data_2PWW # _entry.id 2PWW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2PWW RCSB RCSB042867 WWPDB D_1000042867 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-10410f _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2PWW _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ramagopal, U.A.' 1 ? 'Freeman, J.' 2 ? 'Lau, C.' 3 ? 'Toro, R.' 4 ? 'Bain, K.' 5 ? 'Rodgers, L.' 6 ? 'Sauder, J.M.' 7 0000-0002-0254-4955 'Burley, S.K.' 8 0000-0002-2487-9713 'Almo, S.C.' 9 ? 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 10 ? # _citation.id primary _citation.title 'Crystal structure of ABC2387 from Bacillus clausii.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramagopal, U.A.' 1 ? primary 'Freeman, J.' 2 ? primary 'Lau, C.' 3 ? primary 'Toro, R.' 4 ? primary 'Bain, K.' 5 ? primary 'Rodgers, L.' 6 ? primary 'Sauder, J.M.' 7 ? primary 'Burley, S.K.' 8 0000-0002-2487-9713 primary 'Almo, S.C.' 9 ? # _cell.length_a 68.286 _cell.length_b 68.286 _cell.length_c 48.383 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 2PWW _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 64' _symmetry.entry_id 2PWW _symmetry.Int_Tables_number 172 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 14867.511 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 99 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SLKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERV(MSE)FDYKIVHHEGTFYLRVPAYAVKGEIPRPSTI VQI(MSE)TPILGKYYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEWEGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLKFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAVKGEIPRPSTIVQIMTPIL GKYYYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEWEGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-10410f # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 LEU n 1 4 LYS n 1 5 PHE n 1 6 PRO n 1 7 ASP n 1 8 THR n 1 9 GLY n 1 10 LEU n 1 11 GLU n 1 12 GLU n 1 13 LYS n 1 14 GLU n 1 15 VAL n 1 16 ALA n 1 17 PHE n 1 18 SER n 1 19 ILE n 1 20 VAL n 1 21 ASN n 1 22 HIS n 1 23 ALA n 1 24 ALA n 1 25 LYS n 1 26 SER n 1 27 LEU n 1 28 GLY n 1 29 PHE n 1 30 ILE n 1 31 HIS n 1 32 VAL n 1 33 ASP n 1 34 GLN n 1 35 TRP n 1 36 ASP n 1 37 TYR n 1 38 GLU n 1 39 ARG n 1 40 VAL n 1 41 MSE n 1 42 PHE n 1 43 ASP n 1 44 TYR n 1 45 LYS n 1 46 ILE n 1 47 VAL n 1 48 HIS n 1 49 HIS n 1 50 GLU n 1 51 GLY n 1 52 THR n 1 53 PHE n 1 54 TYR n 1 55 LEU n 1 56 ARG n 1 57 VAL n 1 58 PRO n 1 59 ALA n 1 60 TYR n 1 61 ALA n 1 62 VAL n 1 63 LYS n 1 64 GLY n 1 65 GLU n 1 66 ILE n 1 67 PRO n 1 68 ARG n 1 69 PRO n 1 70 SER n 1 71 THR n 1 72 ILE n 1 73 VAL n 1 74 GLN n 1 75 ILE n 1 76 MSE n 1 77 THR n 1 78 PRO n 1 79 ILE n 1 80 LEU n 1 81 GLY n 1 82 LYS n 1 83 TYR n 1 84 TYR n 1 85 TYR n 1 86 PRO n 1 87 HIS n 1 88 GLY n 1 89 VAL n 1 90 GLU n 1 91 TYR n 1 92 GLU n 1 93 GLY n 1 94 GLU n 1 95 THR n 1 96 PHE n 1 97 PRO n 1 98 GLN n 1 99 ALA n 1 100 VAL n 1 101 ILE n 1 102 ASP n 1 103 LYS n 1 104 CYS n 1 105 ASN n 1 106 ASN n 1 107 LYS n 1 108 LEU n 1 109 