HEADER OXYGEN TRANSPORT 16-SEP-94 2PGH TITLE STRUCTURE DETERMINATION OF AQUOMET PORCINE HEMOGLOBIN AT 2.8 ANGSTROM TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOGLOBIN (AQUO MET) (ALPHA CHAIN); COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMOGLOBIN (AQUO MET) (BETA CHAIN); COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: BLOOD; SOURCE 6 TISSUE: BLOOD; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 9 ORGANISM_COMMON: PIG; SOURCE 10 ORGANISM_TAXID: 9823; SOURCE 11 ORGAN: BLOOD; SOURCE 12 TISSUE: BLOOD KEYWDS OXYGEN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR D.S.KATZ,S.P.WHITE,W.HUANG,R.KUMAR,D.W.CHRISTIANSON REVDAT 5 21-FEB-24 2PGH 1 REMARK SEQADV LINK REVDAT 4 24-FEB-09 2PGH 1 VERSN REVDAT 3 01-APR-03 2PGH 1 JRNL REVDAT 2 15-JAN-95 2PGH 1 JRNL REVDAT 1 30-NOV-94 2PGH 0 SPRSDE 30-NOV-94 2PGH 1PGH JRNL AUTH D.S.KATZ,S.P.WHITE,W.HUANG,R.KUMAR,D.W.CHRISTIANSON JRNL TITL STRUCTURE DETERMINATION OF AQUOMET PORCINE HEMOGLOBIN AT 2.8 JRNL TITL 2 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 244 541 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 7990139 JRNL DOI 10.1006/JMBI.1994.1751 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.K.O'DONNELL,M.J.MARTIN,J.S.LOGAN,R.KUMAR REMARK 1 TITL PRODUCTION OF HEMOGLOBIN IN TRANSGENIC SWINE: AN APPROACH TO REMARK 1 TITL 2 A BLOOD SUBSTITUTE REMARK 1 REF CANCER DETECT.PREV. V. 17 307 1993 REMARK 1 REFN ISSN 0361-090X REMARK 1 REFERENCE 2 REMARK 1 AUTH C.J.LEE,P.KAN,W.K.CHEN REMARK 1 TITL THE PURIFICATION AND COMPARATIVE ANALYSIS OF HEMOGLOBIN FROM REMARK 1 TITL 2 ANIMAL BLOODS REMARK 1 REF BIOMATER.,ARTIF.CELLS, V. 20 477 1992 REMARK 1 REF 2 IMMOBILIZATION BIOTECHNOL. REMARK 1 REFN ISSN 1055-7172 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.E.SWANSON,M.J.MARTIN,J.K.O'DONNELL,K.HOOVER,W.SAGO, REMARK 1 AUTH 2 V.HUNTRESS,C.T.PARSONS,C.A.PINKERT,S.PILDER,J.S.LOGAN REMARK 1 TITL PRODUCTION OF FUNCTIONAL HUMAN HEMOGLOBIN IN TRANSGENIC REMARK 1 TITL 2 SWINE REMARK 1 REF BIO/TECHNOLOGY V. 10 557 1992 REMARK 1 REFN ISSN 0733-222X REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 13290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4398 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 172 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178462. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.90000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.90000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -108.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE DEPOSITORS CONCLUDE THAT THEIR CRYSTALS ARE OF AQUOMET REMARK 400 FORM BECAUSE: REMARK 400 A) PRECAUTIONS SIMILAR TO THOSE USED IN THE CRYSTALLIZATION REMARK 400 OF HUMAN OXYHEMOGLOBIN (E.G., ADDITION OF CHELATING REMARK 400 AGENTS OR BUBBLING OXYGEN INTO SOLUTIONS) WERE NOT USED. REMARK 400 B) OXYHEMOGLOBIN AUTOOXIDIZES TO AQUOMET HEMOGLOBIN WITHOUT REMARK 400 SUCH PRECAUTIONS. REMARK 400 C) RE-DISSOLVED CRYSTALS EXHIBIT AN ABSORBANCE SPECTRUM REMARK 400 CHARACTERISTIC OF THE AQUOMET FORM (MAXIMUM = 405 NM). REMARK 400 HOWEVER, SOLVENT MOLECULES THAT COORDINATE TO EACH FE ATOM REMARK 400 ARE NOT APPARENT. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 50 CG HIS A 50 CD2 0.082 REMARK 500 HIS B 2 CG HIS B 2 CD2 0.064 REMARK 500 HIS B 120 CG HIS B 120 CD2 0.079 REMARK 500 HIS C 50 CG HIS C 50 CD2 0.059 REMARK 500 HIS C 58 CG HIS C 58 CD2 0.065 REMARK 500 HIS C 72 CG HIS C 72 CD2 0.079 REMARK 500 HIS C 113 CG HIS C 113 CD2 0.080 REMARK 500 HIS D 2 CG HIS D 2 CD2 0.061 REMARK 500 HIS D 97 CG HIS D 97 CD2 0.057 REMARK 500 HIS D 120 CG HIS D 120 CD2 0.057 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 24 CA - CB - CG ANGL. DEV. = 12.9 DEGREES REMARK 500 HIS A 58 CA - CB - CG ANGL. DEV. = -15.7 DEGREES REMARK 500 HIS A 89 CB - CG - CD2 ANGL. DEV. = -13.5 DEGREES REMARK 500 PRO A 95 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 HIS A 103 CG - CD2 - NE2 ANGL. DEV. = -7.3 DEGREES REMARK 500 HIS A 113 CA - CB - CG ANGL. DEV. = 20.9 DEGREES REMARK 500 LEU A 136 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 HIS B 2 CG - CD2 - NE2 ANGL. DEV. = -7.2 DEGREES REMARK 500 HIS B 63 CG - CD2 - NE2 ANGL. DEV. = -8.0 DEGREES REMARK 500 HIS B 77 CA - CB - CG ANGL. DEV. = 12.3 DEGREES REMARK 500 HIS B 143 CE1 - NE2 - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 HIS C 87 CB - CG - CD2 ANGL. DEV. = -9.8 DEGREES REMARK 500 HIS C 87 CE1 - NE2 - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 HIS C 89 CA - CB - CG ANGL. DEV. = 12.1 DEGREES REMARK 500 HIS C 103 CB - CG - ND1 ANGL. DEV. = -8.2 DEGREES REMARK 500 HIS C 103 CG - CD2 - NE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 HIS C 112 CB - CG - CD2 ANGL. DEV. = -11.0 DEGREES REMARK 500 HIS C 112 CE1 - NE2 - CD2 ANGL. DEV. = 4.3 DEGREES REMARK 500 HIS C 112 CG - CD2 - NE2 ANGL. DEV. = -8.8 DEGREES REMARK 500 HIS C 113 CA - CB - CG ANGL. DEV. = 44.8 DEGREES REMARK 500 HIS C 122 CA - CB - CG ANGL. DEV. = 11.2 DEGREES REMARK 500 HIS D 2 CG - CD2 - NE2 ANGL. DEV. = -7.2 DEGREES REMARK 500 HIS D 77 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 HIS D 146 CA - CB - CG ANGL. DEV. = 13.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 38 -4.33 -55.65 REMARK 500 TYR A 42 2.17 -60.62 REMARK 500 LEU A 48 58.38 4.47 REMARK 500 ASP A 53 -41.96 -18.50 REMARK 500 HIS A 72 27.06 -140.34 REMARK 500 ALA A 79 28.86 -74.65 REMARK 500 LEU A 80 13.01 -156.63 REMARK 500 ALA A 82 -78.37 -48.32 REMARK 500 ALA A 88 41.79 -109.71 REMARK 500 HIS A 89 -67.49 -175.92 REMARK 500 PRO A 114 11.49 -56.93 REMARK 500 PHE A 117 63.70 -62.69 REMARK 500 THR A 137 57.78 -141.49 REMARK 500 SER A 138 -70.02 -125.39 REMARK 500 LYS A 139 -37.53 -26.62 REMARK 500 TYR A 140 -50.73 -12.79 REMARK 500 SER B 4 -150.08 -85.78 