data_2PYP
#
_entry.id 2PYP
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.399
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2PYP pdb_00002pyp 10.2210/pdb2pyp/pdb
WWPDB D_1000178525 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1998-04-29
2 'Structure model' 1 1 2008-03-25
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2017-11-29
5 'Structure model' 2 0 2024-12-25
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Derived calculations'
4 4 'Structure model' Other
5 4 'Structure model' 'Refinement description'
6 5 'Structure model' Advisory
7 5 'Structure model' 'Atomic model'
8 5 'Structure model' 'Data collection'
9 5 'Structure model' 'Database references'
10 5 'Structure model' 'Derived calculations'
11 5 'Structure model' 'Non-polymer description'
12 5 'Structure model' 'Polymer sequence'
13 5 'Structure model' 'Source and taxonomy'
14 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' pdbx_database_status
2 4 'Structure model' software
3 4 'Structure model' struct_conf
4 4 'Structure model' struct_conf_type
5 5 'Structure model' atom_site
6 5 'Structure model' chem_comp
7 5 'Structure model' chem_comp_atom
8 5 'Structure model' chem_comp_bond
9 5 'Structure model' database_2
10 5 'Structure model' entity
11 5 'Structure model' entity_name_com
12 5 'Structure model' entity_poly
13 5 'Structure model' entity_poly_seq
14 5 'Structure model' entity_src_nat
15 5 'Structure model' pdbx_distant_solvent_atoms
16 5 'Structure model' pdbx_entity_nonpoly
17 5 'Structure model' pdbx_entry_details
18 5 'Structure model' pdbx_modification_feature
19 5 'Structure model' pdbx_nonpoly_scheme
20 5 'Structure model' pdbx_poly_seq_scheme
21 5 'Structure model' pdbx_struct_assembly_gen
22 5 'Structure model' pdbx_struct_mod_residue
23 5 'Structure model' struct_asym
24 5 'Structure model' struct_conn
25 5 'Structure model' struct_ref
26 5 'Structure model' struct_site
27 5 'Structure model' struct_site_gen
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_pdbx_database_status.process_site'
2 4 'Structure model' '_software.name'
3 5 'Structure model' '_atom_site.B_iso_or_equiv'
4 5 'Structure model' '_atom_site.Cartn_x'
5 5 'Structure model' '_atom_site.Cartn_y'
6 5 'Structure model' '_atom_site.Cartn_z'
7 5 'Structure model' '_atom_site.auth_atom_id'
8 5 'Structure model' '_atom_site.auth_comp_id'
9 5 'Structure model' '_atom_site.auth_seq_id'
10 5 'Structure model' '_atom_site.group_PDB'
11 5 'Structure model' '_atom_site.label_alt_id'
12 5 'Structure model' '_atom_site.label_asym_id'
13 5 'Structure model' '_atom_site.label_atom_id'
14 5 'Structure model' '_atom_site.label_comp_id'
15 5 'Structure model' '_atom_site.label_entity_id'
16 5 'Structure model' '_atom_site.label_seq_id'
17 5 'Structure model' '_atom_site.occupancy'
18 5 'Structure model' '_atom_site.type_symbol'
19 5 'Structure model' '_chem_comp.formula'
20 5 'Structure model' '_chem_comp.formula_weight'
21 5 'Structure model' '_chem_comp.id'
22 5 'Structure model' '_chem_comp.mon_nstd_flag'
23 5 'Structure model' '_chem_comp.name'
24 5 'Structure model' '_chem_comp.pdbx_synonyms'
25 5 'Structure model' '_chem_comp.type'
26 5 'Structure model' '_database_2.pdbx_DOI'
27 5 'Structure model' '_database_2.pdbx_database_accession'
28 5 'Structure model' '_entity_poly.nstd_monomer'
29 5 'Structure model' '_entity_poly.pdbx_seq_one_letter_code'
30 5 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'
31 5 'Structure model' '_entity_poly_seq.mon_id'
32 5 'Structure model' '_entity_src_nat.pdbx_beg_seq_num'
33 5 'Structure model' '_entity_src_nat.pdbx_end_seq_num'
34 5 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id'
35 5 'Structure model' '_pdbx_poly_seq_scheme.mon_id'
36 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id'
37 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
38 5 'Structure model' '_struct_ref.db_code'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2PYP
_pdbx_database_status.recvd_initial_deposition_date 1997-02-03
_pdbx_database_status.deposit_site ?
_pdbx_database_status.process_site BNL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Genick, U.K.' 1
'Borgstahl, G.E.O.' 2
'Ng, K.' 3
'Ren, Z.' 4
'Pradervand, C.' 5
'Burke, P.' 6
'Srajer, V.' 7
'Teng, T.' 8
'Schildkamp, W.' 9
'Mcree, D.E.' 10
'Moffat, K.' 11
'Getzoff, E.D.' 12
#
_citation.id primary
_citation.title 'Structure of a protein photocycle intermediate by millisecond time-resolved crystallography.'
_citation.journal_abbrev Science
_citation.journal_volume 275
_citation.page_first 1471
_citation.page_last 1475
_citation.year 1997
_citation.journal_id_ASTM SCIEAS
_citation.country US
_citation.journal_id_ISSN 0036-8075
_citation.journal_id_CSD 0038
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 9045611
_citation.pdbx_database_id_DOI 10.1126/science.275.5305.1471
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Genick, U.K.' 1 ?
primary 'Borgstahl, G.E.' 2 ?
primary 'Ng, K.' 3 ?
primary 'Ren, Z.' 4 ?
primary 'Pradervand, C.' 5 ?
primary 'Burke, P.M.' 6 ?
primary 'Srajer, V.' 7 ?
primary 'Teng, T.Y.' 8 ?
primary 'Schildkamp, W.' 9 ?
primary 'McRee, D.E.' 10 ?
primary 'Moffat, K.' 11 ?
primary 'Getzoff, E.D.' 12 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'Photoactive yellow protein' 14034.718 1 ? ? ? ?
