data_2PRT # _entry.id 2PRT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PRT pdb_00002prt 10.2210/pdb2prt/pdb NDB PD1019 ? ? RCSB RCSB042711 ? ? WWPDB D_1000042711 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PRT _pdbx_database_status.recvd_initial_deposition_date 2007-05-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stoll, R.' 1 'Lee, B.M.' 2 'Debler, E.W.' 3 'Laity, J.H.' 4 'Wilson, I.A.' 5 'Dyson, H.J.' 6 'Wright, P.E.' 7 # _citation.id primary _citation.title 'Structure of the Wilms tumor suppressor protein zinc finger domain bound to DNA' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 372 _citation.page_first 1227 _citation.page_last 1245 _citation.year 2007 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17716689 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2007.07.017 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stoll, R.' 1 ? primary 'Lee, B.M.' 2 ? primary 'Debler, E.W.' 3 ? primary 'Laity, J.H.' 4 ? primary 'Wilson, I.A.' 5 ? primary 'Dyson, H.J.' 6 ? primary 'Wright, P.E.' 7 ? # _cell.entry_id 2PRT _cell.length_a 86.879 _cell.length_b 86.879 _cell.length_c 171.202 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PRT _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*CP*GP*GP*GP*GP*GP*CP*GP*TP*CP*TP*G)-3') ; 4353.801 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*AP*GP*AP*CP*GP*CP*CP*CP*CP*CP*GP*CP*G)-3') ; 4211.734 1 ? ? ? ? 3 polymer man 'Wilms tumor 1' 14488.708 1 ? ? 'residues 174-291' ? 4 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DG)(DG)(DG)(DG)(DG)(DC)(DG)(DT)(DC)(DT)(DG)' CGCGGGGGCGTCTG B ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DA)(DC)(DG)(DC)(DC)(DC)(DC)(DC)(DG)(DC)(DG)' CAGACGCCCCCGCG C ? 3 'polypeptide(L)' no no ;ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH ; ;ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DG n 1 6 DG n 1 7 DG n 1 8 DG n 1 9 DC n 1 10 DG n 1 11 DT n 1 12 DC n 1 13 DT n 1 14 DG n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DC n 2 9 DC n 2 10 DC n 2 11 DC n 2 12 DG n 2 13 DC n 2 14 DG n 3 1 ALA n 3 2 SER n 3 3 GLU n 3 4 LYS n 3 5 ARG n 3 6 PRO n 3 7 PHE n 3 8 MET n 3 9 CYS n 3 10 ALA n 3 11 TYR n 3 12 PRO n 3 13 GLY n 3 14 CYS n 3 15 ASN n 3 16 LYS n 3 17 ARG n 3 18 TYR n 3 19 PHE n 3 20 LYS n 3 21 LEU n 3 22 SER n 3 23 HIS n 3 24 LEU n 3 25 GLN n 3 26 MET n 3 27 HIS n 3 28 SER n 3 29 ARG n 3 30 LYS n 3 31 HIS n 3 32 THR n 3 33 GLY n 3 34 GLU n 3 35 LYS n 3 36 PRO n 3 37 TYR n 3 38 GLN n 3 39 CYS n 3 40 ASP n 3 41 PHE n 3 42 LYS n 3 43 ASP n 3 44 CYS n 3 45 GLU n 3 46 ARG n 3 47 ARG n 3 48 PHE n 3 49 SER n 3 50 ARG n 3 51 SER n 3 52 ASP n 3 53 GLN n 3 54 LEU n 3 55 LYS n 3 56 ARG n 3 57 HIS n 3 58 GLN n 3 59 ARG n 3 60 ARG n 3 61 HIS n 3 62 THR n 3 63 GLY n 3 64 VAL n 3 65 LYS n 3 66 PRO n 3 67 PHE n 3 68 GLN n 3 69 CYS n 3 70 LYS n 3 71 THR n 3 72 CYS n 3 73 GLN n 3 74 ARG n 3 75 LYS n 3 76 PHE n 3 77 SER n 3 78 ARG n 3 79 SER n 3 80 ASP n 3 81 HIS n 3 82 LEU n 3 83 LYS n 3 84 THR n 3 85 HIS n 3 86 THR n 3 87 ARG n 3 88 THR n 3 89 HIS n 3 90 THR n 3 91 GLY n 3 92 GLU n 3 93 LYS n 3 94 PRO n 3 95 PHE n 3 96 SER n 3 97 CYS n 3 98 ARG n 3 99 TRP n 3 100 PRO n 3 101 SER n 3 102 CYS n 3 103 GLN n 3 104 LYS n 3 105 LYS n 3 106 PHE n 3 107 ALA n 3 108 ARG n 3 109 SER n 3 110 ASP n 3 111 GLU n 3 112 LEU n 3 113 VAL n 3 114 ARG n 3 115 HIS n 3 116 HIS n 3 117 ASN n 3 118 MET n 3 119 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene WT1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q4VXV4_HUMAN Q4VXV4 3 ;SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH ; 174 ? 2 PDB 2PRT 2PRT 1 ? ? ? 3 PDB 2PRT 2PRT 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PRT A 2 ? 119 ? Q4VXV4 174 ? 291 ? 318 435 2 2 2PRT B 1 ? 14 ? 2PRT 1 ? 14 ? 1 14 3 3 2PRT C 1 ? 14 ? 2PRT 49 ? 62 ? 49 62 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2PRT _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q4VXV4 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 317 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2PRT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.97 _exptl_crystal.density_percent_sol 69.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.70 _exptl_crystal_grow.pdbx_details '10 mM d11-Tris/HCl, 20 mM KCl, 5uM ZnSO4, 2mM NaN3, 10% D2O, pH 6.7, SMALL TUBES, temperature 277K, pH 6.70' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 d11-Tris/HCl ? ? ? 