ALA n 1 110 LEU n 1 111 LEU n 1 112 ALA n 1 113 LYS n 1 114 THR n 1 115 ILE n 1 116 LYS n 1 117 ALA n 1 118 GLU n 1 119 TRP n 1 120 GLU n 1 121 GLY n 1 122 HIS n 1 123 HIS n 1 124 HIS n 1 125 HIS n 1 126 HIS n 1 127 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene ABC2387 _entity_src_gen.gene_src_species 'Bacillus clausii' _entity_src_gen.gene_src_strain KSM-K16 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus clausii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 66692 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'BC-pSGX3(BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5WFD8_BACSK _struct_ref.pdbx_db_accession Q5WFD8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KFPDTGLEEKEVAFSIVNHAAKSLGFIHVDQWDYERVMFDYKIVHHEGTFYLRVPAYAVKGEIPRPSTIVQIMTPILGKY YYPHGVEYEGETFPQAVIDKCNNKLALLAKTIKAEW ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PWW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 119 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5WFD8 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 117 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 117 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PWW MSE A 1 ? UNP Q5WFD8 ? ? 'cloning artifact' -1 1 1 2PWW SER A 2 ? UNP Q5WFD8 ? ? 'cloning artifact' 0 2 1 2PWW LEU A 3 ? UNP Q5WFD8 ? ? 'cloning artifact' 1 3 1 2PWW MSE A 41 ? UNP Q5WFD8 MET 39 'modified residue' 39 4 1 2PWW MSE A 76 ? UNP Q5WFD8 MET 74 'modified residue' 74 5 1 2PWW GLU A 120 ? UNP Q5WFD8 ? ? 'cloning artifact' 118 6 1 2PWW GLY A 121 ? UNP Q5WFD8 ? ? 'cloning artifact' 119 7 1 2PWW HIS A 122 ? UNP Q5WFD8 ? ? 'cloning artifact' 120 8 1 2PWW HIS A 123 ? UNP Q5WFD8 ? ? 'cloning artifact' 121 9 1 2PWW HIS A 124 ? UNP Q5WFD8 ? ? 'cloning artifact' 122 10 1 2PWW HIS A 125 ? UNP Q5WFD8 ? ? 'cloning artifact' 123 11 1 2PWW HIS A 126 ? UNP Q5WFD8 ? ? 'cloning artifact' 124 12 1 2PWW HIS A 127 ? UNP Q5WFD8 ? ? 'cloning artifact' 125 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2PWW _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.1M Sodium MES pH 6.5, 10% PEG 20000, Cryo: 10% Ethylene glycol, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 2PWW _reflns.d_resolution_high 1.820 _reflns.d_resolution_low 50.000 _reflns.number_obs 11674 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_netI_over_sigmaI 34.2 _reflns.pdbx_chi_squared 0.832 _reflns.pdbx_redundancy 12.1 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 11674 _reflns.pdbx_Rsym_value 0.087 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.82 _reflns_shell.d_res_low 1.89 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.502 _reflns_shell.meanI_over_sigI_obs 3.35 _reflns_shell.pdbx_Rsym_value 0.495 _reflns_shell.pdbx_chi_squared 0.441 _reflns_shell.pdbx_redundancy 5.