data_2PB9 # _entry.id 2PB9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PB9 pdb_00002pb9 10.2210/pdb2pb9/pdb RCSB RCSB042186 ? ? WWPDB D_1000042186 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-10 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-02-03 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_entry_details 10 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_citation_author.identifier_ORCID' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 5 'Structure model' '_database_2.pdbx_DOI' 9 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PB9 _pdbx_database_status.recvd_initial_deposition_date 2007-03-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-10417c _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Eswaramoorthy, S.' 1 ? 'Burley, S.K.' 2 0000-0002-2487-9713 'Swaminathan, S.' 3 ? 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 4 ? # _citation.id primary _citation.title 'Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Eswaramoorthy, S.' 1 ? primary 'Burley, S.K.' 2 0000-0002-2487-9713 primary 'Swaminathan, S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphomethylpyrimidine kinase' 22869.697 2 ? ? 'C-terminal domain' ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 water nat water 18.015 53 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Hmp-phosphate kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SLEKWRIYEELTNAVREFESINPVRLIPEVGTNFVYSLPLPYARSTKDVAGVKGRIVKYGNSVKAVGPVEFGASD HLARAVLTY(MSE)RFYPEYRSAINIRYSREIIEEIIEIAQERGFKVSFYDRREEPEEIKAKEGATIPWGIETAIKRIKE RPDIIYHLGDVGKEP(MSE)ILVFGRNPREVLEKIK(MSE)LIEGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLEKWRIYEELTNAVREFESINPVRLIPEVGTNFVYSLPLPYARSTKDVAGVKGRIVKYGNSVKAVGPVEFGASDHLAR AVLTYMRFYPEYRSAINIRYSREIIEEIIEIAQERGFKVSFYDRREEPEEIKAKEGATIPWGIETAIKRIKERPDIIYHL GDVGKEPMILVFGRNPREVLEKIKMLIEGHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier NYSGXRC-10417c # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 LEU n 1 4 GLU n 1 5 LYS n 1 6 TRP n 1 7 ARG n 1 8 ILE n 1 9 TYR n 1 10 GLU n 1 11 GLU n 1 12 LEU n 1 13 THR n 1 14 ASN n 1 15 ALA n 1 16 VAL n 1 17 ARG n 1 18 GLU n 1 19 PHE n 1 20 GLU n 1 21 SER n 1 22 ILE n 1 23 ASN n 1 24 PRO n 1 25 VAL n 1 26 ARG n 1 27 LEU n 1 28 ILE n 1 29 PRO n 1 30 GLU n 1 31 VAL n 1 32 GLY n 1 33 THR n 1 34 ASN n 1 35 PHE n 1 36 VAL n 1 37 TYR n 1 38 SER n 1 39 LEU n 1 40 PRO n 1 41 LEU n 1 42 PRO n 1 43 TYR n 1 44 ALA n 1 45 ARG n 1 46 SER n 1 47 THR n 1 48 LYS n 1 49 ASP n 1 50 VAL n 1 51 ALA n 1 52 GLY n 1 53 VAL n 1 54 LYS n 1 55 GLY n 1 56 ARG n 1 57 ILE n 1 58 VAL n 1 59 LYS n 1 60 TYR n 1 61 GLY n 1 62 ASN n 1 63 SER n 1 64 VAL n 1 65 LYS n 1 66 ALA n 1 67 VAL n 1 68 GLY n 1 69 PRO n 1 70 VAL n 1 71 GLU n 1 72 PHE n 1 73 GLY n 1 74 ALA n 1 75 SER n 1 76 ASP n 1 77 HIS n 1 78 LEU n 1 79 ALA n 1 80 ARG n 1 81 ALA n 1 82 VAL n 1 83 LEU n 1 84 THR n 1 85 TYR n 1 86 MSE n 1 87 ARG n 1 88 PHE n 1 89 TYR n 1 90 PRO n 1 91 GLU n 1 92 TYR n 1 93 ARG n 1 94 SER n 1 95 ALA n 1 96 ILE n 1 97 ASN n 1 98 ILE n 1 99 ARG n 1 100 TYR n 1 101 SER n 1 102 ARG n 1 103 GLU n 1 104 ILE n 1 105 ILE n 1 106 GLU n 1 107 GLU n 1 108 ILE n 1 109 ILE n 1 110 GLU n 1 111 ILE n 1 112 ALA n 1 113 GLN n 1 114 GLU n 1 115 ARG n 1 116 GLY n 1 117 PHE n 1 118 LYS n 1 119 VAL n 1 120 SER n 1 121 PHE n 1 122 TYR n 1 123 ASP n 1 124 ARG n 1 125 ARG n 1 126 GLU n 1 127 GLU n 1 128 PRO n 1 129 GLU n 1 130 GLU n 1 131 ILE n 1 132 LYS n 1 133 ALA n 1 134 LYS n 1 135 GLU n 1 136 GLY n 1 137 ALA n 1 138 THR n 1 139 ILE n 1 140 PRO n 1 141 TRP n 1 142 GLY n 1 143 ILE n 1 144 GLU n 1 145 THR n 1 146 ALA n 1 147 ILE n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 LYS n 1 152 GLU n 1 153 ARG n 1 154 PRO n 1 155 ASP n 1 156 ILE n 1 157 ILE n 1 158 TYR n 1 159 HIS n 1 160 LEU n 1 161 GLY n 1 162 ASP n 1 163 VAL n 1 164 GLY n 1 165 LYS n 1 166 GLU n 1 167 PRO n 1 168 MSE n 1 169 ILE n 1 170 LEU n 1 171 VAL n 1 172 PHE n 1 173 GLY n 1 174 ARG n 1 175 ASN n 1 176 PRO n 1 177 ARG n 1 178 GLU n 1 179 VAL n 1 180 LEU n 1 181 GLU n 1 182 LYS n 1 183 ILE n 1 184 LYS n 1 185 MSE n 1 186 LEU n 1 187 ILE n 1 188 GLU n 1 189 GLY n 1 190 HIS n 1 191 HIS n 1 192 HIS n 1 193 HIS n 1 194 HIS n 1 195 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pyrococcus _entity_src_gen.pdbx_gene_src_gene PF1333 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 3638, JCM 8422, Vc1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2261 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 43587 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pSGX3(BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 265 ? ? ? A . n A 1 2 SER 2 266 ? ? ? A . n A 1 3 LEU 3 267 ? ? ? A . n A 1 4 GLU 4 268 268 GLU GLU A . n A 1 5 LYS 5 269 269 LYS LYS A . n A 1 6 TRP 6 270 270 TRP TRP A . n A 1 7 ARG 7 271 271 ARG ARG A . n A 1 8 ILE 8 272 272 ILE ILE A . n A 1 9 TYR 9 273 273 TYR TYR A . n A 1 10 GLU 10 274 274 GLU GLU A . n A 1 11 GLU 11 275 275 GLU GLU A . n A 1 12 LEU 12 276 276 LEU LEU A . n A 1 13 THR 13 277 277 THR THR A . n A 1 14 ASN 14 278 278 ASN ASN A . n A 1 15 ALA 15 279 279 ALA ALA A . n A 1 16 VAL 16 280 280 VAL VAL A . n A 1 17 ARG 17 281 281 ARG ARG A . n A 1 18 GLU 18 282 282 GLU GLU A . n A 1 19 PHE 19 283 283 PHE PHE A . n A 1 20 GLU 20 284 284 GLU GLU A . n A 1 21 SER 21 285 285 SER SER A . n A 1 22 