data_2Q03 # _entry.id 2Q03 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Q03 pdb_00002q03 10.2210/pdb2q03/pdb RCSB RCSB042980 ? ? WWPDB D_1000042980 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 372600 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2Q03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of uncharacterized protein (YP_563039.1) from Shewanella denitrificans OS217 at 1.80 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2Q03 _cell.length_a 145.830 _cell.length_b 145.830 _cell.length_c 45.470 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2Q03 _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 15372.400 2 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 water nat water 18.015 246 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)D(MSE)KTKLQTIIG(MSE)FQITAWDETSYFESDNGAKLTQAVITQSYQGVLQGHSEIRYL(MSE)SYQDNAN ATFVGFEHFTGSLGDKKGSFILQHKGLFAAGVASSEFELVERSATGDFVHLVGKGHFVSTENGQANYQITLQDS ; _entity_poly.pdbx_seq_one_letter_code_can ;GMDMKTKLQTIIGMFQITAWDETSYFESDNGAKLTQAVITQSYQGVLQGHSEIRYLMSYQDNANATFVGFEHFTGSLGDK KGSFILQHKGLFAAGVASSEFELVERSATGDFVHLVGKGHFVSTENGQANYQITLQDS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 372600 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASP n 1 4 MSE n 1 5 LYS n 1 6 THR n 1 7 LYS n 1 8 LEU n 1 9 GLN n 1 10 THR n 1 11 ILE n 1 12 ILE n 1 13 GLY n 1 14 MSE n 1 15 PHE n 1 16 GLN n 1 17 ILE n 1 18 THR n 1 19 ALA n 1 20 TRP n 1 21 ASP n 1 22 GLU n 1 23 THR n 1 24 SER n 1 25 TYR n 1 26 PHE n 1 27 GLU n 1 28 SER n 1 29 ASP n 1 30 ASN n 1 31 GLY n 1 32 ALA n 1 33 LYS n 1 34 LEU n 1 35 THR n 1 36 GLN n 1 37 ALA n 1 38 VAL n 1 39 ILE n 1 40 THR n 1 41 GLN n 1 42 SER n 1 43 TYR n 1 44 GLN n 1 45 GLY n 1 46 VAL n 1 47 LEU n 1 48 GLN n 1 49 GLY n 1 50 HIS n 1 51 SER n 1 52 GLU n 1 53 ILE n 1 54 ARG n 1 55 TYR n 1 56 LEU n 1 57 MSE n 1 58 SER n 1 59 TYR n 1 60 GLN n 1 61 ASP n 1 62 ASN n 1 63 ALA n 1 64 ASN n 1 65 ALA n 1 66 THR n 1 67 PHE n 1 68 VAL n 1 69 GLY n 1 70 PHE n 1 71 GLU n 1 72 HIS n 1 73 PHE n 1 74 THR n 1 75 GLY n 1 76 SER n 1 77 LEU n 1 78 GLY n 1 79 ASP n 1 80 LYS n 1 81 LYS n 1 82 GLY n 1 83 SER n 1 84 PHE n 1 85 ILE n 1 86 LEU n 1 87 GLN n 1 88 HIS n 1 89 LYS n 1 90 GLY n 1 91 LEU n 1 92 PHE n 1 93 ALA n 1 94 ALA n 1 95 GLY n 1 96 VAL n 1 97 ALA n 1 98 SER n 1 99 SER n 1 100 GLU n 1 101 PHE n 1 102 GLU n 1 103 LEU n 1 104 VAL n 1 105 GLU n 1 106 ARG n 1 107 SER n 1 108 ALA n 1 109 THR n 1 110 GLY n 1 111 ASP n 1 112 PHE n 1 113 VAL n 1 114 HIS n 1 115 LEU n 1 116 VAL n 1 117 GLY n 1 118 LYS n 1 119 GLY n 1 120 HIS n 1 121 PHE n 1 122 VAL n 1 123 SER n 1 124 THR n 1 125 GLU n 1 126 ASN n 1 127 GLY n 1 128 GLN n 1 129 ALA n 1 130 ASN n 1 131 TYR n 1 132 GLN n 1 133 ILE n 1 134 THR n 1 135 LEU n 1 136 GLN n 1 137 ASP n 1 138 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Shewanella _entity_src_gen.pdbx_gene_src_gene 'YP_563039.1, Sden_2034' _entity_src_gen.gene_src_species 'Shewanella denitrificans' _entity_src_gen.gene_src_strain 'OS217, DSM 15013' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella denitrificans OS217' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 318161 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc BAA-1090 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q12ML0_SHEDO _struct_ref.pdbx_db_accession Q12ML0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDMKTKLQTIIGMFQITAWDETSYFESDNGAKLTQAVITQSYQGVLQGHSEIRYLMSYQDNANATFVGFEHFTGSLGDKK GSFILQHKGLFAAGVASSEFELVERSATGDFVHLVGKGHFVSTENGQANYQITLQDS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2Q03 A 2 ? 138 ? Q12ML0 1 ? 137 ? 1 137 2 1 2Q03 B 2 ? 138 ? Q12ML0 1 ? 137 ? 1 137 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Q03 GLY A 1 ? UNP Q12ML0 ? ? 'expression tag' 0 1 1 2Q03 MSE A 2 ? UNP Q12ML0 MET 1 'modified residue' 1 2 1 2Q03 MSE A 4 ? UNP Q12ML0 MET 3 'modified residue' 3 3 1 2Q03 MSE A 14 ? UNP Q12ML0 MET 13 'modified residue' 13 4 1 2Q03 MSE A 57 ? UNP Q12ML0 MET 56 'modified residue' 56 5 2 2Q03 GLY B 1 ? UNP Q12ML0 ? ? 'expression tag' 0 6 2 2Q03 MSE B 2 ? UNP Q12ML0 MET 1 'modified residue' 1 7 2 2Q03 MSE B 4 ? UNP Q12ML0 MET 3 'modified residue' 3 8 2 2Q03 MSE B 14 ? UNP Q12ML0 MET 13 'modified residue' 13 9 2 2Q03 MSE B 57 ? UNP Q12ML0 MET 56 'modified residue' 56 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2Q03 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.00 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 69.