HEADER TRANSPORT PROTEIN 24-APR-07 2PNN TITLE CRYSTAL STRUCTURE OF THE ANKYRIN REPEAT DOMAIN OF TRPV1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL SUBFAMILY V COMPND 3 MEMBER 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: ANKYRIN REPEAT DOMAIN; COMPND 6 SYNONYM: TRPV1, OSM-9-LIKE TRP CHANNEL 1, OTRPC1, VANILLOID RECEPTOR COMPND 7 1, VANILLOID RECEPTOR TYPE 1-LIKE, CAPSAICIN RECEPTOR; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: TRPV1, VR1, VR1L; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS TRPV1, ANKYRIN REPEAT DOMAIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.JIN,R.GAUDET REVDAT 4 30-OCT-24 2PNN 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2PNN 1 VERSN REVDAT 2 24-FEB-09 2PNN 1 VERSN REVDAT 1 03-JUL-07 2PNN 0 JRNL AUTH P.V.LISHKO,E.PROCKO,X.JIN,C.B.PHELPS,R.GAUDET JRNL TITL THE ANKYRIN REPEATS OF TRPV1 BIND MULTIPLE LIGANDS AND JRNL TITL 2 MODULATE CHANNEL SENSITIVITY. JRNL REF NEURON V. 54 905 2007 JRNL REFN ISSN 0896-6273 JRNL PMID 17582331 JRNL DOI 10.1016/J.NEURON.2007.05.027 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 9618 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 488 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 644 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1932 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 71 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.84000 REMARK 3 B22 (A**2) : 2.84000 REMARK 3 B33 (A**2) : -4.25000 REMARK 3 B12 (A**2) : 1.42000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.657 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.320 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.285 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.929 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1996 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2710 ; 1.718 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 247 ; 7.120 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;36.913 ;24.767 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 354 ;21.463 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.581 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 319 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1460 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1061 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1362 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 83 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.243 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.277 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1260 ; 0.391 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1985 ; 0.709 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 819 ; 1.095 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 725 ; 1.787 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0981 9.7581 -14.4728 REMARK 3 T TENSOR REMARK 3 T11: 0.4752 T22: 0.2421 REMARK 3 T33: 0.2829 T12: 0.2331 REMARK 3 T13: 0.0041 T23: 0.1459 REMARK 3 L TENSOR REMARK 3 L11: 3.4172 L22: 6.4183 REMARK 3 L33: 4.7196 L12: -3.9017 REMARK 3 L13: 0.7888 L23: -1.5942 REMARK 3 S TENSOR REMARK 3 S11: -0.0515 S12: 0.0498 S13: 0.4529 REMARK 3 S21: -0.0045 S22: 0.1551 S23: 0.5508 REMARK 3 S31: -1.1717 S32: -0.9588 S33: -0.1036 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 358 REMARK 3 ORIGIN FOR THE GROUP (A): 39.0221 -13.2057 -4.7594 REMARK 3 T TENSOR REMARK 3 T11: 0.0496 T22: 0.0709 REMARK 3 T33: 0.0458 T12: 0.0481 REMARK 3 T13: 0.0393 T23: 0.0674 REMARK 3 L TENSOR REMARK 3 L11: 3.6334 L22: 5.7446 REMARK 3 L33: 1.0153 L12: -2.1603 REMARK 3 L13: -0.7867 L23: 0.3384 REMARK 3 S TENSOR REMARK 3 S11: -0.1396 S12: 0.0011 S13: -0.1683 REMARK 3 S21: -0.0761 S22: 0.1599 S23: 0.2955 REMARK 3 S31: -0.0109 S32: -0.0657 S33: -0.0202 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PNN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000042577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13575 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.56000 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3% PEG 8000, 0.1M SODIUM CITRATE, 5MM REMARK 280 ATP, PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K, PH REMARK 280 5.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.73450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.71423 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.57633 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 49.73450 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 28.71423 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.57633 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 49.73450 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 28.71423 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.57633 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.42845 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 71.15267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.42845 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 71.15267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.42845 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 71.15267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 101 REMARK 465 VAL A 102 REMARK 465 SER A 103 REMARK 465 ALA A 104 REMARK 465 GLY A 105 REMARK 465 GLU A 106 REMARK 465 LYS A 107 REMARK 465 PRO A 108 REMARK 465 PRO A 109 REMARK 465 ARG A 110 REMARK 465 GLU A 359 REMARK 465 PRO A 360 REMARK 465 GLU A 361 REMARK 465 CYS A 362 REMARK 465 ARG A 363 REMARK 465 HIS A 364 REMARK 465 ALA A 365 REMARK 465 ALA A 366 REMARK 465 ALA A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 465 HIS A 372 REMARK 465 HIS A 373 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 128 -9.35 -56.94 REMARK 500 LYS A 140 26.69 49.24 REMARK 500 PRO A 151 -0.70 -59.38 REMARK 500 ASN A 170 124.11 -171.04 REMARK 500 LYS A 200 130.22 -37.43 REMARK 500 THR A 239 137.20 -39.06 REMARK 500 ARG A 242 -18.66 -149.24 REMARK 500 PHE A 247 39.98 -147.46 REMARK 500 GLU A 249 -56.67 76.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 240 GLY A 241 49.33 REMARK 500 ARG A 242 PRO A 243 -54.97 REMARK 500 PRO A 243 GLY A 244 73.55 REMARK 500 GLY A 244 PHE A 245 55.40 REMARK 500 PHE A 247 GLY A 248 -100.04 REMARK 500 GLY A 248 GLU A 249 130.