ILE 22 286 286 ILE ILE A . n A 1 23 ASN 23 287 287 ASN ASN A . n A 1 24 PRO 24 288 288 PRO PRO A . n A 1 25 VAL 25 289 289 VAL VAL A . n A 1 26 ARG 26 290 290 ARG ARG A . n A 1 27 LEU 27 291 291 LEU LEU A . n A 1 28 ILE 28 292 292 ILE ILE A . n A 1 29 PRO 29 293 293 PRO PRO A . n A 1 30 GLU 30 294 294 GLU GLU A . n A 1 31 VAL 31 295 295 VAL VAL A . n A 1 32 GLY 32 296 296 GLY GLY A . n A 1 33 THR 33 297 297 THR THR A . n A 1 34 ASN 34 298 298 ASN ASN A . n A 1 35 PHE 35 299 299 PHE PHE A . n A 1 36 VAL 36 300 300 VAL VAL A . n A 1 37 TYR 37 301 301 TYR TYR A . n A 1 38 SER 38 302 302 SER SER A . n A 1 39 LEU 39 303 303 LEU LEU A . n A 1 40 PRO 40 304 304 PRO PRO A . n A 1 41 LEU 41 305 305 LEU LEU A . n A 1 42 PRO 42 306 306 PRO PRO A . n A 1 43 TYR 43 307 307 TYR TYR A . n A 1 44 ALA 44 308 308 ALA ALA A . n A 1 45 ARG 45 309 309 ARG ARG A . n A 1 46 SER 46 310 310 SER SER A . n A 1 47 THR 47 311 311 THR THR A . n A 1 48 LYS 48 312 312 LYS LYS A . n A 1 49 ASP 49 313 313 ASP ASP A . n A 1 50 VAL 50 314 314 VAL VAL A . n A 1 51 ALA 51 315 315 ALA ALA A . n A 1 52 GLY 52 316 316 GLY GLY A . n A 1 53 VAL 53 317 317 VAL VAL A . n A 1 54 LYS 54 318 318 LYS LYS A . n A 1 55 GLY 55 319 319 GLY GLY A . n A 1 56 ARG 56 320 320 ARG ARG A . n A 1 57 ILE 57 321 321 ILE ILE A . n A 1 58 VAL 58 322 322 VAL VAL A . n A 1 59 LYS 59 323 323 LYS LYS A . n A 1 60 TYR 60 324 324 TYR TYR A . n A 1 61 GLY 61 325 325 GLY GLY A . n A 1 62 ASN 62 326 326 ASN ASN A . n A 1 63 SER 63 327 327 SER SER A . n A 1 64 VAL 64 328 328 VAL VAL A . n A 1 65 LYS 65 329 329 LYS LYS A . n A 1 66 ALA 66 330 330 ALA ALA A . n A 1 67 VAL 67 331 331 VAL VAL A . n A 1 68 GLY 68 332 332 GLY GLY A . n A 1 69 PRO 69 333 333 PRO PRO A . n A 1 70 VAL 70 334 334 VAL VAL A . n A 1 71 GLU 71 335 335 GLU GLU A . n A 1 72 PHE 72 336 336 PHE PHE A . n A 1 73 GLY 73 337 337 GLY GLY A . n A 1 74 ALA 74 338 338 ALA ALA A . n A 1 75 SER 75 339 339 SER SER A . n A 1 76 ASP 76 340 340 ASP ASP A . n A 1 77 HIS 77 341 341 HIS HIS A . n A 1 78 LEU 78 342 342 LEU LEU A . n A 1 79 ALA 79 343 343 ALA ALA A . n A 1 80 ARG 80 344 344 ARG ARG A . n A 1 81 ALA 81 345 345 ALA ALA A . n A 1 82 VAL 82 346 346 VAL VAL A . n A 1 83 LEU 83 347 347 LEU LEU A . n A 1 84 THR 84 348 348 THR THR A . n A 1 85 TYR 85 349 349 TYR TYR A . n A 1 86 MSE 86 350 350 MSE MSE A . n A 1 87 ARG 87 351 351 ARG ARG A . n A 1 88 PHE 88 352 352 PHE PHE A . n A 1 89 TYR 89 353 353 TYR TYR A . n A 1 90 PRO 90 354 354 PRO PRO A . n A 1 91 GLU 91 355 355 GLU GLU A . n A 1 92 TYR 92 356 356 TYR TYR A . n A 1 93 ARG 93 357 357 ARG ARG A . n A 1 94 SER 94 358 358 SER SER A . n A 1 95 ALA 95 359 359 ALA ALA A . n A 1 96 ILE 96 360 360 ILE ILE A . n A 1 97 ASN 97 361 361 ASN ASN A . n A 1 98 ILE 98 362 362 ILE ILE A . n A 1 99 ARG 99 363 363 ARG ARG A . n A 1 100 TYR 100 364 364 TYR TYR A . n A 1 101 SER 101 365 365 SER SER A . n A 1 102 ARG 102 366 366 ARG ARG A . n A 1 103 GLU 103 367 367 GLU GLU A . n A 1 104 ILE 104 368 368 ILE ILE A . n A 1 105 ILE 105 369 369 ILE ILE A . n A 1 106 GLU 106 370 370 GLU GLU A . n A 1 107 GLU 107 371 371 GLU GLU A . n A 1 108 ILE 108 372 372 ILE ILE A . n A 1 109 ILE 109 373 373 ILE ILE A . n A 1 110 GLU 110 374 374 GLU GLU A . n A 1 111 ILE 111 375 375 ILE ILE A . n A 1 112 ALA 112 376 376 ALA ALA A . n A 1 113 GLN 113 377 377 GLN GLN A . n A 1 114 GLU 114 378 378 GLU GLU A . n A 1 115 ARG 115 379 379 ARG ARG A . n A 1 116 GLY 116 380 380 GLY GLY A . n A 1 117 PHE 117 381 381 PHE PHE A . n A 1 118 LYS 118 382 382 LYS LYS A . n A 1 119 VAL 119 383 383 VAL VAL A . n A 1 120 SER 120 384 384 SER SER A . n A 1 121 PHE 121 385 385 PHE PHE A . n A 1 122 TYR 122 386 386 TYR TYR A . n A 1 123 ASP 123 387 387 ASP ASP A . n A 1 124 ARG 124 388 388 ARG ARG A . n A 1 125 ARG 125 389 389 ARG ARG A . n A 1 126 GLU 126 390 390 GLU GLU A . n A 1 127 GLU 127 391 391 GLU GLU A . n A 1 128 PRO 128 392 392 PRO PRO A . n A 1 129 GLU 129 393 393 GLU GLU A . n A 1 130 GLU 130 394 394 GLU GLU A . n A 1 131 ILE 131 395 395 ILE ILE A . n A 1 132 LYS 132 396 396 LYS LYS A . n A 1 133 ALA 133 397 397 ALA ALA A . n A 1 134 LYS 134 398 398 LYS LYS A . n A 1 135 GLU 135 399 399 GLU GLU A . n A 1 136 GLY 136 400 400 GLY GLY A . n A 1 137 ALA 137 401 401 ALA ALA A . n A 1 138 THR 138 402 402 THR THR A . n A 1 139 ILE 139 403 403 ILE ILE A . n A 1 140 PRO 140 404 404 PRO PRO A . n A 1 141 TRP 141 405 405 TRP TRP A . n A 1 142 GLY 142 406 406 GLY GLY A . n A 1 143 ILE 143 407 407 ILE ILE A . n A 1 144 GLU 144 408 408 GLU GLU A . n A 1 145 THR 145 409 409 THR THR A . n A 1 146 ALA 146 410 410 ALA ALA A . n A 1 147 ILE 147 411 411 ILE ILE A . n A 1 148 LYS 148 412 412 LYS LYS A . n A 1 149 ARG 149 413 413 ARG ARG A . n A 1 150 ILE 150 414 414 ILE ILE A . n A 1 151 LYS 151 415 415 LYS LYS A . n A 1 152 GLU 152 416 416 GLU GLU A . n A 1 153 ARG 153 417 417 ARG ARG A . n A 1 154 PRO 154 418 418 PRO PRO A . n A 1 155 ASP 155 419 419 ASP ASP A . n A 1 156 ILE 156 420 420 ILE ILE A . n A 1 157 ILE 157 421 421 ILE ILE A . n A 1 158 TYR 158 422 422 TYR TYR A . n A 1 159 HIS 159 423 423 HIS HIS A . n A 1 160 LEU 160 424 424 LEU LEU A . n A 1 161 GLY 161 425 425 GLY GLY A . n A 1 162 ASP 162 426 426 ASP ASP A . n A 1 163 VAL 163 427 427 VAL VAL A . n A 1 164 GLY 164 428 428 GLY GLY A . n A 1 165 LYS 165 429 429 LYS LYS A . n A 1 