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.61 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 15.9% Ethanol, 0.2M Magnesium chloride, 0.1M HEPES pH 7.61, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-04-29 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97926 1.0 3 0.97904 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97926, 0.97904' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2Q03 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 29.161 _reflns.number_obs 46034 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_netI_over_sigmaI 11.640 _reflns.percent_possible_obs 99.800 _reflns.B_iso_Wilson_estimate 29.12 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.86 30204 ? 8062 0.466 2.53 ? ? ? ? ? 99.20 1 1 1.86 1.94 35497 ? 9317 0.335 3.6 ? ? ? ? ? 100.00 2 1 1.94 2.03 33853 ? 8850 0.226 5.4 ? ? ? ? ? 100.00 3 1 2.03 2.13 31048 ? 8108 0.166 7.3 ? ? ? ? ? 100.00 4 1 2.13 2.27 34784 ? 9154 0.130 9.4 ? ? ? ? ? 99.90 5 1 2.27 2.44 31936 ? 8396 0.106 11.2 ? ? ? ? ? 100.00 6 1 2.44 2.69 33635 ? 8876 0.082 14.0 ? ? ? ? ? 100.00 7 1 2.69 3.07 31793 ? 8502 0.064 17.9 ? ? ? ? ? 100.00 8 1 3.07 3.87 32350 ? 8740 0.052 21.5 ? ? ? ? ? 99.90 9 1 3.87 29.16 32335 ? 8727 0.041 23.4 ? ? ? ? ? 99.30 10 1 # _refine.entry_id 2Q03 _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 29.161 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.850 _refine.ls_number_reflns_obs 45976 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. TWO GLYCEROL MOLECULES ARE MODELED IN THE STRUCTURE. 5. RESIDUES 1 TO 4 IN SUBUNIT A AND B, RESIDUES 156 AND 137 IN SUBUNIT B ARE DISORDERED AND NOT MODELED IN THE STRUCTURE. ; _refine.ls_R_factor_obs 0.168 _refine.ls_R_factor_R_work 0.167 _refine.ls_R_factor_R_free 0.183 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2322 _refine.B_iso_mean 31.343 _refine.aniso_B[1][1] -0.010 _refine.aniso_B[2][2] -0.010 _refine.aniso_B[3][3] 0.020 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.962 _refine.pdbx_overall_ESU_R 0.081 _refine.pdbx_overall_ESU_R_Free 0.078 _refine.overall_SU_ML 0.058 _refine.overall_SU_B 3.686 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2008 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 246 _refine_hist.number_atoms_total 2266 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 29.161 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2187 0.018 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1863 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2973 1.783 1.913 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4331 0.851 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 288 4.986 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 107 32.989 25.140 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 341 11.245 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 13.671 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 322 0.105 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2581 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 478 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 306 0.168 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1849 0.172 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1021 0.180 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1429 0.088 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 304 0.212 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.106 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 20 0.150 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 16 0.259 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other 1 0.013 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1417 2.321 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 586 0.507 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2192 3.303 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 885 5.539 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 781 8.185 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.400 _refine_ls_shell.number_reflns_R_work 3156 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.R_factor_R_free 0.253 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 164 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 3320 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2Q03 _struct.title 'Crystal structure of uncharacterized protein (YP_563039.1) from Shewanella denitrificans OS217 at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_563039.1, uncharacterized protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 2Q03 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. ; # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 13 C ? ? ? 