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1146 _reflns_shell.percent_possible_all 99.9 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2PWW _refine.ls_d_res_high 1.820 _refine.ls_d_res_low 37.45 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.910 _refine.ls_number_reflns_obs 11655 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.201 _refine.ls_R_factor_R_work 0.200 _refine.ls_R_factor_R_free 0.234 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 554 _refine.B_iso_mean 23.033 _refine.aniso_B[1][1] 0.290 _refine.aniso_B[2][2] 0.290 _refine.aniso_B[3][3] -0.440 _refine.aniso_B[1][2] 0.150 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.pdbx_overall_ESU_R 0.143 _refine.pdbx_overall_ESU_R_Free 0.132 _refine.overall_SU_ML 0.091 _refine.overall_SU_B 2.914 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 0 _refine.ls_R_factor_all 0.201 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 932 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 1039 _refine_hist.d_res_high 1.820 _refine_hist.d_res_low 37.45 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 965 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1305 1.462 1.960 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 114 6.094 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43 30.008 23.953 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 162 16.003 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3 15.014 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 141 0.101 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 725 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 415 0.203 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 643 0.315 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 81 0.113 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 49 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 9 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 597 0.978 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 934 1.578 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 429 2.166 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 371 3.040 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.820 _refine_ls_shell.d_res_low 1.865 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.940 _refine_ls_shell.number_reflns_R_work 798 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.244 _refine_ls_shell.R_factor_R_free 0.389 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 840 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PWW _struct.title 'Crystal structure of ABC2387 from Bacillus clausii' _struct.pdbx_descriptor 'Uncharacterized protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PWW _struct_keywords.text ;structural genomics, unknown function, PSI-2, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 17 ? LEU A 27 ? PHE A 15 LEU A 25 1 ? 11 HELX_P HELX_P2 2 PRO A 97 ? LYS A 116 ? PRO A 95 LYS A 114 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 40 C ? ? ? 1_555 A MSE 41 N ? ? A VAL 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 41 C ? ? ? 1_555 A PHE 42 N ? ? A MSE 39 A PHE 40 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A ILE 75 C ? ? ? 