1 2 2 d11-Tris/HCl ? ? ? 1 3 1 KCl ? ? ? 1 4 2 KCl ? ? ? 1 5 1 ZnSO4 ? ? ? 1 6 2 ZnSO4 ? ? ? 1 7 1 NaN3 ? ? ? 1 8 2 NaN3 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 97 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2002-02-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1921 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength 1.1921 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2PRT _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 42.8 _reflns.d_resolution_high 3.150 _reflns.number_obs 7166 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_sigmaI 22.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.2 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.150 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.435 _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.pdbx_redundancy 11.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2PRT _refine.ls_number_reflns_obs 6530 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 3.15 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.236 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.236 _refine.ls_R_factor_R_free 0.277 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entry 1AAY' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 983 _refine_hist.pdbx_number_atoms_nucleic_acid 526 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1513 _refine_hist.d_res_high 3.15 _refine_hist.d_res_low . # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 3.15 _refine_ls_shell.d_res_low ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.376 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.405 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PRT _struct.title 'Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PRT _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'Protein-DNA complex, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU C 21 ? ARG C 29 ? LEU A 337 ARG A 345 1 ? 9 HELX_P HELX_P2 2 LYS C 30 ? GLU C 34 ? LYS A 346 GLU A 350 5 ? 5 HELX_P HELX_P3 3 ARG C 50 ? GLY C 63 ? ARG A 366 GLY A 379 1 ? 14 HELX_P HELX_P4 4 ARG C 78 ? GLY C 91 ? ARG A 394 GLY A 407 1 ? 14 HELX_P HELX_P5 5 ARG C 108 ? ASN C 117 ? ARG A 424 ASN A 433 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? D ZN . ZN ? ? ? 1_555 C CYS 9 SG ? ? A ZN 201 A CYS 325 1_555 ? ? ? ? ? ? ? 2.799 ? ? metalc2 metalc ? ? D ZN . ZN ? ? ? 1_555 C CYS 14 SG ? ? A ZN 201 A CYS 330 1_555 ? ? ? ? ? ? ? 2.443 ? ? metalc3 metalc ? ? D ZN . ZN ? ? ? 1_555 C HIS 27 NE2 ? ? A ZN 201 A HIS 343 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc4 metalc ? ? D ZN . ZN ? ? ? 1_555 C HIS 31 NE2 ? ? A ZN 201 A HIS 347 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc5 metalc ? ? E ZN . ZN ? ? ? 1_555 C CYS 39 SG ? ? A ZN 202 A CYS 355 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 C CYS 44 SG ? ? A ZN 202 A CYS 360 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc7 metalc ? ? E ZN . ZN ? ? ? 1_555 C HIS 57 NE2 ? ? A ZN 202 A HIS 373 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc8 metalc ? ? E ZN . ZN ? ? ? 1_555 C HIS 61 NE2 ? ? A ZN 202 A HIS 377 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc9 metalc ? ? F ZN . ZN ? ? ? 1_555 C CYS 69 SG ? ? A ZN 203 A CYS 385 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc10 metalc ? ? F ZN . ZN ? ? ? 1_555 C CYS 72 SG ? ? A ZN 203 A CYS 388 1_555 ? ? ? ? ? ? ? 2.274 ? ? metalc11 metalc ? ? F ZN . ZN ? ? ? 1_555 C HIS 85 NE2 ? ? A ZN 203 A HIS 401 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc12 metalc ? ? F ZN . ZN ? ? ? 1_555 C HIS 89 NE2 ? ? A ZN 203 A HIS 405 1_555 ? ? ? ? ? ? ? 1.976 ? ? metalc13 metalc ? ? G ZN . ZN ? ? ? 1_555 C CYS 97 SG ? ? A ZN 204 A CYS 413 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc14 metalc ? ? G ZN . ZN ? ? ? 1_555 C CYS 102 SG ? ? A ZN 204 A CYS 418 1_555 ? ? ? ? ? ? ? 2.459 ? ? metalc15 metalc ? ? G ZN . ZN ? ? ? 1_555 C HIS 115 NE2 ? ? A ZN 204 A HIS 431 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc16 metalc ? ? G ZN . ZN ? ? ? 1_555 C HIS 119 NE2 ? ? A ZN 204 A HIS 435 1_555 ? ? ? ? ? ? ? 