1_555 A MSE 14 N A ? A GLY 12 A MSE 13 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A GLY 13 C ? ? ? 1_555 A MSE 14 N B ? A GLY 12 A MSE 13 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale3 covale both ? A MSE 14 C A ? ? 1_555 A PHE 15 N ? ? A MSE 13 A PHE 14 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A MSE 14 C B ? ? 1_555 A PHE 15 N ? ? A MSE 13 A PHE 14 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale5 covale both ? A LEU 56 C ? ? ? 1_555 A MSE 57 N ? ? A LEU 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A MSE 57 C ? ? ? 1_555 A SER 58 N ? ? A MSE 56 A SER 57 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale7 covale both ? B GLY 13 C ? ? ? 1_555 B MSE 14 N B ? B GLY 12 B MSE 13 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? B GLY 13 C ? ? ? 1_555 B MSE 14 N A ? B GLY 12 B MSE 13 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? B MSE 14 C B ? ? 1_555 B PHE 15 N ? ? B MSE 13 B PHE 14 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale10 covale both ? B MSE 14 C A ? ? 1_555 B PHE 15 N ? ? B MSE 13 B PHE 14 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale11 covale both ? B LEU 56 C ? ? ? 1_555 B MSE 57 N ? ? B LEU 55 B MSE 56 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale12 covale both ? B MSE 57 C ? ? ? 1_555 B SER 58 N ? ? B MSE 56 B SER 57 1_555 ? ? ? ? ? ? ? 1.333 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 109 ? GLY A 110 ? THR A 108 GLY A 109 A 2 LYS A 80 ? ALA A 93 ? LYS A 79 ALA A 92 A 3 VAL A 96 ? LEU A 103 ? VAL A 95 LEU A 102 A 4 LEU A 115 ? SER A 123 ? LEU A 114 SER A 122 A 5 GLN A 128 ? ASP A 137 ? GLN A 127 ASP A 136 A 6 LEU A 8 ? GLU A 27 ? LEU A 7 GLU A 26 A 7 LYS A 33 ? TYR A 43 ? LYS A 32 TYR A 42 A 8 LEU A 47 ? ASP A 61 ? LEU A 46 ASP A 60 A 9 ASN A 64 ? LEU A 77 ? ASN A 63 LEU A 76 A 10 LYS A 80 ? ALA A 93 ? LYS A 79 ALA A 92 B 1 THR B 109 ? GLY B 110 ? THR B 108 GLY B 109 B 2 LYS B 80 ? ALA B 93 ? LYS B 79 ALA B 92 B 3 VAL B 96 ? LEU B 103 ? VAL B 95 LEU B 102 B 4 VAL B 116 ? SER B 123 ? VAL B 115 SER B 122 B 5 GLN B 128 ? GLN B 136 ? GLN B 127 GLN B 135 B 6 GLN B 9 ? GLU B 27 ? GLN B 8 GLU B 26 B 7 LYS B 33 ? TYR B 43 ? LYS B 32 TYR B 42 B 8 LEU B 47 ? ASP B 61 ? LEU B 46 ASP B 60 B 9 ASN B 64 ? LEU B 77 ? ASN B 63 LEU B 76 B 10 LYS B 80 ? ALA B 93 ? LYS B 79 ALA B 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 109 ? O THR A 108 N SER A 83 ? N SER A 82 A 2 3 N GLN A 87 ? N GLN A 86 O GLU A 102 ? O GLU A 101 A 3 4 N ALA A 97 ? N ALA A 96 O SER A 123 ? O SER A 122 A 4 5 N LYS A 118 ? N LYS A 117 O THR A 134 ? O THR A 133 A 5 6 O LEU A 135 ? O LEU A 134 N GLN A 9 ? N GLN A 8 A 6 7 N TYR A 25 ? N TYR A 24 O LEU A 34 ? O LEU A 33 A 7 8 N ILE A 39 ? N ILE A 38 O ILE A 53 ? O ILE A 52 A 8 9 N SER A 58 ? N SER A 57 O THR A 66 ? O THR A 65 A 9 10 N PHE A 67 ? N PHE A 66 O GLY A 90 ? O GLY A 89 B 1 2 O THR B 109 ? O THR B 108 N SER B 83 ? N SER B 82 B 2 3 N GLN B 87 ? N GLN B 86 O GLU B 102 ? O GLU B 101 B 3 4 N ALA B 97 ? N ALA B 96 O SER B 123 ? O SER B 122 B 4 5 N LYS B 118 ? N LYS B 117 O THR B 134 ? O THR B 133 B 5 6 O TYR B 131 ? O TYR B 130 N GLY B 13 ? N GLY B 12 B 6 7 N TYR B 25 ? N TYR B 24 O LEU B 34 ? O LEU B 33 B 7 8 N ILE B 39 ? N ILE B 38 O ILE B 53 ? O ILE B 52 B 8 9 N GLN B 48 ? N GLN B 47 O SER B 76 ? O SER B 75 B 9 10 N PHE B 67 ? N PHE B 66 O GLY B 90 ? O GLY B 89 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B GOL 138 ? 6 'BINDING SITE FOR RESIDUE GOL B 138' AC2 Software A GOL 138 ? 7 'BINDING SITE FOR RESIDUE GOL A 138' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU B 100 ? GLU B 99 . ? 1_555 ? 2 AC1 6 LYS B 118 ? LYS B 117 . ? 1_555 ? 3 AC1 6 GLY B 119 ? GLY B 118 . ? 1_555 ? 