1_555 A MSE 76 N ? ? A ILE 73 A MSE 74 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A THR 77 N ? ? A MSE 74 A THR 75 1_555 ? ? ? ? ? ? ? 1.323 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 66 A . ? ILE 64 A PRO 67 A ? PRO 65 A 1 4.45 2 TYR 85 A . ? TYR 83 A PRO 86 A ? PRO 84 A 1 -5.62 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 3 ? LYS A 4 ? LEU A 1 LYS A 2 A 2 ILE A 79 ? LYS A 82 ? ILE A 77 LYS A 80 A 3 GLY A 51 ? LYS A 63 ? GLY A 49 LYS A 61 A 4 ILE A 72 ? ILE A 75 ? ILE A 70 ILE A 73 A 5 VAL A 15 ? ALA A 16 ? VAL A 13 ALA A 14 B 1 LEU A 3 ? LYS A 4 ? LEU A 1 LYS A 2 B 2 ILE A 79 ? LYS A 82 ? ILE A 77 LYS A 80 B 3 GLY A 51 ? LYS A 63 ? GLY A 49 LYS A 61 B 4 ARG A 39 ? HIS A 48 ? ARG A 37 HIS A 46 B 5 ILE A 30 ? HIS A 31 ? ILE A 28 HIS A 29 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 3 ? N LEU A 1 O LEU A 80 ? O LEU A 78 A 2 3 O ILE A 79 ? O ILE A 77 N ARG A 56 ? N ARG A 54 A 3 4 N VAL A 62 ? N VAL A 60 O ILE A 72 ? O ILE A 70 A 4 5 O VAL A 73 ? O VAL A 71 N VAL A 15 ? N VAL A 13 B 1 2 N LEU A 3 ? N LEU A 1 O LEU A 80 ? O LEU A 78 B 2 3 O ILE A 79 ? O ILE A 77 N ARG A 56 ? N ARG A 54 B 3 4 O PHE A 53 ? O PHE A 51 N ILE A 46 ? N ILE A 44 B 4 5 O ASP A 43 ? O ASP A 41 N ILE A 30 ? N ILE A 28 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 201 ? 3 'BINDING SITE FOR RESIDUE EDO A 201' AC2 Software A EDO 202 ? 7 'BINDING SITE FOR RESIDUE EDO A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TYR A 83 ? TYR A 81 . ? 1_555 ? 2 AC1 3 TYR A 85 ? TYR A 83 . ? 1_555 ? 3 AC1 3 HOH D . ? HOH A 256 . ? 4_655 ? 4 AC2 7 HOH D . ? HOH A 212 . ? 4_655 ? 5 AC2 7 HOH D . ? HOH A 212 . ? 1_555 ? 6 AC2 7 HOH D . ? HOH A 235 . ? 4_655 ? 7 AC2 7 HOH D . ? HOH A 235 . ? 1_555 ? 8 AC2 7 HOH D . ? HOH A 271 . ? 1_555 ? 9 AC2 7 HOH D . ? HOH A 272 . ? 1_555 ? 10 AC2 7 HOH D . ? HOH A 272 . ? 4_655 ? # _atom_sites.entry_id 2PWW _atom_sites.fract_transf_matrix[1][1] 0.014644 _atom_sites.fract_transf_matrix[1][2] 0.008455 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016910 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020668 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -1 ? ? ? A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 LEU 3 1 1 LEU LEU A . n A 1 4 LYS 4 2 2 LYS LYS A . n A 1 5 PHE 5 3 3 PHE PHE A . n A 1 6 PRO 6 4 4 PRO PRO A . n A 1 7 ASP 7 5 5 ASP ASP A . n A 1 8 THR 8 6 6 THR THR A . n A 1 9 GLY 9 7 7 GLY GLY A . n A 1 10 LEU 10 8 8 LEU LEU A . n A 1 11 GLU 11 9 9 GLU GLU A . n A 1 12 GLU 12 10 10 GLU GLU A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 GLU 14 12 12 GLU GLU A . n A 1 15 VAL 15 13 13 VAL VAL A . n A 1 16 ALA 16 14 14 ALA ALA A . n A 1 17 PHE 17 15 15 PHE PHE A . n A 1 18 SER 18 16 16 SER SER A . n A 1 19 ILE 19 17 17 ILE ILE A . n A 1 20 VAL 20 18 18 VAL VAL A . n A 1 21 ASN 21 19 19 ASN ASN A . n A 1 22 HIS 22 20 20 HIS HIS A . n A 1 23 ALA 23 21 21 ALA ALA A . n A 1 24 ALA 24 22 22 ALA ALA A . n A 1 25 LYS 25 23 23 LYS LYS A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 