REMARK 500 LEU B 31 -70.82 -59.20 REMARK 500 TYR B 35 77.14 -100.92 REMARK 500 LEU B 48 21.82 -141.59 REMARK 500 LYS B 76 -35.42 73.07 REMARK 500 HIS B 77 32.25 -90.94 REMARK 500 ALA B 86 -78.24 -40.00 REMARK 500 ARG B 117 -76.22 -78.61 REMARK 500 HIS B 120 -28.06 -37.66 REMARK 500 HIS B 143 -75.46 -54.85 REMARK 500 LYS B 144 82.39 -68.54 REMARK 500 TYR B 145 -142.14 -134.31 REMARK 500 HIS C 50 116.93 176.34 REMARK 500 ASP C 53 -27.64 -38.93 REMARK 500 SER C 81 -73.60 17.36 REMARK 500 ALA C 88 -82.83 -64.74 REMARK 500 LYS C 90 -77.86 179.92 REMARK 500 ASP C 116 77.07 -113.69 REMARK 500 PHE C 117 52.08 -149.47 REMARK 500 LYS C 139 25.06 -70.15 REMARK 500 PHE D 41 -16.67 -46.80 REMARK 500 PHE D 42 -89.26 -102.03 REMARK 500 GLU D 43 -61.33 64.83 REMARK 500 PHE D 45 21.91 -58.28 REMARK 500 ASP D 47 106.40 -51.12 REMARK 500 SER D 49 31.03 -172.08 REMARK 500 ASN D 50 152.41 175.24 REMARK 500 HIS D 77 46.45 -142.97 REMARK 500 ASP D 94 -72.15 -70.86 REMARK 500 PRO D 100 -17.73 -47.11 REMARK 500 ASP D 121 5.17 -68.64 REMARK 500 ALA D 142 41.36 -91.42 REMARK 500 HIS D 143 -80.68 -98.34 REMARK 500 LYS D 144 66.89 -64.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 HIS A 50 0.10 SIDE CHAIN REMARK 500 HIS A 72 0.12 SIDE CHAIN REMARK 500 HIS A 87 0.10 SIDE CHAIN REMARK 500 HIS A 89 0.15 SIDE CHAIN REMARK 500 TYR B 35 0.08 SIDE CHAIN REMARK 500 HIS B 146 0.11 SIDE CHAIN REMARK 500 HIS C 58 0.13 SIDE CHAIN REMARK 500 HIS C 89 0.11 SIDE CHAIN REMARK 500 HIS C 103 0.14 SIDE CHAIN REMARK 500 HIS C 113 0.10 SIDE CHAIN REMARK 500 HIS D 63 0.11 SIDE CHAIN REMARK 500 HIS D 97 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 142 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 NE2 REMARK 620 2 HEM A 142 NA 88.6 REMARK 620 3 HEM A 142 NB 82.0 85.6 REMARK 620 4 HEM A 142 NC 88.4 175.2 90.3 REMARK 620 5 HEM A 142 ND 99.3 91.5 176.8 92.7 REMARK 620 6 HOH A 149 O 160.5 109.3 106.4 74.3 73.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 147 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 92 NE2 REMARK 620 2 HEM B 147 NA 88.3 REMARK 620 3 HEM B 147 NB 88.1 86.6 REMARK 620 4 HEM B 147 NC 82.7 170.5 89.8 REMARK 620 5 HEM B 147 ND 86.2 91.2 173.9 91.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 142 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 87 NE2 REMARK 620 2 HEM C 142 NA 104.0 REMARK 620 3 HEM C 142 NB 87.4 86.8 REMARK 620 4 HEM C 142 NC 84.2 171.3 96.5 REMARK 620 5 HEM C 142 ND 89.4 89.7 174.5 87.6 REMARK 620 6 HOH C 148 O 156.5 98.7 100.0 72.8 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 147 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 92 NE2 REMARK 620 2 HEM D 147 NA 87.0 REMARK 620 3 HEM D 147 NB 70.9 90.6 REMARK 620 4 HEM D 147 NC 91.6 177.8 90.6 REMARK 620 5 HEM D 147 ND 90.6 88.7 161.6 89.6 REMARK 620 6 HOH D 155 O 156.7 106.0 89.3 75.9 108.