4 AC1 6 HIS B 120 ? HIS B 119 . ? 1_555 ? 5 AC1 6 GLN B 132 ? GLN B 131 . ? 1_555 ? 6 AC1 6 THR B 134 ? THR B 133 . ? 1_555 ? 7 AC2 7 GLU A 100 ? GLU A 99 . ? 1_555 ? 8 AC2 7 LYS A 118 ? LYS A 117 . ? 1_555 ? 9 AC2 7 GLY A 119 ? GLY A 118 . ? 1_555 ? 10 AC2 7 HIS A 120 ? HIS A 119 . ? 1_555 ? 11 AC2 7 GLN A 132 ? GLN A 131 . ? 1_555 ? 12 AC2 7 THR A 134 ? THR A 133 . ? 1_555 ? 13 AC2 7 HOH E . ? HOH A 178 . ? 1_555 ? # _atom_sites.entry_id 2Q03 _atom_sites.fract_transf_matrix[1][1] 0.006857 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006857 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021993 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ASP 3 2 ? ? ? A . n A 1 4 MSE 4 3 ? ? ? A . n A 1 5 LYS 5 4 ? ? ? A . n A 1 6 THR 6 5 5 THR THR A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 ILE 12 11 11 ILE ILE A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 MSE 14 13 13 MSE MSE A . n A 1 15 PHE 15 14 14 PHE PHE A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 TRP 20 19 19 TRP TRP A . n A 1 21 ASP 21 20 20 ASP ASP A . n A 1 22 GLU 22 21 21 GLU GLU A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 TYR 25 24 24 TYR TYR A . n A 1 26 PHE 26 25 25 PHE PHE A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 ASN 30 29 29 ASN ASN A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 GLN 36 35 35 GLN GLN A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 ILE 39 38 38 ILE ILE A . n A 1 40 THR 40 39 39 THR THR A . n A 1 41 GLN 41 40 40 GLN GLN A . n A 1 42 SER 42 41 41 SER SER A . n A 1 43 TYR 43 42 42 TYR TYR A . n A 1 44 GLN 44 43 43 GLN GLN A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 GLN 48 47 47 GLN GLN A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 HIS 50 49 49 HIS HIS A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 MSE 57 56 56 MSE MSE A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 TYR 59 58 58 TYR TYR A . n A 1 60 GLN 60 59 59 GLN GLN A . n A 1 61 ASP 61 60 60 ASP ASP A . n A 1 62 ASN 62 61 61 ASN ASN A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 ASN 64 63 63 ASN ASN A . n A 1 65 ALA 65 64 64 ALA ALA A . n A 1 66 THR 66 65 65 THR THR A . n A 1 67 PHE 67 66 66 PHE PHE A . n A 1 68 VAL 68 67 67 VAL VAL A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 PHE 70 69 69 PHE PHE A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 PHE 73 72 72 PHE PHE A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 SER 76 75 75 SER SER A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 LYS 80 79 79 LYS LYS A . n A 1 81 LYS 81 80 80 LYS LYS A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 PHE 84 83 83 PHE PHE A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 GLN 87 86 86 GLN GLN A . n A 1 88 HIS 88 87 87 HIS HIS A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 GLY 90 89 89 GLY GLY A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 PHE 92 91 91 PHE PHE A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 GLY 95 94 94 GLY GLY A . n A 1 96 VAL 96 95 95 VAL VAL A . n A 1 97 ALA 97 96 96 ALA ALA A . n A 1 98 SER 98 97 97 SER SER A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 GLU 102 101 101 GLU GLU A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 ARG 106 105 105 ARG ARG A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 THR 109 108 108 THR THR A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 PHE 112 111 111 PHE PHE A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 HIS 114 113 113 HIS HIS A . n A 1 115 LEU 115 114 114 LEU LEU A . n A 1 116 VAL 116 115 115 VAL VAL A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 HIS 120 119 119 HIS HIS A . n A 1 121 PHE 121 120 120 PHE PHE A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 SER 123 122 122 SER SER A . n A 1 124 THR 124 123 123 THR THR A . n A 1 125 GLU 125 124 124 GLU GLU A . n A 1 126 ASN 126 125 125 ASN ASN A . n A 1 127 GLY 127 126 126 GLY GLY A . n A 1 128 GLN 128 127 127 GLN GLN A . n A 1 129 ALA 129 128 128 ALA ALA A . n A 1 130 ASN 130 129 129 ASN ASN A . n A 1 131 TYR 131 130 130 TYR TYR A . n A 1 132 GLN 132 131 131 GLN GLN A . n A 1 133 ILE 133 132 132 ILE ILE A . n A 1 134 THR 134 133 133 THR THR A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 GLN 136 135 135 GLN GLN