2 water nat water 18.015 56 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name PYP
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;MEHVAFGSEDIENTLAKMDDGQLDGLAFGAIQLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAP(60F)TDSPEFY
GKFKEGVASGNLNTMFEYTFDYQMTPTKVKVHMKKALSGDSYWVFVKRV
;
_entity_poly.pdbx_seq_one_letter_code_can
;MEHVAFGSEDIENTLAKMDDGQLDGLAFGAIQLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPXTDSPEFYGKFK
EGVASGNLNTMFEYTFDYQMTPTKVKVHMKKALSGDSYWVFVKRV
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 GLU n
1 3 HIS n
1 4 VAL n
1 5 ALA n
1 6 PHE n
1 7 GLY n
1 8 SER n
1 9 GLU n
1 10 ASP n
1 11 ILE n
1 12 GLU n
1 13 ASN n
1 14 THR n
1 15 LEU n
1 16 ALA n
1 17 LYS n
1 18 MET n
1 19 ASP n
1 20 ASP n
1 21 GLY n
1 22 GLN n
1 23 LEU n
1 24 ASP n
1 25 GLY n
1 26 LEU n
1 27 ALA n
1 28 PHE n
1 29 GLY n
1 30 ALA n
1 31 ILE n
1 32 GLN n
1 33 LEU n
1 34 ASP n
1 35 GLY n
1 36 ASP n
1 37 GLY n
1 38 ASN n
1 39 ILE n
1 40 LEU n
1 41 GLN n
1 42 TYR n
1 43 ASN n
1 44 ALA n
1 45 ALA n
1 46 GLU n
1 47 GLY n
1 48 ASP n
1 49 ILE n
1 50 THR n
1 51 GLY n
1 52 ARG n
1 53 ASP n
1 54 PRO n
1 55 LYS n
1 56 GLN n
1 57 VAL n
1 58 ILE n
1 59 GLY n
1 60 LYS n
1 61 ASN n
1 62 PHE n
1 63 PHE n
1 64 LYS n
1 65 ASP n
1 66 VAL n
1 67 ALA n
1 68 PRO n
1 69 60F n
1 70 THR n
1 71 ASP n
1 72 SER n
1 73 PRO n
1 74 GLU n
1 75 PHE n
1 76 TYR n
1 77 GLY n
1 78 LYS n
1 79 PHE n
1 80 LYS n
1 81 GLU n
1 82 GLY n
1 83 VAL n
1 84 ALA n
1 85 SER n
1 86 GLY n
1 87 ASN n
1 88 LEU n
1 89 ASN n
1 90 THR n
1 91 MET n
1 92 PHE n
1 93 GLU n
1 94 TYR n
1 95 THR n
1 96 PHE n
1 97 ASP n
1 98 TYR n
1 99 GLN n
1 100 MET n
1 101 THR n
1 102 PRO n
1 103 THR n
1 104 LYS n
1 105 VAL n
1 106 LYS n
1 107 VAL n
1 108 HIS n
1 109 MET n
1 110 LYS n
1 111 LYS n
1 112 ALA n
1 113 LEU n
1 114 SER n
1 115 GLY n
1 116 ASP n
1 117 SER n
1 118 TYR n
1 119 TRP n
1 120 VAL n
1 121 PHE n
1 122 VAL n
1 123 LYS n
1 124 ARG n
1 125 VAL n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num 1
_entity_src_nat.pdbx_end_seq_num 125
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Halorhodospira halophila'
_entity_src_nat.pdbx_ncbi_taxonomy_id 1053
_entity_src_nat.genus Halorhodospira
_entity_src_nat.species ?
_entity_src_nat.strain BN9626
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
60F 'L-peptide linking' n '(2~{R})-2-azanyl-3-[(~{E})-3-(4-hydroxyphenyl)prop-2-enoyl]sulfanyl-propanoic acid' ? 'C12 H13 N O4 S'
267.301
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2'
89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1'
175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3'
132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4'
133.103
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3'
146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4'
147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2'
75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1'
156.162
HOH non-polymer . WATER ? 'H2 O'
18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2'
131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2'
131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1'
147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S'
149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2'
165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2'
115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3'
105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3'
119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2'
204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3'
181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2'
117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 1 1 MET MET A . n
A 1 2 GLU 2 2 2 GLU GLU A . n
A 1 3 HIS 3 3 3 HIS HIS A . n
A 1 4 VAL 4 4 4 VAL VAL A . n
A 1 5 ALA 5 5 5 ALA ALA A . n
A 1 6 PHE 6 6 6 PHE PHE A . n
A 1 7 GLY 7 7 7 GLY GLY A . n
A 1 8 SER 8 8 8 SER SER A . n
A 1 9 GLU 9 9 9 GLU GLU A . n
A 1 10 ASP 10 10 10 ASP ASP A . n
A 1 11 ILE 11 11 11 ILE ILE A . n
A 1 12 GLU 12 12 12 GLU GLU A . n
A 1 13 ASN 13 13 13 ASN ASN A . n
A 1 14 THR 14 14 14 THR THR A . n
A 1 15 LEU 15 15 15 LEU LEU A . n
A 1 16 ALA 16 16 16 ALA ALA A . n
A 1 17 LYS 17 17 17 LYS LYS A . n
A 1 18 MET 18 18 18 MET MET A . n
A 1 19 ASP 19 19 19 ASP ASP A . n
A 1 20 ASP 20 20 20 ASP ASP A . n
A 1 21 GLY 21 21 21 GLY GLY A . n
A 1 22 GLN 22 22 22 GLN GLN A . n
A 1 23 LEU 23 23 23 LEU LEU A . n
A 1 24 ASP 24 24 24 ASP ASP A . n
A 1 25 GLY 25 25 25 GLY GLY A . n
A 1 26 LEU 26 26 26 LEU LEU A . n
A 1 27 ALA 27 27 27 ALA ALA A . n
A 1 28 PHE 28 28 28 PHE PHE A . n
A 1 29 GLY 29 29 29 GLY GLY A . n
A 1 30 ALA 30 30 30 ALA ALA A . n
A 1 31 ILE 31 31 31 ILE ILE A . n
A 1 32 GLN 32 32 32 GLN GLN A . n
A 1 33 LEU 33 33 33 LEU LEU A . n
A 1 34 ASP 34 34 34 ASP ASP A . n
A 1 35 GLY 35 35 35 GLY GLY A . n
A 1 36 ASP 36 36 36 ASP ASP A . n
A 1 37 GLY 37 37 37 GLY GLY A . n
