HEADER ELECTRON TRANSPORT 09-MAY-07 2PUK TITLE CRYSTAL STRUCTURE OF THE BINARY COMPLEX BETWEEN FERREDOXIN: TITLE 2 THIOREDOXIN REDUCTASE AND THIOREDOXIN M COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN-THIOREDOXIN REDUCTASE, CATALYTIC CHAIN; COMPND 3 CHAIN: A, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAIN; COMPND 7 CHAIN: B, F; COMPND 8 SYNONYM: FTR-V, FERREDOXIN- THIOREDOXIN REDUCTASE SUBUNIT A; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: THIOREDOXIN M-TYPE, CHLOROPLAST (TRX-M); COMPND 13 CHAIN: C, G; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP.; SOURCE 3 ORGANISM_TAXID: 1143; SOURCE 4 GENE: FTRC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-3C; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP.; SOURCE 12 ORGANISM_TAXID: 1143; SOURCE 13 GENE: FTRV; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET-3C; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: SPINACIA OLERACEA; SOURCE 21 ORGANISM_COMMON: SPINACH; SOURCE 22 ORGANISM_TAXID: 3562; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 25 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 26 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 27 EXPRESSION_SYSTEM_PLASMID: PET-3C KEYWDS THIOREDOXIN, PROTEIN-PROTEIN COMPLEX, REDOX, IRON-SULFUR, ELECTRON KEYWDS 2 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.DAI,R.FRIEMANN,P.SCHURMANN,H.EKLUND REVDAT 5 20-OCT-21 2PUK 1 REMARK SEQADV REVDAT 4 18-SEP-13 2PUK 1 REMARK VERSN REVDAT 3 24-FEB-09 2PUK 1 VERSN REVDAT 2 14-AUG-07 2PUK 1 JRNL REVDAT 1 10-JUL-07 2PUK 0 JRNL AUTH S.DAI,R.FRIEMANN,D.A.GLAUSER,F.BOURQUIN,W.MANIERI, JRNL AUTH 2 P.SCHURMANN,H.EKLUND JRNL TITL STRUCTURAL SNAPSHOTS ALONG THE REACTION PATHWAY OF JRNL TITL 2 FERREDOXIN-THIOREDOXIN REDUCTASE. JRNL REF NATURE V. 448 92 2007 JRNL REFN ISSN 0028-0836 JRNL PMID 17611542 JRNL DOI 10.1038/NATURE05937 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13469 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 663 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 888 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4562 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.21000 REMARK 3 B22 (A**2) : -1.43000 REMARK 3 B33 (A**2) : -2.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.518 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.424 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.935 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.907 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.863 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4705 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6477 ; 1.505 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 568 ; 5.015 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 215 ;35.667 ;24.698 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 810 ;17.671 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.792 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 710 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3534 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2131 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3120 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 107 ; 0.108 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 52 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2964 ; 0.318 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4678 ; 0.578 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1977 ; 0.480 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1675 ; 0.817 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2PUK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042786. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13477 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 145.865 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : 0.10000 REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.29100 REMARK 200 R SYM FOR SHELL (I) : 0.29100 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.11150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 7 REMARK 465 SER G 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 70 -3.14 65.16 REMARK 500 HIS B 21 33.01 -143.30 REMARK 500 THR B 40 -32.69 -138.02 REMARK 500 PHE B 57 -156.46 -105.74 REMARK 500 ARG B 60 14.29 56.69 REMARK 500 VAL C 9 109.14 67.43 REMARK 500 ASN C 13 -166.91 -113.76 REMARK 500 VAL C 21 -64.09 -108.13 REMARK 500 LYS C 110 -4.45 -58.27 REMARK 500 LEU C 112 -146.93 -77.69 REMARK 500 CYS E 57 40.58 -102.56 REMARK 500 ASP E 94 32.25 -92.85 REMARK 500 ARG F 6 99.30 -68.20 REMARK 500 HIS F 21 56.39 -143.06 REMARK 500 GLN F 29 115.10 -31.84 REMARK 500 PHE F 57 -162.48 -119.54 REMARK 500 VAL G 9 132.88 70.39 REMARK 500 ASN G 13 -157.33 -148.96 REMARK 500 ARG G 78 -83.13 -116.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1000 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 55 SG REMARK 620 2 SF4 A1000 S1 139.1 REMARK 620 3 SF4 A1000 S2 94.2 104.2 REMARK 620 4 SF4 A1000 S3 106.0 104.3 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1000 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 74 SG REMARK 620 2 SF4 A1000 S1 120.5 REMARK 620 3 SF4 A1000 S2 105.6 105.0 REMARK 620 4 SF4 A1000 S4 115.7 104.1 104.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1000 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 76 SG REMARK 620 2 SF4 A1000 S2 112.9 REMARK 620 3 SF4 A1000 S3 121.8 104.7 REMARK 620 4 SF4 A1000 S4 107.4 104.6 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1000 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 85 SG REMARK 620 2 SF4 A1000 S1 110.6 REMARK 620 3 SF4 A1000 S3 115.9 105.1 REMARK 620 4 SF4 A1000 S4 115.5 104.5 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 E1000 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 55 SG REMARK 620 2 SF4 E1000 S1 132.7 REMARK 620 3 SF4 E1000 S2 92.8 104.4 REMARK 620 4 SF4 E1000 S3 113.9 103.8 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 E1000 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 74 SG REMARK 620 2 SF4 E1000 S1 121.0 REMARK 620 3 SF4 E1000 S2 112.7 104.4 REMARK 620 4 SF4 E1000 S4 108.2 104.3 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 E1000 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 76 SG REMARK 620 2 SF4 E1000 S2 114.9 REMARK 620 3 SF4 E1000 S3 111.2 104.9 REMARK 620 4 SF4 E1000 S4 116.2 104.5 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 E1000 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 85 SG REMARK 620 2 SF4 E1000 S1 117.5 REMARK 620 3 SF4 E1000 S3 109.5 104.5 REMARK 620 4 SF4 E1000 S4 114.9 104.3 104.