LEU 27 25 25 LEU LEU A . n A 1 28 GLY 28 26 26 GLY GLY A . n A 1 29 PHE 29 27 27 PHE PHE A . n A 1 30 ILE 30 28 28 ILE ILE A . n A 1 31 HIS 31 29 29 HIS HIS A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 ASP 33 31 31 ASP ASP A . n A 1 34 GLN 34 32 32 GLN GLN A . n A 1 35 TRP 35 33 33 TRP TRP A . n A 1 36 ASP 36 34 34 ASP ASP A . n A 1 37 TYR 37 35 35 TYR TYR A . n A 1 38 GLU 38 36 36 GLU GLU A . n A 1 39 ARG 39 37 37 ARG ARG A . n A 1 40 VAL 40 38 38 VAL VAL A . n A 1 41 MSE 41 39 39 MSE MSE A . n A 1 42 PHE 42 40 40 PHE PHE A . n A 1 43 ASP 43 41 41 ASP ASP A . n A 1 44 TYR 44 42 42 TYR TYR A . n A 1 45 LYS 45 43 43 LYS LYS A . n A 1 46 ILE 46 44 44 ILE ILE A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 HIS 48 46 46 HIS HIS A . n A 1 49 HIS 49 47 47 HIS HIS A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 GLY 51 49 49 GLY GLY A . n A 1 52 THR 52 50 50 THR THR A . n A 1 53 PHE 53 51 51 PHE PHE A . n A 1 54 TYR 54 52 52 TYR TYR A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 ARG 56 54 54 ARG ARG A . n A 1 57 VAL 57 55 55 VAL VAL A . n A 1 58 PRO 58 56 56 PRO PRO A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 TYR 60 58 58 TYR TYR A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 VAL 62 60 60 VAL VAL A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 GLY 64 62 62 GLY GLY A . n A 1 65 GLU 65 63 63 GLU GLU A . n A 1 66 ILE 66 64 64 ILE ILE A . n A 1 67 PRO 67 65 65 PRO PRO A . n A 1 68 ARG 68 66 66 ARG ARG A . n A 1 69 PRO 69 67 67 PRO PRO A . n A 1 70 SER 70 68 68 SER SER A . n A 1 71 THR 71 69 69 THR THR A . n A 1 72 ILE 72 70 70 ILE ILE A . n A 1 73 VAL 73 71 71 VAL VAL A . n A 1 74 GLN 74 72 72 GLN GLN A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 MSE 76 74 74 MSE MSE A . n A 1 77 THR 77 75 75 THR THR A . n A 1 78 PRO 78 76 76 PRO PRO A . n A 1 79 ILE 79 77 77 ILE ILE A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 GLY 81 79 79 GLY GLY A . n A 1 82 LYS 82 80 80 LYS LYS A . n A 1 83 TYR 83 81 81 TYR TYR A . n A 1 84 TYR 84 82 82 TYR TYR A . n A 1 85 TYR 85 83 83 TYR TYR A . n A 1 86 PRO 86 84 84 PRO PRO A . n A 1 87 HIS 87 85 85 HIS HIS A . n A 1 88 GLY 88 86 86 GLY GLY A . n A 1 89 VAL 89 87 87 VAL VAL A . n A 1 90 GLU 90 88 88 GLU GLU A . n A 1 91 TYR 91 89 89 TYR TYR A . n A 1 92 GLU 92 90 90 GLU GLU A . n A 1 93 GLY 93 91 91 GLY GLY A . n A 1 94 GLU 94 92 92 GLU GLU A . n A 1 95 THR 95 93 93 THR THR A . n A 1 96 PHE 96 94 94 PHE PHE A . n A 1 97 PRO 97 95 95 PRO PRO A . n A 1 98 GLN 98 96 96 GLN GLN A . n A 1 99 ALA 99 97 97 ALA ALA A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 ILE 101 99 99 ILE ILE A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 LYS 103 101 101 LYS LYS A . n A 1 104 CYS 104 102 102 CYS CYS A . n A 1 105 ASN 105 103 103 ASN ASN A . n A 1 106 ASN 106 104 104 ASN ASN A . n A 1 107 LYS 107 105 105 LYS LYS A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 ALA 109 107 107 ALA ALA A . n A 1 110 LEU 110 108 108 LEU LEU A . n A 1 111 