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 147 DBREF 2PGH A 1 141 UNP P01965 HBA_PIG 1 141 DBREF 2PGH B 1 146 UNP P02067 HBB_PIG 1 146 DBREF 2PGH C 1 141 UNP P01965 HBA_PIG 1 141 DBREF 2PGH D 1 146 UNP P02067 HBB_PIG 1 146 SEQADV 2PGH ASP B 125 UNP P02067 ASN 125 CONFLICT SEQADV 2PGH ASP D 125 UNP P02067 ASN 125 CONFLICT SEQRES 1 A 141 VAL LEU SER ALA ALA ASP LYS ALA ASN VAL LYS ALA ALA SEQRES 2 A 141 TRP GLY LYS VAL GLY GLY GLN ALA GLY ALA HIS GLY ALA SEQRES 3 A 141 GLU ALA LEU GLU ARG MET PHE LEU GLY PHE PRO THR THR SEQRES 4 A 141 LYS THR TYR PHE PRO HIS PHE ASN LEU SER HIS GLY SER SEQRES 5 A 141 ASP GLN VAL LYS ALA HIS GLY GLN LYS VAL ALA ASP ALA SEQRES 6 A 141 LEU THR LYS ALA VAL GLY HIS LEU ASP ASP LEU PRO GLY SEQRES 7 A 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU SEQRES 8 A 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS SEQRES 9 A 141 LEU LEU VAL THR LEU ALA ALA HIS HIS PRO ASP ASP PHE SEQRES 10 A 141 ASN PRO SER VAL HIS ALA SER LEU ASP LYS PHE LEU ALA SEQRES 11 A 141 ASN VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 B 146 VAL HIS LEU SER ALA GLU GLU LYS GLU ALA VAL LEU GLY SEQRES 2 B 146 LEU TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU SEQRES 3 B 146 ALA LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN SEQRES 4 B 146 ARG PHE PHE GLU SER PHE GLY ASP LEU SER ASN ALA ASP SEQRES 5 B 146 ALA VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS SEQRES 6 B 146 LYS VAL LEU GLN SER PHE SER ASP GLY LEU LYS HIS LEU SEQRES 7 B 146 ASP ASN LEU LYS GLY THR PHE ALA LYS LEU SER GLU LEU SEQRES 8 B 146 HIS CYS ASP GLN LEU HIS VAL ASP PRO GLU ASN PHE ARG SEQRES 9 B 146 LEU LEU GLY ASN VAL ILE VAL VAL VAL LEU ALA ARG ARG SEQRES 10 B 146 LEU GLY HIS ASP PHE ASN PRO ASP VAL GLN ALA ALA PHE SEQRES 11 B 146 GLN LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS SEQRES 12 B 146 LYS TYR HIS SEQRES 1 C 141 VAL LEU SER ALA ALA ASP LYS ALA ASN VAL LYS ALA ALA SEQRES 2 C 141 TRP GLY LYS VAL GLY GLY GLN ALA GLY ALA HIS GLY ALA SEQRES 3 C 141 GLU ALA LEU GLU ARG MET PHE LEU GLY PHE PRO THR THR SEQRES 4 C 141 LYS THR TYR PHE PRO HIS PHE ASN LEU SER HIS GLY SER SEQRES 5 C 141 ASP GLN VAL LYS ALA HIS GLY GLN LYS VAL ALA ASP ALA SEQRES 6 C 141 LEU THR LYS ALA VAL GLY HIS LEU ASP ASP LEU PRO GLY SEQRES 7 C 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU SEQRES 8 C 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS SEQRES 9 C 141 LEU LEU VAL THR LEU ALA ALA HIS HIS PRO ASP ASP PHE SEQRES 10 C 141 ASN PRO SER VAL HIS ALA SER LEU ASP LYS PHE LEU ALA SEQRES 11 C 141 ASN VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 D 146 VAL HIS LEU SER ALA GLU GLU LYS GLU ALA VAL LEU GLY SEQRES 2 D 146 LEU TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU SEQRES 3 D 146 ALA LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN SEQRES 4 D 146 ARG PHE PHE GLU SER PHE GLY ASP LEU SER ASN ALA ASP SEQRES 5 D 146 ALA VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS SEQRES 6 D 146 LYS VAL LEU GLN SER PHE SER ASP GLY LEU LYS HIS LEU SEQRES 7 D 146 ASP ASN LEU LYS GLY THR PHE ALA LYS LEU SER GLU LEU SEQRES 8 D 146 HIS CYS ASP GLN LEU HIS VAL ASP PRO GLU ASN PHE ARG SEQRES 9 D 146 LEU LEU GLY ASN VAL ILE VAL VAL VAL LEU ALA ARG ARG SEQRES 10 D 146 LEU GLY HIS ASP PHE ASN PRO ASP VAL GLN ALA ALA PHE SEQRES 11 D 146 GLN LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS SEQRES 12 D 146 LYS TYR HIS HET HEM A 142 43 HET HEM B 147 43 HET HEM C 142 43 HET HEM D 147 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 9 HOH *130(H2 O) HELIX 1 AA SER A 3 GLY A 18 1 16 HELIX 2 AB GLN A 20 GLY A 35 1 16 HELIX 3 AC PHE A 36 TYR A 42 1 7 HELIX 4 AE SER A 52 GLY A 71 1 20 HELIX 5 AF LEU A 80 ALA A 88 1 9 HELIX 6 AG ASP A 94 HIS A 112 1 19 HELIX 7 AH ASN A 118 SER A 138 1 21 HELIX 8 BA SER B 4 VAL B 18 1 15 HELIX 9 BB ASN B 19 VAL B 34 1 16 HELIX 10 BC TYR B 35 PHE B 41 1 7 HELIX 11 BD ASN B 50 GLY B 56 1 7 HELIX 12 BE ASN B 57 LYS B 76 1 20 HELIX 13 BF PHE B 85 CYS B 93 1 9 HELIX 14 BG ASP B 99 ARG B 117 1 19 HELIX 15 BH ASN B 123 HIS B 143 1 21 HELIX 16 CA SER C 3 GLY C 18 1 16 HELIX 17 CB GLN C 20 GLY C 35 1 16 HELIX 18 CC PHE C 36 TYR C 42 1 7 HELIX 19 CE SER C 52 GLY C 71 1 20 HELIX 20 CF LEU C 80 ALA C 88 1 9 HELIX 21 CG ASP C 94 HIS C 112 1 19 HELIX 22 CH ASN C 118 SER C 138 1 21 HELIX 23 DA SER D 4 VAL D 18 1 15 HELIX 24 DB ASN D 19 VAL D 34 1 16 HELIX 25 DC TYR D 35 PHE D 41 1 7 HELIX 26 DD ASN D 50 GLY D 56 1 7 HELIX 27 DE ASN D 57 LYS D 76 1 20 HELIX 28 DF PHE D 85 CYS D 93 1 9 HELIX 29 DG ASP D 99 ARG D 117 1 19 HELIX 30 DH ASN D 123 HIS D 143 1 21 LINK NE2 HIS A 87 FE HEM A 142 1555 1555 2.72 LINK FE HEM A 142 O HOH A 149 1555 1555 2.81 LINK NE2 HIS B 92 FE HEM B 147 1555 1555 2.99 LINK NE2 HIS C 87 FE HEM C 142 1555 1555 2.79 LINK FE HEM C 142 O HOH C 148 1555 1555 2.85 LINK NE2 HIS D 92 FE HEM D 147 1555 1555 2.88 LINK FE HEM D 147 O HOH D 155 1555 1555 2.99 SITE 1 AC1 15 MET A 32 TYR A 42 PHE A 43 HIS A 45 SITE 2 AC1 15 ALA A 65 LEU A 83 HIS A 87 LEU A 91 SITE 3 AC1 15 VAL A 93 ASN A 97 PHE A 98 LEU A 101 SITE 4 AC1 15 LEU A 136 HOH A 149 ALA C 12 SITE 1 AC2 14 THR B 38 PHE B 41 PHE B 42 HIS B 63 SITE 2 AC2 14 SER B 70 LEU B 91 HIS B 92 LEU B 96 SITE 3 AC2 14 ASN B 102 PHE B 103 LEU B 106 LEU B 141 SITE 4 AC2 14 HIS C 50 HIS D 120 SITE 1 AC3 12 TYR C 42 PHE C 43 HIS C 58 LYS C 61 SITE 2 AC3 12 ALA C 65 HIS C 87 ASN C 97 LEU C 101 SITE 3 AC3 12 HOH C 148 HOH C 152 HOH C 159 HOH C 177 SITE 1 AC4 15 PHE D 41 PHE D 42 PHE D 45 HIS D 63 SITE 2 AC4 15 SER D 70 LEU D 91 HIS D 92 LEU D 96 SITE 3 AC4 15 ASN D 102 PHE D 103 LEU D 106 LEU D 141 SITE 4 AC4 15 HOH D 153 HOH D 155 HOH D 173 CRYST1 69.600 72.800 115.800 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014368 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008636 0.00000