data_2Q2T # _entry.id 2Q2T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Q2T pdb_00002q2t 10.2210/pdb2q2t/pdb NDB PD1017 ? ? RCSB RCSB043077 ? ? WWPDB D_1000043077 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-10 2 'Structure model' 1 1 2007-10-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2Q2T _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1FVI . unspecified PDB 2Q2U . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lima, C.D.' 1 'Nandakumar, J.' 2 'Nair, P.A.' 3 'Smith, P.' 4 'Shuman, S.' 5 # _citation.id primary _citation.title 'Structural basis for nick recognition by a minimal pluripotent DNA ligase.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 14 _citation.page_first 770 _citation.page_last 778 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17618295 _citation.pdbx_database_id_DOI 10.1038/nsmb1266 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nair, P.A.' 1 ? primary 'Nandakumar, J.' 2 ? primary 'Smith, P.' 3 ? primary 'Odell, M.' 4 ? primary 'Lima, C.D.' 5 ? primary 'Shuman, S.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'" 6494.194 1 ? ? ? ? 2 polymer syn "5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*(OMC)P*C)-3'" 3035.007 1 ? ? ? ? 3 polymer syn "5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3'" 3342.212 1 ? ? ? ? 4 polymer man 'Chlorella virus DNA ligase' 36833.117 1 ? ? ? ? 5 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 6 water nat water 18.015 145 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DT)(DT)(DC)(DC)(DG)(DA)(DT)(DA)(DG)(DT)(DG)(DG)(DG)(DG)(DT)(DC)(DG)(DC)(DA)(DA) (DT) ; TTCCGATAGTGGGGTCGCAAT B ? 2 'polydeoxyribonucleotide/polyribonucleotide hybrid' no yes '(DA)(DT)(DT)(DG)(DC)(DG)(DA)(DC)(OMC)(DC)' ATTGCGACCC C ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DT)(DA)(DT)(DC)(DG)(DG)(DA)(DA)' CACTATCGGAA D ? 4 'polypeptide(L)' no no ;MGHHHHHHHHHHSSGHIEGRHMAITKPLLAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSVMNRLLTEL LPEGSDGEISIEGATFQDTTSAVMTGHKMYNAKFSYYWFDYVTDDPLKKYIDRVEDMKNYITVHPHILEHAQVKIIPLIP VEINNITELLQYERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQFKDAEATIISMTALFKNTNTKTKDNFGYSK RSTHKSGKVEEDVMGSIEVDYDGVVFSIGTGFDADQRRDFWQNKESYIGKMVKFKYFEMGSKDCPRFPVFIGIRHEEDR ; ;MGHHHHHHHHHHSSGHIEGRHMAITKPLLAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSVMNRLLTEL LPEGSDGEISIEGATFQDTTSAVMTGHKMYNAKFSYYWFDYVTDDPLKKYIDRVEDMKNYITVHPHILEHAQVKIIPLIP VEINNITELLQYERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQFKDAEATIISMTALFKNTNTKTKDNFGYSK RSTHKSGKVEEDVMGSIEVDYDGVVFSIGTGFDADQRRDFWQNKESYIGKMVKFKYFEMGSKDCPRFPVFIGIRHEEDR ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'ADENOSINE MONOPHOSPHATE' AMP 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DC n 1 4 DC n 1 5 DG n 1 6 DA n 1 7 DT n 1 8 DA n 1 9 DG n 1 10 DT n 1 11 DG n 1 12 DG n 1 13 DG n 1 14 DG n 1 15 DT n 1 16 DC n 1 17 DG n 1 18 DC n 1 19 DA n 1 20 DA n 1 21 DT n 2 1 DA n 2 2 DT n 2 3 DT n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DA n 2 8 DC n 2 9 OMC n 2 10 DC n 3 1 DC n 3 2 DA n 3 3 DC n 3 4 DT n 3 5 DA n 3 6 DT n 3 7 DC n 3 8 DG n 3 9 DG n 3 10 DA n 3 11 DA n 4 1 MET n 4 2 GLY n 4 3 HIS n 4 4 HIS n 4 5 HIS n 4 6 HIS n 4 7 HIS n 4 8 HIS n 4 9 HIS n 4 10 HIS n 4 11 HIS n 4 12 HIS n 4 13 SER n 4 14 SER n 4 15 GLY n 4 16 HIS n 4 17 ILE n 4 18 GLU n 4 19 GLY n 4 20 ARG n 4 21 HIS n 4 22 MET n 4 23 ALA n 4 24 ILE n 4 25 THR n 4 26 LYS n 4 27 PRO n 4 28 LEU n 4 29 LEU n 4 30 ALA n 4 31 ALA n 4 32 THR n 4 33 LEU n 4 34 GLU n 4 35 ASN n 4 36 ILE n 4 37 GLU n 4 38 ASP n 4 39 VAL n 4 40 GLN n 4 41 PHE n 4 42 PRO n 4 43 CYS n 4 44 LEU n 4 45 ALA n 4 46 THR n 4 47 PRO n 4 48 LYS n 4 49 ILE n 4 50 ASP n 4 51 GLY n 4 52 ILE n 4 53 ARG n 4 54 SER n 4 55 VAL n 4 56 LYS n 4 57 GLN n 4 58 THR n 4 59 GLN n 4 60 MET n 4 61 LEU n 4 62 SER n 4 63 ARG n 4 64 THR n 4 65 PHE n 4 66 LYS n 4 67 PRO n 4 68 ILE n 4 69 ARG n 4 70 ASN n 4 71 SER n 4 72 VAL n 4 73 MET n 4 74 ASN n 4 75 ARG n 4 76 LEU n 4 77 LEU n 4 78 THR n 4 79 GLU n 4 80 LEU n 4 81 LEU n 4 82 PRO n 4 83 GLU n 4 84 GLY n 4 85 SER n 4 86 ASP n 4 87 GLY n 4 88 GLU n 4 89 ILE n 4 90 SER n 4 91 ILE n 4 92 GLU n 4 93 GLY n 4 94 ALA n 4 95 THR n 4 96 PHE n 4 97 GLN n 4 98 ASP n 4 99 THR n 4 100 THR n 4 101 SER n 4 102 ALA n 4 103 VAL n 4 104 MET n 4 105 THR n 4 106 GLY n 4 107 HIS n 4 108 LYS n 4 109 MET n 4 110 TYR n 4 111 ASN n 4 112 ALA n 4 113 LYS n 4 114 PHE n 4 115 SER n 4 116 TYR n 4 117 TYR n 4 118 TRP n 4 119 PHE n 4 120 ASP n 4 121 TYR n 4 122 VAL n 4 123 THR n 4 124 ASP n 4 125 ASP n 4 126 PRO n 4 127 LEU n 4 128 LYS n 4 129 LYS n 4 130 TYR n 4 131 ILE n 4 132 ASP n 4 133 ARG n 4 134 VAL n 4 135 GLU n 4 136 ASP n 4 137 MET n 4 138 LYS n 4 139 ASN n 4 140 TYR n 4 141 ILE n 4 142 THR n 4 143 VAL n 4 144 HIS n 4 145 PRO n 4 146 HIS n 4 147 ILE n 4 148 LEU n 4 149 GLU n 4 150 HIS n 4 151 ALA n 4 152 GLN n 4 153 VAL n 4 154 LYS n 4 155 ILE n 4 156 ILE n 4 157 PRO n 4 158 LEU n 4 159 ILE n 4 160 PRO n 4 161 VAL n 4 162 GLU n 4 163 ILE n 4 164 