LEU 111 109 109 LEU LEU A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 LYS 113 111 111 LYS LYS A . n A 1 114 THR 114 112 112 THR THR A . n A 1 115 ILE 115 113 113 ILE ILE A . n A 1 116 LYS 116 114 114 LYS LYS A . n A 1 117 ALA 117 115 ? ? ? A . n A 1 118 GLU 118 116 ? ? ? A . n A 1 119 TRP 119 117 ? ? ? A . n A 1 120 GLU 120 118 ? ? ? A . n A 1 121 GLY 121 119 ? ? ? A . n A 1 122 HIS 122 120 ? ? ? A . n A 1 123 HIS 123 121 ? ? ? A . n A 1 124 HIS 124 122 ? ? ? A . n A 1 125 HIS 125 123 ? ? ? A . n A 1 126 HIS 126 124 ? ? ? A . n A 1 127 HIS 127 125 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 201 201 EDO EDO A . C 2 EDO 1 202 202 EDO EDO A . D 3 HOH 1 203 1 HOH HOH A . D 3 HOH 2 204 2 HOH HOH A . D 3 HOH 3 205 3 HOH HOH A . D 3 HOH 4 206 4 HOH HOH A . D 3 HOH 5 207 5 HOH HOH A . D 3 HOH 6 208 6 HOH HOH A . D 3 HOH 7 209 7 HOH HOH A . D 3 HOH 8 210 8 HOH HOH A . D 3 HOH 9 211 9 HOH HOH A . D 3 HOH 10 212 10 HOH HOH A . D 3 HOH 11 213 11 HOH HOH A . D 3 HOH 12 214 12 HOH HOH A . D 3 HOH 13 215 13 HOH HOH A . D 3 HOH 14 216 14 HOH HOH A . D 3 HOH 15 217 15 HOH HOH A . D 3 HOH 16 218 16 HOH HOH A . D 3 HOH 17 219 17 HOH HOH A . D 3 HOH 18 220 19 HOH HOH A . D 3 HOH 19 221 21 HOH HOH A . D 3 HOH 20 222 22 HOH HOH A . D 3 HOH 21 223 23 HOH HOH A . D 3 HOH 22 224 24 HOH HOH A . D 3 HOH 23 225 26 HOH HOH A . D 3 HOH 24 226 27 HOH HOH A . D 3 HOH 25 227 28 HOH HOH A . D 3 HOH 26 228 30 HOH HOH A . D 3 HOH 27 229 31 HOH HOH A . D 3 HOH 28 230 32 HOH HOH A . D 3 HOH 29 231 33 HOH HOH A . D 3 HOH 30 232 34 HOH HOH A . D 3 HOH 31 233 35 HOH HOH A . D 3 HOH 32 234 36 HOH HOH A . D 3 HOH 33 235 37 HOH HOH A . D 3 HOH 34 236 38 HOH HOH A . D 3 HOH 35 237 39 HOH HOH A . D 3 HOH 36 238 40 HOH HOH A . D 3 HOH 37 239 41 HOH HOH A . D 3 HOH 38 240 42 HOH HOH A . D 3 HOH 39 241 43 HOH HOH A . D 3 HOH 40 242 45 HOH HOH A . D 3 HOH 41 243 46 HOH HOH A . D 3 HOH 42 244 48 HOH HOH A . D 3 HOH 43 245 49 HOH HOH A . D 3 HOH 44 246 50 HOH HOH A . D 3 HOH 45 247 51 HOH HOH A . D 3 HOH 46 248 52 HOH HOH A . D 3 HOH 47 249 53 HOH HOH A . D 3 HOH 48 250 54 HOH HOH A . D 3 HOH 49 251 55 HOH HOH A . D 3 HOH 50 252 56 HOH HOH A . D 3 HOH 51 253 57 HOH HOH A . D 3 HOH 52 254 58 HOH HOH A . D 3 HOH 53 255 59 HOH HOH A . D 3 HOH 54 256 60 HOH HOH A . D 3 HOH 55 257 61 HOH HOH A . D 3 HOH 56 258 62 HOH HOH A . D 3 HOH 57 259 63 HOH HOH A . D 3 HOH 58 260 64 HOH HOH A . D 3 HOH 59 261 65 HOH HOH A . D 3 HOH 60 262 68 HOH HOH A . D 3 HOH 61 263 69 HOH HOH A . D 3 HOH 62 264 70 HOH HOH A . D 3 HOH 63 265 71 HOH HOH A . D 3 HOH 64 266 72 HOH HOH A . D 3 HOH 65 267 73 HOH HOH A . D 3 HOH 66 268 75 HOH HOH A . D 3 HOH 67 269 77 HOH HOH A . D 3 HOH 68 270 79 HOH HOH A . D 3 HOH 69 271 81 HOH HOH A . D 3 HOH 70 272 82 HOH HOH A . D 3 HOH 71 273 83 HOH HOH A . D 3 HOH 72 274 85 HOH HOH A . D 3 HOH 73 275 86 HOH HOH A . D 3 HOH 74 276 87 HOH HOH A . D 3 HOH 75 277 88 HOH HOH A . D 3 HOH 76 278 89 HOH HOH A . D 3 HOH 77 279 91 HOH HOH A . D 3 HOH 78 280 93 HOH HOH A . D 3 HOH 79 281 95 HOH HOH A . D 3 HOH 80 282 96 HOH HOH A . D 3 HOH 81 283 97 HOH HOH A . D 3 HOH 82 284 98 HOH HOH A . D 3 HOH 83 285 101 HOH HOH A . D 3 HOH 84 286 102 HOH HOH A . D 3 HOH 85 287 105 HOH HOH A . D 3 HOH 86 288 106 HOH HOH A . D 3 HOH 87 289 109 HOH HOH A . D 3 HOH 88 290 110 HOH HOH A . D 3 HOH 89 291 114 HOH HOH A . D 3 HOH 90 292 117 HOH HOH A . D 3 HOH 91 293 118 HOH HOH A . D 3 HOH 92 294 121 HOH HOH A . D 3 HOH 93 295 124 HOH HOH A . D 3 HOH 94 296 126 HOH HOH A . D 3 HOH 95 297 127 HOH HOH A . D 3 HOH 96 298 128 HOH HOH A . D 3 HOH 97 299 139 HOH HOH A . D 3 HOH 98 300 140 HOH HOH A . D 3 HOH 99 301 142 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 41 A MSE 39 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 74 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-22 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2018-11-14 6 'Structure model' 1 5 2021-02-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' audit_author 3 6 'Structure model' audit_author 4 6 'Structure model' citation_author 5 6 'Structure model' struct_conn 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_audit_author.identifier_ORCID' 11 6 'Structure model' '_audit_author.identifier_ORCID' 12 6 'Structure model' '_citation_author.identifier_ORCID' 13 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 6 'Structure model' '_struct_ref_seq_dif.details' 15 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.820 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 22683 _diffrn_reflns.pdbx_Rmerge_I_obs 0.073 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 0.83 _diffrn_reflns.av_sigmaI_over_netI 8.60 _diffrn_reflns.pdbx_redundancy 6.30 _diffrn_reflns.pdbx_percent_possible_obs 100.00 _diffrn_reflns.number 141817 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.92 50.00 ? ? 0.040 ? 1.787 6.30 99.90 1 3.11 3.92 ? ? 0.054 ? 1.749 6.30 100.00 1 2.72 3.11 ? ? 0.060 ? 0.896 6.40 100.00 1 2.47 2.72 ? ? 0.088 ? 0.674 6.40 100.00 1 2.29 2.47 ? ? 0.099 ? 0.598 6.40 100.00 1 2.16 2.29 ? ? 0.130 ? 0.599 6.40 100.00 1 2.05 2.16 ? ? 0.191 ? 0.545 6.40 100.00 1 1.96 2.05 ? ? 0.251 ? 0.490 6.30 100.00 1 1.89 1.96 ? ? 0.367 ? 0.482 6.20 100.00 1 1.82 1.89 ? ? 0.462 ? 0.441 5.40 99.70 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 CBASS . ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL2Map . ? ? ? ? phasing ? ? ? 7 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 82 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -114.04 _pdbx_validate_torsion.psi 60.58 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -1 ? A MSE 1 2 1 Y 1 A ALA 115 ? A ALA 117 3 1 Y 1 A GLU 116 ? A GLU 118 4 1 Y 1 A TRP 117 ? A TRP 119 5 1 Y 1 A GLU 118 ? A GLU 120 6 1 Y 1 A GLY 119 ? A GLY 121 7 1 Y 1 A HIS 120 ? A HIS 122 8 1 Y 1 A HIS 121 ? A HIS 123 9 1 Y 1 A HIS 122 ? A HIS 124 10 1 Y 1 A HIS 123 ? A HIS 125 11 1 Y 1 A HIS 124 ? A HIS 126 12 1 Y 1 A HIS 125 ? A HIS 127 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #