HEADER TRANSFERASE 24-APR-07 2PN7 TITLE HUMAN GAMMA-GLUTAMYL CYCLOTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN GAMMA-GLUTAMYL CYCLOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.2.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C7ORF24; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHUE KEYWDS BETA BARREL, DIMER, HUMAN GAMMA-GLUTAMYL CYCLOTRANSFERASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.J.OAKLEY,P.G.BOARD REVDAT 5 21-FEB-24 2PN7 1 REMARK REVDAT 4 13-JUL-11 2PN7 1 VERSN REVDAT 3 12-MAY-09 2PN7 1 JRNL REVDAT 2 24-FEB-09 2PN7 1 VERSN REVDAT 1 01-MAY-07 2PN7 0 JRNL AUTH A.J.OAKLEY,T.YAMADA,D.LIU,M.COGGAN,A.G.CLARK,P.G.BOARD JRNL TITL THE IDENTIFICATION AND STRUCTURAL CHARACTERIZATION OF JRNL TITL 2 C7ORF24 AS GAMMA-GLUTAMYL CYCLOTRANSFERASE. AN ESSENTIAL JRNL TITL 3 ENZYME IN THE GAMMA-GLUTAMYL CYCLE. JRNL REF J.BIOL.CHEM. V. 283 22031 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18515354 JRNL DOI 10.1074/JBC.M803623200 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : -1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 13023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 687 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 733 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2681 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 40.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.99000 REMARK 3 B22 (A**2) : 1.24000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.531 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.284 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.209 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.967 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2748 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3708 ; 1.506 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 338 ; 6.605 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;37.747 ;25.591 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 499 ;17.015 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.356 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 394 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2074 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1168 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1872 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 103 ; 0.172 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.151 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.096 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1738 ; 2.043 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2710 ; 3.356 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1172 ; 4.923 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 998 ; 7.015 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 182 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6030 87.0994 4.6345 REMARK 3 T TENSOR REMARK 3 T11: -0.1633 T22: -0.1759 REMARK 3 T33: -0.1512 T12: 0.0156 REMARK 3 T13: -0.0376 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 3.0672 L22: 3.9456 REMARK 3 L33: 5.9303 L12: -1.1182 REMARK 3 L13: 0.4631 L23: -0.6267 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: -0.1762 S13: -0.0922 REMARK 3 S21: 0.2151 S22: 0.0591 S23: 0.0866 REMARK 3 S31: 0.1816 