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 374 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2NYJ RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN A DIFFERENT CRYSTAL FORM. DBREF 2PNN A 101 364 UNP O35433 TRPV1_RAT 101 364 SEQADV 2PNN MSE A 162 UNP O35433 MET 162 MODIFIED RESIDUE SEQADV 2PNN MSE A 214 UNP O35433 MET 214 MODIFIED RESIDUE SEQADV 2PNN MSE A 308 UNP O35433 MET 308 MODIFIED RESIDUE SEQADV 2PNN ALA A 365 UNP O35433 CLONING ARTIFACT SEQADV 2PNN ALA A 366 UNP O35433 CLONING ARTIFACT SEQADV 2PNN ALA A 367 UNP O35433 CLONING ARTIFACT SEQADV 2PNN HIS A 368 UNP O35433 CLONING ARTIFACT SEQADV 2PNN HIS A 369 UNP O35433 CLONING ARTIFACT SEQADV 2PNN HIS A 370 UNP O35433 CLONING ARTIFACT SEQADV 2PNN HIS A 371 UNP O35433 CLONING ARTIFACT SEQADV 2PNN HIS A 372 UNP O35433 CLONING ARTIFACT SEQADV 2PNN HIS A 373 UNP O35433 CLONING ARTIFACT SEQRES 1 A 273 SER VAL SER ALA GLY GLU LYS PRO PRO ARG LEU TYR ASP SEQRES 2 A 273 ARG ARG SER ILE PHE ASP ALA VAL ALA GLN SER ASN CYS SEQRES 3 A 273 GLN GLU LEU GLU SER LEU LEU PRO PHE LEU GLN ARG SER SEQRES 4 A 273 LYS LYS ARG LEU THR ASP SER GLU PHE LYS ASP PRO GLU SEQRES 5 A 273 THR GLY LYS THR CYS LEU LEU LYS ALA MSE LEU ASN LEU SEQRES 6 A 273 HIS ASN GLY GLN ASN ASP THR ILE ALA LEU LEU LEU ASP SEQRES 7 A 273 VAL ALA ARG LYS THR ASP SER LEU LYS GLN PHE VAL ASN SEQRES 8 A 273 ALA SER TYR THR ASP SER TYR TYR LYS GLY GLN THR ALA SEQRES 9 A 273 LEU HIS ILE ALA ILE GLU ARG ARG ASN MSE THR LEU VAL SEQRES 10 A 273 THR LEU LEU VAL GLU ASN GLY ALA ASP VAL GLN ALA ALA SEQRES 11 A 273 ALA ASN GLY ASP PHE PHE LYS LYS THR LYS GLY ARG PRO SEQRES 12 A 273 GLY PHE TYR PHE GLY GLU LEU PRO LEU SER LEU ALA ALA SEQRES 13 A 273 CYS THR ASN GLN LEU ALA ILE VAL LYS PHE LEU LEU GLN SEQRES 14 A 273 ASN SER TRP GLN PRO ALA ASP ILE SER ALA ARG ASP SER SEQRES 15 A 273 VAL GLY ASN THR VAL LEU HIS ALA LEU VAL GLU VAL ALA SEQRES 16 A 273 ASP ASN THR VAL ASP ASN THR LYS PHE VAL THR SER MSE SEQRES 17 A 273 TYR ASN GLU ILE LEU ILE LEU GLY ALA LYS LEU HIS PRO SEQRES 18 A 273 THR LEU LYS LEU GLU GLU ILE THR ASN ARG LYS GLY LEU SEQRES 19 A 273 THR PRO LEU ALA LEU ALA ALA SER SER GLY LYS ILE GLY SEQRES 20 A 273 VAL LEU ALA TYR ILE LEU GLN ARG GLU ILE HIS GLU PRO SEQRES 21 A 273 GLU CYS ARG HIS ALA ALA ALA HIS HIS HIS HIS HIS HIS MODRES 2PNN MSE A 162 MET SELENOMETHIONINE MODRES 2PNN MSE A 214 MET SELENOMETHIONINE MODRES 2PNN MSE A 308 MET SELENOMETHIONINE HET MSE A 162 8 HET MSE A 214 8 HET MSE A 308 8 HET ATP A 374 31 HETNAM MSE SELENOMETHIONINE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 HOH *71(H2 O) HELIX 1 1 ASP A 113 GLN A 123 1 11 HELIX 2 2 SER A 131 SER A 139 1 9 HELIX 3 3 ASP A 145 LYS A 149 5 5 HELIX 4 4 THR A 156 ASN A 164 1 9 HELIX 5 5 ASN A 170 THR A 183 1 14 HELIX 6 6 SER A 185 ASN A 191 1 7 HELIX 7 7 THR A 203 ARG A 211 1 9 HELIX 8 8 ASN A 213 ASN A 223 1 11 HELIX 9 9 GLY A 233 LYS A 237 5 5 HELIX 10 10 LEU A 250 THR A 258 1 9 HELIX 11 11 GLN A 260 ASN A 270 1 11 HELIX 12 12 THR A 286 ALA A 295 1 10 HELIX 13 13 THR A 298 HIS A 320 1 23 HELIX 14 14 LYS A 324 ILE A 328 5 5 HELIX 15 15 THR A 335 SER A 343 1 9 HELIX 16 16 LYS A 345 ILE A 357 1 13 LINK C ALA A 161 N MSE A 162 1555 1555 1.33 LINK C MSE A 162 N LEU A 163 1555 1555 1.33 LINK C ASN A 213 N MSE A 214 1555 1555 1.33 LINK C MSE A 214 N THR A 215 1555 1555 1.33 LINK C SER A 307 N MSE A 308 1555 1555 1.32 LINK C MSE A 308 N TYR A 309 1555 1555 1.32 SITE 1 AC1 13 HOH A 46 HOH A 71 ARG A 115 LYS A 155 SITE 2 AC1 13 LYS A 160 LEU A 163 ASN A 164 TYR A 199 SITE 3 AC1 13 GLN A 202 GLU A 210 ARG A 211 GLN A 269 SITE 4 AC1 13 LYS A 318 CRYST1 99.469 99.469 106.729 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010053 0.005804 0.000000 0.00000 SCALE2 0.000000 0.011609 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009370 0.00000