A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 SER 138 137 137 SER SER A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 ASP 3 2 ? ? ? B . n B 1 4 MSE 4 3 ? ? ? B . n B 1 5 LYS 5 4 ? ? ? B . n B 1 6 THR 6 5 5 THR THR B . n B 1 7 LYS 7 6 6 LYS LYS B . n B 1 8 LEU 8 7 7 LEU LEU B . n B 1 9 GLN 9 8 8 GLN GLN B . n B 1 10 THR 10 9 9 THR THR B . n B 1 11 ILE 11 10 10 ILE ILE B . n B 1 12 ILE 12 11 11 ILE ILE B . n B 1 13 GLY 13 12 12 GLY GLY B . n B 1 14 MSE 14 13 13 MSE MSE B . n B 1 15 PHE 15 14 14 PHE PHE B . n B 1 16 GLN 16 15 15 GLN GLN B . n B 1 17 ILE 17 16 16 ILE ILE B . n B 1 18 THR 18 17 17 THR THR B . n B 1 19 ALA 19 18 18 ALA ALA B . n B 1 20 TRP 20 19 19 TRP TRP B . n B 1 21 ASP 21 20 20 ASP ASP B . n B 1 22 GLU 22 21 21 GLU GLU B . n B 1 23 THR 23 22 22 THR THR B . n B 1 24 SER 24 23 23 SER SER B . n B 1 25 TYR 25 24 24 TYR TYR B . n B 1 26 PHE 26 25 25 PHE PHE B . n B 1 27 GLU 27 26 26 GLU GLU B . n B 1 28 SER 28 27 27 SER SER B . n B 1 29 ASP 29 28 28 ASP ASP B . n B 1 30 ASN 30 29 29 ASN ASN B . n B 1 31 GLY 31 30 30 GLY GLY B . n B 1 32 ALA 32 31 31 ALA ALA B . n B 1 33 LYS 33 32 32 LYS LYS B . n B 1 34 LEU 34 33 33 LEU LEU B . n B 1 35 THR 35 34 34 THR THR B . n B 1 36 GLN 36 35 35 GLN GLN B . n B 1 37 ALA 37 36 36 ALA ALA B . n B 1 38 VAL 38 37 37 VAL VAL B . n B 1 39 ILE 39 38 38 ILE ILE B . n B 1 40 THR 40 39 39 THR THR B . n B 1 41 GLN 41 40 40 GLN GLN B . n B 1 42 SER 42 41 41 SER SER B . n B 1 43 TYR 43 42 42 TYR TYR B . n B 1 44 GLN 44 43 43 GLN GLN B . n B 1 45 GLY 45 44 44 GLY GLY B . n B 1 46 VAL 46 45 45 VAL VAL B . n B 1 47 LEU 47 46 46 LEU LEU B . n B 1 48 GLN 48 47 47 GLN GLN B . n B 1 49 GLY 49 48 48 GLY GLY B . n B 1 50 HIS 50 49 49 HIS HIS B . n B 1 51 SER 51 50 50 SER SER B . n B 1 52 GLU 52 51 51 GLU GLU B . n B 1 53 ILE 53 52 52 ILE ILE B . n B 1 54 ARG 54 53 53 ARG ARG B . n B 1 55 TYR 55 54 54 TYR TYR B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 MSE 57 56 56 MSE MSE B . n B 1 58 SER 58 57 57 SER SER B . n B 1 59 TYR 59 58 58 TYR TYR B . n B 1 60 GLN 60 59 59 GLN GLN B . n B 1 61 ASP 61 60 60 ASP ASP B . n B 1 62 ASN 62 61 61 ASN ASN B . n B 1 63 ALA 63 62 62 ALA ALA B . n B 1 64 ASN 64 63 63 ASN ASN B . n B 1 65 ALA 65 64 64 ALA ALA B . n B 1 66 THR 66 65 65 THR THR B . n B 1 67 PHE 67 66 66 PHE PHE B . n B 1 68 VAL 68 67 67 VAL VAL B . n B 1 69 GLY 69 68 68 GLY GLY B . n B 1 70 PHE 70 69 69 PHE PHE B . n B 1 71 GLU 71 70 70 GLU GLU B . n B 1 72 HIS 72 71 71 HIS HIS B . n B 1 73 PHE 73 72 72 PHE PHE B . n B 1 74 THR 74 73 73 THR THR B . n B 1 75 GLY 75 74 74 GLY GLY B . n B 1 76 SER 76 75 75 SER SER B . n B 1 77 LEU 77 76 76 LEU LEU B . n B 1 78 GLY 78 77 77 GLY GLY B . n B 1 79 ASP 79 78 78 ASP ASP B . n B 1 80 LYS 80 79 79 LYS LYS B . n B 1 81 LYS 81 80 80 LYS LYS B . n B 1 82 GLY 82 81 81 GLY GLY B . n B 1 83 SER 83 82 82 SER SER B . n B 1 84 PHE 84 83 83 PHE PHE B . n B 1 85 ILE 85 84 84 ILE ILE B . n B 1 86 LEU 86 85 85 LEU LEU B . n B 1 87 GLN 87 86 86 GLN GLN B . n B 1 88 HIS 88 87 87 HIS HIS B . n B 1 89 LYS 89 88 88 LYS LYS B . n B 1 90 GLY 90 89 89 GLY GLY B . n B 1 91 LEU 91 90 90 LEU LEU B . n B 1 92 PHE 92 91 91 PHE PHE B . n B 1 93 ALA 93 92 92 ALA ALA B . n B 1 94 ALA 94 93 93 ALA ALA B . n B 1 95 GLY 95 94 94 GLY GLY B . n B 1 96 VAL 96 95 95 VAL VAL B . n B 1 97 ALA 97 96 96 ALA ALA B . n B 1 98 SER 98 97 97 SER SER B . n B 1 99 SER 99 98 98 SER SER B . n B 1 100 GLU 100 99 99 GLU GLU B . n B 1 101 PHE 101 100 100 PHE PHE B . n B 1 102 GLU 102 101 101 GLU GLU B . n B 1 103 LEU 103 102 102 LEU LEU B . n B 1 104 VAL 104 103 103 VAL VAL B . n B 1 105 GLU 105 104 104 GLU GLU B . n B 1 106 ARG 106 105 105 ARG ARG B . n B 1 107 SER 107 106 106 SER SER B . n B 1 108 ALA 108 107 107 ALA ALA B . n B 1 109 THR 109 108 108 THR THR B . n B 1 110 GLY 110 109 109 GLY GLY B . n B 1 111 ASP 111 110 110 ASP ASP B . n B 1 112 PHE 112 111 111 PHE PHE B . n B 1 113 VAL 113 112 112 VAL VAL B . n B 1 114 HIS 114 113 113 HIS HIS B . n B 1 115 LEU 115 114 114 LEU LEU B . n B 1 116 VAL 116 115 115 VAL VAL B . n B 1 117 GLY 117 116 116 GLY GLY B . n B 1 118 LYS 118 117 117 LYS LYS B . n B 1 119 GLY 119 118 118 GLY GLY B . n B 1 120 HIS 120 119 119 HIS HIS B . n B 1 121 PHE 121 120 120 PHE PHE B . n B 1 122 VAL 122 121 121 VAL VAL B . n B 1 123 SER 123 122 