2.317 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 14 N1 ? ? B DC 1 C DG 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 14 O6 ? ? B DC 1 C DG 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 14 N2 ? ? B DC 1 C DG 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 13 N3 ? ? B DG 2 C DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 13 O2 ? ? B DG 2 C DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 13 N4 ? ? B DG 2 C DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 12 N1 ? ? B DC 3 C DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 12 O6 ? ? B DC 3 C DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 12 N2 ? ? B DC 3 C DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 11 N3 ? ? B DG 4 C DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 11 O2 ? ? B DG 4 C DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 11 N4 ? ? B DG 4 C DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 5 C DC 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 5 C DC 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 5 C DC 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 6 C DC 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 6 C DC 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 6 C DC 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 7 C DC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 7 C DC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 7 C DC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 7 N3 ? ? B DG 8 C DC 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 7 O2 ? ? B DG 8 C DC 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 7 N4 ? ? B DG 8 C DC 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 6 N1 ? ? B DC 9 C DG 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 6 O6 ? ? B DC 9 C DG 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 6 N2 ? ? B DC 9 C DG 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 10 C DC 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 10 C DC 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 10 C DC 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 4 N1 ? ? B DT 11 C DA 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 4 N6 ? ? B DT 11 C DA 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 3 N1 ? ? B DC 12 C DG 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 3 O6 ? ? B DC 12 C DG 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 3 N2 ? ? B DC 12 C DG 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE C 7 ? MET C 8 ? PHE A 323 MET A 324 A 2 ARG C 17 ? TYR C 18 ? ARG A 333 TYR A 334 B 1 TYR C 37 ? GLN C 38 ? TYR A 353 GLN A 354 B 2 ARG C 47 ? PHE C 48 ? ARG A 363 PHE A 364 C 1 PHE C 67 ? GLN C 68 ? PHE A 383 GLN A 384 C 2 LYS C 75 ? PHE C 76 ? LYS A 391 PHE A 392 D 1 PHE C 95 ? SER C 96 ? PHE A 411 SER A 412 D 2 LYS C 105 ? PHE C 106 ? LYS A 421 PHE A 422 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE C 7 ? N PHE A 323 O TYR C 18 ? O TYR A 334 B 1 2 N TYR C 37 ? N TYR A 353 O PHE C 48 ? O PHE A 364 C 1 2 N PHE C 67 ? N PHE A 383 O PHE C 76 ? O PHE A 392 D 1 2 N PHE C 95 ? N PHE A 411 O PHE C 106 ? O PHE A 422 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'BINDING SITE FOR RESIDUE ZN A 201' AC2 Software A ZN 202 ? 4 'BINDING SITE FOR RESIDUE ZN A 202' AC3 Software A ZN 203 ? 4 'BINDING SITE FOR RESIDUE ZN A 203' AC4 Software A ZN 204 ? 4 'BINDING SITE FOR RESIDUE ZN A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 9 ? CYS A 325 . ? 1_555 ? 2 AC1 4 CYS C 14 ? CYS A 330 . ? 1_555 ? 3 AC1 4 HIS C 27 ? HIS A 343 . ? 1_555 ? 4 AC1 4 HIS C 31 ? HIS A 347 . ? 1_555 ? 5 AC2 4 CYS C 39 ? CYS A 355 . ? 1_555 ? 6 AC2 4 CYS C 44 ? CYS A 360 . ? 1_555 ? 7 AC2 4 HIS C 57 ? HIS A 373 . ? 1_555 ? 8 AC2 4 HIS C 61 ? HIS A 377 . ? 1_555 ? 9 AC3 4 CYS C 69 ? CYS A 385 . ? 1_555 ? 10 AC3 4 CYS C 72 ? CYS A 388 . ? 1_555 ? 11 AC3 4 HIS C 85 ? HIS A 401 . ? 1_555 ? 12 AC3 4 HIS C 89 ? HIS A 405 . ? 1_555 ? 13 AC4 4 CYS C 97 ? CYS A 413 . ? 1_555 ? 14 AC4 4 CYS C 102 ? CYS A 418 . ? 1_555 ? 15 AC4 4 HIS C 115 ? HIS A 431 . ? 1_555 ? 16 AC4 4 HIS C 119 ? HIS A 435 . ? 