166 GLU 166 430 430 GLU GLU A . n A 1 167 PRO 167 431 431 PRO PRO A . n A 1 168 MSE 168 432 432 MSE MSE A . n A 1 169 ILE 169 433 433 ILE ILE A . n A 1 170 LEU 170 434 434 LEU LEU A . n A 1 171 VAL 171 435 435 VAL VAL A . n A 1 172 PHE 172 436 436 PHE PHE A . n A 1 173 GLY 173 437 437 GLY GLY A . n A 1 174 ARG 174 438 438 ARG ARG A . n A 1 175 ASN 175 439 439 ASN ASN A . n A 1 176 PRO 176 440 440 PRO PRO A . n A 1 177 ARG 177 441 441 ARG ARG A . n A 1 178 GLU 178 442 442 GLU GLU A . n A 1 179 VAL 179 443 443 VAL VAL A . n A 1 180 LEU 180 444 444 LEU LEU A . n A 1 181 GLU 181 445 445 GLU GLU A . n A 1 182 LYS 182 446 446 LYS LYS A . n A 1 183 ILE 183 447 447 ILE ILE A . n A 1 184 LYS 184 448 448 LYS LYS A . n A 1 185 MSE 185 449 449 MSE MSE A . n A 1 186 LEU 186 450 450 LEU LEU A . n A 1 187 ILE 187 451 451 ILE ILE A . n A 1 188 GLU 188 452 ? ? ? A . n A 1 189 GLY 189 453 ? ? ? A . n A 1 190 HIS 190 454 ? ? ? A . n A 1 191 HIS 191 455 ? ? ? A . n A 1 192 HIS 192 456 ? ? ? A . n A 1 193 HIS 193 457 ? ? ? A . n A 1 194 HIS 194 458 ? ? ? A . n A 1 195 HIS 195 459 ? ? ? A . n B 1 1 MSE 1 265 ? ? ? B . n B 1 2 SER 2 266 ? ? ? B . n B 1 3 LEU 3 267 ? ? ? B . n B 1 4 GLU 4 268 268 GLU GLU B . n B 1 5 LYS 5 269 269 LYS LYS B . n B 1 6 TRP 6 270 270 TRP TRP B . n B 1 7 ARG 7 271 271 ARG ARG B . n B 1 8 ILE 8 272 272 ILE ILE B . n B 1 9 TYR 9 273 273 TYR TYR B . n B 1 10 GLU 10 274 274 GLU GLU B . n B 1 11 GLU 11 275 275 GLU GLU B . n B 1 12 LEU 12 276 276 LEU LEU B . n B 1 13 THR 13 277 277 THR THR B . n B 1 14 ASN 14 278 278 ASN ASN B . n B 1 15 ALA 15 279 279 ALA ALA B . n B 1 16 VAL 16 280 280 VAL VAL B . n B 1 17 ARG 17 281 281 ARG ARG B . n B 1 18 GLU 18 282 282 GLU GLU B . n B 1 19 PHE 19 283 283 PHE PHE B . n B 1 20 GLU 20 284 284 GLU GLU B . n B 1 21 SER 21 285 285 SER SER B . n B 1 22 ILE 22 286 286 ILE ILE B . n B 1 23 ASN 23 287 287 ASN ASN B . n B 1 24 PRO 24 288 288 PRO PRO B . n B 1 25 VAL 25 289 289 VAL VAL B . n B 1 26 ARG 26 290 290 ARG ARG B . n B 1 27 LEU 27 291 291 LEU LEU B . n B 1 28 ILE 28 292 292 ILE ILE B . n B 1 29 PRO 29 293 293 PRO PRO B . n B 1 30 GLU 30 294 294 GLU GLU B . n B 1 31 VAL 31 295 295 VAL VAL B . n B 1 32 GLY 32 296 296 GLY GLY B . n B 1 33 THR 33 297 297 THR THR B . n B 1 34 ASN 34 298 298 ASN ASN B . n B 1 35 PHE 35 299 299 PHE PHE B . n B 1 36 VAL 36 300 300 VAL VAL B . n B 1 37 TYR 37 301 301 TYR TYR B . n B 1 38 SER 38 302 302 SER SER B . n B 1 39 LEU 39 303 303 LEU LEU B . n B 1 40 PRO 40 304 304 PRO PRO B . n B 1 41 LEU 41 305 305 LEU LEU B . n B 1 42 PRO 42 306 306 PRO PRO B . n B 1 43 TYR 43 307 307 TYR TYR B . n B 1 44 ALA 44 308 308 ALA ALA B . n B 1 45 ARG 45 309 309 ARG ARG B . n B 1 46 SER 46 310 310 SER SER B . n B 1 47 THR 47 311 311 THR THR B . n B 1 48 LYS 48 312 312 LYS LYS B . n B 1 49 ASP 49 313 313 ASP ASP B . n B 1 50 VAL 50 314 314 VAL VAL B . n B 1 51 ALA 51 315 315 ALA ALA B . n B 1 52 GLY 52 316 316 GLY GLY B . n B 1 53 VAL 53 317 317 VAL VAL B . n B 1 54 LYS 54 318 318 LYS LYS B . n B 1 55 GLY 55 319 319 GLY GLY B . n B 1 56 ARG 56 320 320 ARG ARG B . n B 1 57 ILE 57 321 321 ILE ILE B . n B 1 58 VAL 58 322 322 VAL VAL B . n B 1 59 LYS 59 323 323 LYS LYS B . n B 1 60 TYR 60 324 324 TYR TYR B . n B 1 61 GLY 61 325 325 GLY GLY B . n B 1 62 ASN 62 326 326 ASN ASN B . n B 1 63 SER 63 327 327 SER SER B . n B 1 64 VAL 64 328 328 VAL VAL B . n B 1 65 LYS 65 329 329 LYS LYS B . n B 1 66 ALA 66 330 330 ALA ALA B . n B 1 67 VAL 67 331 331 VAL VAL B . n B 1 68 GLY 68 332 332 GLY GLY B . n B 1 69 PRO 69 333 333 PRO PRO B . n B 1 70 VAL 70 334 334 VAL VAL B . n B 1 71 GLU 71 335 335 GLU GLU B . n B 1 72 PHE 72 336 336 PHE PHE B . n B 1 73 GLY 73 337 337 GLY GLY B . n B 1 74 ALA 74 338 338 ALA ALA B . n B 1 75 SER 75 339 339 SER SER B . n B 1 76 ASP 76 340 340 ASP ASP B . n B 1 77 HIS 77 341 341 HIS HIS B . n B 1 78 LEU 78 342 342 LEU LEU B . n B 1 79 ALA 79 343 343 ALA ALA B . n B 1 80 ARG 80 344 344 ARG ARG B . n B 1 81 ALA 81 345 345 ALA ALA B . n B 1 82 VAL 82 346 346 VAL VAL B . n B 1 83 LEU 83 347 347 LEU LEU B . n B 1 84 THR 84 348 348 THR THR B . n B 1 85 TYR 85 349 349 TYR TYR B . n B 1 86 MSE 86 350 350 MSE MSE B . n B 1 87 ARG 87 351 351 ARG ARG B . n B 1 88 PHE 88 352 352 PHE PHE B . n B 1 89 TYR 89 353 353 TYR TYR B . n B 1 90 PRO 90 354 354 PRO PRO B . n B 1 91 GLU 91 355 355 GLU GLU B . n B 1 92 TYR 92 356 356 TYR TYR B . n B 1 93 ARG 93 357 357 ARG ARG B . n B 1 94 SER 94 358 358 SER SER B . n B 1 95 ALA 95 359 359 ALA ALA B . n B 1 96 ILE 96 360 360 ILE ILE B . n B 1 97 ASN 97 361 361 ASN ASN B . n B 1 98 ILE 98 362 362 ILE ILE B . n B 1 99 ARG 99 363 363 ARG ARG B . n B 1 100 TYR 100 364 364 TYR TYR B . n B 1 101 SER 101 365 365 SER SER B . n B 1 102 ARG 102 366 366 ARG ARG B . n B 1 103 GLU 103 367 367 GLU GLU B . n B 1 104 ILE 104 368 368 ILE ILE B . n B 1 105 ILE 105 369 369 ILE ILE B . n B 1 106 GLU 106 370 370 GLU GLU B . n B 1 107 GLU 107 371 371 GLU GLU B . n B 1 108 ILE 108 372 372 ILE ILE B . n B 1 109 ILE 109 373 373 ILE ILE B . n B 1 110 GLU 110 374 374 GLU GLU B . n B 1 111 ILE 111 375 375 ILE ILE B . n B 1 112 ALA 112 376 376 ALA ALA B . n B 1 113 GLN 113 377 377 GLN GLN B . n B 1 114 GLU 114 378 378 GLU GLU B . n B 1 115 ARG 115 379 379 ARG ARG B . n B 1 116 GLY 116 380 380 GLY GLY B . n B 1 117 PHE 117 381 381 PHE PHE B . n B 1 118 LYS 