HEADER LYASE 05-APR-07 2PFM TITLE CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE (PURB) FROM BACILLUS TITLE 2 ANTHRACIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLOSUCCINATE LYASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.3.2.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: PURB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-YSBLIC KEYWDS ADENYLOSUCCINATE LYASE, PURB, PURINE BIOSYNTHESIS, BA0290, BACILLUS KEYWDS 2 ANTHRACIS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR V.M.LEVDIKOV,E.V.BLAGOVA,M.BAUMGART,O.V.MOROZ,A.J.WILKINSON, AUTHOR 2 K.S.WILSON REVDAT 4 30-AUG-23 2PFM 1 REMARK REVDAT 3 13-JUL-11 2PFM 1 VERSN REVDAT 2 24-FEB-09 2PFM 1 VERSN REVDAT 1 17-APR-07 2PFM 0 JRNL AUTH V.M.LEVDIKOV,E.V.BLAGOVA,A.J.WILKINSON,K.S.WILSON JRNL TITL CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE (PURB) FROM JRNL TITL 2 BACILLUS ANTHRACIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 73838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3909 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2641 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 167 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7004 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 508 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46000 REMARK 3 B22 (A**2) : 0.46000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.23000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.376 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.026 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7172 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4900 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9688 ; 1.560 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11925 ; 1.080 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 870 ; 6.551 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 349 ;37.868 ;24.040 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1320 ;17.957 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;16.883 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1071 ; 0.210 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7929 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1443 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1811 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5304 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3539 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3612 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 428 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.074 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 67 ; 0.334 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 176 ; 0.281 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 41 ; 0.273 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5644 ; 1.217 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1757 ; 0.293 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7000 ; 1.440 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3297 ; 2.533 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2687 ; 3.676 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 14920 ; 1.391 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 515 ; 6.644 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 11937 ; 1.777 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PFM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00040 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78074 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 42.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.75300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1C3C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE, PH 6.9, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.32967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.65933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.49450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 145.82417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.16483 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.32967 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.65933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 145.82417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 87.49450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.16483 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 35160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 52010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -106.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 -77.19050 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -133.69787 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -29.16483 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 918 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 452 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY B -8 REMARK 465 SER B -7 REMARK 465 SER B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 82 -18.53 117.47 REMARK 500 ALA A 147 -84.62 -113.10 REMARK 500 THR A 213 -141.03 -101.82 REMARK 500 ARG A 251 58.32 39.11 REMARK 500 HIS A 301 -123.43 54.83 REMARK 500 ARG A 303 152.78 148.99 REMARK 500 SER B 3 -28.80 -150.40 REMARK 500 ALA B 147 -91.01 -113.34 REMARK 500 THR B 213 -127.42 -103.87 REMARK 500 HIS B 301 -127.34 50.36 REMARK 500 ARG B 303 151.91 149.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE B 2 SER B 3 -70.44 REMARK 500 SER B 3 ARG B 4 147.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 903 DBREF 2PFM A 1 435 UNP Q81ZH6 Q81ZH6_BACAN 1 435 DBREF 2PFM B 1 435 UNP Q81ZH6 Q81ZH6_BACAN 1 435 SEQADV 2PFM GLY A -8 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM SER A -7 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM SER A -6 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS A -5 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS A -4 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS A -3 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS A -2 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS A -1 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS A 0 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM GLY B -8 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM SER B -7 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM SER B -6 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS B -5 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS B -4 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS B -3 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS B -2 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS B -1 UNP Q81ZH6 CLONING ARTIFACT SEQADV 2PFM HIS B 0 UNP Q81ZH6 CLONING ARTIFACT SEQRES 1 A 444 GLY SER SER HIS HIS HIS HIS HIS HIS MET ILE SER ARG SEQRES 2 A 444 TYR THR ARG PRO GLU MET GLY ALA ILE TRP THR GLU GLU SEQRES 3 A 444 ASN LYS PHE LYS ALA TRP LEU GLU VAL GLU ILE LEU ALA SEQRES 4 A 444 CYS GLU ALA TRP ALA GLU LEU GLY ASP ILE PRO LYS GLU SEQRES 5 A 444 ASP VAL LYS LYS ILE ARG GLU HIS ALA SER PHE ASP ILE SEQRES 6 A 444 ASP ARG ILE TYR GLU ILE GLU LYS GLU THR ARG HIS ASP SEQRES 