122 SER SER B . n B 1 124 THR 124 123 123 THR THR B . n B 1 125 GLU 125 124 124 GLU GLU B . n B 1 126 ASN 126 125 125 ASN ASN B . n B 1 127 GLY 127 126 126 GLY GLY B . n B 1 128 GLN 128 127 127 GLN GLN B . n B 1 129 ALA 129 128 128 ALA ALA B . n B 1 130 ASN 130 129 129 ASN ASN B . n B 1 131 TYR 131 130 130 TYR TYR B . n B 1 132 GLN 132 131 131 GLN GLN B . n B 1 133 ILE 133 132 132 ILE ILE B . n B 1 134 THR 134 133 133 THR THR B . n B 1 135 LEU 135 134 134 LEU LEU B . n B 1 136 GLN 136 135 135 GLN GLN B . n B 1 137 ASP 137 136 ? ? ? B . n B 1 138 SER 138 137 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 138 2 GOL GOL A . D 2 GOL 1 138 1 GOL GOL B . E 3 HOH 1 139 3 HOH HOH A . E 3 HOH 2 140 4 HOH HOH A . E 3 HOH 3 141 10 HOH HOH A . E 3 HOH 4 142 12 HOH HOH A . E 3 HOH 5 143 15 HOH HOH A . E 3 HOH 6 144 16 HOH HOH A . E 3 HOH 7 145 17 HOH HOH A . E 3 HOH 8 146 18 HOH HOH A . E 3 HOH 9 147 23 HOH HOH A . E 3 HOH 10 148 24 HOH HOH A . E 3 HOH 11 149 25 HOH HOH A . E 3 HOH 12 150 27 HOH HOH A . E 3 HOH 13 151 32 HOH HOH A . E 3 HOH 14 152 33 HOH HOH A . E 3 HOH 15 153 34 HOH HOH A . E 3 HOH 16 154 38 HOH HOH A . E 3 HOH 17 155 39 HOH HOH A . E 3 HOH 18 156 40 HOH HOH A . E 3 HOH 19 157 42 HOH HOH A . E 3 HOH 20 158 43 HOH HOH A . E 3 HOH 21 159 45 HOH HOH A . E 3 HOH 22 160 46 HOH HOH A . E 3 HOH 23 161 47 HOH HOH A . E 3 HOH 24 162 49 HOH HOH A . E 3 HOH 25 163 51 HOH HOH A . E 3 HOH 26 164 53 HOH HOH A . E 3 HOH 27 165 56 HOH HOH A . E 3 HOH 28 166 58 HOH HOH A . E 3 HOH 29 167 60 HOH HOH A . E 3 HOH 30 168 61 HOH HOH A . E 3 HOH 31 169 62 HOH HOH A . E 3 HOH 32 170 63 HOH HOH A . E 3 HOH 33 171 68 HOH HOH A . E 3 HOH 34 172 69 HOH HOH A . E 3 HOH 35 173 72 HOH HOH A . E 3 HOH 36 174 73 HOH HOH A . E 3 HOH 37 175 81 HOH HOH A . E 3 HOH 38 176 84 HOH HOH A . E 3 HOH 39 177 85 HOH HOH A . E 3 HOH 40 178 86 HOH HOH A . E 3 HOH 41 179 89 HOH HOH A . E 3 HOH 42 180 92 HOH HOH A . E 3 HOH 43 181 93 HOH HOH A . E 3 HOH 44 182 94 HOH HOH A . E 3 HOH 45 183 96 HOH HOH A . E 3 HOH 46 184 99 HOH HOH A . E 3 HOH 47 185 104 HOH HOH A . E 3 HOH 48 186 105 HOH HOH A . E 3 HOH 49 187 106 HOH HOH A . E 3 HOH 50 188 109 HOH HOH A . E 3 HOH 51 189 111 HOH HOH A . E 3 HOH 52 190 112 HOH HOH A . E 3 HOH 53 191 113 HOH HOH A . E 3 HOH 54 192 114 HOH HOH A . E 3 HOH 55 193 116 HOH HOH A . E 3 HOH 56 194 119 HOH HOH A . E 3 HOH 57 195 120 HOH HOH A . E 3 HOH 58 196 122 HOH HOH A . E 3 HOH 59 197 128 HOH HOH A . E 3 HOH 60 198 129 HOH HOH A . E 3 HOH 61 199 131 HOH HOH A . E 3 HOH 62 200 132 HOH HOH A . E 3 HOH 63 201 135 HOH HOH A . E 3 HOH 64 202 138 HOH HOH A . E 3 HOH 65 203 141 HOH HOH A . E 3 HOH 66 204 143 HOH HOH A . E 3 HOH 67 205 144 HOH HOH A . E 3 HOH 68 206 145 HOH HOH A . E 3 HOH 69 207 146 HOH HOH A . E 3 HOH 70 208 147 HOH HOH A . E 3 HOH 71 209 149 HOH HOH A . E 3 HOH 72 210 157 HOH HOH A . E 3 HOH 73 211 159 HOH HOH A . E 3 HOH 74 212 160 HOH HOH A . E 3 HOH 75 213 162 HOH HOH A . E 3 HOH 76 214 164 HOH HOH A . E 3 HOH 77 215 165 HOH HOH A . E 3 HOH 78 216 167 HOH HOH A . E 3 HOH 79 217 170 HOH HOH A . E 3 HOH 80 218 172 HOH HOH A . E 3 HOH 81 219 176 HOH HOH A . E 3 HOH 82 220 179 HOH HOH A . E 3 HOH 83 221 180 HOH HOH A . E 3 HOH 84 222 182 HOH HOH A . E 3 HOH 85 223 184 HOH HOH A . E 3 HOH 86 224 186 HOH HOH A . E 3 HOH 87 225 187 HOH HOH A . E 3 HOH 88 226 188 HOH HOH A . E 3 HOH 89 227 190 HOH HOH A . E 3 HOH 90 228 192 HOH HOH A . E 3 HOH 91 229 194 HOH HOH A . E 3 HOH 92 230 195 HOH HOH A . E 3 HOH 93 231 196 HOH HOH A . E 3 HOH 94 232 198 HOH HOH A . E 3 HOH 95 233 199 HOH HOH A . E 3 HOH 96 234 201 HOH HOH A . E 3 HOH 97 235 203 HOH HOH A . E 3 HOH 98 236 204 HOH HOH A . E 3 HOH 99 237 205 HOH HOH A . E 3 HOH 100 238 206 HOH HOH A . E 3 HOH 101 239 208 HOH HOH A . E 3 HOH 102 240 209 HOH HOH A . E 3 HOH 103 241 210 HOH HOH A . E 3 HOH 104 242 211 HOH HOH A . E 3 HOH 105 243 212 HOH HOH A . E 3 HOH 106 244 216 HOH HOH A . E 3 HOH 107 245 218 HOH HOH A . E 3 HOH 108 246 220 HOH HOH A . E 3 HOH 109 247 222 HOH HOH A . E 3 HOH 110 248 224 HOH HOH A . E 3 HOH 111 249 229 HOH HOH A . E 3 HOH 112 250 231 HOH HOH A . E 3 HOH 113 251 232 HOH HOH A . E 3 HOH 114 252 235 HOH HOH A . E 3 HOH 115 253 237 HOH HOH A . E 3 HOH 116 254 239 HOH HOH A . E 3 HOH 117 255 240 HOH HOH A . E 3 HOH 118 256 242 HOH HOH A . E 3 HOH 119 257 244 HOH HOH A . E 3 HOH 120 258 246 HOH HOH A . E 3 HOH 121 259 247 HOH HOH A . E 3 HOH 122 260 248 HOH HOH A . F 3 HOH 1 139 5 HOH HOH B . F 3 HOH 2 140 6 HOH HOH B . F 3 HOH 3 141 7 HOH HOH B . F 3 HOH 4 142 8 HOH HOH B . F 3 HOH 5 143 9 HOH HOH B . F 3 HOH 6 144 11 HOH HOH B . F 3 HOH 7 145 13 HOH HOH B . F 3 HOH 8 146 14 HOH HOH B . F 3 HOH 9 147 19 HOH HOH B . F 3 HOH 10 148 20 HOH HOH B . F 3 HOH 11 149 21 HOH HOH B . F 3 HOH 12 150 22 HOH HOH B . F 3 HOH 13 151 26 HOH HOH B . F 3 HOH 14 152 28 HOH HOH B . F 3 HOH 15 153 29 HOH HOH B . F 3 HOH 16 154 30 HOH HOH B . F 3 HOH 17 155 31 HOH HOH B . F 3 HOH 18 156 35 HOH HOH B . F 3 HOH 19 157 36 HOH HOH B . F 3 HOH 20 158 37 HOH HOH B . F 3 HOH 21 159 41 HOH HOH B . F 3 HOH 22 160 44 HOH HOH B . F 3 HOH 23 161 48 HOH HOH B . F 3 HOH 24 162 50 HOH HOH B . F 3 HOH 25 163 52 HOH HOH B . F 3 HOH 26 164 54 HOH HOH B . F 3 HOH 27 165 55 HOH HOH B . F 3 HOH 28 166 57 HOH HOH B . F 3 HOH 29 167 59 HOH HOH B . F 3 HOH 30 168 64 HOH HOH B . F 3 HOH 31 169 65 HOH HOH B . F 3 HOH 32 170 66 HOH HOH B . F 3 HOH 33 171 67 HOH HOH B . F 3 HOH 34 172 70 HOH HOH B . F 3 HOH 35 173 71 HOH HOH B . F 3 HOH 36 174 74 HOH HOH B . F 3 HOH 37 175 75 HOH HOH B . F 3 HOH 38 176 76 HOH HOH B . F 3 HOH 39 177 77 HOH HOH B . F 3 HOH 40 178 78 HOH HOH B . F 3 HOH 41 179 79 HOH HOH B . F 3 HOH 42 180 80 HOH HOH B . F 3 HOH 43 181 82 HOH HOH B . F 3 HOH 44 182 83 HOH HOH B . F 3 HOH 45 183 87 HOH HOH B . F 3 HOH 46 184 88 HOH HOH B . F 3 HOH 47 185 90 HOH HOH B . F 3 HOH 48 186 91 HOH HOH B . F 3 HOH 49 187 95 HOH HOH B . F 3 HOH 50 188 97 HOH HOH B . F 3 HOH 51 189 98 HOH HOH B . F 3 HOH 52 190 100 HOH HOH B . F 3 HOH 53 191 101 HOH HOH B . F 3 HOH 54 192 102 HOH HOH B . F 3 HOH 55 193 103 HOH HOH B . F 3 HOH 56 194 107 HOH HOH B . F 3 HOH 57 195 108 HOH HOH B . F 3 HOH 58 196 110 HOH HOH B . F 3 HOH 59 197 115 HOH HOH B . F 3 HOH 60 198 117 HOH HOH B . F 3 HOH 61 199 118 HOH HOH B . F 3 HOH 62 200 121 HOH HOH B . F 3 HOH 63 201 123 HOH HOH B . F 3 HOH 64 202 124 HOH HOH B . F 3 HOH 65 203 125 HOH HOH B . F 3 HOH 66 204 126 HOH HOH B . F 3 HOH 67 205 127 HOH HOH B . F 3 HOH 68 206 130 HOH HOH B . F 3 HOH 69 207 133 HOH HOH B . F 3 HOH 70 208 134 HOH HOH B . F 3 HOH 71 209 136 HOH HOH B . F 3 HOH 72 210 137 HOH HOH B . F 3 HOH 73 211 139 HOH HOH B . F 3 HOH 74 212 140 HOH HOH B . F 3 HOH 75 213 142 HOH HOH B . F 3 HOH 76 214 148 HOH HOH B . F 3 HOH 77 215 150 HOH HOH B . F 3 HOH 78 216 151 HOH HOH B . F 3 HOH 79 217 152 HOH HOH B . F 3 HOH 80 218 153 HOH HOH B . F 3 HOH 81 219 154 HOH HOH B . F 3 HOH 82 220 155 HOH HOH B . F 3 HOH 83 221 156 HOH HOH B . F 3 HOH 84 222 158 HOH HOH B . F 3 HOH 85 223 161 HOH HOH B . F 3 HOH 86 224 163 HOH HOH B . F 3 HOH 87 225 166 HOH HOH B . F 3 HOH 88 226 168 HOH HOH B . F 3 HOH 89 227 169 HOH HOH B . F 3 HOH 90 228 171 HOH HOH B . F 3 HOH 91 229 173 HOH HOH B . F 3 HOH 92 230 174 HOH HOH B . F 3 HOH 93 231 175 HOH HOH B . F 3 HOH 94 232 177 HOH HOH B . F 3 HOH 95 233 178 HOH HOH B . F 3 HOH 96 234 181 HOH HOH B . F 3 HOH 97 235 183 HOH HOH B . F 3 HOH 98 236 185 HOH HOH B . F 3 HOH 99 237 189 HOH HOH B . F 3 HOH 100 238 191 HOH HOH B . F 3 HOH 101 239 193 HOH HOH B . F 3 HOH 102 240 197 HOH HOH B . F 3 HOH 103 241 200 HOH HOH B . F 3 HOH 104 242 202 HOH HOH B . F 3 HOH 105 243 207 HOH HOH B . F 3 HOH 106 244 213 HOH HOH B . F 3 HOH 107 245 214 HOH HOH B . F 3 HOH 108 246 215 HOH HOH B . F 3 HOH 109 247 217 HOH HOH B . F 3 HOH 110 248 219 HOH HOH B . F 3 HOH 111 249 221 HOH HOH B . F 3 HOH 112 250 223 HOH HOH B . F 3 HOH 113 251 225 HOH HOH B . F 3 HOH 114 252 226 HOH HOH B . F 3 HOH 115 253 227 HOH HOH B . F 3 HOH 116 254 228 HOH HOH B . F 3 HOH 117 255 230 HOH HOH B . F 3 HOH 118 256 233 HOH HOH B . F 3 HOH 119 257 234 HOH HOH B . F 3 HOH 120 258 236 HOH HOH B . F 3 HOH 121 259 238 HOH HOH B . F 3 HOH 122 260 241 HOH HOH B . F 3 HOH 123 261 243 HOH HOH B . F 3 HOH 124 262 245 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 14 A MSE 13 ? MET SELENOMETHIONINE 2 A MSE 57 A MSE 56 ? MET SELENOMETHIONINE 3 B MSE 14 B MSE 13 ? MET SELENOMETHIONINE 4 B MSE 57 B MSE 56 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2650 ? 1 MORE -12 ? 