118 382 382 LYS LYS B . n B 1 119 VAL 119 383 383 VAL VAL B . n B 1 120 SER 120 384 384 SER SER B . n B 1 121 PHE 121 385 385 PHE PHE B . n B 1 122 TYR 122 386 386 TYR TYR B . n B 1 123 ASP 123 387 387 ASP ASP B . n B 1 124 ARG 124 388 388 ARG ARG B . n B 1 125 ARG 125 389 389 ARG ARG B . n B 1 126 GLU 126 390 390 GLU GLU B . n B 1 127 GLU 127 391 391 GLU GLU B . n B 1 128 PRO 128 392 392 PRO PRO B . n B 1 129 GLU 129 393 393 GLU GLU B . n B 1 130 GLU 130 394 394 GLU GLU B . n B 1 131 ILE 131 395 395 ILE ILE B . n B 1 132 LYS 132 396 396 LYS LYS B . n B 1 133 ALA 133 397 397 ALA ALA B . n B 1 134 LYS 134 398 398 LYS LYS B . n B 1 135 GLU 135 399 399 GLU GLU B . n B 1 136 GLY 136 400 400 GLY GLY B . n B 1 137 ALA 137 401 401 ALA ALA B . n B 1 138 THR 138 402 402 THR THR B . n B 1 139 ILE 139 403 403 ILE ILE B . n B 1 140 PRO 140 404 404 PRO PRO B . n B 1 141 TRP 141 405 405 TRP TRP B . n B 1 142 GLY 142 406 406 GLY GLY B . n B 1 143 ILE 143 407 407 ILE ILE B . n B 1 144 GLU 144 408 408 GLU GLU B . n B 1 145 THR 145 409 409 THR THR B . n B 1 146 ALA 146 410 410 ALA ALA B . n B 1 147 ILE 147 411 411 ILE ILE B . n B 1 148 LYS 148 412 412 LYS LYS B . n B 1 149 ARG 149 413 413 ARG ARG B . n B 1 150 ILE 150 414 414 ILE ILE B . n B 1 151 LYS 151 415 415 LYS LYS B . n B 1 152 GLU 152 416 416 GLU GLU B . n B 1 153 ARG 153 417 417 ARG ARG B . n B 1 154 PRO 154 418 418 PRO PRO B . n B 1 155 ASP 155 419 419 ASP ASP B . n B 1 156 ILE 156 420 420 ILE ILE B . n B 1 157 ILE 157 421 421 ILE ILE B . n B 1 158 TYR 158 422 422 TYR TYR B . n B 1 159 HIS 159 423 423 HIS HIS B . n B 1 160 LEU 160 424 424 LEU LEU B . n B 1 161 GLY 161 425 425 GLY GLY B . n B 1 162 ASP 162 426 426 ASP ASP B . n B 1 163 VAL 163 427 427 VAL VAL B . n B 1 164 GLY 164 428 428 GLY GLY B . n B 1 165 LYS 165 429 429 LYS LYS B . n B 1 166 GLU 166 430 430 GLU GLU B . n B 1 167 PRO 167 431 431 PRO PRO B . n B 1 168 MSE 168 432 432 MSE MSE B . n B 1 169 ILE 169 433 433 ILE ILE B . n B 1 170 LEU 170 434 434 LEU LEU B . n B 1 171 VAL 171 435 435 VAL VAL B . n B 1 172 PHE 172 436 436 PHE PHE B . n B 1 173 GLY 173 437 437 GLY GLY B . n B 1 174 ARG 174 438 438 ARG ARG B . n B 1 175 ASN 175 439 439 ASN ASN B . n B 1 176 PRO 176 440 440 PRO PRO B . n B 1 177 ARG 177 441 441 ARG ARG B . n B 1 178 GLU 178 442 442 GLU GLU B . n B 1 179 VAL 179 443 443 VAL VAL B . n B 1 180 LEU 180 444 444 LEU LEU B . n B 1 181 GLU 181 445 445 GLU GLU B . n B 1 182 LYS 182 446 446 LYS LYS B . n B 1 183 ILE 183 447 447 ILE ILE B . n B 1 184 LYS 184 448 448 LYS LYS B . n B 1 185 MSE 185 449 449 MSE MSE B . n B 1 186 LEU 186 450 450 LEU LEU B . n B 1 187 ILE 187 451 451 ILE ILE B . n B 1 188 GLU 188 452 ? ? ? B . n B 1 189 GLY 189 453 ? ? ? B . n B 1 190 HIS 190 454 ? ? ? B . n B 1 191 HIS 191 455 ? ? ? B . n B 1 192 HIS 192 456 ? ? ? B . n B 1 193 HIS 193 457 ? ? ? B . n B 1 194 HIS 194 458 ? ? ? B . n B 1 195 HIS 195 459 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 1 500 500 PO4 PO4 A . D 2 PO4 1 500 500 PO4 PO4 B . E 3 HOH 1 1 1 HOH HOH A . E 3 HOH 2 3 3 HOH HOH A . E 3 HOH 3 4 4 HOH HOH A . E 3 HOH 4 8 8 HOH HOH A . E 3 HOH 5 12 12 HOH HOH A . E 3 HOH 6 13 13 HOH HOH A . E 3 HOH 7 14 14 HOH HOH A . E 3 HOH 8 20 20 HOH HOH A . E 3 HOH 9 22 22 HOH HOH A . E 3 HOH 10 25 25 HOH HOH A . E 3 HOH 11 29 29 HOH HOH A . E 3 HOH 12 30 30 HOH HOH A . E 3 HOH 13 32 32 HOH HOH A . E 3 HOH 14 33 33 HOH HOH A . E 3 HOH 15 35 35 HOH HOH A . E 3 HOH 16 36 36 HOH HOH A . E 3 HOH 17 39 39 HOH HOH A . E 3 HOH 18 42 42 HOH HOH A . E 3 HOH 19 43 43 HOH HOH A . E 3 HOH 20 46 46 HOH HOH A . E 3 HOH 21 48 48 HOH HOH A . E 3 HOH 22 53 53 HOH HOH A . F 3 HOH 1 2 2 HOH HOH B . F 3 HOH 2 5 5 HOH HOH B . F 3 HOH 3 6 6 HOH HOH B . F 3 HOH 4 7 7 HOH HOH B . F 3 HOH 5 9 9 HOH HOH B . F 3 HOH 6 10 10 HOH HOH B . F 3 HOH 7 11 11 HOH HOH B . F 3 HOH 8 15 15 HOH HOH B . F 3 HOH 9 16 16 HOH HOH B . F 3 HOH 10 17 17 HOH HOH B . F 3 HOH 11 18 18 HOH HOH B . F 3 HOH 12 19 19 HOH HOH B . F 3 HOH 13 21 21 HOH HOH B . F 3 HOH 14 23 23 HOH HOH B . F 3 HOH 15 24 24 HOH HOH B . F 3 HOH 16 26 26 HOH HOH B . F 3 HOH 17 27 27 HOH HOH B . F 3 HOH 18 28 28 HOH HOH B . F 3 HOH 19 31 31 HOH HOH B . F 3 HOH 20 34 34 HOH HOH B . F 3 HOH 21 37 37 HOH HOH B . F 3 HOH 22 38 38 HOH HOH B . F 3 HOH 23 40 40 HOH HOH B . F 3 HOH 24 41 41 HOH HOH B . F 3 HOH 25 44 44 HOH HOH B . F 3 HOH 26 45 45 HOH HOH B . F 3 HOH 27 47 47 HOH HOH B . F 3 HOH 28 49 49 HOH HOH B . F 3 HOH 29 50 50 HOH HOH B . F 3 HOH 30 51 51 HOH HOH B . F 3 HOH 31 52 52 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 377 ? CG ? A GLN 113 CG 2 1 Y 1 A GLN 377 ? CD ? A GLN 113 CD 3 1 Y 1 A GLN 377 ? OE1 ? A GLN 113 OE1 4 1 Y 1 A GLN 377 ? NE2 ? A GLN 113 NE2 5 1 Y 1 A GLU 394 ? CG ? A GLU 130 CG 6 1 Y 1 A GLU 394 ? CD ? A GLU 130 CD 7 1 Y 1 A GLU 394 ? OE1 ? A GLU 130 OE1 8 1 Y 1 A GLU 394 ? OE2 ? A GLU 130 OE2 9 1 Y 1 A LYS 398 ? CG ? A LYS 134 CG 10 1 Y 1 A LYS 398 ? CD ? A LYS 134 CD 11 1 Y 1 A LYS 398 ? CE ? A LYS 134 CE 12 1 Y 1 A LYS 398 ? NZ ? A LYS 134 NZ 13 1 Y 1 A GLU 399 ? CG ? A GLU 135 CG 14 1 Y 1 A GLU 399 ? CD ? A GLU 135 CD 15 1 Y 1 A GLU 399 ? OE1 ? A GLU 135 OE1 16 1 Y 1 A GLU 399 ? OE2 ? A GLU 135 OE2 17 1 Y 1 A LYS 415 ? CG ? A LYS 151 CG 18 1 Y 1 A LYS 415 ? CD ? A LYS 151 CD 19 1 Y 1 A LYS 415 ? CE ? A LYS 151 CE 20 1 Y 1 A LYS 415 ? NZ ? A LYS 151 NZ 21 