1_555 ? # _database_PDB_matrix.entry_id 2PRT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2PRT _atom_sites.fract_transf_matrix[1][1] 0.011510 _atom_sites.fract_transf_matrix[1][2] 0.006645 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013291 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005841 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC B . n A 1 2 DG 2 2 2 DG DG B . n A 1 3 DC 3 3 3 DC DC B . n A 1 4 DG 4 4 4 DG DG B . n A 1 5 DG 5 5 5 DG DG B . n A 1 6 DG 6 6 6 DG DG B . n A 1 7 DG 7 7 7 DG DG B . n A 1 8 DG 8 8 8 DG DG B . n A 1 9 DC 9 9 9 DC DC B . n A 1 10 DG 10 10 10 DG DG B . n A 1 11 DT 11 11 11 DT DT B . n A 1 12 DC 12 12 12 DC DC B . n A 1 13 DT 13 13 ? ? ? B . n A 1 14 DG 14 14 ? ? ? B . n B 2 1 DC 1 49 49 DC DC C . n B 2 2 DA 2 50 50 DA DA C . n B 2 3 DG 3 51 51 DG DG C . n B 2 4 DA 4 52 52 DA DA C . n B 2 5 DC 5 53 53 DC DC C . n B 2 6 DG 6 54 54 DG DG C . n B 2 7 DC 7 55 55 DC DC C . n B 2 8 DC 8 56 56 DC DC C . n B 2 9 DC 9 57 57 DC DC C . n B 2 10 DC 10 58 58 DC DC C . n B 2 11 DC 11 59 59 DC DC C . n B 2 12 DG 12 60 60 DG DG C . n B 2 13 DC 13 61 61 DC DC C . n B 2 14 DG 14 62 62 DG DG C . n C 3 1 ALA 1 317 ? ? ? A . n C 3 2 SER 2 318 ? ? ? A . n C 3 3 GLU 3 319 ? ? ? A . n C 3 4 LYS 4 320 ? ? ? A . n C 3 5 ARG 5 321 321 ARG ARG A . n C 3 6 PRO 6 322 322 PRO PRO A . n C 3 7 PHE 7 323 323 PHE PHE A . n C 3 8 MET 8 324 324 MET MET A . n C 3 9 CYS 9 325 325 CYS CYS A . n C 3 10 ALA 10 326 326 ALA ALA A . n C 3 11 TYR 11 327 327 TYR TYR A . n C 3 12 PRO 12 328 328 PRO PRO A . n C 3 13 GLY 13 329 329 GLY GLY A . n C 3 14 CYS 14 330 330 CYS CYS A . n C 3 15 ASN 15 331 331 ASN ASN A . n C 3 16 LYS 16 332 332 LYS LYS A . n C 3 17 ARG 17 333 333 ARG ARG A . n C 3 18 TYR 18 334 334 TYR TYR A . n C 3 19 PHE 19 335 335 PHE PHE A . n C 3 20 LYS 20 336 336 LYS LYS A . n C 3 21 LEU 21 337 337 LEU LEU A . n C 3 22 SER 22 338 338 SER SER A . n C 3 23 HIS 23 339 339 HIS HIS A . n C 3 24 LEU 24 340 340 LEU LEU A . n C 3 25 GLN 25 341 341 GLN GLN A . n C 3 26 MET 26 342 342 MET MET A . n C 3 27 HIS 27 343 343 HIS HIS A . n C 3 28 SER 28 344 344 SER SER A . n C 3 29 ARG 29 345 345 ARG ARG A . n C 3 30 LYS 30 346 346 LYS LYS A . n C 3 31 HIS 31 347 347 HIS HIS A . n C 3 32 THR 32 348 348 THR THR A . n C 3 33 GLY 33 349 349 GLY GLY A . n C 3 34 GLU 34 350 350 GLU GLU A . n C 3 35 LYS 35 351 351 LYS LYS A . n C 3 36 PRO 36 352 352 PRO PRO A . n C 3 37 TYR 37 353 353 TYR TYR A . n C 3 38 GLN 38 354 354 GLN GLN A . n C 3 39 CYS 39 355 355 CYS CYS A . n C 3 40 ASP 40 356 356 ASP ASP A . n C 3 41 PHE 41 357 357 PHE PHE A . n C 3 42 LYS 42 358 358 LYS LYS A . n C 3 43 ASP 43 359 359 ASP ASP A . n C 3 44 CYS 44 360 360 CYS CYS A . n C 3 45 GLU 45 361 361 GLU GLU A . n C 3 46 ARG 46 362 362 ARG ARG A . n C 3 47 ARG 47 363 363 ARG ARG A . n C 3 48 PHE 48 364 364 PHE PHE A . n C 3 49 SER 49 365 365 SER SER A . n C 3 50 ARG 50 366 366 ARG ARG A . n C 3 51 SER 51 367 367 SER SER A . n C 3 52 ASP 52 368 368 ASP ASP A . n C 3 53 GLN 53 369 369 GLN GLN A . n C 3 54 LEU 54 370 370 LEU LEU A . n C 3 55 LYS 55 371 371 LYS LYS A . n C 3 56 ARG 56 372 372 ARG ARG A . n C 3 57 HIS 57 373 373 HIS HIS A . n C 3 58 GLN 58 374 374 GLN GLN A . n C 3 59 ARG 59 375 375 ARG ARG A . n C 3 60 ARG 60 376 376 ARG ARG A . n C 3 61 HIS 61 377 377 HIS HIS A . n C 3 62 THR 62 378 378 THR THR A . n C 3 63 GLY 63 379 379 GLY GLY A . n C 3 64 VAL 64 380 380 VAL VAL A . n C 3 65 LYS 65 381 381 LYS LYS A . n C 3 66 PRO 66 382 382 PRO PRO A . n C 3 67 PHE 67 383 383 PHE PHE A . n C 3 68 GLN 68 384 384 GLN GLN A . n C 3 69 CYS 69 385 385 CYS CYS A . n C 3 70 LYS 70 386 386 LYS LYS A . n C 3 71 THR 71 387 387 THR THR A . n C 3 72 CYS 72 388 388 CYS CYS A . n C 3 73 GLN 73 389 389 GLN GLN A . n C 3 74 ARG 74 390 390 ARG ARG A . n C 3 75 LYS 75 391 391 LYS LYS A . n C 3 76 PHE 76 392 392 PHE PHE A . n C 3 77 SER 77 393 393 SER SER A . n C 3 78 ARG 78 394 394 ARG ARG A . n C 3 79 SER 79 395 395 SER SER A . n C 3 80 ASP 80 396 396 ASP ASP A . n C 3 81 HIS 81 397 397 HIS HIS A . n C 3 82 LEU 82 398 398 LEU LEU A . n C 3 83 LYS 83 399 399 LYS LYS A . n C 3 84 THR 84 400 400 THR THR A . n C 3 85 HIS 85 401 401 HIS HIS A . n C 3 86 THR 86 402 402 THR THR A . n C 3 87 ARG 87 403 403 ARG ARG A . n C 3 88 THR 88 404 404 THR THR A . n C 3 89 HIS 89 405 405 HIS HIS A . n C 3 90 THR 90 406 406 THR THR A . n C 3 91 GLY 91 407 407 GLY GLY A . n C 3 92 GLU 92 408 408 GLU GLU A . n C 3 93 LYS 93 409 409 LYS LYS A . n C 3 94 PRO 94 410 410 PRO PRO A . n C 3 95 PHE 95 411 411 PHE PHE A . n C 3 96 SER 96 412 412 SER SER A . n C 3 97 CYS 97 413 413 CYS CYS A . n C 3 98 ARG 98 414 414 ARG ARG A . n C 3 99 TRP 99 415 415 TRP TRP A . n C 3 100 PRO 100 416 416 PRO PRO A . n C 3 101 SER 101 417 417 SER SER A . n C 3 102 CYS 102 418 418 CYS CYS A . n C 3 103 GLN 103 419 419 GLN GLN A . n C 3 104 LYS 104 420 420 LYS LYS A . n C 3 105 LYS 105 421 421 LYS LYS A . n C 3 106 PHE 106 422 422 PHE PHE A . n C 3 107 ALA 107 423 423 ALA ALA A . n C 3 108 ARG 108 424 424 ARG ARG A . n C 3 109 SER 109 425 425 SER SER A . n C 3 110 ASP 110 426 426 ASP ASP A . n C 3 111 GLU 111 427 427 GLU GLU A . n C 3 112 LEU 112 428 428 LEU LEU A . n C 3 113 VAL 113 429 429 VAL VAL A . n C 3 114 ARG 114 430 430 ARG ARG A . n C 3 115 HIS 115 431 431 HIS HIS A . n C 3 116 HIS 116 432 432 HIS HIS A . n C 3 117 ASN 117 433 433 ASN ASN A . n C 3 118 MET 118 434 434 MET MET A . n C 3 119 HIS 119 435 435 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 201 201 ZN ZN A . E 4 ZN 1 202 202 ZN ZN A . F 4 ZN 1 203 203 ZN ZN A . G 4 ZN 1 204 204 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4160 ? 1 MORE -17.3 ? 1 'SSA (A^2)' 11430 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 9 ? A CYS 325 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? C CYS 14 ? A CYS 330 ? 1_555 167.6 ? 2 SG ? C CYS 9 ? A CYS 325 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 NE2 ? C HIS 27 ? A HIS 343 ? 1_555 80.3 ? 3 SG ? C CYS 14 ? A CYS 330 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 NE2 ? C HIS 27 ? A HIS 343 ? 1_555 111.2 ? 4 SG ? C CYS 9 ? A CYS 325 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 NE2 ? C HIS 31 ? A HIS 347 ? 1_555 95.2 ? 5 SG ? C CYS 14 ? A CYS 330 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 NE2 ? C HIS 31 ? A HIS 347 ? 1_555 83.4 ? 6 NE2 ? C HIS 27 ? A HIS 343 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 NE2 ? C HIS 31 ? A HIS 347 ? 1_555 76.9 ? 7 SG ? C CYS 39 ? A CYS 355 ? 1_555 ZN ? E ZN . ? A ZN 202 ? 1_555 SG ? C CYS 44 ? A CYS 360 ? 1_555 139.0 ? 8 SG ? C CYS 39 ? A CYS 355 ? 1_555 ZN ? E ZN . ? A ZN 202 ? 1_555 NE2 ? C HIS 57 ? A HIS 373 ? 1_555 107.8 ? 9 SG ? C CYS 44 ? A CYS 360 ? 1_555 ZN ? E ZN . ? A ZN 202 ? 1_555 NE2 ? C HIS 57 ? A HIS 373 ? 1_555 102.2 ? 10 SG ? C CYS 39 ? A CYS 355 ? 1_555 ZN ? E ZN . ? A ZN 202 ? 1_555 NE2 ? C HIS 61 ? A HIS 377 ? 1_555 99.9 ? 11 SG ? C CYS 44 ? A CYS 360 ? 1_555 ZN ? E ZN . ? A ZN 202 ? 1_555 NE2 ? C HIS 61 ? A HIS 377 ? 1_555 106.3 ? 12 NE2 ? C HIS 57 ? A HIS 373 ? 1_555 ZN ? E ZN . ? A ZN 202 ? 1_555 NE2 ? C HIS 61 ? A HIS 377 ? 1_555 92.3 ? 13 SG ? C CYS 69 ? A CYS 385 ? 1_555 ZN ? F ZN . ? A ZN 203 ? 1_555 SG ? C CYS 72 ? A CYS 388 ? 1_555 85.8 ? 14 SG ? C CYS 69 ? A CYS 385 ? 1_555 ZN ? F ZN . ? A ZN 203 ? 1_555 NE2 ? C HIS 85 ? A HIS 401 ? 1_555 89.2 ? 15 SG ? C CYS 72 ? A CYS 388 ? 1_555 ZN ? F ZN . ? A ZN 203 ? 1_555 NE2 ? C HIS 85 ? A HIS 401 ? 1_555 76.3 ? 16 SG ? C CYS 69 ? A CYS 385 ? 1_555 ZN ? F ZN . ? A ZN 203 ? 1_555 NE2 ? C HIS 89 ? A HIS 405 ? 1_555 109.7 ? 17 SG ? C CYS 72 ? A CYS 388 ? 1_555 ZN ? F ZN . ? A ZN 203 ? 1_555 NE2 ? C HIS 89 ? A HIS 405 ? 1_555 151.4 ? 18 NE2 ? C HIS 85 ? A HIS 401 ? 1_555 ZN ? F ZN . ? A ZN 203 ? 1_555 NE2 ? C HIS 89 ? A HIS 405 ? 1_555 126.0 ? 19 SG ? C CYS 97 ? A CYS 413 ? 1_555 ZN ? G ZN . ? A ZN 204 ? 1_555 SG ? C CYS 102 ? A CYS 418 ? 1_555 138.6 ? 20 SG ? C CYS 97 ? A CYS 413 ? 1_555 ZN ? G ZN . ? A ZN 204 ? 1_555 NE2 ? C HIS 115 ? A HIS 431 ? 1_555 122.7 ? 21 SG ? C CYS 102 ? A CYS 418 ? 1_555 ZN ? G ZN . ? A ZN 204 ? 1_555 NE2 ? C HIS 115 ? A HIS 431 ? 1_555 97.5 ? 22 SG ? C CYS 97 ? A CYS 413 ? 1_555 ZN ? G ZN . ? A ZN 204 ? 1_555 NE2 ? C HIS 119 ? A HIS 435 ? 1_555 107.0 ? 23 SG ? C CYS 102 ? A CYS 418 ? 1_555 ZN ? G ZN . ? A ZN 204 ? 1_555 NE2 ? C HIS 119 ? A HIS 435 ? 1_555 81.9 ? 24 NE2 ? C HIS 115 ? A HIS 431 ? 1_555 ZN ? G ZN . ? A ZN 204 ? 1_555 NE2 ? C HIS 119 ? A HIS 435 ? 1_555 87.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-03-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 3 'Structure model' '_struct_ref_seq_dif.details' 16 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _software.name CNS _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 3 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 3 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.19 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 1.89 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 335 ? ? -30.95 -74.39 2 1 ARG A 345 ? ? -48.49 -17.46 3 1 HIS A 347 ? ? -57.35 -5.38 4 1 THR A 348 ? ? -19.56 -44.40 5 1 ASP A 356 ? ? -75.28 43.30 6 1 ASP A 359 ? ? 55.84 -1.95 7 1 HIS A 377 ? ? -95.30 -69.49 8 1 THR A 387 ? ? -96.74 -65.10 9 1 GLN A 389 ? ? 59.68 15.48 10 1 PRO A 416 ? ? -54.29 101.14 11 1 SER A 417 ? ? 59.00 -10.43 12 1 CYS A 418 ? ? -67.08 72.49 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC B 3 ? ? 0.079 'SIDE CHAIN' 2 1 DG B 5 ? ? 0.055 'SIDE CHAIN' 3 1 DG B 6 ? ? 0.079 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B DT 13 ? A DT 13 2 1 Y 1 B DG 14 ? A DG 14 3 1 Y 1 A ALA 317 ? C ALA 1 4 1 Y 1 A SER 318 ? C SER 2 5 1 Y 1 A GLU 319 ? C GLU 3 6 1 Y 1 A LYS 320 ? C LYS 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 LEU N N N N 301 LEU CA C N S 302 LEU C C N N 303 LEU O O N N 304 LEU CB C N N 305 LEU CG C N N 306 LEU CD1 C N N 307 LEU CD2 C N N 308 LEU OXT O N N 309 LEU H H N N 310 LEU H2 H N N 311 LEU HA H N N 312 LEU HB2 H N N 313 LEU HB3 H N N 314 LEU HG H N N 315 LEU HD11 H N N 316 LEU HD12 H N N 317 LEU HD13 H N N 318 LEU HD21 H N N 319 LEU HD22 H N N 320 LEU HD23 H N N 321 LEU HXT H N N 322 LYS N N N N 323 LYS CA C N S 324 LYS C C N N 325 LYS O O N N 326 LYS CB C N N 327 LYS CG C N N 328 LYS CD C N N 329 LYS CE C N N 330 LYS NZ N N N 331 LYS OXT O N N 332 LYS H H N N 333 LYS H2 H N N 334 LYS HA H N N 335 LYS HB2 H N N 336 LYS HB3 H N N 337 LYS HG2 H N N 338 LYS HG3 H N N 339 LYS HD2 H N N 340 LYS HD3 H N N 341 LYS HE2 H N N 342 LYS HE3 H N N 343 LYS HZ1 H N N 344 LYS HZ2 H N N 345 LYS HZ3 H N N 346 LYS HXT H N N 347 MET N N N N 348 MET CA C N S 349 MET C C N N 350 MET O O N N 351 MET CB C N N 352 MET CG C N N 353 MET SD S N N 354 MET CE C N N 355 MET OXT O N N 356 MET H H N N 357 MET H2 H N N 358 MET HA H N N 359 MET HB2 H N N 360 MET HB3 H N N 361 MET HG2 H N N 362 MET HG3 H N N 363 MET HE1 H N N 364 MET HE2 H N N 365 MET HE3 H N N 366 MET HXT H N N 367 PHE N N N N 368 PHE CA C N S 369 PHE C C N N 370 PHE O O N N 371 PHE CB C N N 372 PHE CG C Y N 373 PHE CD1 C Y N 374 PHE CD2 C Y N 375 PHE CE1 C Y N 376 PHE CE2 C Y N 377 PHE CZ C Y N 378 PHE OXT O N N 379 PHE H H N N 380 PHE H2 H N N 381 PHE HA H N N 382 PHE HB2 H N N 383 PHE HB3 H N N 384 PHE HD1 H N N 385 PHE HD2 H N N 386 PHE HE1 H N N 387 PHE HE2 H N N 388 PHE HZ H N N 389 PHE HXT H N N 390 PRO N N N N 391 PRO CA C N S 392 PRO C C N N 393 PRO O O N N 394 PRO CB C N N 395 PRO CG C N N 396 PRO CD C N N 397 PRO OXT O N N 398 PRO H H N N 399 PRO HA H N N 400 PRO HB2 H N N 401 PRO HB3 H N N 402 PRO HG2 H N N 403 PRO HG3 H N N 404 PRO HD2 H N N 405 PRO HD3 H N N 406 PRO HXT H N N 407 SER N N N N 408 SER CA C N S 409 SER C C N N 410 SER O O N N 411 SER CB C N N 412 SER OG O N N 413 SER OXT O N N 414 SER H H N N 415 SER H2 H N N 416 SER HA H N N 417 SER HB2 H N N 418 SER HB3 H N N 419 SER HG H N N 420 SER HXT H N N 421 THR N N N N 422 THR CA C N S 423 THR C C N N 424 THR O O N N 425 THR CB C N R 426 THR OG1 O N N 427 THR CG2 C N N 428 THR OXT O N N 429 THR H H N N 430 THR H2 H N N 431 THR HA H N N 432 THR HB H N N 433 THR HG1 H N N 434 THR HG21 H N N 435 THR HG22 H N N 436 THR HG23 H N N 437 THR HXT H N N 438 TRP N N N N 439 TRP CA C N S 440 TRP C C N N 441 TRP O O N N 442 TRP CB C N N 443 TRP CG C Y N 444 TRP CD1 C Y N 445 TRP CD2 C Y N 446 TRP NE1 N Y N 447 TRP CE2 C Y N 448 TRP CE3 C Y N 449 TRP CZ2 C Y N 450 TRP CZ3 C Y N 451 TRP CH2 C Y N 452 TRP OXT O N N 453 TRP H H N N 454 TRP H2 H N N 455 TRP HA H N N 456 TRP HB2 H N N 457 TRP HB3 H N N 458 TRP HD1 H N N 459 TRP HE1 H N N 460 TRP HE3 H N N 461 TRP HZ2 H N N 462 TRP HZ3 H N N 463 TRP HH2 H N N 464 TRP HXT H N N 465 TYR N N N N 466 TYR CA C N S 467 TYR C C N N 468 TYR O O N N 469 TYR CB C N N 470 TYR CG C Y N 471 TYR CD1 C Y N 472 TYR CD2 C Y N 473 TYR CE1 C Y N 474 TYR CE2 C Y N 475 TYR CZ C Y N 476 TYR OH O N N 477 TYR OXT O N N 478 TYR H H N N 479 TYR H2 H N N 480 TYR HA H N N 481 TYR HB2 H N N 482 TYR HB3 H N N 483 TYR HD1 H N N 484 TYR HD2 H N N 485 TYR HE1 H N N 486 TYR HE2 H N N 487 TYR HH H N N 488 TYR HXT H N N 489 VAL N N N N 490 VAL CA C N S 491 VAL C C N N 492 VAL O O N N 493 VAL CB C N N 494 VAL CG1 C N N 495 VAL CG2 C N N 496 