7 A 444 VAL VAL ALA PHE THR ARG ALA VAL SER GLU THR PRO ALA SEQRES 8 A 444 LEU GLY GLU GLU ARG LYS TRP VAL HIS TYR GLY LEU THR SEQRES 9 A 444 SER THR ASP VAL VAL ASP THR ALA LEU SER TYR ILE LEU SEQRES 10 A 444 LYS GLN ALA ASN GLU ILE ILE LEU LYS ASP LEU GLU ASN SEQRES 11 A 444 PHE VAL SER ILE LEU ALA ASN LYS ALA LYS GLU HIS LYS SEQRES 12 A 444 TYR THR ILE MET MET GLY ARG THR HIS GLY VAL HIS ALA SEQRES 13 A 444 GLU PRO THR THR PHE GLY LEU LYS LEU GLY LEU TRP TYR SEQRES 14 A 444 GLU GLU MET LYS ARG ASN VAL GLU ARG PHE LYS GLN ALA SEQRES 15 A 444 ALA ASN THR VAL ARG VAL GLY LYS LEU SER GLY ALA VAL SEQRES 16 A 444 GLY THR TYR ALA ASN ILE ASP PRO PHE VAL GLU LYS TYR SEQRES 17 A 444 VAL CYS GLU ASN LEU GLY LEU GLU ALA ALA PRO ILE SER SEQRES 18 A 444 THR GLN THR LEU GLN ARG ASP ARG HIS ALA HIS TYR MET SEQRES 19 A 444 SER THR LEU ALA LEU ILE ALA THR SER ILE GLU LYS MET SEQRES 20 A 444 ALA VAL GLU ILE ARG GLY LEU GLN LYS SER GLU THR ARG SEQRES 21 A 444 GLU VAL GLU GLU ALA PHE ALA LYS GLY GLN LYS GLY SER SEQRES 22 A 444 SER ALA MET PRO HIS LYS ARG ASN PRO ILE GLY SER GLU SEQRES 23 A 444 ASN MET THR GLY LEU ALA ARG VAL ILE ARG GLY TYR MET SEQRES 24 A 444 MET THR ALA TYR GLU ASN VAL PRO LEU TRP HIS GLU ARG SEQRES 25 A 444 ASP ILE SER HIS SER SER ALA GLU ARG VAL ILE LEU PRO SEQRES 26 A 444 ASP ALA THR ILE ALA LEU ASN TYR MET LEU ASN ARG PHE SEQRES 27 A 444 GLY ASN ILE VAL LYS ASN LEU THR VAL TYR PRO GLU ASN SEQRES 28 A 444 MET LYS ARG ASN MET THR ARG THR TYR GLY LEU ILE TYR SEQRES 29 A 444 SER GLN ARG VAL MET LEU THR LEU ILE ASP LYS GLY MET SEQRES 30 A 444 VAL ARG GLU GLU ALA TYR ASP ILE VAL GLN PRO LYS ALA SEQRES 31 A 444 MET GLU ALA TRP GLU THR GLN VAL GLN PHE LYS GLU LEU SEQRES 32 A 444 VAL GLU ALA ASP GLU ARG ILE THR SER LYS LEU THR GLN SEQRES 33 A 444 GLU GLU ILE ASN GLU CYS PHE ASN TYR GLU HIS HIS MET SEQRES 34 A 444 GLN HIS VAL ASP THR ILE PHE GLU ARG LEU GLY LEU ASN SEQRES 35 A 444 GLU ALA SEQRES 1 B 444 GLY SER SER HIS HIS HIS HIS HIS HIS MET ILE SER ARG SEQRES 2 B 444 TYR THR ARG PRO GLU MET GLY ALA ILE TRP THR GLU GLU SEQRES 3 B 444 ASN LYS PHE LYS ALA TRP LEU GLU VAL GLU ILE LEU ALA SEQRES 4 B 444 CYS GLU ALA TRP ALA GLU LEU GLY ASP ILE PRO LYS GLU SEQRES 5 B 444 ASP VAL LYS LYS ILE ARG GLU HIS ALA SER PHE ASP ILE SEQRES 6 B 444 ASP ARG ILE TYR GLU ILE GLU LYS GLU THR ARG HIS ASP SEQRES 7 B 444 VAL VAL ALA PHE THR ARG ALA VAL SER GLU THR PRO ALA SEQRES 8 B 444 LEU GLY GLU GLU ARG LYS TRP VAL HIS TYR GLY LEU THR SEQRES 9 B 444 SER THR ASP VAL VAL ASP THR ALA LEU SER TYR ILE LEU SEQRES 10 B 444 LYS GLN ALA ASN GLU ILE ILE LEU LYS ASP LEU GLU ASN SEQRES 11 B 444 PHE VAL SER ILE LEU ALA ASN LYS ALA LYS GLU HIS LYS SEQRES 12 B 444 TYR THR ILE MET MET GLY ARG THR HIS GLY VAL HIS ALA SEQRES 13 B 444 GLU PRO THR THR PHE GLY LEU LYS LEU GLY LEU TRP TYR SEQRES 14 B 444 GLU GLU MET LYS ARG ASN VAL GLU ARG PHE LYS GLN ALA SEQRES 15 B 444 ALA ASN THR VAL ARG VAL GLY LYS LEU SER GLY ALA VAL SEQRES 16 B 444 GLY THR TYR ALA ASN ILE ASP PRO PHE VAL GLU LYS TYR SEQRES 17 B 444 VAL CYS GLU ASN LEU GLY LEU GLU ALA ALA PRO ILE SER SEQRES 18 B 444 THR GLN THR LEU GLN ARG ASP ARG HIS ALA HIS TYR MET SEQRES 19 B 444 SER THR LEU ALA LEU ILE ALA THR SER ILE GLU LYS MET SEQRES 20 B 444 ALA VAL GLU ILE ARG GLY LEU GLN LYS SER GLU THR ARG SEQRES 21 B 444 GLU VAL GLU GLU ALA PHE ALA LYS GLY GLN LYS GLY SER SEQRES 22 B 444 SER ALA MET PRO HIS LYS ARG ASN PRO ILE GLY SER GLU SEQRES 23 B 444 ASN MET THR GLY LEU ALA ARG VAL ILE ARG GLY TYR MET SEQRES 24 B 444 MET THR ALA TYR GLU ASN VAL