1 Y 1 A ARG 441 ? CG ? A ARG 177 CG 22 1 Y 1 A ARG 441 ? CD ? A ARG 177 CD 23 1 Y 1 A ARG 441 ? NE ? A ARG 177 NE 24 1 Y 1 A ARG 441 ? CZ ? A ARG 177 CZ 25 1 Y 1 A ARG 441 ? NH1 ? A ARG 177 NH1 26 1 Y 1 A ARG 441 ? NH2 ? A ARG 177 NH2 27 1 Y 1 B ARG 271 ? CG ? B ARG 7 CG 28 1 Y 1 B ARG 271 ? CD ? B ARG 7 CD 29 1 Y 1 B ARG 271 ? NE ? B ARG 7 NE 30 1 Y 1 B ARG 271 ? CZ ? B ARG 7 CZ 31 1 Y 1 B ARG 271 ? NH1 ? B ARG 7 NH1 32 1 Y 1 B ARG 271 ? NH2 ? B ARG 7 NH2 33 1 Y 1 B ARG 309 ? CG ? B ARG 45 CG 34 1 Y 1 B ARG 309 ? CD ? B ARG 45 CD 35 1 Y 1 B ARG 309 ? NE ? B ARG 45 NE 36 1 Y 1 B ARG 309 ? CZ ? B ARG 45 CZ 37 1 Y 1 B ARG 309 ? NH1 ? B ARG 45 NH1 38 1 Y 1 B ARG 309 ? NH2 ? B ARG 45 NH2 39 1 Y 1 B LYS 312 ? CG ? B LYS 48 CG 40 1 Y 1 B LYS 312 ? CD ? B LYS 48 CD 41 1 Y 1 B LYS 312 ? CE ? B LYS 48 CE 42 1 Y 1 B LYS 312 ? NZ ? B LYS 48 NZ 43 1 Y 1 B GLN 377 ? CG ? B GLN 113 CG 44 1 Y 1 B GLN 377 ? CD ? B GLN 113 CD 45 1 Y 1 B GLN 377 ? OE1 ? B GLN 113 OE1 46 1 Y 1 B GLN 377 ? NE2 ? B GLN 113 NE2 47 1 Y 1 B GLU 394 ? CG ? B GLU 130 CG 48 1 Y 1 B GLU 394 ? CD ? B GLU 130 CD 49 1 Y 1 B GLU 394 ? OE1 ? B GLU 130 OE1 50 1 Y 1 B GLU 394 ? OE2 ? B GLU 130 OE2 51 1 Y 1 B LYS 398 ? CG ? B LYS 134 CG 52 1 Y 1 B LYS 398 ? CD ? B LYS 134 CD 53 1 Y 1 B LYS 398 ? CE ? B LYS 134 CE 54 1 Y 1 B LYS 398 ? NZ ? B LYS 134 NZ 55 1 Y 1 B GLU 399 ? CG ? B GLU 135 CG 56 1 Y 1 B GLU 399 ? CD ? B GLU 135 CD 57 1 Y 1 B GLU 399 ? OE1 ? B GLU 135 OE1 58 1 Y 1 B GLU 399 ? OE2 ? B GLU 135 OE2 59 1 Y 1 B LYS 415 ? CG ? B LYS 151 CG 60 1 Y 1 B LYS 415 ? CD ? B LYS 151 CD 61 1 Y 1 B LYS 415 ? CE ? B LYS 151 CE 62 1 Y 1 B LYS 415 ? NZ ? B LYS 151 NZ 63 1 Y 1 B ARG 441 ? CG ? B ARG 177 CG 64 1 Y 1 B ARG 441 ? CD ? B ARG 177 CD 65 1 Y 1 B ARG 441 ? NE ? B ARG 177 NE 66 1 Y 1 B ARG 441 ? CZ ? B ARG 177 CZ 67 1 Y 1 B ARG 441 ? NH1 ? B ARG 177 NH1 68 1 Y 1 B ARG 441 ? NH2 ? B ARG 177 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SOLVE phasing . ? 2 SHARP phasing . ? 3 CNS refinement 1.1 ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 # _cell.entry_id 2PB9 _cell.length_a 78.126 _cell.length_b 78.126 _cell.length_c 155.388 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PB9 _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2PB9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '2.0M Sodium formate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-03-13 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97950 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97950 # _reflns.entry_id 2PB9 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 50.0 _reflns.number_all 13846 _reflns.number_obs 13846 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.121 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 24.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.484 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 13.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1328 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2PB9 _refine.ls_d_res_high 2.7 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I 0.0 _refine.ls_number_reflns_all 13172 _refine.ls_number_reflns_obs 13172 _refine.ls_number_reflns_R_free 523 _refine.ls_percent_reflns_obs 94.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2342 _refine.ls_R_factor_R_work 0.2342 _refine.ls_R_factor_R_free 0.2911 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 5.51 _refine.aniso_B[1][2] 0.0 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][2] 5.51 _refine.aniso_B[2][3] 0.0 _refine.aniso_B[3][3] -11.03 _refine.details ;Residues listed as missing in Remark 465 are due to lack of electron density. Residues with missing atoms listed in Remark 470 are due to lack of electron density and modeled as alanines. ; _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2PB9 _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.37 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_sigma_a_free 0.38 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2942 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 53 _refine_hist.number_atoms_total 3005 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.37014 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.87 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.318 _refine_ls_shell.percent_reflns_obs 85.6 _refine_ls_shell.R_factor_R_free 0.386 _refine_ls_shell.R_factor_R_free_error 0.042 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1835 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2PB9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2PB9 _struct.title 'Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PB9 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;phosphate, psi2, 10417c, NYSGXRC, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8U193_PYRFU _struct_ref.pdbx_db_accession Q8U193 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EKWRIYEELTNAVREFESINPVRLIPEVGTNFVYSLPLPYARSTKDVAGVKGRIVKYGNSVKAVGPVEFGASDHLARAVL TYMRFYPEYRSAINIRYSREIIEEIIEIAQERGFKVSFYDRREEPEEIKAKEGATIPWGIETAIKRIKERPDIIYHLGDV GKEPMILVFGRNPREVLEKIKMLI ; _struct_ref.pdbx_align_begin 268 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PB9 A 4 ? 187 ? Q8U193 268 ? 451 ? 268 451 2 1 2PB9 B 4 ? 187 ? Q8U193 268 ? 451 ? 268 451 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PB9 MSE A 1 ? UNP Q8U193 ? ? 'cloning artifact' 265 1 1 2PB9 SER A 2 ? UNP Q8U193 ? ? 'cloning artifact' 266 2 1 2PB9 LEU A 3 ? UNP Q8U193 ? ? 'cloning artifact' 267 3 1 2PB9 MSE A 86 ? UNP Q8U193 MET 350 'modified residue' 350 4 1 2PB9 MSE A 168 ? UNP Q8U193 MET 432 'modified residue' 432 5 1 2PB9 MSE A 185 ? UNP Q8U193 MET 449 'modified residue' 449 6 1 2PB9 GLU A 188 ? UNP Q8U193 ? ? 'cloning artifact' 452 7 1 2PB9 GLY A 189 ? UNP Q8U193 ? ? 'cloning artifact' 453 8 1 2PB9 HIS A 190 ? UNP Q8U193 ? ? 'cloning artifact' 454 9 1 2PB9 HIS A 191 ? UNP Q8U193 ? ? 'cloning artifact' 455 10 1 2PB9 HIS A 192 ? UNP Q8U193 ? ? 'cloning artifact' 456 11 1 2PB9 HIS A 193 ? UNP Q8U193 ? ? 'cloning artifact' 457 12 1 2PB9 HIS A 194 ? UNP Q8U193 ? ? 'cloning artifact' 458 13 1 2PB9 HIS A 195 ? UNP Q8U193 ? ? 'cloning artifact' 459 14 2 2PB9 MSE B 1 ? UNP Q8U193 ? ? 'cloning artifact' 265 15 2 2PB9 SER B 2 ? UNP Q8U193 ? ? 'cloning artifact' 266 16 2 2PB9 LEU B 3 ? UNP Q8U193 ? ? 'cloning artifact' 267 17 2 2PB9 MSE B 86 ? UNP Q8U193 MET 350 'modified residue' 350 18 2 2PB9 MSE B 168 ? UNP Q8U193 MET 432 'modified residue' 432 19 2 2PB9 MSE B 185 ? UNP Q8U193 MET 449 'modified residue' 449 20 2 2PB9 GLU B 188 ? UNP Q8U193 ? ? 'cloning artifact' 452 21 2 2PB9 GLY B 189 ? UNP Q8U193 ? ? 'cloning artifact' 453 22 2 2PB9 HIS B 190 ? UNP Q8U193 ? ? 'cloning artifact' 454 23 2 2PB9 HIS B 191 ? UNP Q8U193 ? ? 'cloning artifact' 455 24 2 2PB9 HIS B 192 ? UNP Q8U193 ? ? 'cloning artifact' 456 25 2 2PB9 HIS B 193 ? UNP Q8U193 ? ? 'cloning artifact' 457 26 2 2PB9 HIS B 194 ? UNP Q8U193 ? ? 'cloning artifact' 458 27 2 2PB9 HIS B 195 ? UNP Q8U193 ? ? 'cloning artifact' 459 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 78.1260000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 4 ? ILE A 22 ? GLU A 268 ILE A 286 1 ? 19 HELX_P HELX_P2 2 SER A 46 ? LYS A 48 ? SER A 310 LYS A 312 5 ? 3 HELX_P HELX_P3 3 ASP A 76 ? ARG A 87 ? ASP A 340 ARG A 351 1 ? 12 HELX_P HELX_P4 4 SER A 101 ? ARG A 115 ? SER A 365 ARG A 379 1 ? 15 HELX_P HELX_P5 5 ASP A 123 ? GLU A 127 ? ASP A 387 GLU A 391 5 ? 5 HELX_P HELX_P6 6 PRO A 128 ? LYS A 134 ? PRO A 392 LYS A 398 1 ? 7 HELX_P HELX_P7 7 ALA A 137 ? ILE A 150 ? ALA A 401 ILE A 414 1 ? 14 HELX_P HELX_P8 8 ASN A 175 ? LEU A 186 ? ASN A 439 LEU A 450 1 ? 12 HELX_P HELX_P9 9 GLU B 4 ? ASN B 23 ? GLU B 268 ASN B 287 1 ? 20 HELX_P HELX_P10 10 PRO B 24 ? ILE B 28 ? PRO B 288 ILE B 292 5 ? 5 HELX_P HELX_P11 11 SER B 46 ? LYS B 48 ? SER B 310 LYS B 312 5 ? 3 HELX_P HELX_P12 12 ASP B 76 ? TYR B 89 ? ASP B 340 TYR B 353 1 ? 14 HELX_P HELX_P13 13 SER B 101 ? ARG B 115 ? SER B 365 ARG B 379 1 ? 15 HELX_P HELX_P14 14 PRO B 128 ? LYS B 134 ? PRO B 392 LYS B 398 1 ? 7 HELX_P HELX_P15 15 ALA B 137 ? ARG B 149 ? ALA B 401 ARG B 413 1 ? 13 HELX_P HELX_P16 16 ASN B 175 ? ILE B 187 ? ASN B 439 ILE B 451 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 85 C ? ? ? 1_555 A MSE 86 N ? ? A TYR 349 A MSE 350 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A MSE 86 C ? ? ? 1_555 A ARG 87 N ? ? A MSE 350 A ARG 351 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A PRO 167 C ? ? ? 1_555 A MSE 168 N ? ? A PRO 431 A MSE 432 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? A MSE 168 C ? ? ? 1_555 A ILE 169 N ? ? A MSE 432 A ILE 433 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale5 covale both ? A LYS 184 C ? ? ? 1_555 A MSE 185 N ? ? A LYS 448 A MSE 449 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? A MSE 185 C ? ? ? 1_555 A LEU 186 N ? ? A MSE 449 A LEU 450 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? B TYR 85 C ? ? ? 1_555 B MSE 86 N ? ? B TYR 349 B MSE 350 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? B MSE 86 C ? ? ? 1_555 B ARG 87 N ? ? B MSE 350 B ARG 351 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? B PRO 167 C ? ? ? 1_555 B MSE 168 N ? ? B PRO 431 B MSE 432 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale10 covale both ? B MSE 168 C ? ? ? 1_555 B ILE 169 N ? ? B MSE 432 B ILE 433 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? B LYS 184 C ? ? ? 1_555 B MSE 185 N ? ? B LYS 448 B MSE 449 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale12 covale both ? B MSE 185 C ? ? ? 1_555 B LEU 186 N ? ? B MSE 449 B LEU 450 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 86 ? . . . . MSE A 350 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 168 ? . . . . MSE A 432 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 185 ? . . . . MSE A 449 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE B 86 ? . . . . MSE B 350 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE B 168 ? . . . . MSE B 432 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE B 185 ? . . . . MSE B 449 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 41 A . ? LEU 305 A PRO 42 A ? PRO 306 A 1 0.20 2 LEU 41 B . ? LEU 305 B PRO 42 B ? PRO 306 B 1 0.16 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 7 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 70 ? PHE A 72 ? VAL A 334 PHE A 336 A 2 VAL A 50 ? VAL A 53 ? VAL A 314 VAL A 317 A 3 PHE A 35 ? SER A 38 ? PHE A 299 SER A 302 A 4 SER A 94 ? ILE A 98 ? SER A 358 ILE A 362 A 5 MSE A 168 ? GLY A 173 ? MSE A 432 GLY A 437 A 6 PRO A 154 ? HIS A 159 ? PRO A 418 HIS A 423 A 7 LYS A 118 ? PHE A 121 ? LYS A 382 PHE A 385 B 1 ILE A 57 ? LYS A 59 ? ILE A 321 