VAL OXT O N N 497 VAL H H N N 498 VAL H2 H N N 499 VAL HA H N N 500 VAL HB H N N 501 VAL HG11 H N N 502 VAL HG12 H N N 503 VAL HG13 H N N 504 VAL HG21 H N N 505 VAL HG22 H N N 506 VAL HG23 H N N 507 VAL HXT H N N 508 ZN ZN ZN N N 509 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 LEU N CA sing N N 299 LEU N H sing N N 300 LEU N H2 sing N N 301 LEU CA C sing N N 302 LEU CA CB sing N N 303 LEU CA HA sing N N 304 LEU C O doub N N 305 LEU C OXT sing N N 306 LEU CB CG sing N N 307 LEU CB HB2 sing N N 308 LEU CB HB3 sing N N 309 LEU CG CD1 sing N N 310 LEU CG CD2 sing N N 311 LEU CG HG sing N N 312 LEU CD1 HD11 sing N N 313 LEU CD1 HD12 sing N N 314 LEU CD1 HD13 sing N N 315 LEU CD2 HD21 sing N N 316 LEU CD2 HD22 sing N N 317 LEU CD2 HD23 sing N N 318 LEU OXT HXT sing N N 319 LYS N CA sing N N 320 LYS N H sing N N 321 LYS N H2 sing N N 322 LYS CA C sing N N 323 LYS CA CB sing N N 324 LYS CA HA sing N N 325 LYS C O doub N N 326 LYS C OXT sing N N 327 LYS CB CG sing N N 328 LYS CB HB2 sing N N 329 LYS CB HB3 sing N N 330 LYS CG CD sing N N 331 LYS CG HG2 sing N N 332 LYS CG HG3 sing N N 333 LYS CD CE sing N N 334 LYS CD HD2 sing N N 335 LYS CD HD3 sing N N 336 LYS CE NZ sing N N 337 LYS CE HE2 sing N N 338 LYS CE HE3 sing N N 339 LYS NZ HZ1 sing N N 340 LYS NZ HZ2 sing N N 341 LYS NZ HZ3 sing N N 342 LYS OXT HXT sing N N 343 MET N CA sing N N 344 MET N H sing N N 345 MET N H2 sing N N 346 MET CA C sing N N 347 MET CA CB sing N N 348 MET CA HA sing N N 349 MET C O doub N N 350 MET C OXT sing N N 351 MET CB CG sing N N 352 MET CB HB2 sing N N 353 MET CB HB3 sing N N 354 MET CG SD sing N N 355 MET CG HG2 sing N N 356 MET CG HG3 sing N N 357 MET SD CE sing N N 358 MET CE HE1 sing N N 359 MET CE HE2 sing N N 360 MET CE HE3 sing N N 361 MET OXT HXT sing N N 362 PHE N CA sing N N 363 PHE N H sing N N 364 PHE N H2 sing N N 365 PHE CA C sing N N 366 PHE CA CB sing N N 367 PHE CA HA sing N N 368 PHE C O doub N N 369 PHE C OXT sing N N 370 PHE CB CG sing N N 371 PHE CB HB2 sing N N 372 PHE CB HB3 sing N N 373 PHE CG CD1 doub Y N 374 PHE CG CD2 sing Y N 375 PHE CD1 CE1 sing Y N 376 PHE CD1 HD1 sing N N 377 PHE CD2 CE2 doub Y N 378 PHE CD2 HD2 sing N N 379 PHE CE1 CZ doub Y N 380 PHE CE1 HE1 sing N N 381 PHE CE2 CZ sing Y N 382 PHE CE2 HE2 sing N N 383 PHE CZ HZ sing N N 384 PHE OXT HXT sing N N 385 PRO N CA sing N N 386 PRO N CD sing N N 387 PRO N H sing N N 388 PRO CA C sing N N 389 PRO CA CB sing N N 390 PRO CA HA sing N N 391 PRO C O doub N N 392 PRO C OXT sing N N 393 PRO CB CG sing N N 394 PRO CB HB2 sing N N 395 PRO CB HB3 sing N N 396 PRO CG CD sing N N 397 PRO CG HG2 sing N N 398 PRO CG HG3 sing N N 399 PRO CD HD2 sing N N 400 PRO CD HD3 sing N N 401 PRO OXT HXT sing N N 402 SER N CA sing N N 403 SER N H sing N N 404 SER N H2 sing N N 405 SER CA C sing N N 406 SER CA CB sing N N 407 SER CA HA sing N N 408 SER C O doub N N 409 SER C OXT sing N N 410 SER CB OG sing N N 411 SER CB HB2 sing N N 412 SER CB HB3 sing N N 413 SER OG HG sing N N 414 SER OXT HXT sing N N 415 THR N CA sing N N 416 THR N H sing N N 417 THR N H2 sing N N 418 THR CA C sing N N 419 THR CA CB sing N N 420 THR CA HA sing N N 421 THR C O doub N N 422 THR C OXT sing N N 423 THR CB OG1 sing N N 424 THR CB CG2 sing N N 425 THR CB HB sing N N 426 THR OG1 HG1 sing N N 427 THR CG2 HG21 sing N N 428 THR CG2 HG22 sing N N 429 THR CG2 HG23 sing N N 430 THR OXT HXT sing N N 431 TRP N CA sing N N 432 TRP N H sing N N 433 TRP N H2 sing N N 434 TRP CA C sing N N 435 TRP CA CB sing N N 436 TRP CA HA sing N N 437 TRP C O doub N N 438 TRP C OXT sing N N 439 TRP CB CG sing N N 440 TRP CB HB2 sing N N 441 TRP CB HB3 sing N N 442 TRP CG CD1 doub Y N 443 TRP CG CD2 sing Y N 444 TRP CD1 NE1 sing Y N 445 TRP CD1 HD1 sing N N 446 TRP CD2 CE2 doub Y N 447 TRP CD2 CE3 sing Y N 448 TRP NE1 CE2 sing Y N 449 TRP NE1 HE1 sing N N 450 TRP CE2 CZ2 sing Y N 451 TRP CE3 CZ3 doub Y N 452 TRP CE3 HE3 sing N N 453 TRP CZ2 CH2 doub Y N 454 TRP CZ2 HZ2 sing N N 455 TRP CZ3 CH2 sing Y N 456 TRP CZ3 HZ3 sing N N 457 TRP CH2 HH2 sing N N 458 TRP OXT HXT sing N N 459 TYR N CA sing N N 460 TYR N H sing N N 461 TYR N H2 sing N N 462 TYR CA C sing N N 463 TYR CA CB sing N N 464 TYR CA HA sing N N 465 TYR C O doub N N 466 TYR C OXT sing N N 467 TYR CB CG sing N N 468 TYR CB HB2 sing N N 