PRO LEU TRP HIS GLU ARG SEQRES 25 B 444 ASP ILE SER HIS SER SER ALA GLU ARG VAL ILE LEU PRO SEQRES 26 B 444 ASP ALA THR ILE ALA LEU ASN TYR MET LEU ASN ARG PHE SEQRES 27 B 444 GLY ASN ILE VAL LYS ASN LEU THR VAL TYR PRO GLU ASN SEQRES 28 B 444 MET LYS ARG ASN MET THR ARG THR TYR GLY LEU ILE TYR SEQRES 29 B 444 SER GLN ARG VAL MET LEU THR LEU ILE ASP LYS GLY MET SEQRES 30 B 444 VAL ARG GLU GLU ALA TYR ASP ILE VAL GLN PRO LYS ALA SEQRES 31 B 444 MET GLU ALA TRP GLU THR GLN VAL GLN PHE LYS GLU LEU SEQRES 32 B 444 VAL GLU ALA ASP GLU ARG ILE THR SER LYS LEU THR GLN SEQRES 33 B 444 GLU GLU ILE ASN GLU CYS PHE ASN TYR GLU HIS HIS MET SEQRES 34 B 444 GLN HIS VAL ASP THR ILE PHE GLU ARG LEU GLY LEU ASN SEQRES 35 B 444 GLU ALA HET MLI A 901 7 HET MLI A 902 7 HET MLI A 903 7 HETNAM MLI MALONATE ION FORMUL 3 MLI 3(C3 H2 O4 2-) FORMUL 6 HOH *508(H2 O) HELIX 1 1 ARG A 7 TRP A 14 1 8 HELIX 2 2 THR A 15 LEU A 37 1 23 HELIX 3 3 PRO A 41 ALA A 52 1 12 HELIX 4 4 ASP A 55 ARG A 67 1 13 HELIX 5 5 HIS A 68 GLU A 79 1 12 HELIX 6 6 GLY A 84 VAL A 90 5 7 HELIX 7 7 THR A 95 HIS A 133 1 39 HELIX 8 8 PHE A 152 VAL A 177 1 26 HELIX 9 9 ASP A 193 LEU A 204 1 12 HELIX 10 10 ARG A 218 GLN A 246 1 29 HELIX 11 11 PRO A 273 ASN A 296 1 24 HELIX 12 12 ILE A 305 ASN A 335 1 31 HELIX 13 13 TYR A 339 THR A 348 1 10 HELIX 14 14 GLY A 352 ILE A 354 5 3 HELIX 15 15 TYR A 355 LYS A 366 1 12 HELIX 16 16 VAL A 369 GLN A 388 1 20 HELIX 17 17 GLN A 390 ALA A 397 1 8 HELIX 18 18 ASP A 398 SER A 403 1 6 HELIX 19 19 THR A 406 PHE A 414 1 9 HELIX 20 20 ASN A 415 GLN A 421 5 7 HELIX 21 21 HIS A 422 GLY A 431 1 10 HELIX 22 22 ARG B 7 TRP B 14 1 8 HELIX 23 23 THR B 15 GLY B 38 1 24 HELIX 24 24 PRO B 41 ALA B 52 1 12 HELIX 25 25 ASP B 55 ARG B 67 1 13 HELIX 26 26 HIS B 68 GLU B 79 1 12 HELIX 27 27 GLY B 84 VAL B 90 5 7 HELIX 28 28 THR B 95 HIS B 133 1 39 HELIX 29 29 PHE B 152 VAL B 177 1 26 HELIX 30 30 ASP B 193 LEU B 204 1 12 HELIX 31 31 ARG B 218 GLN B 246 1 29 HELIX 32 32 PRO B 273 ASN B 296 1 24 HELIX 33 33 ILE B 305 ASN B 335 1 31 HELIX 34 34 TYR B 339 THR B 348 1 10 HELIX 35 35 GLY B 352 ILE B 354 5 3 HELIX 36 36 TYR B 355 LYS B 366 1 12 HELIX 37 37 VAL B 369 GLN B 388 1 20 HELIX 38 38 GLN B 390 ALA B 397 1 8 HELIX 39 39 ASP B 398 SER B 403 1 6 HELIX 40 40 THR B 406 PHE B 414 1 9 HELIX 41 41 ASN B 415 GLN B 421 5 7 HELIX 42 42 HIS B 422 GLY B 431 1 10 SHEET 1 A 2 ILE A 137 THR A 142 0 SHEET 2 A 2 VAL A 145 THR A 151 -1 O THR A 150 N MET A 138 SHEET 1 B 2 VAL A 179 GLY A 180 0 SHEET 2 B 2 GLU A 207 ALA A 208 1 O GLU A 207 N GLY A 180 SHEET 1 C 2 VAL A 253 GLU A 254 0 SHEET 2 C 2 THR A 337 VAL A 338 -1 O THR A 337 N GLU A 254 SHEET 1 D 2 ILE B 137 THR B 142 0 SHEET 2 D 2 VAL B 145 THR B 151 -1 O THR B 150 N MET B 138 SHEET 1 E 2 VAL B 179 GLY B 180 0 SHEET 2 E 2 GLU B 207 ALA B 208 1 O GLU B 207 N GLY B 180 SHEET 1 F 2 VAL B 253 GLU B 254 0 SHEET 2 F 2 THR B 337 VAL B 338 -1 O THR B 337 N GLU B 254 CISPEP 1 ILE A 2 SER A 3 0 19.95 SITE 1 AC1 11 THR A 142 HIS A 143 HIS B 68 SER B 96 SITE 2 AC1 11 GLN B 214 GLY B 263 SER B 264 MET B 267 SITE 3 AC1 11 LYS B 270 ASN B 272 HOH B 649 SITE 1 AC2 10 HIS A 68 SER A 96 GLN A 214 GLY A 263 SITE 2 AC2 10 SER A 264 MET A 267 LYS A 270 ASN A 272 SITE 3 AC2 10 THR B 142 HIS B 143 SITE 1 AC3 6 GLN A 110 HOH A 951 HOH A 991 HOH A1090 SITE 2 AC3 6 HOH B 616 HOH B 634 CRYST1 154.381 154.381 174.989 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006477 0.003740 0.000000 0.00000 SCALE2 0.000000 0.007480 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005715 0.00000