1 'SSA (A^2)' 12930 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-29 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2019-07-24 7 'Structure model' 1 6 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' 9 7 'Structure model' 'Database references' 10 7 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' software 4 6 'Structure model' struct_conn 5 7 'Structure model' database_2 6 7 'Structure model' struct_ref_seq_dif 7 7 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_software.classification' 4 6 'Structure model' '_software.contact_author' 5 6 'Structure model' '_software.contact_author_email' 6 6 'Structure model' '_software.language' 7 6 'Structure model' '_software.location' 8 6 'Structure model' '_software.name' 9 6 'Structure model' '_software.type' 10 6 'Structure model' '_software.version' 11 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 7 'Structure model' '_database_2.pdbx_DOI' 13 7 'Structure model' '_database_2.pdbx_database_accession' 14 7 'Structure model' '_struct_ref_seq_dif.details' 15 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 7 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 58.5910 14.9110 4.0960 -0.1143 -0.0937 -0.0547 0.0390 0.0141 0.0394 1.7551 3.3636 1.0186 -1.5802 -0.3702 -0.6308 -0.0557 0.0371 0.0186 -0.1515 -0.3282 -0.1064 -0.0296 0.0192 -0.0547 'X-RAY DIFFRACTION' 2 ? refined 49.9880 35.0590 9.1970 0.0233 0.0052 -0.1900 0.1098 -0.0062 -0.0019 2.2009 4.6173 0.5817 -1.9071 -0.3934 0.1757 -0.1381 0.1663 -0.0282 -0.3411 0.0468 -0.1089 0.4680 -0.1431 -0.1291 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 6 A 138 ? A 5 A 137 'X-RAY DIFFRACTION' ? 2 2 B 6 B 136 ? B 5 B 135 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 3.00 'March. 27, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; 999 ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 13 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 13 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 A _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 13 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 A _pdbx_validate_rmsd_angle.angle_value 81.54 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation -17.36 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 123 ? ? -112.28 -92.66 2 1 THR B 123 ? ? -115.10 -102.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 7 ? CD1 ? A LEU 8 CD1 2 1 Y 1 A LEU 7 ? CD2 ? A LEU 8 CD2 3 1 Y 1 A ASP 28 ? CG ? A ASP 29 CG 4 1 Y 1 A ASP 28 ? OD1 ? A ASP 29 OD1 5 1 Y 1 A ASP 28 ? OD2 ? A ASP 29 OD2 6 1 Y 1 A ASN 29 ? CG ? A ASN 30 CG 7 1 Y 1 A ASN 29 ? OD1 ? A ASN 30 OD1 8 1 Y 1 A ASN 29 ? ND2 ? A ASN 30 ND2 9 1 Y 1 A ASP 78 ? CG ? A ASP 79 CG 10 1 Y 1 A ASP 78 ? OD1 ? A ASP 79 OD1 11 1 Y 1 A ASP 78 ? OD2 ? A ASP 79 OD2 12 1 Y 1 A LYS 80 ? CE ? A LYS 81 CE 13 1 Y 1 A LYS 80 ? NZ ? A LYS 81 NZ 14 1 Y 1 A GLU 104 ? CD ? A GLU 105 CD 15 1 Y 1 A GLU 104 ? OE1 ? A GLU 105 OE1 16 1 Y 1 A GLU 104 ? OE2 ? A GLU 105 OE2 17 1 Y 1 A LYS 117 ? CE ? A LYS 118 CE 18 1 Y 1 A LYS 117 ? NZ ? A LYS 118 NZ 19 1 Y 1 A SER 137 ? OG ? A SER 138 OG 20 1 Y 1 B LYS 6 ? CG ? B LYS 7 CG 21 1 Y 1 B LYS 6 ? CD ? B LYS 7 CD 22 1 Y 1 B LYS 6 ? CE ? B LYS 7 CE 23 1 Y 1 B LYS 6 ? NZ ? B LYS 7 NZ 24 1 Y 1 B GLN 8 ? CG ? B GLN 9 CG 25 1 Y 1 B GLN 8 ? CD ? B GLN 9 CD 26 1 Y 1 B GLN 8 ? OE1 ? B GLN 9 OE1 27 1 Y 1 B GLN 8 ? NE2 ? B GLN 9 NE2 28 1 Y 1 B ASP 28 ? CG ? B ASP 29 CG 29 1 Y 1 B ASP 28 ? OD1 ? B ASP 29 OD1 30 1 Y 1 B ASP 28 ? OD2 ? B ASP 29 OD2 31 1 Y 1 B GLN 47 ? CD ? B GLN 48 CD 32 1 Y 1 B GLN 47 ? OE1 ? B GLN 48 OE1 33 1 Y 1 B GLN 47 ? NE2 ? B GLN 48 NE2 34 1 Y 1 B LYS 79 ? CE ? B LYS 80 CE 35 1 Y 1 B LYS 79 ? NZ ? B LYS 80 NZ 36 1 Y 1 B LYS 80 ? CE ? B LYS 81 CE 37 1 Y 1 B LYS 80 ? NZ ? B LYS 81 NZ 38 1 Y 1 B GLU 104 ? CD ? B GLU 105 CD 39 1 Y 1 B GLU 104 ? OE1 ? B GLU 105 OE1 40 1 Y 1 B GLU 104 ? OE2 ? B GLU 105 OE2 41 1 Y 1 B LYS 117 ? CE ? B LYS 118 CE 42 1 Y 1 B LYS 117 ? NZ ? B LYS 118 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ASP 2 ? A ASP 3 4 1 Y 1 A MSE 3 ? A MSE 4 5 1 Y 1 A LYS 4 ? A LYS 5 6 1 Y 1 B GLY 0 ? B GLY 1 7 1 Y 1 B MSE 1 ? B MSE 2 8 1 Y 1 B ASP 2 ? B ASP 3 9 1 Y 1 B MSE 3 ? B MSE 4 10 1 Y 1 B LYS 4 ? B LYS 5 11 1 Y 1 B ASP 136 ? B ASP 137 12 1 Y 1 B SER 137 ? B SER 138 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #