 38 HIS n 1 39 ARG n 1 40 PRO n 1 41 HIS n 1 42 VAL n 1 43 ALA n 1 44 GLY n 1 45 ILE n 1 46 HIS n 1 47 GLY n 1 48 ARG n 1 49 SER n 1 50 ASN n 1 51 ASP n 1 52 GLY n 1 53 ALA n 1 54 TYR n 1 55 SER n 1 56 LEU n 1 57 VAL n 1 58 LEU n 1 59 ALA n 1 60 GLY n 1 61 GLY n 1 62 TYR n 1 63 GLU n 1 64 ASP n 1 65 ASP n 1 66 VAL n 1 67 ASP n 1 68 HIS n 1 69 GLY n 1 70 ASN n 1 71 PHE n 1 72 PHE n 1 73 THR n 1 74 TYR n 1 75 THR n 1 76 GLY n 1 77 SER n 1 78 GLY n 1 79 GLY n 1 80 ARG n 1 81 ASP n 1 82 LEU n 1 83 SER n 1 84 GLY n 1 85 ASN n 1 86 LYS n 1 87 ARG n 1 88 THR n 1 89 ALA n 1 90 GLU n 1 91 GLN n 1 92 SER n 1 93 CYS n 1 94 ASP n 1 95 GLN n 1 96 LYS n 1 97 LEU n 1 98 THR n 1 99 ASN n 1 100 THR n 1 101 ASN n 1 102 ARG n 1 103 ALA n 1 104 LEU n 1 105 ALA n 1 106 LEU n 1 107 ASN n 1 108 CYS n 1 109 PHE n 1 110 ALA n 1 111 PRO n 1 112 ILE n 1 113 ASN n 1 114 ASP n 1 115 GLN n 1 116 GLU n 1 117 GLY n 1 118 ALA n 1 119 GLU n 1 120 ALA n 1 121 LYS n 1 122 ASP n 1 123 TRP n 1 124 ARG n 1 125 SER n 1 126 GLY n 1 127 LYS n 1 128 PRO n 1 129 VAL n 1 130 ARG n 1 131 VAL n 1 132 VAL n 1 133 ARG n 1 134 ASN n 1 135 VAL n 1 136 LYS n 1 137 GLY n 1 138 GLY n 1 139 LYS n 1 140 ASN n 1 141 SER n 1 142 LYS n 1 143 TYR n 1 144 ALA n 1 145 PRO n 1 146 ALA n 1 147 GLU n 1 148 GLY n 1 149 ASN n 1 150 ARG n 1 151 TYR n 1 152 ASP n 1 153 GLY n 1 154 ILE n 1 155 TYR n 1 156 LYS n 1 157 VAL n 1 158 VAL n 1 159 LYS n 1 160 TYR n 1 161 TRP n 1 162 PRO n 1 163 GLU n 1 164 LYS n 1 165 GLY n 1 166 LYS n 1 167 SER n 1 168 GLY n 1 169 PHE n 1 170 LEU n 1 171 VAL n 1 172 TRP n 1 173 ARG n 1 174 TYR n 1 175 LEU n 1 176 LEU n 1 177 ARG n 1 178 ARG n 1 179 ASP n 1 180 ASP n 1 181 ASP n 1 182 GLU n 1 183 PRO n 1 184 GLY n 1 185 PRO n 1 186 TRP n 1 187 THR n 1 188 LYS n 1 189 GLU n 1 190 GLY n 1 191 LYS n 1 192 ASP n 1 193 ARG n 1 194 ILE n 1 195 LYS n 1 196 LYS n 1 197 LEU n 1 198 GLY n 1 199 LEU n 1 200 THR n 1 201 MET n 1 202 GLN n 1 203 TYR n 1 204 PRO n 1 205 GLU n 1 206 GLY n 1 207 TYR n 1 208 LEU n 1 209 GLU n 1 210 ALA n 1 211 LEU n 1 212 ALA n 1 213 ASN n 1 214 ARG n 1 215 GLU n 1 216 ARG n 1 217 GLU n 1 218 LYS n 1 219 GLU n 1 220 ASN n 1 221 SER n 1 222 LYS n 1 223 ARG n 1 224 GLU n 1 225 GLU n 1 226 GLU n 1 227 GLU n 1 228 GLN n 1 229 GLN n 1 230 GLU n 1 231 GLY n 1 232 GLY n 1 233 PHE n 1 234 ALA n 1 235 SER n 1 236 PRO n 1 237 ARG n 1 238 THR n 1 239 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'UHRF1, ICBP90, NP95, RNF106' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pHGWA (home made based on pET22b)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 405 ? ? ? A . n A 1 2 HIS 2 406 ? ? ? A . n A 1 3 MET 3 407 ? ? ? A . n A 1 4 LYS 4 408 ? ? ? A . n A 1 5 GLU 5 409 409 GLU GLU A . n A 1 6 CYS 6 410 410 CYS CYS A . n A 1 7 THR 7 411 411 THR THR A . n A 1 8 ILE 8 412 412 ILE ILE A . n A 1 9 VAL 9 413 413 VAL VAL A . n A 1 10 PRO 10 414 414 PRO PRO A . n A 1 11 SER 11 415 415 SER SER A . n A 1 12 ASN 12 416 416 ASN ASN A . n A 1 13 HIS 13 417 417 HIS HIS A . n A 1 14 TYR 14 418 418 TYR TYR A . n A 1 15 GLY 15 419 419 GLY GLY A . n A 1 16 PRO 16 420 420 PRO PRO A . n A 1 17 ILE 17 421 421 ILE ILE A . n A 1 18 PRO 18 422 422 PRO PRO A . n A 1 19 GLY 19 423 423 GLY GLY A . n A 1 20 ILE 20 424 424 ILE ILE A . n A 1 21 PRO 21 425 425 PRO PRO A . n A 1 22 VAL 22 426 426 VAL VAL A . n A 1 23 GLY 23 427 427 GLY GLY A . n A 1 24 THR 24 428 428 THR THR A . n A 1 25 MET 25 429 429 MET MET A . n A 1 26 TRP 26 430 430 TRP TRP A . n A 1 27 ARG 27 431 431 ARG ARG A . n A 1 28 PHE 28 432 432 PHE PHE A . n A 1 29 ARG 29 433 433 ARG ARG A . n A 1 30 VAL 30 434 434 VAL VAL A . n A 1 31 GLN 31 435 435 GLN GLN A . n A 1 32 VAL 32 436 436 VAL VAL A . n A 1 33 SER 33 437 437 SER SER A . n A 1 34 GLU 34 438 438 GLU GLU A . n A 1 35 SER 35 439 439 SER SER A . n A 1 36 GLY 36 440 440 GLY GLY A . n A 1 37 VAL 37 441 441 VAL VAL A . n A 1 38 HIS 38 442 442 HIS HIS A . n A 1 39 ARG 39 443 443 ARG ARG A . n A 1 40 PRO 40 444 444 PRO PRO A . n A 1 41 HIS 41 445 445 HIS HIS A . n A 1 42 VAL 42 446 446 VAL VAL A . n A 1 43 ALA 43 447 447 ALA ALA A . n A 1 44 GLY 44 448 448 GLY GLY A . n A 1 45 ILE 45 449 449 ILE ILE A . n A 1 46 HIS 46 450 450 HIS HIS A . n A 1 47 GLY 47 451 451 GLY GLY A . n A 1 48 ARG 48 452 452 ARG ARG A . n A 1 49 SER 49 453 453 SER SER A . n A 1 50 ASN 50 454 454 ASN ASN A . n A 1 51 ASP 51 455 455 ASP ASP A . n A 1 52 GLY 52 456 456 GLY GLY A . n A 1 53 ALA 53 457 457 ALA ALA A . n A 1 54 TYR 54 458 458 TYR TYR A . n A 1 55 SER 55 459 459 SER SER A . n A 1 56 LEU 56 460 460 LEU LEU A . n A 1 57 VAL 57 461 461 VAL VAL A . n A 1 58 LEU 58 462 462 LEU LEU A . n A 1 59 ALA 59 463 463 ALA ALA A . n A 1 60 GLY 60 464 464 GLY GLY A . n A 1 61 GLY 61 465 465 GLY GLY A . n A 1 62 TYR 62 466 466 TYR TYR A . n A 1 63 GLU 63 467 467 GLU GLU A . n A 1 64 ASP 64 468 468 ASP ASP A . n A 1 65 ASP 65 469 469 ASP ASP A . n A 1 66 VAL 66 470 470 VAL VAL A . n A 1 67 ASP 67 471 471 ASP ASP A . n A 1 68 HIS 68 472 472 HIS HIS A . n A 1 69 GLY 69 473 473 GLY GLY A . n A 1 70 ASN 70 474 474 ASN ASN A . n A 1 71 PHE 71 475 475 PHE PHE A . n A 1 72 PHE 72 476 476 PHE PHE A . n A 1 73 THR 73 477 477 THR THR A . n A 1 74 TYR 74 478 478 TYR TYR A . n A 1 75 THR 75 479 479 THR THR A . n A 1 76 GLY 76 480 480 GLY GLY A . n A 1 77 SER 77 481 481 SER SER A . n A 1 78 GLY 78 482 482 GLY GLY A . n A 1 79 GLY 79 483 483 GLY GLY A . n A 1 80 ARG 80 484 ? ? ? A . n A 1 81 ASP 81 485 ? ? ? A . n A 1 82 LEU 82 486 ? ? ? A . n A 1 83 SER 83 487 ? ? ? A . n A 1 84 GLY 84 488 ? ? ? A . n A 1 85 ASN 85 489 ? ? ? A . n A 1 86 LYS 86 490 ? ? ? A . n A 1 87 ARG 87 491 ? ? ? A . n A 1 88 THR 88 492 ? ? ? A . n A 1 89 ALA 89 493 ? ? ? A . n A 1 90 GLU 90 494 494 GLU GLU A . n A 1 91 GLN 91 495 495 GLN GLN A . n A 1 92 SER 92 496 496 SER SER A . n A 1 93 CYS 93 497 497 CYS CYS A . n A 1 94 ASP 94 498 498 ASP ASP A . n A 1 95 GLN 95 499 499 GLN GLN A . n A 1 96 LYS 96 500 500 LYS LYS A . n A 1 97 LEU 97 501 501 LEU LEU A . n A 1 