A 1 38 ASN 38 38 38 ASN ASN A . n
A 1 39 ILE 39 39 39 ILE ILE A . n
A 1 40 LEU 40 40 40 LEU LEU A . n
A 1 41 GLN 41 41 41 GLN GLN A . n
A 1 42 TYR 42 42 42 TYR TYR A . n
A 1 43 ASN 43 43 43 ASN ASN A . n
A 1 44 ALA 44 44 44 ALA ALA A . n
A 1 45 ALA 45 45 45 ALA ALA A . n
A 1 46 GLU 46 46 46 GLU GLU A . n
A 1 47 GLY 47 47 47 GLY GLY A . n
A 1 48 ASP 48 48 48 ASP ASP A . n
A 1 49 ILE 49 49 49 ILE ILE A . n
A 1 50 THR 50 50 50 THR THR A . n
A 1 51 GLY 51 51 51 GLY GLY A . n
A 1 52 ARG 52 52 52 ARG ARG A . n
A 1 53 ASP 53 53 53 ASP ASP A . n
A 1 54 PRO 54 54 54 PRO PRO A . n
A 1 55 LYS 55 55 55 LYS LYS A . n
A 1 56 GLN 56 56 56 GLN GLN A . n
A 1 57 VAL 57 57 57 VAL VAL A . n
A 1 58 ILE 58 58 58 ILE ILE A . n
A 1 59 GLY 59 59 59 GLY GLY A . n
A 1 60 LYS 60 60 60 LYS LYS A . n
A 1 61 ASN 61 61 61 ASN ASN A . n
A 1 62 PHE 62 62 62 PHE PHE A . n
A 1 63 PHE 63 63 63 PHE PHE A . n
A 1 64 LYS 64 64 64 LYS LYS A . n
A 1 65 ASP 65 65 65 ASP ASP A . n
A 1 66 VAL 66 66 66 VAL VAL A . n
A 1 67 ALA 67 67 67 ALA ALA A . n
A 1 68 PRO 68 68 68 PRO PRO A . n
A 1 69 60F 69 69 69 60F HC4 A . n
A 1 70 THR 70 70 70 THR THR A . n
A 1 71 ASP 71 71 71 ASP ASP A . n
A 1 72 SER 72 72 72 SER SER A . n
A 1 73 PRO 73 73 73 PRO PRO A . n
A 1 74 GLU 74 74 74 GLU GLU A . n
A 1 75 PHE 75 75 75 PHE PHE A . n
A 1 76 TYR 76 76 76 TYR TYR A . n
A 1 77 GLY 77 77 77 GLY GLY A . n
A 1 78 LYS 78 78 78 LYS LYS A . n
A 1 79 PHE 79 79 79 PHE PHE A . n
A 1 80 LYS 80 80 80 LYS LYS A . n
A 1 81 GLU 81 81 81 GLU GLU A . n
A 1 82 GLY 82 82 82 GLY GLY A . n
A 1 83 VAL 83 83 83 VAL VAL A . n
A 1 84 ALA 84 84 84 ALA ALA A . n
A 1 85 SER 85 85 85 SER SER A . n
A 1 86 GLY 86 86 86 GLY GLY A . n
A 1 87 ASN 87 87 87 ASN ASN A . n
A 1 88 LEU 88 88 88 LEU LEU A . n
A 1 89 ASN 89 89 89 ASN ASN A . n
A 1 90 THR 90 90 90 THR THR A . n
A 1 91 MET 91 91 91 MET MET A . n
A 1 92 PHE 92 92 92 PHE PHE A . n
A 1 93 GLU 93 93 93 GLU GLU A . n
A 1 94 TYR 94 94 94 TYR TYR A . n
A 1 95 THR 95 95 95 THR THR A . n
A 1 96 PHE 96 96 96 PHE PHE A . n
A 1 97 ASP 97 97 97 ASP ASP A . n
A 1 98 TYR 98 98 98 TYR TYR A . n
A 1 99 GLN 99 99 99 GLN GLN A . n
A 1 100 MET 100 100 100 MET MET A . n
A 1 101 THR 101 101 101 THR THR A . n
A 1 102 PRO 102 102 102 PRO PRO A . n
A 1 103 THR 103 103 103 THR THR A . n
A 1 104 LYS 104 104 104 LYS LYS A . n
A 1 105 VAL 105 105 105 VAL VAL A . n
A 1 106 LYS 106 106 106 LYS LYS A . n
A 1 107 VAL 107 107 107 VAL VAL A . n
A 1 108 HIS 108 108 108 HIS HIS A . n
A 1 109 MET 109 109 109 MET MET A . n
A 1 110 LYS 110 110 110 LYS LYS A . n
A 1 111 LYS 111 111 111 LYS LYS A . n
A 1 112 ALA 112 112 112 ALA ALA A . n
A 1 113 LEU 113 113 113 LEU LEU A . n
A 1 114 SER 114 114 114 SER SER A . n
A 1 115 GLY 115 115 115 GLY GLY A . n
A 1 116 ASP 116 116 116 ASP ASP A . n
A 1 117 SER 117 117 117 SER SER A . n
A 1 118 TYR 118 118 118 TYR TYR A . n
A 1 119 TRP 119 119 119 TRP TRP A . n
A 1 120 VAL 120 120 120 VAL VAL A . n
A 1 121 PHE 121 121 121 PHE PHE A . n
A 1 122 VAL 122 122 122 VAL VAL A . n
A 1 123 LYS 123 123 123 LYS LYS A . n
A 1 124 ARG 124 124 124 ARG ARG A . n
A 1 125 VAL 125 125 125 VAL VAL A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 200 200 HOH HOH A .
B 2 HOH 2 201 201 HOH HOH A .
B 2 HOH 3 202 202 HOH HOH A .
B 2 HOH 4 203 203 HOH HOH A .
B 2 HOH 5 204 204 HOH HOH A .
B 2 HOH 6 206 206 HOH HOH A .
B 2 HOH 7 207 207 HOH HOH A .
B 2 HOH 8 208 208 HOH HOH A .
B 2 HOH 9 209 209 HOH HOH A .
B 2 HOH 10 210 210 HOH HOH A .
B 2 HOH 11 211 211 HOH HOH A .
B 2 HOH 12 212 212 HOH HOH A .
B 2 HOH 13 213 213 HOH HOH A .
B 2 HOH 14 214 214 HOH HOH A .
B 2 HOH 15 217 217 HOH HOH A .
B 2 HOH 16 218 218 HOH HOH A .
B 2 HOH 17 220 220 HOH HOH A .
B 2 HOH 18 221 221 HOH HOH A .
B 2 HOH 19 222 222 HOH HOH A .
B 2 HOH 20 223 223 HOH HOH A .
B 2 HOH 21 224 224 HOH HOH A .
B 2 HOH 22 225 225 HOH HOH A .
B 2 HOH 23 226 226 HOH HOH A .
B 2 HOH 24 227 227 HOH HOH A .
B 2 HOH 25 229 229 HOH HOH A .
B 2 HOH 26 231 231 HOH HOH A .
B 2 HOH 27 232 232 HOH HOH A .
B 2 HOH 28 233 233 HOH HOH A .
B 2 HOH 29 234 234 HOH HOH A .
B 2 HOH 30 235 235 HOH HOH A .
B 2 HOH 31 236 236 HOH HOH A .
B 2 HOH 32 237 237 HOH HOH A .
B 2 HOH 33 240 240 HOH HOH A .
B 2 HOH 34 241 241 HOH HOH A .
B 2 HOH 35 244 244 HOH HOH A .
B 2 HOH 36 245 245 HOH HOH A .
B 2 HOH 37 248 248 HOH HOH A .
B 2 HOH 38 249 249 HOH HOH A .
B 2 HOH 39 250 250 HOH HOH A .
B 2 HOH 40 251 251 HOH HOH A .
B 2 HOH 41 253 253 HOH HOH A .
B 2 HOH 42 254 254 HOH HOH A .
B 2 HOH 43 257 257 HOH HOH A .
B 2 HOH 44 258 258 HOH HOH A .
B 2 HOH 45 260 260 HOH HOH A .
B 2 HOH 46 261 261 HOH HOH A .
B 2 HOH 47 262 262 HOH HOH A .
B 2 HOH 48 264 264 HOH HOH A .
B 2 HOH 49 274 274 HOH HOH A .
B 2 HOH 50 277 277 HOH HOH A .
B 2 HOH 51 278 278 HOH HOH A .
B 2 HOH 52 279 279 HOH HOH A .
B 2 HOH 53 282 282 HOH HOH A .
B 2 HOH 54 284 284 HOH HOH A .
B 2 HOH 55 286 286 HOH HOH A .
B 2 HOH 56 290 290 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
X-PLOR 'model building' 3.1 ? 1
X-PLOR refinement 3.1 ? 2
LaueView 'data reduction' . ? 3
LaueView 'data scaling' . ? 4
X-PLOR phasing 3.1 ? 5
#
_cell.entry_id 2PYP
_cell.length_a 66.900
_cell.length_b 66.900
_cell.length_c 40.800
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 2PYP
_symmetry.space_group_name_H-M 'P 63'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 173
#
_exptl.entry_id 2PYP
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 1.88
_exptl_crystal.density_percent_sol 35.
_exptl_crystal.description 'THE MODEL OF THE GROUND STATE STRUCTURE WAS USED'
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 4.8
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details 'pH 4.8'
#
_diffrn.id 1
_diffrn.ambient_temp 261
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type FUJI
_diffrn_detector.pdbx_collection_date 1993-06
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l L
_diffrn_radiation.monochromator 'ALUMINUM FOIL 150 MICRON'
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 0.7 1.0
2 2.0 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'NSLS BEAMLINE X26C'
_diffrn_source.pdbx_synchrotron_site NSLS
_diffrn_source.pdbx_synchrotron_beamline X26C
_diffrn_source.pdbx_wavelength 0.7
_diffrn_source.pdbx_wavelength_list '0.7, 2.0'
#
_reflns.entry_id 2PYP
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 10.0
_reflns.d_resolution_high 1.9
_reflns.number_obs 10354
_reflns.number_all ?
_reflns.percent_possible_obs 92.3
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 5.5
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.9
_reflns_shell.d_res_low 2.1
_reflns_shell.percent_possible_all 86.0
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 2PYP
_refine.ls_number_reflns_obs 7392
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 3.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 10.0
_refine.ls_d_res_high 1.9
_refine.ls_percent_reflns_obs 89.3
_refine.ls_R_factor_obs 0.2040000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.2040000
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1072
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 11
_refine_hist.number_atoms_solvent 56
_refine_hist.number_atoms_total 1139
_refine_hist.d_res_high 1.9
_refine_hist.d_res_low 10.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 1.605 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 8
_refine_ls_shell.d_res_high 1.9
_refine_ls_shell.d_res_low 1.99
_refine_ls_shell.number_reflns_R_work 765
_refine_ls_shell.R_factor_R_work 0.2800000
_refine_ls_shell.percent_reflns_obs 74.34
_refine_ls_shell.R_factor_R_free ?
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 PARHCSDX.PRO TOPH19.PEP 'X-RAY DIFFRACTION'
2 ? ? 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 2PYP
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 2PYP
_struct.title 'PHOTOACTIVE YELLOW PROTEIN, PHOTOSTATIONARY STATE, 50% GROUND STATE, 50% BLEACHED'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2PYP
_struct_keywords.pdbx_keywords PHOTORECEPTOR
_struct_keywords.text 'PHOTORECEPTOR, CHROMOPHORE, LIGHT SENSOR FOR PHOTOTAXIS'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code PYP_HALHA
_struct_ref.pdbx_db_accession P16113
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;MEHVAFGSEDIENTLAKMDDGQLDGLAFGAIQLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFK
EGVASGNLNTMFEYTFDYQMTPTKVKVHMKKALSGDSYWVFVKRV
;
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 2PYP
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 125
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P16113
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 125
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 125
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 A-1 ILE A 11 ? LEU A 15 ? ILE A 11 LEU A 15 1 ? 5
HELX_P HELX_P2 A-2 ASP A 19 ? LEU A 23 ? ASP A 19 LEU A 23 1 ? 5
HELX_P HELX_P3 A-3 ASN A 43 ? THR A 50 ? ASN A 43 THR A 50 1 ? 8
HELX_P HELX_P4 A-4 ASP A 53 ? VAL A 57 ? ASP A 53 VAL A 57 1 ? 5
HELX_P HELX_P5 PI ASN A 61 ? ALA A 67 ? ASN A 61 ALA A 67 3 ? 7
HELX_P HELX_P6 A-5 PHE A 75 ? GLY A 86 ? PHE A 75 GLY A 86 1 ? 12
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A PRO 68 C ? ? ? 1_555 A 60F 69 N A ? A PRO 68 A 60F 69 1_555 ? ? ? ? ? ? ? 1.333 ? ?
covale2 covale both ? A PRO 68 C ? ? ? 1_555 A 60F 69 N B ? A PRO 68 A 60F 69 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale3 covale both ? A 60F 69 C A ? ? 1_555 A THR 70 N ? ? A 60F 69 A THR 70 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale4 covale both ? A 60F 69 C B ? ? 1_555 A THR 70 N ? ? A 60F 69 A THR 70 1_555 ? ? ? ? ? ? ? 1.335 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 60F A 69 A . . . . 60F A 69 ? 1_555 . . . . . . . CYS 1 60F None Chromophore/chromophore-like
2 60F A 69 B . . . . 60F A 69 ? 1_555 . . . . . . . CYS 1 60F None Chromophore/chromophore-like
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
B-1 ? 6 ?
B-2 ? 6 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
B-1 1 2 ? anti-parallel
B-1 2 3 ? anti-parallel
B-1 3 4 ? anti-parallel
B-1 4 5 ? anti-parallel
B-1 5 6 ? anti-parallel
B-2 1 2 ? anti-parallel
B-2 2 3 ? anti-parallel
B-2 3 4 ? anti-parallel
B-2 4 5 ? anti-parallel
B-2 5 6 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
B-1 1 LYS A 60 ? PHE A 62 ? LYS A 60 PHE A 62
B-1 2 GLY A 37 ? GLN A 41 ? GLY A 37 GLN A 41
B-1 3 GLY A 29 ? ASP A 34 ? GLY A 29 ASP A 34
B-1 4 SER A 117 ? VAL A 125 ? SER A 117 VAL A 125
B-1 5 THR A 103 ? ALA A 112 ? THR A 103 ALA A 112
B-1 6 LEU A 88 ? PHE A 96 ? LEU A 88 PHE A 96
B-2 1 LYS A 60 ? PHE A 62 ? LYS A 60 PHE A 62
B-2 2 GLY A 37 ? GLN A 41 ? GLY A 37 GLN A 41
B-2 3 GLY A 29 ? ASP A 34 ? GLY A 29 ASP A 34
B-2 4 SER A 117 ? VAL A 125 ? SER A 117 VAL A 125
B-2 5 THR A 103 ? ALA A 112 ? THR A 103 ALA A 112
B-2 6 LEU A 88 ? PHE A 96 ? LEU A 88 PHE A 96
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
B-1 1 2 N PHE A 62 ? N PHE A 62 O GLY A 37 ? O GLY A 37
B-1 2 3 N LEU A 40 ? N LEU A 40 O GLN A 32 ? O GLN A 32
B-1 3 4 N ILE A 31 ? N ILE A 31 O VAL A 120 ? O VAL A 120
B-1 4 5 N PHE A 121 ? N PHE A 121 O HIS A 108 ? O HIS A 108
B-1 5 6 N MET A 109 ? N MET A 109 O THR A 90 ? O THR A 90
B-2 1 2 N PHE A 62 ? N PHE A 62 O GLY A 37 ? O GLY A 37
B-2 2 3 N LEU A 40 ? N LEU A 40 O GLN A 32 ? O GLN A 32
B-2 3 4 N ILE A 31 ? N ILE A 31 O VAL A 120 ? O VAL A 120
B-2 4 5 N PHE A 121 ? N PHE A 121 O HIS A 108 ? O HIS A 108
B-2 5 6 N MET A 109 ? N MET A 109 O THR A 90 ? O THR A 90
#
_pdbx_entry_details.entry_id 2PYP
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 PHE A 75 ? ? -130.59 -74.27
2 1 ASN A 89 ? ? -163.00 94.56
3 1 ASP A 97 ? ? -141.79 18.54
4 1 ASP A 116 ? ? -107.86 58.81
#
_pdbx_struct_mod_residue.id 1
_pdbx_struct_mod_residue.label_asym_id A
_pdbx_struct_mod_residue.label_comp_id 60F
_pdbx_struct_mod_residue.label_seq_id 69
_pdbx_struct_mod_residue.auth_asym_id A
_pdbx_struct_mod_residue.auth_comp_id 60F
_pdbx_struct_mod_residue.auth_seq_id 69
_pdbx_struct_mod_residue.PDB_ins_code ?
_pdbx_struct_mod_residue.parent_comp_id CYS
_pdbx_struct_mod_residue.details 'modified residue'
#
_pdbx_distant_solvent_atoms.id 1
_pdbx_distant_solvent_atoms.PDB_model_num 1
_pdbx_distant_solvent_atoms.auth_atom_id O
_pdbx_distant_solvent_atoms.label_alt_id ?
_pdbx_distant_solvent_atoms.auth_asym_id A
_pdbx_distant_solvent_atoms.auth_comp_id HOH
_pdbx_distant_solvent_atoms.auth_seq_id 290
_pdbx_distant_solvent_atoms.PDB_ins_code ?
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 10.61
_pdbx_distant_solvent_atoms.neighbor_ligand_distance .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
60F C1 C N N 1
60F C2 C N N 2
60F C3 C N N 3
60F O1 O N N 4
60F "C1'" C Y N 5
60F "C6'" C Y N 6
60F "C5'" C Y N 7
60F "C4'" C Y N 8
60F "O4'" O N N 9
60F "C3'" C Y N 10
60F "C2'" C Y N 11
60F N N N N 12
60F CA C N R 13
60F CB C N N 14
60F SG S N N 15
60F C C N N 16
60F O O N N 17
60F H1 H N N 18
60F H10 H N N 19
60F H3 H N N 20
60F H4 H N N 21
60F H5 H N N 22
60F H6 H N N 23
60F H7 H N N 24
60F H H N N 25
60F H2 H N N 26
60F HA H N N 27
60F H12 H N N 28
60F H13 H N N 29
60F OXT O N N 30
60F HXT H N N 31
ALA N N N N 32
ALA CA C N S 33
ALA C C N N 34
ALA O O N N 35
ALA CB C N N 36
ALA OXT O N N 37
ALA H H N N 38
ALA H2 H N N 39
ALA HA H N N 40
ALA HB1 H N N 41
ALA HB2 H N N 42
ALA HB3 H N N 43
ALA HXT H N N 44
ARG N N N N 45
ARG CA C N S 46
ARG C C N N 47
ARG O O N N 48
ARG CB C N N 49
ARG CG C N N 50
ARG CD C N N 51
ARG NE N N N 52
ARG CZ C N N 53
ARG NH1 N N N 54
ARG NH2 N N N 55
ARG OXT O N N 56
ARG H H N N 57
ARG H2 H N N 58
ARG HA H N N 59
ARG HB2 H N N 60
ARG HB3 H N N 61
ARG HG2 H N N 62
ARG HG3 H N N 63
ARG HD2 H N N 64
ARG HD3 H N N 65
ARG HE H N N 66
ARG HH11 H N N 67
ARG HH12 H N N 68
ARG HH21 H N N 69
ARG HH22 H N N 70
ARG HXT H N N 71
ASN N N N N 72
ASN CA C N S 73
ASN C C N N 74
ASN O O N N 75
ASN CB C N N 76
ASN CG C N N 77
ASN OD1 O N N 78
ASN ND2 N N N 79
ASN OXT O N N 80
ASN H H N N 81
ASN H2 H N N 82
ASN HA H N N 83
ASN HB2 H N N 84
ASN HB3 H N N 85
ASN HD21 H N N 86
ASN HD22 H N N 87
ASN HXT H N N 88
ASP N N N N 89
ASP CA C N S 90
ASP C C N N 91
ASP O O N N 92
ASP CB C N N 93
ASP CG C N N 94
ASP OD1 O N N 95
ASP OD2 O N N 96
ASP OXT O N N 97
ASP H H N N 98
ASP H2 H N N 99
ASP HA H N N 100
ASP HB2 H N N 101
ASP HB3 H N N 102
ASP HD2 H N N 103
ASP HXT H N N 104
GLN N N N N 105
GLN CA C N S 106
GLN C C N N 107
GLN O O N N 108
GLN CB C N N 109
GLN CG C N N 110
GLN CD C N N 111
GLN OE1 O N N 112
GLN NE2 N N N 113
GLN OXT O N N 114
GLN H H N N 115
GLN H2 H N N 116
GLN HA H N N 117
GLN HB2 H N N 118
GLN HB3 H N N 119
GLN HG2 H N N 120
GLN HG3 H N N 121
GLN HE21 H N N 122
GLN HE22 H N N 123
GLN HXT H N N 124
GLU N N N N 125
GLU CA C N S 126
GLU C C N N 127
GLU O O N N 128
GLU CB C N N 129
GLU CG C N N 130
GLU CD C N N 131
GLU OE1 O N N 132
GLU OE2 O N N 133
GLU OXT O N N 134
GLU H H N N 135
GLU H2 H N N 136
GLU HA H N N 137
GLU HB2 H N N 138
GLU HB3 H N N 139
GLU HG2 H N N 140
GLU HG3 H N N 141
GLU HE2 H N N 142
GLU HXT H N N 143
GLY N N N N 144
GLY CA C N N 145
GLY C C N N 146
GLY O O N N 147
GLY OXT O N N 148
GLY H H N N 149
GLY H2 H N N 150
GLY HA2 H N N 151
GLY HA3 H N N 152
GLY HXT H N N 153
HIS N N N N 154
HIS CA C N S 155
HIS C C N N 156
HIS O O N N 157
HIS CB C N N 158
HIS CG C Y N 159
HIS ND1 N Y N 160
HIS CD2 C Y N 161
HIS CE1 C Y N 162
HIS NE2 N Y N 163
HIS OXT O N N 164
HIS H H N N 165
HIS H2 H N N 166
HIS HA H N N 167
HIS HB2 H N N 168
HIS HB3 H N N 169
HIS HD1 H N N 170
HIS HD2 H N N 171
HIS HE1 H N N 172
HIS HE2 H N N 173
HIS HXT H N N 174
HOH O O N N 175
HOH H1 H N N 176
HOH H2 H N N 177
ILE N N N N 178
ILE CA C N S 179
ILE C C N N 180
ILE O O N N 181
ILE CB C N S 182
ILE CG1 C N N 183
ILE CG2 C N N 184
ILE CD1 C N N 185
ILE OXT O N N 186
ILE H H N N 187
ILE H2 H N N 188
ILE HA H N N 189
ILE HB H N N 190
ILE HG12 H N N 191
ILE HG13 H N N 192
ILE HG21 H N N 193
ILE HG22 H N N 194
ILE HG23 H N N 195
ILE HD11 H N N 196
ILE HD12 H N N 197
ILE HD13 H N N 198
ILE HXT H N N 199
LEU N N N N 200
LEU CA C N S 201
LEU C C N N 202
LEU O O N N 203
LEU CB C N N 204
LEU CG C N N 205
LEU CD1 C N N 206
LEU CD2 C N N 207
LEU OXT O N N 208
LEU H H N N 209
LEU H2 H N N 210
LEU HA H N N 211
LEU HB2 H N N 212
LEU HB3 H N N 213
LEU HG H N N 214
LEU HD11 H N N 215
LEU HD12 H N N 216
LEU HD13 H N N 217
LEU HD21 H N N 218
LEU HD22 H N N 219
LEU HD23 H N N 220
LEU HXT H N N 221
LYS N N N N 222
LYS CA C N S 223
LYS C C N N 224
LYS O O N N 225
LYS CB C N N 226
LYS CG C N N 227
LYS CD C N N 228
LYS CE C N N 229
LYS NZ N N N 230
LYS OXT O N N 231
LYS H H N N 232
LYS H2 H N N 233
LYS HA H N N 234
LYS HB2 H N N 235
LYS HB3 H N N 236
LYS HG2 H N N 237
LYS HG3 H N N 238
LYS HD2 H N N 239
LYS HD3 H N N 240
LYS HE2 H N N 241
LYS HE3 H N N 242
LYS HZ1 H N N 243
LYS HZ2 H N N 244
LYS HZ3 H N N 245
LYS HXT H N N 246
MET N N N N 247
MET CA C N S 248
MET C C N N 249
MET O O N N 250
MET CB C N N 251
MET CG C N N 252
MET SD S N N 253
MET CE C N N 254
MET OXT O N N 255
MET H H N N 256
MET H2 H N N 257
MET HA H N N 258
MET HB2 H N N 259
MET HB3 H N N 260
MET HG2 H N N 261
MET HG3 H N N 262
MET HE1 H N N 263
MET HE2 H N N 264
MET HE3 H N N 265
MET HXT H N N 266
PHE N N N N 267
PHE CA C N S 268
PHE C C N N 269
PHE O O N N 270
PHE CB C N N 271
PHE CG C Y N 272
PHE CD1 C Y N 273
PHE CD2 C Y N 274
PHE CE1 C Y N 275
PHE CE2 C Y N 276
PHE CZ C Y N 277
PHE OXT O N N 278
PHE H H N N 279
PHE H2 H N N 280
PHE HA H N N 281
PHE HB2 H N N 282
PHE HB3 H N N 283
PHE HD1 H N N 284
PHE HD2 H N N 285
PHE HE1 H N N 286
PHE HE2 H N N 287
PHE HZ H N N 288
PHE HXT H N N 289
PRO N N N N 290
PRO CA C N S 291
PRO C C N N 292
PRO O O N N 293
PRO CB C N N 294
PRO CG C N N 295
PRO CD C N N 296
PRO OXT O N N 297
PRO H H N N 298
PRO HA H N N 299
PRO HB2 H N N 300
PRO HB3 H N N 301
PRO HG2 H N N 302
PRO HG3 H N N 303
PRO HD2 H N N 304
PRO HD3 H N N 305
PRO HXT H N N 306
SER N N N N 307
SER CA C N S 308
SER C C N N 309
SER O O N N 310
SER CB C N N 311
SER OG O N N 312
SER OXT O N N 313
SER H H N N 314
SER H2 H N N 315
SER HA H N N 316
SER HB2 H N N 317
SER HB3 H N N 318
SER HG H N N 319
SER HXT H N N 320
THR N N N N 321
THR CA C N S 322
THR C C N N 323
THR O O N N 324
THR CB C N R 325
THR OG1 O N N 326
THR CG2 C N N 327
THR OXT O N N 328
THR H H N N 329
THR H2 H N N 330
THR HA H N N 331
THR HB H N N 332
THR HG1 H N N 333
THR HG21 H N N 334
THR HG22 H N N 335
THR HG23 H N N 336
THR HXT H N N 337
TRP N N N N 338
TRP CA C N S 339
TRP C C N N 340
TRP O O N N 341
TRP CB C N N 342
TRP CG C Y N 343
TRP CD1 C Y N 344
TRP CD2 C Y N 345
TRP NE1 N Y N 346
TRP CE2 C Y N 347
TRP CE3 C Y N 348
TRP CZ2 C Y N 349
TRP CZ3 C Y N 350
TRP CH2 C Y N 351
TRP OXT O N N 352
TRP H H N N 353
TRP H2 H N N 354
TRP HA H N N 355
TRP HB2 H N N 356
TRP HB3 H N N 357
TRP HD1 H N N 358
TRP HE1 H N N 359
TRP HE3 H N N 360
TRP HZ2 H N N 361
TRP HZ3 H N N 362
TRP HH2 H N N 363
TRP HXT H N N 364
TYR N N N N 365
TYR CA C N S 366
TYR C C N N 367
TYR O O N N 368
TYR CB C N N 369
TYR CG C Y N 370
TYR CD1 C Y N 371
TYR CD2 C Y N 372
TYR CE1 C Y N 373
TYR CE2 C Y N 374
TYR CZ C Y N 375
TYR OH O N N 376
TYR OXT O N N 377
TYR H H N N 378
TYR H2 H N N 379
TYR HA H N N 380
TYR HB2 H N N 381
TYR HB3 H N N 382
TYR HD1 H N N 383
TYR HD2 H N N 384
TYR HE1 H N N 385
TYR HE2 H N N 386
TYR HH H N N 387
TYR HXT H N N 388
VAL N N N N 389
VAL CA C N S 390
VAL C C N N 391
VAL O O N N 392
VAL CB C N N 393
VAL CG1 C N N 394
VAL CG2 C N N 395
VAL OXT O N N 396
VAL H H N N 397
VAL H2 H N N 398
VAL HA H N N 399
VAL HB H N N 400
VAL HG11 H N N 401
VAL HG12 H N N 402
VAL HG13 H N N 403
VAL HG21 H N N 404
VAL HG22 H N N 405
VAL HG23 H N N 406
VAL HXT H N N 407
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
60F N CA sing N N 1
60F O1 C1 doub N N 2
60F CA CB sing N N 3
60F CA C sing N N 4
60F CB SG sing N N 5
60F "C2'" "C3'" doub Y N 6
60F "C2'" "C1'" sing Y N 7
60F C1 C2 sing N N 8
60F C1 SG sing N N 9
60F C3 C2 doub N E 10
60F C3 "C1'" sing N N 11
60F "C3'" "C4'" sing Y N 12
60F C O doub N N 13
60F "C1'" "C6'" doub Y N 14
60F "C4'" "O4'" sing N N 15
60F "C4'" "C5'" doub Y N 16
60F "C6'" "C5'" sing Y N 17
60F C2 H1 sing N N 18
60F C3 H10 sing N N 19
60F "C6'" H3 sing N N 20
60F "C5'" H4 sing N N 21
60F "O4'" H5 sing N N 22
60F "C3'" H6 sing N N 23
60F "C2'" H7 sing N N 24
60F N H sing N N 25
60F N H2 sing N N 26
60F CA HA sing N N 27
60F CB H12 sing N N 28
60F CB H13 sing N N 29
60F C OXT sing N N 30
60F OXT HXT sing N N 31
ALA N CA sing N N 32
ALA N H sing N N 33
ALA N H2 sing N N 34
ALA CA C sing N N 35
ALA CA CB sing N N 36
ALA CA HA sing N N 37
ALA C O doub N N 38
ALA C OXT sing N N 39
ALA CB HB1 sing N N 40
ALA CB HB2 sing N N 41
ALA CB HB3 sing N N 42
ALA OXT HXT sing N N 43
ARG N CA sing N N 44
ARG N H sing N N 45
ARG N H2 sing N N 46
ARG CA C sing N N 47
ARG CA CB sing N N 48
ARG CA HA sing N N 49
ARG C O doub N N 50
ARG C OXT sing N N 51
ARG CB CG sing N N 52
ARG CB HB2 sing N N 53
ARG CB HB3 sing N N 54
ARG CG CD sing N N 55
ARG CG HG2 sing N N 56
ARG CG HG3 sing N N 57
ARG CD NE sing N N 58
ARG CD HD2 sing N N 59
ARG CD HD3 sing N N 60
ARG NE CZ sing N N 61
ARG NE HE sing N N 62
ARG CZ NH1 sing N N 63
ARG CZ NH2 doub N N 64
ARG NH1 HH11 sing N N 65
ARG NH1 HH12 sing N N 66
ARG NH2 HH21 sing N N 67
ARG NH2 HH22 sing N N 68
ARG OXT HXT sing N N 69
ASN N CA sing N N 70
ASN N H sing N N 71
ASN N H2 sing N N 72
ASN CA C sing N N 73
ASN CA CB sing N N 74
ASN CA HA sing N N 75
ASN C O doub N N 76
ASN C OXT sing N N 77
ASN CB CG sing N N 78
ASN CB HB2 sing N N 79
ASN CB HB3 sing N N 80
ASN CG OD1 doub N N 81
ASN CG ND2 sing N N 82
ASN ND2 HD21 sing N N 83
ASN ND2 HD22 sing N N 84
ASN OXT HXT sing N N 85
ASP N CA sing N N 86
ASP N H sing N N 87
ASP N H2 sing N N 88
ASP CA C sing N N 89
ASP CA CB sing N N 90
ASP CA HA sing N N 91
ASP C O doub N N 92
ASP C OXT sing N N 93
ASP CB CG sing N N 94
ASP CB HB2 sing N N 95
ASP CB HB3 sing N N 96
ASP CG OD1 doub N N 97
ASP CG OD2 sing N N 98
ASP OD2 HD2 sing N N 99
ASP OXT HXT sing N N 100
GLN N CA sing N N 101
GLN N H sing N N 102
GLN N H2 sing N N 103
GLN CA C sing N N 104
GLN CA CB sing N N 105
GLN CA HA sing N N 106
GLN C O doub N N 107
GLN C OXT sing N N 108
GLN CB CG sing N N 109
GLN CB HB2 sing N N 110
GLN CB HB3 sing N N 111
GLN CG CD sing N N 112
GLN CG HG2 sing N N 113
GLN CG HG3 sing N N 114
GLN CD OE1 doub N N 115
GLN CD NE2 sing N N 116
GLN NE2 HE21 sing N N 117
GLN NE2 HE22 sing N N 118
GLN OXT HXT sing N N 119
GLU N CA sing N N 120
GLU N H sing N N 121
GLU N H2 sing N N 122
GLU CA C sing N N 123
GLU CA CB sing N N 124
GLU CA HA sing N N 125
GLU C O doub N N 126
GLU C OXT sing N N 127
GLU CB CG sing N N 128
GLU CB HB2 sing N N 129
GLU CB HB3 sing N N 130
GLU CG CD sing N N 131
GLU CG HG2 sing N N 132
GLU CG HG3 sing N N 133
GLU CD OE1 doub N N 134
GLU CD OE2 sing N N 135
GLU OE2 HE2 sing N N 136
GLU OXT HXT sing N N 137
GLY N CA sing N N 138
GLY N H sing N N 139
GLY N H2 sing N N 140
GLY CA C sing N N 141
GLY CA HA2 sing N N 142
GLY CA HA3 sing N N 143
GLY C O doub N N 144
GLY C OXT sing N N 145
GLY OXT HXT sing N N 146
HIS N CA sing N N 147
HIS N H sing N N 148
HIS N H2 sing N N 149
HIS CA C sing N N 150
HIS CA CB sing N N 151
HIS CA HA sing N N 152
HIS C O doub N N 153
HIS C OXT sing N N 154
HIS CB CG sing N N 155
HIS CB HB2 sing N N 156
HIS CB HB3 sing N N 157
HIS CG ND1 sing Y N 158
HIS CG CD2 doub Y N 159
HIS ND1 CE1 doub Y N 160
HIS ND1 HD1 sing N N 161
HIS CD2 NE2 sing Y N 162
HIS CD2 HD2 sing N N 163
HIS CE1 NE2 sing Y N 164
HIS CE1 HE1 sing N N 165
HIS NE2 HE2 sing N N 166
HIS OXT HXT sing N N 167
HOH O H1 sing N N 168
HOH O H2 sing N N 169
ILE N CA sing N N 170
ILE N H sing N N 171
ILE N H2 sing N N 172
ILE CA C sing N N 173
ILE CA CB sing N N 174
ILE CA HA sing N N 175
ILE C O doub N N 176
ILE C OXT sing N N 177
ILE CB CG1 sing N N 178
ILE CB CG2 sing N N 179
ILE CB HB sing N N 180
ILE CG1 CD1 sing N N 181
ILE CG1 HG12 sing N N 182
ILE CG1 HG13 sing N N 183
ILE CG2 HG21 sing N N 184
ILE CG2 HG22 sing N N 185
ILE CG2 HG23 sing N N 186
ILE CD1 HD11 sing N N 187
ILE CD1 HD12 sing N N 188
ILE CD1 HD13 sing N N 189
ILE OXT HXT sing N N 190
LEU N CA sing N N 191
LEU N H sing N N 192
LEU N H2 sing N N 193
LEU CA C sing N N 194
LEU CA CB sing N N 195
LEU CA HA sing N N 196
LEU C O doub N N 197
LEU C OXT sing N N 198
LEU CB CG sing N N 199
LEU CB HB2 sing N N 200
LEU CB HB3 sing N N 201
LEU CG CD1 sing N N 202
LEU CG CD2 sing N N 203
LEU CG HG sing N N 204
LEU CD1 HD11 sing N N 205
LEU CD1 HD12 sing N N 206
LEU CD1 HD13 sing N N 207
LEU CD2 HD21 sing N N 208
LEU CD2 HD22 sing N N 209
LEU CD2 HD23 sing N N 210
LEU OXT HXT sing N N 211
LYS N CA sing N N 212
LYS N H sing N N 213
LYS N H2 sing N N 214
LYS CA C sing N N 215
LYS CA CB sing N N 216
LYS CA HA sing N N 217
LYS C O doub N N 218
LYS C OXT sing N N 219
LYS CB CG sing N N 220
LYS CB HB2 sing N N 221
LYS CB HB3 sing N N 222
LYS CG CD sing N N 223
LYS CG HG2 sing N N 224
LYS CG HG3 sing N N 225
LYS CD CE sing N N 226
LYS CD HD2 sing N N 227
LYS CD HD3 sing N N 228
LYS CE NZ sing N N 229
LYS CE HE2 sing N N 230
LYS CE HE3 sing N N 231
LYS NZ HZ1 sing N N 232
LYS NZ HZ2 sing N N 233
LYS NZ HZ3 sing N N 234
LYS OXT HXT sing N N 235
MET N CA sing N N 236
MET N H sing N N 237
MET N H2 sing N N 238
MET CA C sing N N 239
MET CA CB sing N N 240
MET CA HA sing N N 241
MET C O doub N N 242
MET C OXT sing N N 243
MET CB CG sing N N 244
MET CB HB2 sing N N 245
MET CB HB3 sing N N 246
MET CG SD sing N N 247
MET CG HG2 sing N N 248
MET CG HG3 sing N N 249
MET SD CE sing N N 250
MET CE HE1 sing N N 251
MET CE HE2 sing N N 252
MET CE HE3 sing N N 253
MET OXT HXT sing N N 254
PHE N CA sing N N 255
PHE N H sing N N 256
PHE N H2 sing N N 257
PHE CA C sing N N 258
PHE CA CB sing N N 259
PHE CA HA sing N N 260
PHE C O doub N N 261
PHE C OXT sing N N 262
PHE CB CG sing N N 263
PHE CB HB2 sing N N 264
PHE CB HB3 sing N N 265
PHE CG CD1 doub Y N 266
PHE CG CD2 sing Y N 267
PHE CD1 CE1 sing Y N 268
PHE CD1 HD1 sing N N 269
PHE CD2 CE2 doub Y N 270
PHE CD2 HD2 sing N N 271
PHE CE1 CZ doub Y N 272
PHE CE1 HE1 sing N N 273
PHE CE2 CZ sing Y N 274
PHE CE2 HE2 sing N N 275
PHE CZ HZ sing N N 276
PHE OXT HXT sing N N 277
PRO N CA sing N N 278
PRO N CD sing N N 279
PRO N H sing N N 280
PRO CA C sing N N 281
PRO CA CB sing N N 282
PRO CA HA sing N N 283
PRO C O doub N N 284
PRO C OXT sing N N 285
PRO CB CG sing N N 286
PRO CB HB2 sing N N 287
PRO CB HB3 sing N N 288
PRO CG CD sing N N 289
PRO CG HG2 sing N N 290
PRO CG HG3 sing N N 291
PRO CD HD2 sing N N 292
PRO CD HD3 sing N N 293
PRO OXT HXT sing N N 294
SER N CA sing N N 295
SER N H sing N N 296
SER N H2 sing N N 297
SER CA C sing N N 298
SER CA CB sing N N 299
SER CA HA sing N N 300
SER C O doub N N 301
SER C OXT sing N N 302
SER CB OG sing N N 303
SER CB HB2 sing N N 304
SER CB HB3 sing N N 305
SER OG HG sing N N 306
SER OXT HXT sing N N 307
THR N CA sing N N 308
THR N H sing N N 309
THR N H2 sing N N 310
THR CA C sing N N 311
THR CA CB sing N N 312
THR CA HA sing N N 313
THR C O doub N N 314
THR C OXT sing N N 315
THR CB OG1 sing N N 316
THR CB CG2 sing N N 317
THR CB HB sing N N 318
THR OG1 HG1 sing N N 319
THR CG2 HG21 sing N N 320
THR CG2 HG22 sing N N 321
THR CG2 HG23 sing N N 322
THR OXT HXT sing N N 323
TRP N CA sing N N 324
TRP N H sing N N 325
TRP N H2 sing N N 326
TRP CA C sing N N 327
TRP CA CB sing N N 328
TRP CA HA sing N N 329
TRP C O doub N N 330
TRP C OXT sing N N 331
TRP CB CG sing N N 332
TRP CB HB2 sing N N 333
TRP CB HB3 sing N N 334
TRP CG CD1 doub Y N 335
TRP CG CD2 sing Y N 336
TRP CD1 NE1 sing Y N 337
TRP CD1 HD1 sing N N 338
TRP CD2 CE2 doub Y N 339
TRP CD2 CE3 sing Y N 340
TRP NE1 CE2 sing Y N 341
TRP NE1 HE1 sing N N 342
TRP CE2 CZ2 sing Y N 343
TRP CE3 CZ3 doub Y N 344
TRP CE3 HE3 sing N N 345
TRP CZ2 CH2 doub Y N 346
TRP CZ2 HZ2 sing N N 347
TRP CZ3 CH2 sing Y N 348
TRP CZ3 HZ3 sing N N 349
TRP CH2 HH2 sing N N 350
TRP OXT HXT sing N N 351
TYR N CA sing N N 352
TYR N H sing N N 353
TYR N H2 sing N N 354
TYR CA C sing N N 355
TYR CA CB sing N N 356
TYR CA HA sing N N 357
TYR C O doub N N 358
TYR C OXT sing N N 359
TYR CB CG sing N N 360
TYR CB HB2 sing N N 361
TYR CB HB3 sing N N 362
TYR CG CD1 doub Y N 363
TYR CG CD2 sing Y N 364
TYR CD1 CE1 sing Y N 365
TYR CD1 HD1 sing N N 366
TYR CD2 CE2 doub Y N 367
TYR CD2 HD2 sing N N 368
TYR CE1 CZ doub Y N 369
TYR CE1 HE1 sing N N 370
TYR CE2 CZ sing Y N 371
TYR CE2 HE2 sing N N 372
TYR CZ OH sing N N 373
TYR OH HH sing N N 374
TYR OXT HXT sing N N 375
VAL N CA sing N N 376
VAL N H sing N N 377
VAL N H2 sing N N 378
VAL CA C sing N N 379
VAL CA CB sing N N 380
VAL CA HA sing N N 381
VAL C O doub N N 382
VAL C OXT sing N N 383
VAL CB CG1 sing N N 384
VAL CB CG2 sing N N 385
VAL CB HB sing N N 386
VAL CG1 HG11 sing N N 387
VAL CG1 HG12 sing N N 388
VAL CG1 HG13 sing N N 389
VAL CG2 HG21 sing N N 390
VAL CG2 HG22 sing N N 391
VAL CG2 HG23 sing N N 392
VAL OXT HXT sing N N 393
#
_atom_sites.entry_id 2PYP
_atom_sites.fract_transf_matrix[1][1] 0.014948
_atom_sites.fract_transf_matrix[1][2] 0.008630
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.017260
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.024510
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_