HEADER TRANSFERASE 22-MAY-07 2Q0N TITLE STRUCTURE OF HUMAN P21 ACTIVATING KINASE 4 (PAK4) IN COMPLEX WITH A TITLE 2 CONSENSUS PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 291-591; COMPND 5 SYNONYM: P21-ACTIVATED KINASE 4, PAK-4; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SYNTHETIC PEPTIDE; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAK4, KIAA1142; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS PROTEIN KINASE, PHOSPHORYLATION, NUCLEOTIDE-BINDING, PAK4, STE20, KEYWDS 2 KINASE, TRANSFERASE, ATP-BINDING, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 3 STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,J.ESWARAN,A.TURNBULL,E.PAPAGRIGORIOU,A.W.PIKE,F.VON AUTHOR 2 DELFT,M.SUNDSTROM,A.EDWARDS,C.H.ARROWSMITH,J.WEIGELT,S.KNAPP, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 6 30-AUG-23 2Q0N 1 REMARK SEQADV LINK REVDAT 5 31-JAN-18 2Q0N 1 AUTHOR JRNL REVDAT 4 18-OCT-17 2Q0N 1 REMARK REVDAT 3 13-JUL-11 2Q0N 1 VERSN REVDAT 2 24-FEB-09 2Q0N 1 VERSN REVDAT 1 26-JUN-07 2Q0N 0 JRNL AUTH P.FILIPPAKOPOULOS,J.ESWARAN,A.TURNBULL,E.PAPAGRIGORIOU, JRNL AUTH 2 A.W.PIKE,F.VON DELFT,M.SUNDSTROM,A.EDWARDS,C.H.ARROWSMITH, JRNL AUTH 3 J.WEIGELT,S.KNAPP JRNL TITL STRUCTURE OF HUMAN P21 ACTIVATING KINASE 4 (PAK4) IN COMPLEX JRNL TITL 2 WITH A CONSENSUS PEPTIDE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 40359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2020 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2792 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 159 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2379 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.105 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.673 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2523 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1755 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3425 ; 1.588 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4272 ; 1.011 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 325 ; 5.729 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;32.147 ;23.084 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 433 ;12.871 ;15.035 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;19.773 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 387 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2782 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 504 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 498 ; 0.229 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1906 ; 0.207 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1205 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1266 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 163 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.134 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 70 ; 0.298 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1712 ; 1.102 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 619 ; 0.294 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2535 ; 1.450 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1036 ; 2.308 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 880 ; 3.182 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 298 A 312 REMARK 3 ORIGIN FOR THE GROUP (A): -65.7680 24.2970 -22.6970 REMARK 3 T TENSOR REMARK 3 T11: -0.1931 T22: 0.0381 REMARK 3 T33: -0.0818 T12: 0.0411 REMARK 3 T13: -0.0389 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 7.0806 L22: 10.4067 REMARK 3 L33: 13.7187 L12: -1.4004 REMARK 3 L13: 0.2770 L23: 7.8267 REMARK 3 S TENSOR REMARK 3 S11: 0.1060 S12: 0.6041 S13: -0.1796 REMARK 3 S21: -0.0544 S22: -0.2895 S23: 0.2609 REMARK 3 S31: 0.3920 S32: 0.1361 S33: 0.1835 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 313 A 333 REMARK 3 ORIGIN FOR THE GROUP (A): -52.9400 38.2740 -17.4100 REMARK 3 T TENSOR REMARK 3 T11: -0.1008 T22: -0.0684 REMARK 3 T33: -0.0300 T12: -0.0011 REMARK 3 T13: -0.0026 T23: 0.0697 REMARK 3 L TENSOR REMARK 3 L11: 15.8647 L22: 0.4782 REMARK 3 L33: 4.1101 L12: 1.7665 REMARK 3 L13: 1.2705 L23: 0.9687 REMARK 3 S TENSOR REMARK 3 S11: 0.1349 S12: 0.4484 S13: 0.4019 REMARK 3 S21: -0.1105 S22: -0.0103 S23: 0.1795 REMARK 3 S31: -0.3964 S32: 0.1672 S33: -0.1246 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 334 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): -55.7410 29.8580 -13.9780 REMARK 3 T TENSOR REMARK 3 T11: -0.1550 T22: -0.0136 REMARK 3 T33: -0.0457 T12: 0.0371 REMARK 3 T13: -0.0308 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.2671 L22: 2.4377 REMARK 3 L33: 3.1947 L12: 0.2914 REMARK 3 L13: 0.4807 L23: 0.0434 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.0451 S13: 0.1793 REMARK 3 S21: -0.0850 S22: 0.0554 S23: 0.1417 REMARK 3 S31: -0.0938 S32: 0.0028 S33: -0.0865 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 375 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): -48.6160 21.1320 -5.2760 REMARK 3 T TENSOR REMARK 3 T11: -0.1016 T22: -0.0754 REMARK 3 T33: -0.0921 T12: -0.0062 REMARK 3 T13: -0.0067 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.0690 L22: 1.5988 REMARK 3 L33: 0.9006 L12: -0.1862 REMARK 3 L13: 0.1669 L23: -0.4776 REMARK 3 S TENSOR REMARK 3 S11: 0.0522 S12: -0.0534 S13: -0.0403 REMARK 3 S21: -0.0480 S22: -0.0381 S23: 0.0537 REMARK 3 S31: 0.0562 S32: -0.1512 S33: -0.0142 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 504 A 591 REMARK 3 ORIGIN FOR THE GROUP (A): -36.8100 14.4770 0.1920 REMARK 3 T TENSOR REMARK 3 T11: -0.1062 T22: -0.1058 REMARK 3 T33: 0.0092 T12: 0.0029 REMARK 3 T13: -0.0243 T23: 0.0481 REMARK 3 L TENSOR REMARK 3 L11: 0.5979 L22: 3.0356 REMARK 3 L33: 1.0729 L12: 0.8161 REMARK 3 L13: -0.0451 L23: 0.0898 REMARK 3 S TENSOR REMARK 3 S11: 0.0889 S12: -0.1406 S13: -0.2201 REMARK 3 S21: 0.0335 S22: -0.0961 S23: -0.5191 REMARK 3 S31: 0.1253 S32: 0.0749 S33: 0.0071 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Q0N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000043000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97910 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40410 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2J0I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7M AMMONIUM SULFATE, 15% PEG400, 1M REMARK 280 TRIS-HCL PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.78850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 72.83900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 72.83900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.68275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 72.83900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 72.83900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.89425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 72.83900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 72.83900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.68275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 72.83900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.83900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.89425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 19.78850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 111 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 291 REMARK 465 PRO A 292 REMARK 465 GLN A 293 REMARK 465 ARG A 294 REMARK 465 GLU A 295 REMARK 465 PRO A 296 REMARK 465 GLN A 297 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 319 OG REMARK 470 TYR A 320 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 341 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 GLN A 358 CG CD OE1 NE2 REMARK 470 GLU A 361 CG CD OE1 OE2 REMARK 470 GLU A 376 CD OE1 OE2 REMARK 470 ARG A 411 CD NE CZ NH1 NH2 REMARK 470 LYS A 467 CG CD CE NZ REMARK 470 GLU A 468 CG CD OE1 OE2 REMARK 470 LYS A 473 CD CE NZ REMARK 470 ARG A 489 NE CZ NH1 NH2 REMARK 470 LYS A 522 NZ REMARK 470 ARG A 534 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 536 CG CD CE NZ REMARK 470 LYS A 540 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 540 CB REMARK 480 ARG A 589 NE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 589 CD ARG A 589 NE -0.214 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 560 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 589 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B -5 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 440 46.89 -147.54 REMARK 500 ASN A 537 40.96 -97.73 REMARK 500 THR A 590 -167.23 -101.00 REMARK 500 ASP B 4 148.71 176.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 592 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 593 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 594 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 595 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 596 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 597 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 598 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 599 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2J0I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN P21 ACTIVATING KINASE 4 (PAK4) DBREF 2Q0N A 291 591 UNP O96013 PAK4_HUMAN 291 591 DBREF 2Q0N B -5 5 PDB 2Q0N 2Q0N -5 5 SEQADV 2Q0N SEP A 474 UNP O96013 SER 474 MODIFIED RESIDUE SEQRES 1 A 301 SER PRO GLN ARG GLU PRO GLN ARG VAL SER HIS GLU GLN SEQRES 2 A 301 PHE ARG ALA ALA LEU GLN LEU VAL VAL ASP PRO GLY ASP SEQRES 3 A 301 PRO ARG SER TYR LEU ASP ASN PHE ILE LYS ILE GLY GLU SEQRES 4 A 301 GLY SER THR GLY ILE VAL CYS ILE ALA THR VAL ARG SER SEQRES 5 A 301 SER GLY LYS LEU VAL ALA VAL LYS LYS MET ASP LEU ARG SEQRES 6 A 301 LYS GLN GLN ARG ARG GLU LEU LEU PHE ASN GLU VAL VAL SEQRES 7 A 301 ILE MET ARG ASP TYR GLN HIS GLU ASN VAL VAL GLU MET SEQRES 8 A 301 TYR ASN SER TYR LEU VAL GLY ASP GLU LEU TRP VAL VAL SEQRES 9 A 301 MET GLU PHE LEU GLU GLY GLY ALA LEU THR ASP ILE VAL SEQRES 10 A 301 THR HIS THR ARG MET ASN GLU GLU GLN ILE ALA ALA VAL SEQRES 11 A 301 CYS LEU ALA VAL LEU GLN ALA LEU SER VAL LEU HIS ALA SEQRES 12 A 301 GLN GLY VAL ILE HIS ARG ASP ILE LYS SER ASP SER ILE SEQRES 13 A 301 LEU LEU THR HIS ASP GLY ARG VAL LYS LEU SER ASP PHE SEQRES 14 A 301 GLY PHE CYS ALA GLN VAL SER LYS GLU VAL PRO ARG ARG SEQRES 15 A 301 LYS SEP LEU VAL GLY THR PRO TYR TRP MET ALA PRO GLU SEQRES 16 A 301 LEU ILE SER ARG LEU PRO TYR GLY PRO GLU VAL ASP ILE SEQRES 17 A 301 TRP SER LEU GLY ILE MET VAL ILE GLU MET VAL ASP GLY SEQRES 18 A 301 GLU PRO PRO TYR PHE ASN GLU PRO PRO LEU LYS ALA MET SEQRES 19 A 301 LYS MET ILE ARG ASP ASN LEU PRO PRO ARG LEU LYS ASN SEQRES 20 A 301 LEU HIS LYS VAL SER PRO SER LEU LYS GLY PHE LEU ASP SEQRES 21 A 301 ARG LEU LEU VAL ARG ASP PRO ALA GLN ARG ALA THR ALA SEQRES 22 A 301 ALA GLU LEU LEU LYS HIS PRO PHE LEU ALA LYS ALA GLY SEQRES 23 A 301 PRO PRO ALA SER ILE VAL PRO LEU MET ARG GLN ASN ARG SEQRES 24 A 301 THR ARG SEQRES 1 B 11 ARG ARG ARG ARG ARG SER TRP TYR PHE ASP GLY MODRES 2Q0N SEP A 474 SER PHOSPHOSERINE HET SEP A 474 10 HET SO4 A 592 5 HET EDO A 593 4 HET EDO A 594 4 HET EDO A 595 4 HET EDO A 596 4 HET EDO A 597 4 HET EDO A 598 4 HET EDO A 599 4 HET EDO B 403 4 HETNAM SEP PHOSPHOSERINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN SEP PHOSPHONOSERINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 SO4 O4 S 2- FORMUL 4 EDO 8(C2 H6 O2) FORMUL 12 HOH *251(H2 O) HELIX 1 1 SER A 300 VAL A 312 1 13 HELIX 2 2 ASP A 316 SER A 319 5 4 HELIX 3 3 ARG A 355 GLN A 357 5 3 HELIX 4 4 ARG A 360 TYR A 373 1 14 HELIX 5 5 LEU A 403 THR A 408 1 6 HELIX 6 6 ASN A 413 GLN A 434 1 22 HELIX 7 7 LYS A 442 ASP A 444 5 3 HELIX 8 8 THR A 478 MET A 482 5 5 HELIX 9 9 ALA A 483 SER A 488 1 6 HELIX 10 10 PRO A 494 GLY A 511 1 18 HELIX 11 11 PRO A 519 ASN A 530 1 12 HELIX 12 12 ASN A 537 VAL A 541 5 5 HELIX 13 13 SER A 542 LEU A 553 1 12 HELIX 14 14 THR A 562 LEU A 567 1 6 HELIX 15 15 LYS A 568 ALA A 575 5 8 HELIX 16 16 PRO A 577 MET A 585 5 9 SHEET 1 A 5 LEU A 321 GLU A 329 0 SHEET 2 A 5 ILE A 334 VAL A 340 -1 O VAL A 335 N ILE A 327 SHEET 3 A 5 LEU A 346 ASP A 353 -1 O VAL A 349 N CYS A 336 SHEET 4 A 5 GLU A 390 GLU A 396 -1 O LEU A 391 N MET A 352 SHEET 5 A 5 MET A 381 VAL A 387 -1 N ASN A 383 O VAL A 394 SHEET 1 B 3 GLY A 401 ALA A 402 0 SHEET 2 B 3 ILE A 446 LEU A 448 -1 O LEU A 448 N GLY A 401 SHEET 3 B 3 VAL A 454 LEU A 456 -1 O LYS A 455 N LEU A 447 SHEET 1 C 2 VAL A 436 ILE A 437 0 SHEET 2 C 2 ALA A 463 GLN A 464 -1 O ALA A 463 N ILE A 437 SHEET 1 D 2 LEU A 475 GLY A 477 0 SHEET 2 D 2 TRP B 1 ASP B 4 -1 O TRP B 1 N GLY A 477 LINK C LYS A 473 N SEP A 474 1555 1555 1.33 LINK C SEP A 474 N LEU A 475 1555 1555 1.33 SITE 1 AC1 4 ARG A 298 ARG A 359 ARG A 360 GLU A 361 SITE 1 AC2 6 HOH A 70 ARG A 359 LEU A 362 ASN A 365 SITE 2 AC2 6 ARG A 439 SEP A 474 SITE 1 AC3 2 ASN A 413 GLU A 414 SITE 1 AC4 4 LYS A 574 ARG A 591 ARG B -5 ARG B -3 SITE 1 AC5 4 LEU A 475 LEU A 521 ARG A 528 EDO A 596 SITE 1 AC6 2 ARG A 528 EDO A 595 SITE 1 AC7 5 HOH A 265 GLU A 396 PHE A 397 LEU A 398 SITE 2 AC7 5 GLY A 401 SITE 1 AC8 4 HOH A 273 HOH A 275 GLU A 399 GLN A 587 SITE 1 AC9 3 VAL A 407 HIS A 409 THR A 410 CRYST1 145.678 145.678 39.577 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006864 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025267 0.00000