98 THR 98 502 502 THR THR A . n A 1 99 ASN 99 503 503 ASN ASN A . n A 1 100 THR 100 504 504 THR THR A . n A 1 101 ASN 101 505 505 ASN ASN A . n A 1 102 ARG 102 506 506 ARG ARG A . n A 1 103 ALA 103 507 507 ALA ALA A . n A 1 104 LEU 104 508 508 LEU LEU A . n A 1 105 ALA 105 509 509 ALA ALA A . n A 1 106 LEU 106 510 510 LEU LEU A . n A 1 107 ASN 107 511 511 ASN ASN A . n A 1 108 CYS 108 512 512 CYS CYS A . n A 1 109 PHE 109 513 513 PHE PHE A . n A 1 110 ALA 110 514 514 ALA ALA A . n A 1 111 PRO 111 515 515 PRO PRO A . n A 1 112 ILE 112 516 516 ILE ILE A . n A 1 113 ASN 113 517 517 ASN ASN A . n A 1 114 ASP 114 518 518 ASP ASP A . n A 1 115 GLN 115 519 519 GLN GLN A . n A 1 116 GLU 116 520 520 GLU GLU A . n A 1 117 GLY 117 521 521 GLY GLY A . n A 1 118 ALA 118 522 522 ALA ALA A . n A 1 119 GLU 119 523 523 GLU GLU A . n A 1 120 ALA 120 524 524 ALA ALA A . n A 1 121 LYS 121 525 525 LYS LYS A . n A 1 122 ASP 122 526 526 ASP ASP A . n A 1 123 TRP 123 527 527 TRP TRP A . n A 1 124 ARG 124 528 528 ARG ARG A . n A 1 125 SER 125 529 529 SER SER A . n A 1 126 GLY 126 530 530 GLY GLY A . n A 1 127 LYS 127 531 531 LYS LYS A . n A 1 128 PRO 128 532 532 PRO PRO A . n A 1 129 VAL 129 533 533 VAL VAL A . n A 1 130 ARG 130 534 534 ARG ARG A . n A 1 131 VAL 131 535 535 VAL VAL A . n A 1 132 VAL 132 536 536 VAL VAL A . n A 1 133 ARG 133 537 537 ARG ARG A . n A 1 134 ASN 134 538 538 ASN ASN A . n A 1 135 VAL 135 539 539 VAL VAL A . n A 1 136 LYS 136 540 540 LYS LYS A . n A 1 137 GLY 137 541 541 GLY GLY A . n A 1 138 GLY 138 542 542 GLY GLY A . n A 1 139 LYS 139 543 543 LYS LYS A . n A 1 140 ASN 140 544 544 ASN ASN A . n A 1 141 SER 141 545 545 SER SER A . n A 1 142 LYS 142 546 546 LYS LYS A . n A 1 143 TYR 143 547 547 TYR TYR A . n A 1 144 ALA 144 548 548 ALA ALA A . n A 1 145 PRO 145 549 549 PRO PRO A . n A 1 146 ALA 146 550 550 ALA ALA A . n A 1 147 GLU 147 551 551 GLU GLU A . n A 1 148 GLY 148 552 552 GLY GLY A . n A 1 149 ASN 149 553 553 ASN ASN A . n A 1 150 ARG 150 554 554 ARG ARG A . n A 1 151 TYR 151 555 555 TYR TYR A . n A 1 152 ASP 152 556 556 ASP ASP A . n A 1 153 GLY 153 557 557 GLY GLY A . n A 1 154 ILE 154 558 558 ILE ILE A . n A 1 155 TYR 155 559 559 TYR TYR A . n A 1 156 LYS 156 560 560 LYS LYS A . n A 1 157 VAL 157 561 561 VAL VAL A . n A 1 158 VAL 158 562 562 VAL VAL A . n A 1 159 LYS 159 563 563 LYS LYS A . n A 1 160 TYR 160 564 564 TYR TYR A . n A 1 161 TRP 161 565 565 TRP TRP A . n A 1 162 PRO 162 566 566 PRO PRO A . n A 1 163 GLU 163 567 567 GLU GLU A . n A 1 164 LYS 164 568 568 LYS LYS A . n A 1 165 GLY 165 569 569 GLY GLY A . n A 1 166 LYS 166 570 570 LYS LYS A . n A 1 167 SER 167 571 571 SER SER A . n A 1 168 GLY 168 572 572 GLY GLY A . n A 1 169 PHE 169 573 573 PHE PHE A . n A 1 170 LEU 170 574 574 LEU LEU A . n A 1 171 VAL 171 575 575 VAL VAL A . n A 1 172 TRP 172 576 576 TRP TRP A . n A 1 173 ARG 173 577 577 ARG ARG A . n A 1 174 TYR 174 578 578 TYR TYR A . n A 1 175 LEU 175 579 579 LEU LEU A . n A 1 176 LEU 176 580 580 LEU LEU A . n A 1 177 ARG 177 581 581 ARG ARG A . n A 1 178 ARG 178 582 582 ARG ARG A . n A 1 179 ASP 179 583 583 ASP ASP A . n A 1 180 ASP 180 584 584 ASP ASP A . n A 1 181 ASP 181 585 585 ASP ASP A . n A 1 182 GLU 182 586 586 GLU GLU A . n A 1 183 PRO 183 587 587 PRO PRO A . n A 1 184 GLY 184 588 588 GLY GLY A . n A 1 185 PRO 185 589 589 PRO PRO A . n A 1 186 TRP 186 590 590 TRP TRP A . n A 1 187 THR 187 591 591 THR THR A . n A 1 188 LYS 188 592 592 LYS LYS A . n A 1 189 GLU 189 593 593 GLU GLU A . n A 1 190 GLY 190 594 594 GLY GLY A . n A 1 191 LYS 191 595 595 LYS LYS A . n A 1 192 ASP 192 596 596 ASP ASP A . n A 1 193 ARG 193 597 597 ARG ARG A . n A 1 194 ILE 194 598 598 ILE ILE A . n A 1 195 LYS 195 599 599 LYS LYS A . n A 1 196 LYS 196 600 600 LYS LYS A . n A 1 197 LEU 197 601 601 LEU LEU A . n A 1 198 GLY 198 602 602 GLY GLY A . n A 1 199 LEU 199 603 603 LEU LEU A . n A 1 200 THR 200 604 604 THR THR A . n A 1 201 MET 201 605 605 MET MET A . n A 1 202 GLN 202 606 606 GLN GLN A . n A 1 203 TYR 203 607 607 TYR TYR A . n A 1 204 PRO 204 608 608 PRO PRO A . n A 1 205 GLU 205 609 609 GLU GLU A . n A 1 206 GLY 206 610 610 GLY GLY A . n A 1 207 TYR 207 611 611 TYR TYR A . n A 1 208 LEU 208 612 612 LEU LEU A . n A 1 209 GLU 209 613 613 GLU GLU A . n A 1 210 ALA 210 614 614 ALA ALA A . n A 1 211 LEU 211 615 615 LEU LEU A . n A 1 212 ALA 212 616 ? ? ? A . n A 1 213 ASN 213 617 ? ? ? A . n A 1 214 ARG 214 618 ? ? ? A . n A 1 215 GLU 215 619 ? ? ? A . n A 1 216 ARG 216 620 ? ? ? A . n A 1 217 GLU 217 621 ? ? ? A . n A 1 218 LYS 218 622 ? ? ? A . n A 1 219 GLU 219 623 ? ? ? A . n A 1 220 ASN 220 624 ? ? ? A . n A 1 221 SER 221 625 ? ? ? A . n A 1 222 LYS 222 626 ? ? ? A . n A 1 223 ARG 223 627 ? ? ? A . n A 1 224 GLU 224 628 ? ? ? A . n A 1 225 GLU 225 629 ? ? ? A . n A 1 226 GLU 226 630 ? ? ? A . n A 1 227 GLU 227 631 ? ? ? A . n A 1 228 GLN 228 632 ? ? ? A . n A 1 229 GLN 229 633 ? ? ? A . n A 1 230 GLU 230 634 ? ? ? A . n A 1 231 GLY 231 635 ? ? ? A . n A 1 232 GLY 232 636 ? ? ? A . n A 1 233 PHE 233 637 ? ? ? A . n A 1 234 ALA 234 638 ? ? ? A . n A 1 235 SER 235 639 ? ? ? A . n A 1 236 PRO 236 640 ? ? ? A . n A 1 237 ARG 237 641 ? ? ? A . n A 1 238 THR 238 642 ? ? ? A . n A 1 239 GLY 239 643 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 644 1 HOH WAT A . B 2 HOH 2 645 2 HOH WAT A . B 2 HOH 3 646 3 HOH WAT A . B 2 HOH 4 647 4 HOH WAT A . B 2 HOH 5 648 5 HOH WAT A . B 2 HOH 6 649 6 HOH WAT A . B 2 HOH 7 650 7 HOH WAT A . B 2 HOH 8 651 8 HOH WAT A . B 2 HOH 9 652 9 HOH WAT A . B 2 HOH 10 653 10 HOH WAT A . B 2 HOH 11 654 11 HOH WAT A . B 2 HOH 12 655 12 HOH WAT A . B 2 HOH 13 656 13 HOH WAT A . B 2 HOH 14 657 14 HOH WAT A . B 2 HOH 15 658 15 HOH WAT A . B 2 HOH 16 659 16 HOH WAT A . B 2 HOH 17 660 17 HOH WAT A . B 2 HOH 18 661 18 HOH WAT A . B 2 HOH 19 662 19 HOH WAT A . B 2 HOH 20 663 20 HOH WAT A . B 2 HOH 21 664 21 HOH WAT A . B 2 HOH 22 665 22 HOH WAT A . B 2 HOH 23 666 23 HOH WAT A . B 2 HOH 24 667 24 HOH WAT A . B 2 HOH 25 668 25 HOH WAT A . B 2 HOH 26 669 26 HOH WAT A . B 2 HOH 27 670 27 HOH WAT A . B 2 HOH 28 671 28 HOH WAT A . B 2 HOH 29 672 29 HOH WAT A . B 2 HOH 30 673 30 HOH WAT A . B 2 HOH 31 674 31 HOH WAT A . B 2 HOH 32 675 32 HOH WAT A . B 2 HOH 33 676 33 HOH WAT A . B 2 HOH 34 677 34 HOH WAT A . B 2 HOH 35 678 35 HOH WAT A . B 2 HOH 36 679 36 HOH WAT A . B 2 HOH 37 680 37 HOH WAT A . B 2 HOH 38 681 38 HOH WAT A . B 2 HOH 39 682 39 HOH WAT A . B 2 HOH 40 683 40 HOH WAT A . B 2 HOH 41 684 41 HOH WAT A . B 2 HOH 42 685 42 HOH WAT A . B 2 HOH 43 686 43 HOH WAT A . B 2 HOH 44 687 44 HOH WAT A . B 2 HOH 45 688 45 HOH WAT A . B 2 HOH 46 689 46 HOH WAT A . B 2 HOH 47 690 47 HOH WAT A . B 2 HOH 48 691 48 HOH WAT A . B 2 HOH 49 692 49 HOH WAT A . B 2 HOH 50 693 50 HOH WAT A . B 2 HOH 51 694 51 HOH WAT A . B 2 HOH 52 695 52 HOH WAT A . B 2 HOH 53 696 53 HOH WAT A . B 2 HOH 54 697 54 HOH WAT A . B 2 HOH 55 698 55 HOH WAT A . B 2 HOH 56 699 56 HOH WAT A . B 2 HOH 57 700 57 HOH WAT A . B 2 HOH 58 701 58 HOH WAT A . B 2 HOH 59 702 59 HOH WAT A . B 2 HOH 60 703 61 HOH WAT A . B 2 HOH 61 704 62 HOH WAT A . B 2 HOH 62 705 63 HOH WAT A . B 2 HOH 63 706 64 HOH WAT A . B 2 HOH 64 707 65 HOH WAT A . B 2 HOH 65 708 66 HOH WAT A . B 2 HOH 66 709 67 HOH WAT A . B 2 HOH 67 710 68 HOH WAT A . B 2 HOH 68 711 69 HOH WAT A . B 2 HOH 69 712 70 HOH WAT A . B 2 HOH 70 713 71 HOH WAT A . B 2 HOH 71 714 72 HOH WAT A . B 2 HOH 72 715 73 HOH WAT A . B 2 HOH 73 716 74 HOH WAT A . B 2 HOH 74 717 75 HOH WAT A . B 2 HOH 75 718 76 HOH WAT A . B 2 HOH 76 719 77 HOH WAT A . B 2 HOH 77 720 78 HOH WAT A . B 2 HOH 78 721 79 HOH WAT A . B 2 HOH 79 722 80 HOH WAT A . B 2 HOH 80 723 81 HOH WAT A . B 2 HOH 81 724 82 HOH WAT A . B 2 HOH 82 725 83 HOH WAT A . B 2 HOH 83 726 84 HOH WAT A . B 2 HOH 84 727 85 HOH WAT A . B 2 HOH 85 728 86 HOH WAT A . B 2 HOH 86 729 87 HOH WAT A . B 2 HOH 87 730 88 HOH WAT A . B 2 HOH 88 731 89 HOH WAT A . B 2 HOH 89 732 90 HOH WAT A . B 2 HOH 90 733 91 HOH WAT A . B 2 HOH 91 734 92 HOH WAT A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 409 ? CG ? A GLU 5 CG 2 1 Y 1 A GLU 409 ? CD ? A GLU 5 CD 3 1 Y 1 A GLU 409 ? OE1 ? A GLU 5 OE1 4 1 Y 1 A GLU 409 ? OE2 ? A GLU 5 OE2 5 1 Y 1 A TYR 466 ? CD1 ? A TYR 62 CD1 6 1 Y 1 A TYR 466 ? CD2 ? A TYR 62 CD2 7 1 Y 1 A TYR 466 ? CE1 ? A TYR 62 CE1 8 1 Y 1 A TYR 466 ? CE2 ? A TYR 62 CE2 9 1 Y 1 A TYR 466 ? CZ ? A TYR 62 CZ 10 1 Y 1 A TYR 466 ? OH ? A TYR 62 OH 11 1 Y 1 A GLU 494 ? CB ? A GLU 90 CB 12 1 Y 1 A GLU 494 ? CG ? A GLU 90 CG 13 1 Y 1 A GLU 494 ? CD ? A GLU 90 CD 14 1 Y 1 A GLU 494 ? OE1 ? A GLU 90 OE1 15 1 Y 1 A GLU 494 ? OE2 ? A GLU 90 OE2 16 1 Y 1 A GLN 495 ? CG ? A GLN 91 CG 17 1 Y 1 A GLN 495 ? CD ? A GLN 91 CD 18 1 Y 1 A GLN 495 ? OE1 ? A GLN 91 OE1 19 1 Y 1 A GLN 495 ? NE2 ? A GLN 91 NE2 20 1 Y 1 A LYS 500 ? CE ? A LYS 96 CE 21 1 Y 1 A LYS 500 ? NZ ? A LYS 96 NZ 22 1 Y 1 A LYS 525 ? CD ? A LYS 121 CD 23 1 Y 1 A LYS 525 ? CE ? A LYS 121 CE 24 1 Y 1 A LYS 525 ? NZ ? A LYS 121 NZ 25 1 Y 1 A LYS 540 ? CD ? A LYS 136 CD 26 1 Y 1 A LYS 540 ? CE ? A LYS 136 CE 27 1 Y 1 A LYS 540 ? NZ ? A LYS 136 NZ 28 1 Y 1 A LYS 543 ? CG ? A LYS 139 CG 29 1 Y 1 A LYS 543 ? CD ? A LYS 139 CD 30 1 Y 1 A LYS 543 ? CE ? A LYS 139 CE 31 1 Y 1 A LYS 543 ? NZ ? A LYS 139 NZ 32 1 Y 1 A ASN 544 ? CG ? A ASN 140 CG 33 1 Y 1 A ASN 544 ? OD1 ? A ASN 140 OD1 34 1 Y 1 A ASN 544 ? ND2 ? A ASN 140 ND2 35 1 Y 1 A LYS 546 ? CD ? A LYS 142 CD 36 1 Y 1 A LYS 546 ? CE ? A LYS 142 CE 37 1 Y 1 A LYS 546 ? NZ ? A LYS 142 NZ 38 1 Y 1 A LYS 570 ? CG ? A LYS 166 CG 39 1 Y 1 A LYS 570 ? CD ? A LYS 166 CD 40 1 Y 1 A LYS 570 ? CE ? A LYS 166 CE 41 1 Y 1 A LYS 570 ? NZ ? A LYS 166 NZ 42 1 Y 1 A LYS 592 ? CG ? A LYS 188 CG 43 1 Y 1 A LYS 592 ? CD ? A LYS 188 CD 44 1 Y 1 A LYS 592 ? CE ? A LYS 188 CE 45 1 Y 1 A LYS 592 ? NZ ? A LYS 188 NZ 46 1 Y 1 A GLU 609 ? CB ? A GLU 205 CB 47 1 Y 1 A GLU 609 ? CG ? A GLU 205 CG 48 1 Y 1 A GLU 609 ? CD ? A GLU 205 CD 49 1 Y 1 A GLU 609 ? OE1 ? A GLU 205 OE1 50 1 Y 1 A GLU 609 ? OE2 ? A GLU 205 OE2 51 1 Y 1 A LEU 612 ? CB ? A LEU 208 CB 52 1 Y 1 A LEU 612 ? CG ? A LEU 208 CG 53 1 Y 1 A LEU 612 ? CD1 ? A LEU 208 CD1 54 1 Y 1 A LEU 612 ? CD2 ? A LEU 208 CD2 55 1 Y 1 A GLU 613 ? CB ? A GLU 209 CB 56 1 Y 1 A GLU 613 ? CG ? A GLU 209 CG 57 1 Y 1 A GLU 613 ? CD ? A GLU 209 CD 58 1 Y 1 A GLU 613 ? OE1 ? A GLU 209 OE1 59 1 Y 1 A GLU 613 ? OE2 ? A GLU 209 OE2 60 1 Y 1 A LEU 615 ? CB ? A LEU 211 CB 61 1 Y 1 A LEU 615 ? CG ? A LEU 211 CG 62 1 Y 1 A LEU 615 ? CD1 ? A LEU 211 CD1 63 1 Y 1 A LEU 615 ? CD2 ? A LEU 211 CD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxCuBE 'data collection' . ? 1 SOLVE phasing . ? 2 CNS refinement 1.1 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 2PB7 _cell.length_a 53.929 _cell.length_b 53.929 _cell.length_c 161.995 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PB7 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2PB7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_percent_sol 51.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '14-19% PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2006-03-01 _diffrn_detector.details 'Si (111) monochromator and Pt coated mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si (111) monochromator and Pt coated mirrors' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.8730 1.0 2 0.9791 1.0 3 0.9795 1.0 4 0.9757 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.8730, 0.9791, 0.9795, 0.9757' # _reflns.entry_id 2PB7 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50 _reflns.number_all 22424 _reflns.number_obs 22424 _reflns.percent_possible_obs 94.0 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value 0.081 _reflns.pdbx_netI_over_sigmaI 5.0 _reflns.B_iso_Wilson_estimate 39 _reflns.pdbx_redundancy 5.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.0 _reflns_shell.percent_possible_all 95.6 _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.pdbx_Rsym_value 0.351 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 7.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3220 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2PB7 _refine.ls_d_res_high 1.9 _refine.ls_d_res_low 10.0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 22207 _refine.ls_number_reflns_obs 22207 _refine.ls_number_reflns_R_free 1088 _refine.ls_percent_reflns_obs 99 _refine.ls_R_factor_all 0.206 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.227 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model 'MAD model' _refine.pdbx_ls_cross_valid_method sigmaa _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model anisotropic _refine.B_iso_mean 33.19 _refine.aniso_B[1][1] -5.858 _refine.aniso_B[1][2] -3.183 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][2] -5.858 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] 11.716 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2PB7 _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.26 _refine_analyze.Luzzati_sigma_a_free 0.21 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1488 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 1579 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0102 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.407 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.911 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.375 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.97 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.274 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.305 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 66 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1013 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2PB7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2PB7 _struct.title 'Crystal Structure of the SRA domain of the human UHRF1 protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PB7 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'beta barrel, new fold, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UHRF1_HUMAN _struct_ref.pdbx_db_accession Q96T88 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLS GNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPE KGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTG ; _struct_ref.pdbx_align_begin 408 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PB7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 239 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96T88 _struct_ref_seq.db_align_beg 408 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 643 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 408 _struct_ref_seq.pdbx_auth_seq_align_end 643 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PB7 GLY A 1 ? UNP Q96T88 ? ? 'expression tag' 405 1 1 2PB7 HIS A 2 ? UNP Q96T88 ? ? 'expression tag' 406 2 1 2PB7 MET A 3 ? UNP Q96T88 ? ? 'expression tag' 407 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 28 ? SER A 35 ? PHE A 432 SER A 439 1 ? 8 HELX_P HELX_P2 2 THR A 98 ? ASN A 107 ? THR A 502 ASN A 511 1 ? 10 HELX_P HELX_P3 3 ASP A 122 ? GLY A 126 ? ASP A 526 GLY A 530 5 ? 5 HELX_P HELX_P4 4 LYS A 136 ? ASN A 140 ? LYS A 540 ASN A 544 5 ? 5 HELX_P HELX_P5 5 THR A 187 ? LEU A 197 ? THR A 591 LEU A 601 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 25 ? TRP A 26 ? MET A 429 TRP A 430 A 2 ASN A 149 ? LYS A 164 ? ASN A 553 LYS A 568 A 3 LEU A 170 ? ARG A 178 ? LEU A 574 ARG A 582 A 4 PHE A 71 ? THR A 75 ? PHE A 475 THR A 479 B 1 ILE A 45 ? ARG A 48 ? ILE A 449 ARG A 452 B 2 GLY A 52 ? LEU A 58 ? GLY A 456 LEU A 462 B 3 VAL A 129 ? ASN A 134 ? VAL A 533 ASN A 538 B 4 ASN A 149 ? LYS A 164 ? ASN A 553 LYS A 568 B 5 ALA A 118 ? GLU A 119 ? ALA A 522 GLU A 523 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 26 ? N TRP A 430 O ASN A 149 ? O ASN A 553 A 2 3 N TRP A 161 ? N TRP A 565 O ARG A 173 ? O ARG A 577 A 3 4 O LEU A 176 ? O LEU A 580 N PHE A 72 ? N PHE A 476 B 1 2 N HIS A 46 ? N HIS A 450 O SER A 55 ? O SER A 459 B 2 3 N LEU A 58 ? N LEU A 462 O ASN A 134 ? O ASN A 538 B 3 4 N VAL A 131 ? N VAL A 535 O ASP A 152 ? O ASP A 556 B 4 5 O TYR A 160 ? O TYR A 564 N ALA A 118 ? N ALA A 522 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 455 ? ? -151.20 -72.46 2 1 GLU A 467 ? ? 25.51 -120.74 3 1 ASP A 468 ? ? -95.59 35.02 4 1 ASN A 503 ? ? 51.08 -127.68 5 1 ALA A 614 ? ? -90.69 46.56 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 405 ? A GLY 1 2 1 Y 1 A HIS 406 ? A HIS 2 3 1 Y 1 A MET 407 ? A MET 3 4 1 Y 1 A LYS 408 ? A LYS 4 5 1 Y 1 A ARG 484 ? A ARG 80 6 1 Y 1 A ASP 485 ? A ASP 81 7 1 Y 1 A LEU 486 ? A LEU 82 8 1 Y 1 A SER 487 ? A SER 83 9 1 Y 1 A GLY 488 ? A GLY 84 10 1 Y 1 A ASN 489 ? A ASN 85 11 1 Y 1 A LYS 490 ? A LYS 86 12 1 Y 1 A ARG 491 ? A ARG 87 13 1 Y 1 A THR 492 ? A THR 88 14 1 Y 1 A ALA 493 ? A ALA 89 15 1 Y 1 A ALA 616 ? A ALA 212 16 1 Y 1 A ASN 617 ? A ASN 213 17 1 Y 1 A ARG 618 ? A ARG 214 18 1 Y 1 A GLU 619 ? A GLU 215 19 1 Y 1 A ARG 620 ? A ARG 216 20 1 Y 1 A GLU 621 ? A GLU 217 21 1 Y 1 A LYS 622 ? A LYS 218 22 1 Y 1 A GLU 623 ? A GLU 219 23 1 Y 1 A ASN 624 ? A ASN 220 24 1 Y 1 A SER 625 ? A SER 221 25 1 Y 1 A LYS 626 ? A LYS 222 26 1 Y 1 A ARG 627 ? A ARG 223 27 1 Y 1 A GLU 628 ? A GLU 224 28 1 Y 1 A GLU 629 ? A GLU 225 29 1 Y 1 A GLU 630 ? A GLU 226 30 1 Y 1 A GLU 631 ? A GLU 227 31 1 Y 1 A GLN 632 ? A GLN 228 32 1 Y 1 A GLN 633 ? A GLN 229 33 1 Y 1 A GLU 634 ? A GLU 230 34 1 Y 1 A GLY 635 ? A GLY 231 35 1 Y 1 A GLY 636 ? A GLY 232 36 1 Y 1 A PHE 637 ? A PHE 233 37 1 Y 1 A ALA 638 ? A ALA 234 38 1 Y 1 A SER 639 ? A SER 235 39 1 Y 1 A PRO 640 ? A PRO 236 40 1 Y 1 A ARG 641 ? A ARG 237 41 1 Y 1 A THR 642 ? A THR 238 42 1 Y 1 A GLY 643 ? A GLY 239 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'MAD model' # _atom_sites.entry_id 2PB7 _atom_sites.fract_transf_matrix[1][1] 0.018543 _atom_sites.fract_transf_matrix[1][2] 0.010706 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021411 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006173 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_