ASN n 4 165 ASN n 4 166 ILE n 4 167 THR n 4 168 GLU n 4 169 LEU n 4 170 LEU n 4 171 GLN n 4 172 TYR n 4 173 GLU n 4 174 ARG n 4 175 ASP n 4 176 VAL n 4 177 LEU n 4 178 SER n 4 179 LYS n 4 180 GLY n 4 181 PHE n 4 182 GLU n 4 183 GLY n 4 184 VAL n 4 185 MET n 4 186 ILE n 4 187 ARG n 4 188 LYS n 4 189 PRO n 4 190 ASP n 4 191 GLY n 4 192 LYS n 4 193 TYR n 4 194 LYS n 4 195 PHE n 4 196 GLY n 4 197 ARG n 4 198 SER n 4 199 THR n 4 200 LEU n 4 201 LYS n 4 202 GLU n 4 203 GLY n 4 204 ILE n 4 205 LEU n 4 206 LEU n 4 207 LYS n 4 208 MET n 4 209 LYS n 4 210 GLN n 4 211 PHE n 4 212 LYS n 4 213 ASP n 4 214 ALA n 4 215 GLU n 4 216 ALA n 4 217 THR n 4 218 ILE n 4 219 ILE n 4 220 SER n 4 221 MET n 4 222 THR n 4 223 ALA n 4 224 LEU n 4 225 PHE n 4 226 LYS n 4 227 ASN n 4 228 THR n 4 229 ASN n 4 230 THR n 4 231 LYS n 4 232 THR n 4 233 LYS n 4 234 ASP n 4 235 ASN n 4 236 PHE n 4 237 GLY n 4 238 TYR n 4 239 SER n 4 240 LYS n 4 241 ARG n 4 242 SER n 4 243 THR n 4 244 HIS n 4 245 LYS n 4 246 SER n 4 247 GLY n 4 248 LYS n 4 249 VAL n 4 250 GLU n 4 251 GLU n 4 252 ASP n 4 253 VAL n 4 254 MET n 4 255 GLY n 4 256 SER n 4 257 ILE n 4 258 GLU n 4 259 VAL n 4 260 ASP n 4 261 TYR n 4 262 ASP n 4 263 GLY n 4 264 VAL n 4 265 VAL n 4 266 PHE n 4 267 SER n 4 268 ILE n 4 269 GLY n 4 270 THR n 4 271 GLY n 4 272 PHE n 4 273 ASP n 4 274 ALA n 4 275 ASP n 4 276 GLN n 4 277 ARG n 4 278 ARG n 4 279 ASP n 4 280 PHE n 4 281 TRP n 4 282 GLN n 4 283 ASN n 4 284 LYS n 4 285 GLU n 4 286 SER n 4 287 TYR n 4 288 ILE n 4 289 GLY n 4 290 LYS n 4 291 MET n 4 292 VAL n 4 293 LYS n 4 294 PHE n 4 295 LYS n 4 296 TYR n 4 297 PHE n 4 298 GLU n 4 299 MET n 4 300 GLY n 4 301 SER n 4 302 LYS n 4 303 ASP n 4 304 CYS n 4 305 PRO n 4 306 ARG n 4 307 PHE n 4 308 PRO n 4 309 VAL n 4 310 PHE n 4 311 ILE n 4 312 GLY n 4 313 ILE n 4 314 ARG n 4 315 HIS n 4 316 GLU n 4 317 GLU n 4 318 ASP n 4 319 ARG n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Chlorovirus _entity_src_gen.pdbx_gene_src_gene A544R _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Chlorella virus' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Paramecium bursaria Chlorella virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10506 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET16B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'Chemically synthesized.' 2 1 sample ? ? ? ? ? 'Chemically synthesized.' 3 1 sample ? ? ? ? ? 'Chemically synthesized.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OMC 'RNA linking' n "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T B . n A 1 2 DT 2 2 2 DT T B . n A 1 3 DC 3 3 3 DC C B . n A 1 4 DC 4 4 4 DC C B . n A 1 5 DG 5 5 5 DG G B . n A 1 6 DA 6 6 6 DA A B . n A 1 7 DT 7 7 7 DT T B . n A 1 8 DA 8 8 8 DA A B . n A 1 9 DG 9 9 9 DG G B . n A 1 10 DT 10 10 10 DT T B . n A 1 11 DG 11 11 11 DG G B . n A 1 12 DG 12 12 12 DG G B . n A 1 13 DG 13 13 13 DG G B . n A 1 14 DG 14 14 14 DG G B . n A 1 15 DT 15 15 15 DT T B . n A 1 16 DC 16 16 16 DC C B . n A 1 17 DG 17 17 17 DG G B . n A 1 18 DC 18 18 18 DC C B . n A 1 19 DA 19 19 19 DA A B . n A 1 20 DA 20 20 20 DA A B . n A 1 21 DT 21 21 21 DT T B . n B 2 1 DA 1 22 22 DA A C . n B 2 2 DT 2 23 23 DT T C . n B 2 3 DT 3 24 24 DT T C . n B 2 4 DG 4 25 25 DG G C . n B 2 5 DC 5 26 26 DC C C . n B 2 6 DG 6 27 27 DG G C . n B 2 7 DA 7 28 28 DA A C . n B 2 8 DC 8 29 29 DC C C . n B 2 9 OMC 9 30 30 OMC OMC C . n B 2 10 DC 10 31 31 DC C C . n C 3 1 DC 1 32 32 DC C D . n C 3 2 DA 2 33 33 DA A D . n C 3 3 DC 3 34 34 DC C D . n C 3 4 DT 4 35 35 DT T D . n C 3 5 DA 5 36 36 DA A D . n C 3 6 DT 6 37 37 DT T D . n C 3 7 DC 7 38 38 DC C D . n C 3 8 DG 8 39 39 DG G D . n C 3 9 DG 9 40 40 DG G D . n C 3 10 DA 10 41 41 DA A D . n C 3 11 DA 11 42 42 DA A D . n D 4 1 MET 1 -20 ? ? ? A . n D 4 2 GLY 2 -19 ? ? ? A . n D 4 3 HIS 3 -18 ? ? ? A . n D 4 4 HIS 4 -17 ? ? ? A . n D 4 5 HIS 5 -16 ? ? ? A . n D 4 6 HIS 6 -15 ? ? ? A . n D 4 7 HIS 7 -14 ? ? ? A . n D 4 8 HIS 8 -13 ? ? ? A . n D 4 9 HIS 9 -12 ? ? ? A . n D 4 10 HIS 10 -11 ? ? ? A . n D 4 11 HIS 11 -10 ? ? ? A . n D 4 12 HIS 12 -9 ? ? ? A . n D 4 13 SER 13 -8 ? ? ? A . n D 4 14 SER 14 -7 ? ? ? A . n D 4 15 GLY 15 -6 ? ? ? A . n D 4 16 HIS 16 -5 ? ? ? A . n D 4 17 ILE 17 -4 ? ? ? A . n D 4 18 GLU 18 -3 ? ? ? A . n D 4 19 GLY 19 -2 ? ? ? A . n D 4 20 ARG 20 -1 ? ? ? A . n D 4 21 HIS 21 0 ? ? ? A . n D 4 22 MET 22 1 1 MET MET A . n D 4 23 ALA 23 2 2 ALA ALA A . n D 4 24 ILE 24 3 3 ILE ILE A . n D 4 25 THR 25 4 4 THR THR A . n D 4 26 LYS 26 5 5 LYS LYS A . n D 4 27 PRO 27 6 6 PRO PRO A . n D 4 28 LEU 28 7 7 LEU LEU A . n D 4 29 LEU 29 8 8 LEU LEU A . n D 4 30 ALA 30 9 9 ALA ALA A . n D 4 31 ALA 31 10 10 ALA ALA A . n D 4 32 THR 32 11 11 THR THR A . n D 4 33 LEU 33 12 12 LEU LEU A . n D 4 34 GLU 34 13 13 GLU GLU A . n D 4 35 ASN 35 14 14 ASN ASN A . n D 4 36 ILE 36 15 15 ILE ILE A . n D 4 37 GLU 37 16 16 GLU GLU A . n D 4 38 ASP 38 17 17 ASP ASP A . n D 4 39 VAL 39 18 18 VAL VAL A . n D 4 40 GLN 40 19 19 GLN GLN A . n D 4 41 PHE 41 20 20 PHE PHE