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 E 1000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PU9 RELATED DB: PDB REMARK 900 THE SAME FERREDOXIN:THIOREDOXIN REDUCTASE COMPLEXED WITH REMARK 900 THIOREDOXIN M DBREF 2PUK A 8 115 UNP Q55389 Q55389_SYNY3 9 116 DBREF 2PUK B 1 73 UNP Q55781 FTRV_SYNY3 1 73 DBREF 2PUK C 8 113 UNP P07591 TRXM_SPIOL 75 180 DBREF 2PUK E 8 115 UNP Q55389 Q55389_SYNY3 9 116 DBREF 2PUK F 1 73 UNP Q55781 FTRV_SYNY3 1 73 DBREF 2PUK G 8 113 UNP P07591 TRXM_SPIOL 75 180 SEQADV 2PUK ASN A 7 UNP Q55389 CLONING ARTIFACT SEQADV 2PUK SER C 40 UNP P07591 CYS 107 ENGINEERED MUTATION SEQADV 2PUK ASN E 7 UNP Q55389 CLONING ARTIFACT SEQADV 2PUK SER G 40 UNP P07591 CYS 107 ENGINEERED MUTATION SEQRES 1 A 109 ASN ASN LYS THR LEU ALA ALA MET LYS ASN PHE ALA GLU SEQRES 2 A 109 GLN TYR ALA LYS ARG THR ASP THR TYR PHE CYS SER ASP SEQRES 3 A 109 LEU SER VAL THR ALA VAL VAL ILE GLU GLY LEU ALA ARG SEQRES 4 A 109 HIS LYS GLU GLU LEU GLY SER PRO LEU CYS PRO CYS ARG SEQRES 5 A 109 HIS TYR GLU ASP LYS GLU ALA GLU VAL LYS ASN THR PHE SEQRES 6 A 109 TRP ASN CYS PRO CYS VAL PRO MET ARG GLU ARG LYS GLU SEQRES 7 A 109 CYS HIS CYS MET LEU PHE LEU THR PRO ASP ASN ASP PHE SEQRES 8 A 109 ALA GLY ASP ALA GLN ASP ILE PRO MET GLU THR LEU GLU SEQRES 9 A 109 GLU VAL LYS ALA SER SEQRES 1 B 73 MET ASN VAL GLY ASP ARG VAL ARG VAL THR SER SER VAL SEQRES 2 B 73 VAL VAL TYR HIS HIS PRO GLU HIS LYS LYS THR ALA PHE SEQRES 3 B 73 ASP LEU GLN GLY MET GLU GLY GLU VAL ALA ALA VAL LEU SEQRES 4 B 73 THR GLU TRP GLN GLY ARG PRO ILE SER ALA ASN LEU PRO SEQRES 5 B 73 VAL LEU VAL LYS PHE GLU GLN ARG PHE LYS ALA HIS PHE SEQRES 6 B 73 ARG PRO ASP GLU VAL THR LEU ILE SEQRES 1 C 106 GLU VAL GLN ASP VAL ASN ASP SER SER TRP LYS GLU PHE SEQRES 2 C 106 VAL LEU GLU SER GLU VAL PRO VAL MET VAL ASP PHE TRP SEQRES 3 C 106 ALA PRO TRP CYS GLY PRO SER LYS LEU ILE ALA PRO VAL SEQRES 4 C 106 ILE ASP GLU LEU ALA LYS GLU TYR SER GLY LYS ILE ALA SEQRES 5 C 106 VAL TYR LYS LEU ASN THR ASP GLU ALA PRO GLY ILE ALA SEQRES 6 C 106 THR GLN TYR ASN ILE ARG SER ILE PRO THR VAL LEU PHE SEQRES 7 C 106 PHE LYS ASN GLY GLU ARG LYS GLU SER ILE ILE GLY ALA SEQRES 8 C 106 VAL PRO LYS SER THR LEU THR ASP SER ILE GLU LYS TYR SEQRES 9 C 106 LEU SER SEQRES 1 E 109 ASN ASN LYS THR LEU ALA ALA MET LYS ASN PHE ALA GLU SEQRES 2 E 109 GLN TYR ALA LYS ARG THR ASP THR TYR PHE CYS SER ASP SEQRES 3 E 109 LEU SER VAL THR ALA VAL VAL ILE GLU GLY LEU ALA ARG SEQRES 4 E 109 HIS LYS GLU GLU LEU GLY SER PRO LEU CYS PRO CYS ARG SEQRES 5 E 109 HIS TYR GLU ASP LYS GLU ALA GLU VAL LYS ASN THR PHE SEQRES 6 E 109 TRP ASN CYS PRO CYS VAL PRO MET ARG GLU ARG LYS GLU SEQRES 7 E 109 CYS HIS CYS MET LEU PHE LEU THR PRO ASP ASN ASP PHE SEQRES 8 E 109 ALA GLY ASP ALA GLN ASP ILE PRO MET GLU THR LEU GLU SEQRES 9 E 109 GLU VAL LYS ALA SER SEQRES 1 F 73 MET ASN VAL GLY ASP ARG VAL ARG VAL THR SER SER VAL SEQRES 2 F 73 VAL VAL TYR HIS HIS PRO GLU HIS LYS LYS THR ALA PHE SEQRES 3 F 73 ASP LEU GLN GLY MET GLU GLY GLU VAL ALA ALA VAL LEU SEQRES 4 F 73 THR GLU TRP GLN GLY ARG PRO ILE SER ALA ASN LEU PRO SEQRES 5 F 73 VAL LEU VAL LYS PHE GLU GLN ARG PHE LYS ALA HIS PHE SEQRES 6 F 73 ARG PRO ASP GLU VAL THR LEU ILE SEQRES 1 G 106 GLU VAL GLN ASP VAL ASN ASP SER SER TRP LYS GLU PHE SEQRES 2 G 106 VAL LEU GLU SER GLU VAL PRO VAL MET VAL ASP PHE TRP SEQRES 3 G 106 ALA PRO TRP CYS GLY PRO SER LYS LEU ILE ALA PRO VAL SEQRES 4 G 106 ILE ASP GLU LEU ALA LYS GLU TYR SER GLY LYS ILE ALA SEQRES 5 G 106 VAL TYR LYS LEU ASN THR ASP GLU ALA PRO GLY ILE ALA SEQRES 6 G 106 THR GLN TYR ASN ILE ARG SER ILE PRO THR