S32: -0.1748 S33: 0.0191 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 182 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2784 111.0320 -12.5001 REMARK 3 T TENSOR REMARK 3 T11: -0.1213 T22: -0.1561 REMARK 3 T33: -0.1381 T12: 0.0408 REMARK 3 T13: 0.0374 T23: 0.0241 REMARK 3 L TENSOR REMARK 3 L11: 3.2519 L22: 4.0088 REMARK 3 L33: 3.2299 L12: -0.0350 REMARK 3 L13: 0.0379 L23: 0.0704 REMARK 3 S TENSOR REMARK 3 S11: 0.0601 S12: 0.0807 S13: 0.3373 REMARK 3 S21: -0.1112 S22: 0.0357 S23: -0.3054 REMARK 3 S31: -0.3809 S32: -0.0390 S33: -0.0958 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PN7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042564. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934, 0.97948 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI-111 REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : 19-ID BEAMLINE OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : 0.48600 REMARK 200 FOR THE DATA SET : 11.1400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.48600 REMARK 200 R SYM FOR SHELL (I) : 0.48600 REMARK 200 FOR SHELL : 2.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 MICRO L OF SELENOMETHIONINE REMARK 280 CONTAINING GGCT (15MG/ML IN 20 MM TRIS/HCL 0,1MM DITHIOTHREITOL REMARK 280 PH8.0) WAS MIXED WITH EQUAL VOLUMES OF GAMMA-GLU-GLU DIPEPTIDE REMARK 280 (40MM) AND WELL SOLUTION. THE WELL CONTAINED 1ML OF A SOLUTION REMARK 280 COMPRISING PEG 4000 (22.5% W/V), 100MM SODIUM FORMATE BUFFER REMARK 280 PH3.9, 200MM AMMONIUM ACETATE. , VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.59050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.32950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.33400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.32950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.59050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.33400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETIC UNIT CONTAINS A DIMER, WHICH IS THE REMARK 300 BIOLOGICAL ENTITY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 CYS A 6 REMARK 465 LYS A 7 REMARK 465 ASP A 8 REMARK 465 VAL A 9 REMARK 465 THR A 10 REMARK 465 GLY A 11 REMARK 465 PRO A 12 REMARK 465 ASP A 13 REMARK 465 GLY A 183 REMARK 465 GLU A 184 REMARK 465 THR A 185 REMARK 465 GLN A 186 REMARK 465 THR A 187 REMARK 465 LEU A 188 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASN B 3 REMARK 465 SER B 4 REMARK 465 GLY B 5 REMARK 465 CYS B 6 REMARK 465 LYS B 7 REMARK 465 ASP B 8 REMARK 465 VAL B 9 REMARK 465 THR B 10 REMARK 465 GLY B 11 REMARK 465 PRO B 12 REMARK 465 ASP B 13 REMARK 465 GLU B 14 REMARK 465 GLU B 184 REMARK 465 THR B 185 REMARK 465 GLN B 186 REMARK 465 THR B 187 REMARK 465 LEU B 188 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 33 CA - CB - CG ANGL. DEV. = 19.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 41 -63.70 -106.74 REMARK 500 SER A 74 101.03 -166.70 REMARK 500 LYS A 181 -46.84 -28.85 REMARK 500 GLN B 57 18.64 56.90 REMARK 500 ASP B 167 42.12 -96.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 14 GLU A 15 149.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 2PN7 A 1 188 UNP O75223 CG024_HUMAN 1 188 DBREF 2PN7 B 1 188 UNP O75223 CG024_HUMAN 1 188 SEQRES 1 A 188 MET ALA ASN SER GLY CYS LYS ASP VAL THR GLY PRO ASP SEQRES 2 A 188 GLU GLU SER PHE LEU TYR PHE ALA TYR GLY SER ASN LEU SEQRES 3 A 188 LEU THR GLU ARG ILE HIS LEU ARG ASN PRO SER ALA ALA SEQRES 4 A 188 PHE PHE CYS VAL ALA ARG LEU GLN ASP PHE LYS LEU ASP SEQRES 5 A 188 PHE GLY ASN SER GLN GLY LYS THR SER GLN THR TRP HIS SEQRES 6 A 188 GLY GLY ILE ALA THR ILE PHE GLN SER PRO GLY ASP GLU SEQRES 7 A 188 VAL TRP GLY VAL VAL TRP LYS MET ASN LYS SER ASN LEU SEQRES 8 A 188 ASN SER LEU ASP GLU GLN GLU GLY VAL LYS SER GLY MET SEQRES 9 A 188 TYR VAL VAL ILE GLU VAL LYS VAL ALA THR GLN GLU GLY SEQRES 10 A 188 LYS GLU ILE THR CYS ARG SER TYR LEU MET THR ASN TYR SEQRES 11 A 188 GLU SER ALA PRO PRO SER PRO GLN TYR LYS LYS ILE ILE SEQRES 12 A 188 CYS MET GLY ALA LYS GLU ASN GLY LEU PRO LEU GLU TYR SEQRES 13 A 188 GLN GLU LYS LEU LYS ALA ILE GLU PRO ASN ASP TYR THR SEQRES 14 A 188 GLY LYS VAL SER GLU GLU ILE GLU ASP ILE ILE LYS LYS SEQRES 15 A 188 GLY GLU THR GLN THR LEU SEQRES 1 B 188 MET ALA ASN SER GLY CYS LYS ASP VAL THR GLY PRO ASP SEQRES 2 B 188 GLU GLU SER PHE LEU TYR PHE ALA TYR GLY SER ASN LEU SEQRES 3 B 188 LEU THR GLU ARG ILE HIS LEU ARG ASN PRO SER ALA ALA SEQRES 4 B 188 PHE PHE CYS VAL ALA ARG LEU GLN ASP PHE LYS LEU ASP SEQRES 5 B 188 PHE GLY ASN SER GLN GLY LYS THR SER GLN THR TRP HIS SEQRES 6 B 188 GLY GLY ILE ALA THR ILE PHE GLN SER PRO GLY ASP GLU SEQRES 7 B 188 VAL TRP GLY VAL VAL TRP LYS MET ASN LYS SER ASN LEU SEQRES 8 B 188 ASN SER LEU ASP GLU GLN GLU GLY VAL LYS SER GLY MET SEQRES 9 B 188 TYR VAL VAL ILE GLU VAL LYS VAL ALA THR GLN GLU GLY SEQRES 10 B 188 LYS GLU ILE THR CYS ARG SER TYR LEU MET THR ASN TYR SEQRES 11 B 188 GLU SER ALA PRO PRO SER PRO GLN TYR LYS LYS ILE ILE SEQRES 12 B 188 CYS MET GLY ALA LYS GLU ASN GLY LEU PRO LEU GLU TYR SEQRES 13 B 188 GLN GLU LYS LEU LYS ALA ILE GLU PRO ASN ASP TYR THR SEQRES 14 B 188 GLY LYS VAL SER GLU GLU ILE GLU ASP ILE ILE LYS LYS SEQRES 15 B 188 GLY GLU THR GLN THR LEU FORMUL 3 HOH *34(H2 O) HELIX 1 1 GLY A 23 LEU A 26 5 4 HELIX 2 2 LEU A 27 ASN A 35 1 9 HELIX 3 3 ASN A 90 GLU A 98 1 9 HELIX 4 4 GLY A 99 GLY A 103 5 5 HELIX 5 5 SER A 136 ASN A 150 1 15 HELIX 6 6 PRO A 153 ALA A 162 1 10 HELIX 7 7 SER A 173 LYS A 182 1 10 HELIX 8 8 GLY B 23 LEU B 26 5 4 HELIX 9 9 LEU B 27 HIS B 32 1 6 HELIX 10 10 ASN B 90 GLU B 98 1 9 HELIX 11 11 SER B 136 ASN B 150 1 15 HELIX 12 12 PRO B 153 ALA B 162 1 10 HELIX 13 13 SER B 173 GLY B 183 1 11 SHEET 1 A 4 SER A 16 ALA A 21 0 SHEET 2 A 4 ILE A 68 ASN A 87 -1 O TRP A 84 N TYR A 19 SHEET 3 A 4 ALA A 39 SER A 56 -1 N CYS A 42 O VAL A 83 SHEET 4 A 4 TYR A 130 SER A 132 -1 O GLU A 131 N ASN A 55 SHEET 1 B 4 GLU A 119 LEU A 126 0 SHEET 2 B 4 VAL A 106 ALA A 113 -1 N VAL A 112 O ILE A 120 SHEET 3 B 4 VAL B 106 ALA B 113 -1 O VAL B 107 N GLU A 109 SHEET 4 B 4 GLU B 119 LEU B 126 -1 O ILE B 120 N VAL B 112 SHEET 1 C 4 SER B 16 ALA B 21 0 SHEET 2 C 4 ILE B 68 ASN B 87 -1 O TRP B 84 N TYR B 19 SHEET 3 C 4 ALA B 39 SER B 56 -1 N LEU B 46 O VAL B 79 SHEET 4 C 4 TYR B 130 SER B 132 -1 O GLU B 131 N ASN B 55 CRYST1 35.181 98.668 100.659 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028424 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010135 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009935 0.00000