A . n D 4 42 PRO 42 21 21 PRO PRO A . n D 4 43 CYS 43 22 22 CYS CYS A . n D 4 44 LEU 44 23 23 LEU LEU A . n D 4 45 ALA 45 24 24 ALA ALA A . n D 4 46 THR 46 25 25 THR THR A . n D 4 47 PRO 47 26 26 PRO PRO A . n D 4 48 LYS 48 27 27 LYS LYS A . n D 4 49 ILE 49 28 28 ILE ILE A . n D 4 50 ASP 50 29 29 ASP ASP A . n D 4 51 GLY 51 30 30 GLY GLY A . n D 4 52 ILE 52 31 31 ILE ILE A . n D 4 53 ARG 53 32 32 ARG ARG A . n D 4 54 SER 54 33 33 SER SER A . n D 4 55 VAL 55 34 34 VAL VAL A . n D 4 56 LYS 56 35 35 LYS LYS A . n D 4 57 GLN 57 36 36 GLN GLN A . n D 4 58 THR 58 37 37 THR THR A . n D 4 59 GLN 59 38 38 GLN GLN A . n D 4 60 MET 60 39 39 MET MET A . n D 4 61 LEU 61 40 40 LEU LEU A . n D 4 62 SER 62 41 41 SER SER A . n D 4 63 ARG 63 42 42 ARG ARG A . n D 4 64 THR 64 43 43 THR THR A . n D 4 65 PHE 65 44 44 PHE PHE A . n D 4 66 LYS 66 45 45 LYS LYS A . n D 4 67 PRO 67 46 46 PRO PRO A . n D 4 68 ILE 68 47 47 ILE ILE A . n D 4 69 ARG 69 48 48 ARG ARG A . n D 4 70 ASN 70 49 49 ASN ASN A . n D 4 71 SER 71 50 50 SER SER A . n D 4 72 VAL 72 51 51 VAL VAL A . n D 4 73 MET 73 52 52 MET MET A . n D 4 74 ASN 74 53 53 ASN ASN A . n D 4 75 ARG 75 54 54 ARG ARG A . n D 4 76 LEU 76 55 55 LEU LEU A . n D 4 77 LEU 77 56 56 LEU LEU A . n D 4 78 THR 78 57 57 THR THR A . n D 4 79 GLU 79 58 58 GLU GLU A . n D 4 80 LEU 80 59 59 LEU LEU A . n D 4 81 LEU 81 60 60 LEU LEU A . n D 4 82 PRO 82 61 61 PRO PRO A . n D 4 83 GLU 83 62 62 GLU GLU A . n D 4 84 GLY 84 63 63 GLY GLY A . n D 4 85 SER 85 64 64 SER SER A . n D 4 86 ASP 86 65 65 ASP ASP A . n D 4 87 GLY 87 66 66 GLY GLY A . n D 4 88 GLU 88 67 67 GLU GLU A . n D 4 89 ILE 89 68 68 ILE ILE A . n D 4 90 SER 90 69 69 SER SER A . n D 4 91 ILE 91 70 70 ILE ILE A . n D 4 92 GLU 92 71 71 GLU GLU A . n D 4 93 GLY 93 72 72 GLY GLY A . n D 4 94 ALA 94 73 73 ALA ALA A . n D 4 95 THR 95 74 74 THR THR A . n D 4 96 PHE 96 75 75 PHE PHE A . n D 4 97 GLN 97 76 76 GLN GLN A . n D 4 98 ASP 98 77 77 ASP ASP A . n D 4 99 THR 99 78 78 THR THR A . n D 4 100 THR 100 79 79 THR THR A . n D 4 101 SER 101 80 80 SER SER A . n D 4 102 ALA 102 81 81 ALA ALA A . n D 4 103 VAL 103 82 82 VAL VAL A . n D 4 104 MET 104 83 83 MET MET A . n D 4 105 THR 105 84 84 THR THR A . n D 4 106 GLY 106 85 85 GLY GLY A . n D 4 107 HIS 107 86 86 HIS HIS A . n D 4 108 LYS 108 87 87 LYS LYS A . n D 4 109 MET 109 88 88 MET MET A . n D 4 110 TYR 110 89 89 TYR TYR A . n D 4 111 ASN 111 90 90 ASN ASN A . n D 4 112 ALA 112 91 91 ALA ALA A . n D 4 113 LYS 113 92 92 LYS LYS A . n D 4 