LYS A 323 B 2 VAL A 64 ? ALA A 66 ? VAL A 328 ALA A 330 C 1 VAL B 70 ? PHE B 72 ? VAL B 334 PHE B 336 C 2 VAL B 50 ? VAL B 53 ? VAL B 314 VAL B 317 C 3 PHE B 35 ? SER B 38 ? PHE B 299 SER B 302 C 4 SER B 94 ? ILE B 98 ? SER B 358 ILE B 362 C 5 MSE B 168 ? GLY B 173 ? MSE B 432 GLY B 437 C 6 ILE B 156 ? HIS B 159 ? ILE B 420 HIS B 423 C 7 VAL B 119 ? PHE B 121 ? VAL B 383 PHE B 385 D 1 ILE B 57 ? LYS B 59 ? ILE B 321 LYS B 323 D 2 VAL B 64 ? ALA B 66 ? VAL B 328 ALA B 330 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 71 ? O GLU A 335 N GLY A 52 ? N GLY A 316 A 2 3 O ALA A 51 ? O ALA A 315 N TYR A 37 ? N TYR A 301 A 3 4 N VAL A 36 ? N VAL A 300 O ALA A 95 ? O ALA A 359 A 4 5 N ILE A 98 ? N ILE A 362 O ILE A 169 ? O ILE A 433 A 5 6 O LEU A 170 ? O LEU A 434 N ILE A 157 ? N ILE A 421 A 6 7 O ILE A 156 ? O ILE A 420 N SER A 120 ? N SER A 384 B 1 2 N VAL A 58 ? N VAL A 322 O LYS A 65 ? O LYS A 329 C 1 2 O GLU B 71 ? O GLU B 335 N GLY B 52 ? N GLY B 316 C 2 3 O ALA B 51 ? O ALA B 315 N TYR B 37 ? N TYR B 301 C 3 4 N VAL B 36 ? N VAL B 300 O ALA B 95 ? O ALA B 359 C 4 5 N ILE B 98 ? N ILE B 362 O ILE B 169 ? O ILE B 433 C 5 6 O LEU B 170 ? O LEU B 434 N ILE B 157 ? N ILE B 421 C 6 7 O ILE B 156 ? O ILE B 420 N SER B 120 ? N SER B 384 D 1 2 N VAL B 58 ? N VAL B 322 O LYS B 65 ? O LYS B 329 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 500 ? 6 'BINDING SITE FOR RESIDUE PO4 A 500' AC2 Software B PO4 500 ? 7 'BINDING SITE FOR RESIDUE PO4 B 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASN A 34 ? ASN A 298 . ? 1_555 ? 2 AC1 6 ARG A 56 ? ARG A 320 . ? 1_555 ? 3 AC1 6 SER A 75 ? SER A 339 . ? 1_555 ? 4 AC1 6 ASP A 76 ? ASP A 340 . ? 1_555 ? 5 AC1 6 HIS A 77 ? HIS A 341 . ? 1_555 ? 6 AC1 6 LEU A 78 ? LEU A 342 . ? 1_555 ? 7 AC2 7 HOH F . ? HOH B 26 . ? 1_555 ? 8 AC2 7 ASN B 34 ? ASN B 298 . ? 1_555 ? 9 AC2 7 ARG B 56 ? ARG B 320 . ? 1_555 ? 10 AC2 7 SER B 75 ? SER B 339 . ? 1_555 ? 11 AC2 7 ASP B 76 ? ASP B 340 . ? 1_555 ? 12 AC2 7 HIS B 77 ? HIS B 341 . ? 1_555 ? 13 AC2 7 LEU B 78 ? LEU B 342 . ? 1_555 ? # _pdbx_entry_details.entry_id 2PB9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 TYR _pdbx_validate_rmsd_angle.auth_seq_id_1 353 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 354 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 354 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.75 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.45 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 320 ? ? 58.53 -167.35 2 1 TYR A 324 ? ? -103.47 -113.12 3 1 ASN A 326 ? ? -98.19 43.82 4 1 GLU A 378 ? ? -60.57 -79.86 5 1 ARG A 379 ? ? -57.43 2.51 6 1 ASN B 287 ? ? 52.93 78.73 7 1 PRO B 288 ? ? -101.26 53.77 8 1 ALA B 308 ? ? -60.63 88.70 9 1 ARG B 320 ? ? 50.21 -167.00 10 1 TYR B 324 ? ? -97.07 -104.55 11 1 ASN B 326 ? ? -96.04 48.18 12 1 ASP B 340 ? ? -139.07 -57.13 13 1 SER B 365 ? ? -179.56 148.34 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 86 A MSE 350 ? MET SELENOMETHIONINE 2 A MSE 168 A MSE 432 ? MET SELENOMETHIONINE 3 A MSE 185 A MSE 449 ? MET SELENOMETHIONINE 4 B MSE 86 B MSE 350 ? MET SELENOMETHIONINE 5 B MSE 168 B MSE 432 ? MET SELENOMETHIONINE 6 B MSE 185 B MSE 449 ? MET SELENOMETHIONINE # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). THE BIOLOGICAL UNIT ASSEMBLY SHOWN IN REMARK 350 IS PREDICTED BY THE ANALYSIS OF PROTEIN INTERFACES BASED ON THIS CRYSTAL STRUCTURE. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 265 ? A MSE 1 2 1 Y 1 A SER 266 ? A SER 2 3 1 Y 1 A LEU 267 ? A LEU 3 4 1 Y 1 A GLU 452 ? A GLU 188 5 1 Y 1 A GLY 453 ? A GLY 189 6 1 Y 1 A HIS 454 ? A HIS 190 7 1 Y 1 A HIS 455 ? A HIS 191 8 1 Y 1 A HIS 456 ? A HIS 192 9 1 Y 1 A HIS 457 ? A HIS 193 10 1 Y 1 A HIS 458 ? A HIS 194 11 1 Y 1 A HIS 459 ? A HIS 195 12 1 Y 1 B MSE 265 ? B MSE 1 13 1 Y 1 B SER 266 ? B SER 2 14 1 Y 1 B LEU 267 ? B LEU 3 15 1 Y 1 B GLU 452 ? B GLU 188 16 1 Y 1 B GLY 453 ? B GLY 189 17 1 Y 1 B HIS 454 ? B HIS 190 18 1 Y 1 B HIS 455 ? B HIS 191 19 1 Y 1 B HIS 456 ? B HIS 192 20 1 Y 1 B HIS 457 ? B HIS 193 21 1 Y 1 B HIS 458 ? B HIS 194 22 1 Y 1 B HIS 459 ? B HIS 195 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 MSE N N N N 236 MSE CA C N S 237 MSE C C N N 238 MSE O O N N 239 MSE OXT O N N 240 MSE CB C N N 241 MSE CG C N N 242 MSE SE SE N N 243 MSE CE C N N 244 MSE H H N N 245 MSE H2 H N N 246 MSE HA H N N 247 MSE HXT H N N 248 MSE HB2 H N N 249 MSE HB3 H N N 250 MSE HG2 H N N 251 MSE HG3 H N N 252 MSE HE1 H N N 253 MSE HE2 H N N 254 MSE HE3 H N N 255 PHE N N N N 256 PHE CA C N S 257 PHE C C N N 258 PHE O O N N 259 PHE CB C N N 260 PHE CG C Y N 261 PHE CD1 C Y N 262 PHE CD2 C Y N 263 PHE CE1 C Y N 264 PHE CE2 C Y N 265 PHE CZ C Y N 266 PHE OXT O N N 267 PHE H H N N 268 PHE H2 H N N 269 PHE HA H N N 270 PHE HB2 H N N 271 PHE HB3 H N N 272 PHE HD1 H N N 273 PHE HD2 H N N 274 PHE HE1 H N N 275 PHE HE2 H N N 276 PHE HZ H N N 277 PHE HXT H N N 278 PO4 P P N N 279 PO4 O1 O N N 280 PO4 O2 O N N 281 PO4 O3 O N N 282 PO4 O4 O N N 283 PRO N N N N 284 PRO CA C N S 285 PRO C C N N 286 PRO O O N N 287 PRO CB C N N 288 PRO CG C N N 289 PRO CD C N N 290 PRO OXT O N N 291 PRO H H N N 292 PRO HA H N N 293 PRO HB2 H N N 294 PRO HB3 H N N 295 PRO HG2 H N N 296 PRO HG3 H N N 297 PRO HD2 H N N 298 PRO HD3 H N N 299 PRO HXT H N N 300 SER N N N N 301 SER CA C N S 302 SER C C N N 303 SER O O N N 304 SER CB C N N 305 SER OG O N N 306 SER OXT O N N 307 SER H H N N 308 SER H2 H N N 309 SER HA H N N 310 SER HB2 H N N 311 SER HB3 H N N 312 SER HG H N N 313 SER HXT H N N 314 THR N N N N 315 THR CA C N S 316 THR C C N N 317 THR O O N N 318 THR CB C N R 319 THR OG1 O N N 320 THR CG2 C N N 321 THR OXT O N N 322 THR H H N N 323 THR H2 H N N 324 THR HA H N N 325 THR HB H N N 326 THR HG1 H N N 327 THR HG21 H N N 328 THR HG22 H N N 329 THR HG23 H N N 330 THR HXT H N N 331 TRP N N N N 332 TRP CA C N S 333 TRP C C N N 334 TRP O O N N 335 TRP CB C N N 336 TRP CG C Y N 337 TRP CD1 C Y N 338 TRP CD2 C Y N 339 TRP NE1 N Y N 340 TRP CE2 C Y N 341 TRP CE3 C Y N 342 TRP CZ2 C Y N 343 TRP CZ3 C Y N 344 TRP CH2 C Y N 345 TRP OXT O N N 346 TRP H H N N 347 TRP H2 H N N 348 TRP HA H N N 349 TRP HB2 H N N 350 TRP HB3 H N N 351 TRP HD1 H N N 352 TRP HE1 H N N 353 TRP HE3 H N N 354 TRP HZ2 H N N 355 TRP HZ3 H N N 356 TRP HH2 H N N 357 TRP HXT H N N 358 TYR N N N N 359 TYR CA C N S 360 TYR C C N N 361 TYR O O N N 362 TYR CB C N N 363 TYR CG C Y N 364 TYR CD1 C Y N 365 TYR CD2 C Y N 366 TYR CE1 C Y N 367 TYR CE2 C Y N 368 TYR CZ C Y N 369 TYR OH O N N 370 TYR OXT O N N 371 TYR H H N N 372 TYR H2 H N N 373 TYR HA H N N 374 TYR HB2 H N N 375 TYR HB3 H N N 376 TYR HD1 H N N 377 TYR HD2 H N N 378 TYR HE1 H N N 379 TYR HE2 H N N 380 TYR HH H N N 381 TYR HXT H N N 382 VAL N N N N 383 VAL CA C N S 384 VAL C C N N 385 VAL O O N N 386 VAL CB C N N 387 VAL CG1 C N N 388 VAL CG2 C N N 389 VAL OXT O N N 390 VAL H H N N 391 VAL H2 H N N 392 VAL HA H N N 393 VAL HB H N N 394 VAL HG11 H N N 395 VAL HG12 H N N 396 VAL HG13 H N N 397 VAL HG21 H N N 398 VAL HG22 H N N 399 VAL HG23 H N N 400 VAL HXT H N N 401 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 MSE N CA sing N N 224 MSE N H sing N N 225 MSE N H2 sing N N 226 MSE CA C sing N N 227 MSE CA CB sing N N 228 MSE CA HA sing N N 229 MSE C O doub N N 230 MSE C OXT sing N N 231 MSE OXT HXT sing N N 232 MSE CB CG sing N N 233 MSE CB HB2 sing N N 234 MSE CB HB3 sing N N 235 MSE CG SE sing N N 236 MSE CG HG2 sing N N 237 MSE CG HG3 sing N N 238 MSE SE CE sing N N 239 MSE CE HE1 sing N N 240 MSE CE HE2 sing N N 241 MSE CE HE3 sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PO4 P O1 doub N N 266 PO4 P O2 sing N N 267 PO4 P O3 sing N N 268 PO4 P O4 sing N N 269 PRO N CA sing N N 270 PRO N CD sing N N 271 PRO N H sing N N 272 PRO CA C sing N N 273 PRO CA CB sing N N 274 PRO CA HA sing N N 275 PRO C O doub N N 276 PRO C OXT sing N N 277 PRO CB CG sing N N 278 PRO CB HB2 sing N N 279 PRO CB HB3 sing N N 280 PRO CG CD sing N N 281 PRO CG HG2 sing N N 282 PRO CG HG3 sing N N 283 PRO CD HD2 sing N N 284 PRO CD HD3 sing N N 285 PRO OXT HXT sing N N 286 SER N CA sing N N 287 SER N H sing N N 288 SER N H2 sing N N 289 SER CA C sing N N 290 SER CA CB sing N N 291 SER CA HA sing N N 292 SER C O doub N N 293 SER C OXT sing N N 294 SER CB OG sing N N 295 SER CB HB2 sing N N 296 SER CB HB3 sing N N 297 SER OG HG sing N N 298 SER OXT HXT sing N N 299 THR N CA sing N N 300 THR N H sing N N 301 THR N H2 sing N N 302 THR CA C sing N N 303 THR CA CB sing N N 304 THR CA HA sing N N 305 THR C O doub N N 306 THR C OXT sing N N 307 THR CB OG1 sing N N 308 THR CB CG2 sing N N 309 THR CB HB sing N N 310 THR OG1 HG1 sing N N 311 THR CG2 HG21 sing N N 312 THR CG2 HG22 sing N N 313 THR CG2 HG23 sing N N 314 THR OXT HXT sing N N 315 TRP N CA sing N N 316 TRP N H sing N N 317 TRP N H2 sing N N 318 TRP CA C sing N N 319 TRP CA CB sing N N 320 TRP CA HA sing N N 321 TRP C O doub N N 322 TRP C OXT sing N N 323 TRP CB CG sing N N 324 TRP CB HB2 sing N N 325 TRP CB HB3 sing N N 326 TRP CG CD1 doub Y N 327 TRP CG CD2 sing Y N 328 TRP CD1 NE1 sing Y N 329 TRP CD1 HD1 sing N N 330 TRP CD2 CE2 doub Y N 331 TRP CD2 CE3 sing Y N 332 TRP NE1 CE2 sing Y N 333 TRP NE1 HE1 sing N N 334 TRP CE2 CZ2 sing Y N 335 TRP CE3 CZ3 doub Y N 336 TRP CE3 HE3 sing N N 337 TRP CZ2 CH2 doub Y N 338 TRP CZ2 HZ2 sing N N 339 TRP CZ3 CH2 sing Y N 340 TRP CZ3 HZ3 sing N N 341 TRP CH2 HH2 sing N N 342 TRP OXT HXT sing N N 343 TYR N CA sing N N 344 TYR N H sing N N 345 TYR N H2 sing N N 346 TYR CA C sing N N 347 TYR CA CB sing N N 348 TYR CA HA sing N N 349 TYR C O doub N N 350 TYR C OXT sing N N 351 TYR CB CG sing N N 352 TYR CB HB2 sing N N 353 TYR CB HB3 sing N N 354 TYR CG CD1 doub Y N 355 TYR CG CD2 sing Y N 356 TYR CD1 CE1 sing Y N 357 TYR CD1 HD1 sing N N 358 TYR CD2 CE2 doub Y N 359 TYR CD2 HD2 sing N N 360 TYR CE1 CZ doub Y N 361 TYR CE1 HE1 sing N N 362 TYR CE2 CZ sing Y N 363 TYR CE2 HE2 sing N N 364 TYR CZ OH sing N N 365 TYR OH HH sing N N 366 TYR OXT HXT sing N N 367 VAL N CA sing N N 368 VAL N H sing N N 369 VAL N H2 sing N N 370 VAL CA C sing N N 371 VAL CA CB sing N N 372 VAL CA HA sing N N 373 VAL C O doub N N 374 VAL C OXT sing N N 375 VAL CB CG1 sing N N 376 VAL CB CG2 sing N N 377 VAL CB HB sing N N 378 VAL CG1 HG11 sing N N 379 VAL CG1 HG12 sing N N 380 VAL CG1 HG13 sing N N 381 VAL CG2 HG21 sing N N 382 VAL CG2 HG22 sing N N 383 VAL CG2 HG23 sing N N 384 VAL OXT HXT sing N N 385 # _atom_sites.entry_id 2PB9 _atom_sites.fract_transf_matrix[1][1] 0.012800 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012800 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006436 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P SE # loop_