VAL LEU PHE SEQRES 7 G 106 PHE LYS ASN GLY GLU ARG LYS GLU SER ILE ILE GLY ALA SEQRES 8 G 106 VAL PRO LYS SER THR LEU THR ASP SER ILE GLU LYS TYR SEQRES 9 G 106 LEU SER HET SF4 A1000 8 HET SF4 E1000 8 HETNAM SF4 IRON/SULFUR CLUSTER FORMUL 7 SF4 2(FE4 S4) HELIX 1 1 LYS A 9 THR A 25 1 17 HELIX 2 2 ASP A 32 GLY A 51 1 20 HELIX 3 3 ASP A 62 THR A 70 1 9 HELIX 4 4 CYS A 76 ARG A 82 1 7 HELIX 5 5 PRO A 105 SER A 115 1 11 HELIX 6 6 HIS B 18 LYS B 22 5 5 HELIX 7 7 GLU B 58 ARG B 60 5 3 HELIX 8 8 ARG B 66 ASP B 68 5 3 HELIX 9 9 SER C 16 VAL C 21 1 6 HELIX 10 10 CYS C 37 TYR C 54 1 18 HELIX 11 11 ALA C 68 TYR C 75 1 8 HELIX 12 12 PRO C 100 LYS C 110 1 11 HELIX 13 13 LYS E 9 ASP E 26 1 18 HELIX 14 14 ASP E 32 GLY E 51 1 20 HELIX 15 15 ASP E 62 THR E 70 1 9 HELIX 16 16 CYS E 76 LYS E 83 1 8 HELIX 17 17 PRO E 105 SER E 115 1 11 HELIX 18 18 ARG F 66 ASP F 68 5 3 HELIX 19 19 SER G 16 VAL G 21 1 6 HELIX 20 20 GLY G 38 ILE G 43 1 6 HELIX 21 21 ILE G 43 TYR G 54 1 12 HELIX 22 22 ALA G 68 TYR G 75 1 8 HELIX 23 23 PRO G 100 LYS G 110 1 11 SHEET 1 A 5 LYS B 62 PHE B 65 0 SHEET 2 A 5 VAL B 53 LYS B 56 -1 N VAL B 55 O ALA B 63 SHEET 3 A 5 GLU B 32 VAL B 38 -1 N GLU B 34 O LYS B 56 SHEET 4 A 5 ARG B 6 VAL B 9 -1 N VAL B 7 O GLY B 33 SHEET 5 A 5 VAL B 70 LEU B 72 -1 O THR B 71 N ARG B 8 SHEET 1 B 2 VAL B 14 VAL B 15 0 SHEET 2 B 2 PHE B 26 ASP B 27 -1 O PHE B 26 N VAL B 15 SHEET 1 C 2 GLU B 41 TRP B 42 0 SHEET 2 C 2 ARG B 45 PRO B 46 -1 O ARG B 45 N TRP B 42 SHEET 1 D 5 GLN C 10 ASP C 11 0 SHEET 2 D 5 ALA C 59 ASN C 64 1 O LYS C 62 N GLN C 10 SHEET 3 D 5 VAL C 28 TRP C 33 1 N MET C 29 O ALA C 59 SHEET 4 D 5 THR C 82 LYS C 87 -1 O PHE C 86 N VAL C 28 SHEET 5 D 5 GLU C 90 ILE C 96 -1 O LYS C 92 N PHE C 85 SHEET 1 E 5 PHE F 61 PHE F 65 0 SHEET 2 E 5 VAL F 53 PHE F 57 -1 N PHE F 57 O PHE F 61 SHEET 3 E 5 GLU F 32 VAL F 38 -1 N ALA F 37 O LEU F 54 SHEET 4 E 5 ARG F 6 VAL F 9 -1 N VAL F 7 O GLY F 33 SHEET 5 E 5 VAL F 70 THR F 71 -1 O THR F 71 N ARG F 8 SHEET 1 F 2 VAL F 14 VAL F 15 0 SHEET 2 F 2 PHE F 26 ASP F 27 -1 O PHE F 26 N VAL F 15 SHEET 1 G 2 GLU F 41 TRP F 42 0 SHEET 2 G 2 ARG F 45 PRO F 46 -1 O ARG F 45 N TRP F 42 SHEET 1 H 5 GLN G 10 ASP G 11 0 SHEET 2 H 5 ALA G 59 ASN G 64 1 O LYS G 62 N GLN G 10 SHEET 3 H 5 VAL G 28 TRP G 33 1 N ASP G 31 O LEU G 63 SHEET 4 H 5 THR G 82 LYS G 87 -1 O PHE G 86 N VAL G 28 SHEET 5 H 5 GLU G 90 ILE G 96 -1 O ILE G 95 N VAL G 83 SSBOND 1 CYS A 57 CYS C 37 1555 1555 2.05 SSBOND 2 CYS E 57 CYS G 37 1555 1555 2.05 LINK SG CYS A 55 FE4 SF4 A1000 1555 1555 2.45 LINK SG CYS A 74 FE3 SF4 A1000 1555 1555 2.58 LINK SG CYS A 76 FE1 SF4 A1000 1555 1555 2.19 LINK SG CYS A 85 FE2 SF4 A1000 1555 1555 2.34 LINK SG CYS E 55 FE4 SF4 E1000 1555 1555 2.53 LINK SG CYS E 74 FE3 SF4 E1000 1555 1555 2.39 LINK SG CYS E 76 FE1 SF4 E1000 1555 1555 2.40 LINK SG CYS E 85 FE2 SF4 E1000 1555 1555 2.23 CISPEP 1 CYS A 74 PRO A 75 0 1.20 CISPEP 2 ILE C 80 PRO C 81 0 3.29 CISPEP 3 CYS E 74 PRO E 75 0 5.09 CISPEP 4 ILE G 80 PRO G 81 0 5.78 SITE 1 AC1 8 CYS A 55 CYS A 74 CYS A 76 MET A 79 SITE 2 AC1 8 CYS A 85 HIS A 86 CYS A 87 PHE A 90 SITE 1 AC2 7 CYS E 55 CYS E 74 CYS E 76 MET E 79 SITE 2 AC2 7 CYS E 85 HIS E 86 CYS E 87 CRYST1 53.952 42.223 145.344 90.00 90.29 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018535 0.000000 0.000094 0.00000 SCALE2 0.000000 0.023684 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006880 0.00000