469 TYR CB HB3 sing N N 470 TYR CG CD1 doub Y N 471 TYR CG CD2 sing Y N 472 TYR CD1 CE1 sing Y N 473 TYR CD1 HD1 sing N N 474 TYR CD2 CE2 doub Y N 475 TYR CD2 HD2 sing N N 476 TYR CE1 CZ doub Y N 477 TYR CE1 HE1 sing N N 478 TYR CE2 CZ sing Y N 479 TYR CE2 HE2 sing N N 480 TYR CZ OH sing N N 481 TYR OH HH sing N N 482 TYR OXT HXT sing N N 483 VAL N CA sing N N 484 VAL N H sing N N 485 VAL N H2 sing N N 486 VAL CA C sing N N 487 VAL CA CB sing N N 488 VAL CA HA sing N N 489 VAL C O doub N N 490 VAL C OXT sing N N 491 VAL CB CG1 sing N N 492 VAL CB CG2 sing N N 493 VAL CB HB sing N N 494 VAL CG1 HG11 sing N N 495 VAL CG1 HG12 sing N N 496 VAL CG1 HG13 sing N N 497 VAL CG2 HG21 sing N N 498 VAL CG2 HG22 sing N N 499 VAL CG2 HG23 sing N N 500 VAL OXT HXT sing N N 501 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2PRT 'double helix' 2PRT 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 14 1_555 -0.054 -0.363 -0.169 -0.968 -4.382 -0.798 1 B_DC1:DG62_C B 1 ? C 62 ? 19 1 1 A DG 2 1_555 B DC 13 1_555 -0.629 -0.185 0.033 1.196 -9.296 0.694 2 B_DG2:DC61_C B 2 ? C 61 ? 19 1 1 A DC 3 1_555 B DG 12 1_555 0.245 -0.024 -0.175 9.561 -3.341 -2.545 3 B_DC3:DG60_C B 3 ? C 60 ? 19 1 1 A DG 4 1_555 B DC 11 1_555 -0.561 -0.264 0.646 5.438 1.219 4.474 4 B_DG4:DC59_C B 4 ? C 59 ? 19 1 1 A DG 5 1_555 B DC 10 1_555 0.432 0.023 -0.271 -3.459 -5.618 -3.278 5 B_DG5:DC58_C B 5 ? C 58 ? 19 1 1 A DG 6 1_555 B DC 9 1_555 -0.423 -0.095 0.070 3.504 7.463 -0.875 6 B_DG6:DC57_C B 6 ? C 57 ? 19 1 1 A DG 7 1_555 B DC 8 1_555 -0.264 -0.364 -0.340 -5.457 7.648 -2.234 7 B_DG7:DC56_C B 7 ? C 56 ? 19 1 1 A DG 8 1_555 B DC 7 1_555 -0.699 -0.282 -0.786 -9.171 5.830 1.692 8 B_DG8:DC55_C B 8 ? C 55 ? 19 1 1 A DC 9 1_555 B DG 6 1_555 -0.076 0.011 -0.582 2.949 -0.979 6.165 9 B_DC9:DG54_C B 9 ? C 54 ? 19 1 1 A DG 10 1_555 B DC 5 1_555 -0.199 0.223 -0.212 5.430 1.722 -4.025 10 B_DG10:DC53_C B 10 ? C 53 ? 19 1 1 A DT 11 1_555 B DA 4 1_555 -0.359 -0.199 -0.061 8.342 -7.923 3.828 11 B_DT11:DA52_C B 11 ? C 52 ? 20 1 1 A DC 12 1_555 B DG 3 1_555 -0.555 -0.017 -0.158 7.852 -4.498 -1.410 12 B_DC12:DG51_C B 12 ? C 51 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 14 1_555 A DG 2 1_555 B DC 13 1_555 0.357 1.489 3.376 -0.376 7.131 35.694 1.317 -0.629 3.594 11.492 0.605 36.379 1 BB_DC1DG2:DC61DG62_CC B 1 ? C 62 ? B 2 ? C 61 ? 1 A DG 2 1_555 B DC 13 1_555 A DC 3 1_555 B DG 12 1_555 0.670 -0.111 3.046 1.071 4.094 32.493 -0.855 -1.015 3.030 7.278 -1.905 32.760 2 BB_DG2DC3:DG60DC61_CC B 2 ? C 61 ? B 3 ? C 60 ? 1 A DC 3 1_555 B DG 12 1_555 A DG 4 1_555 B DC 11 1_555 0.226 -0.206 3.352 -7.209 1.316 35.789 -0.513 -1.374 3.238 2.114 11.581 36.507 3 BB_DC3DG4:DC59DG60_CC B 3 ? C 60 ? B 4 ? C 59 ? 1 A DG 4 1_555 B DC 11 1_555 A DG 5 1_555 B DC 10 1_555 -0.012 -0.408 3.608 10.505 9.707 34.462 -2.046 1.542 3.242 15.578 -16.861 37.229 4 BB_DG4DG5:DC58DC59_CC B 4 ? C 59 ? B 5 ? C 58 ? 1 A DG 5 1_555 B DC 10 1_555 A DG 6 1_555 B DC 9 1_555 -0.512 -0.602 3.038 -7.417 3.401 29.991 -1.737 -0.380 2.992 6.424 14.010 31.057 5 BB_DG5DG6:DC57DC58_CC B 5 ? C 58 ? B 6 ? C 57 ? 1 A DG 6 1_555 B DC 9 1_555 A DG 7 1_555 B DC 8 1_555 -0.727 -1.271 3.477 0.886 7.840 35.662 -3.136 1.285 3.119 12.611 -1.426 36.496 6 BB_DG6DG7:DC56DC57_CC B 6 ? C 57 ? B 7 ? C 56 ? 1 A DG 7 1_555 B DC 8 1_555 A DG 8 1_555 B DC 7 1_555 0.245 -0.580 3.649 2.643 4.414 28.880 -2.199 0.146 3.531 8.762 -5.247 29.325 7 BB_DG7DG8:DC55DC56_CC B 7 ? C 56 ? B 8 ? C 55 ? 1 A DG 8 1_555 B DC 7 1_555 A DC 9 1_555 B DG 6 1_555 0.274 -0.485 2.945 -1.505 8.636 32.272 -2.102 -0.695 2.713 15.189 2.647 33.411 8 BB_DG8DC9:DG54DC55_CC B 8 ? C 55 ? B 9 ? C 54 ? 1 A DC 9 1_555 B DG 6 1_555 A DG 10 1_555 B DC 5 1_555 -1.395 -0.443 3.509 -6.966 0.931 32.815 -0.938 1.141 3.705 1.625 12.157 33.539 9 BB_DC9DG10:DC53DG54_CC B 9 ? C 54 ? B 10 ? C 53 ? 1 A DG 10 1_555 B DC 5 1_555 A DT 11 1_555 B DA 4 1_555 1.095 -0.863 3.259 0.861 3.510 30.913 -2.270 -1.878 3.173 6.556 -1.609 31.118 10 BB_DG10DT11:DA52DC53_CC B 10 ? C 53 ? B 11 ? C 52 ? 1 A DT 11 1_555 B DA 4 1_555 A DC 12 1_555 B DG 3 1_555 -1.178 0.263 3.287 -0.221 5.609 32.501 -0.504 2.038 3.293 9.930 0.392 32.970 11 BB_DT11DC12:DG51DA52_CC B 11 ? C 52 ? B 12 ? C 51 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AAY _pdbx_initial_refinement_model.details 'PDB entry 1AAY' #