114 PHE 114 93 93 PHE PHE A . n D 4 115 SER 115 94 94 SER SER A . n D 4 116 TYR 116 95 95 TYR TYR A . n D 4 117 TYR 117 96 96 TYR TYR A . n D 4 118 TRP 118 97 97 TRP TRP A . n D 4 119 PHE 119 98 98 PHE PHE A . n D 4 120 ASP 120 99 99 ASP ASP A . n D 4 121 TYR 121 100 100 TYR TYR A . n D 4 122 VAL 122 101 101 VAL VAL A . n D 4 123 THR 123 102 102 THR THR A . n D 4 124 ASP 124 103 103 ASP ASP A . n D 4 125 ASP 125 104 104 ASP ASP A . n D 4 126 PRO 126 105 105 PRO PRO A . n D 4 127 LEU 127 106 106 LEU LEU A . n D 4 128 LYS 128 107 107 LYS LYS A . n D 4 129 LYS 129 108 108 LYS LYS A . n D 4 130 TYR 130 109 109 TYR TYR A . n D 4 131 ILE 131 110 110 ILE ILE A . n D 4 132 ASP 132 111 111 ASP ASP A . n D 4 133 ARG 133 112 112 ARG ARG A . n D 4 134 VAL 134 113 113 VAL VAL A . n D 4 135 GLU 135 114 114 GLU GLU A . n D 4 136 ASP 136 115 115 ASP ASP A . n D 4 137 MET 137 116 116 MET MET A . n D 4 138 LYS 138 117 117 LYS LYS A . n D 4 139 ASN 139 118 118 ASN ASN A . n D 4 140 TYR 140 119 119 TYR TYR A . n D 4 141 ILE 141 120 120 ILE ILE A . n D 4 142 THR 142 121 121 THR THR A . n D 4 143 VAL 143 122 122 VAL VAL A . n D 4 144 HIS 144 123 123 HIS HIS A . n D 4 145 PRO 145 124 124 PRO PRO A . n D 4 146 HIS 146 125 125 HIS HIS A . n D 4 147 ILE 147 126 126 ILE ILE A . n D 4 148 LEU 148 127 127 LEU LEU A . n D 4 149 GLU 149 128 128 GLU GLU A . n D 4 150 HIS 150 129 129 HIS HIS A . n D 4 151 ALA 151 130 130 ALA ALA A . n D 4 152 GLN 152 131 131 GLN GLN A . n D 4 153 VAL 153 132 132 VAL VAL A . n D 4 154 LYS 154 133 133 LYS LYS A . n D 4 155 ILE 155 134 134 ILE ILE A . n D 4 156 ILE 156 135 135 ILE ILE A . n D 4 157 PRO 157 136 136 PRO PRO A . n D 4 158 LEU 158 137 137 LEU LEU A . n D 4 159 ILE 159 138 138 ILE ILE A . n D 4 160 PRO 160 139 139 PRO PRO A . n D 4 161 VAL 161 140 140 VAL VAL A . n D 4 162 GLU 162 141 141 GLU GLU A . n D 4 163 ILE 163 142 142 ILE ILE A . n D 4 164 ASN 164 143 143 ASN ASN A . n D 4 165 ASN 165 144 144 ASN ASN A . n D 4 166 ILE 166 145 145 ILE ILE A . n D 4 167 THR 167 146 146 THR THR A . n D 4 168 GLU 168 147 147 GLU GLU A . n D 4 169 LEU 169 148 148 LEU LEU A . n D 4 170 LEU 170 149 149 LEU LEU A . n D 4 171 GLN 171 150 150 GLN GLN A . n D 4 172 TYR 172 151 151 TYR TYR A . n D 4 173 GLU 173 152 152 GLU GLU A . n D 4 174 ARG 174 153 153 ARG ARG A . n D 4 175 ASP 175 154 154 ASP ASP A . n D 4 176 VAL 176 155 155 VAL VAL A . n D 4 177 LEU 177 156 156 LEU LEU A . n D 4 178 SER 178 157 157 SER SER A . n D 4 179 LYS 179 158 158 LYS LYS A . n D 4 180 GLY 180 159 159 GLY GLY A . n D 4 181 PHE 181 160 160 PHE PHE A . n D 4 182 GLU 182 161 161 GLU GLU A . n D 4 183 GLY 183 162 162 GLY GLY A . n D 4 184 VAL 184 163 163 VAL VAL A . n D 4 185 MET 185 164 164 MET MET A . n D 4 186 ILE 186 165 165 ILE ILE A . n D 4 187 ARG 187 166 166 ARG ARG A . n D 4 188 LYS 188 167 167 LYS LYS A . n D 4 189 PRO 189 168 168 PRO PRO A . n D 4 190 ASP 190 169 169 ASP ASP A . n D 4 191 GLY 191 170 170 GLY GLY A . n D 4 192 LYS 192 171 171 LYS LYS A . n D 4 193 TYR 193 172 172 TYR TYR A . n D 4 194 LYS 194 173 173 LYS LYS A . n D 4 195 PHE 195 174 174 PHE PHE A . n D 4 196 GLY 196 175 175 GLY GLY A . n D 4 197 ARG 197 176 176 ARG ARG A . n D 4 198 SER 198 177 177 SER SER A . n D 4 199 THR 199 178 178 THR THR A . n D 4 200 LEU 200 179 179 LEU LEU A . n D 4 201 LYS 201 180 180 LYS LYS A . n D 4 202 GLU 202 181 181 GLU GLU A . n D 4 203 GLY 203 182 182 GLY GLY A . n D 4 204 ILE 204 183 183 ILE ILE A . n D 4 205 LEU 205 184 184 LEU LEU A . n D 4 206 LEU 206 185 185 LEU LEU A . n D 4 207 LYS 207 186 186 LYS LYS A . n D 4 208 MET 208 187 187 MET MET A . n D 4 209 LYS 209 188 188 LYS LYS A . n D 4 210 GLN 210 189 189 GLN GLN A . n D 4 211 PHE 211 190 190 PHE PHE A . n D 4 212 LYS 212 191 191 LYS LYS A . n D 4 213 ASP 213 192 192 ASP ASP A . n D 4 214 ALA 214 193 193 ALA ALA A . n D 4 215 GLU 215 194 194 GLU GLU A . n D 4 216 ALA 216 195 195 ALA ALA A . n D 4 217 THR 217 196 196 THR THR A . n D 4 218 ILE 218 197 197 ILE ILE A . n D 4 219 ILE 219 198 198 ILE ILE A . n D 4 220 SER 220 199 199 SER SER A . n D 4 221 MET 221 200 200 MET MET A . n D 4 222 THR 222 201 201 THR THR A . n D 4 223 ALA 223 202 202 ALA ALA A . n D 4 224 LEU 224 203 203 LEU LEU A . n D 4 225 PHE 225 204 204 PHE PHE A . n D 4 226 LYS 226 205 205 LYS LYS A . n D 4 227 ASN 227 206 206 ASN ASN A . n D 4 228 THR 228 207 207 THR THR A . n D 4 229 ASN 229 208 208 ASN ASN A . n D 4 230 THR 230 209 209 THR THR A . n D 4 231 LYS 231 210 210 LYS LYS A . n D 4 232 THR 232 211 211 THR THR A . n D 4 233 LYS 233 212 212 LYS LYS A . n D 4 234 ASP 234 213 213 ASP ASP A . n D 4 235 ASN 235 214 214 ASN ASN A . n D 4 236 PHE 236 215 215 PHE PHE A . n D 4 237 GLY 237 216 216 GLY GLY A . n D 4 238 TYR 238 217 217 TYR TYR A . n D 4 239 SER 239 218 218 SER SER A . n D 4 240 LYS 240 219 219 LYS LYS A . n D 4 241 ARG 241 220 220 ARG ARG A . n D 4 242 SER 242 221 221 SER SER A . n D 4 243 THR 243 222 222 THR THR A . n D 4 244 HIS 244 223 223 HIS HIS A . n D 4 245 LYS 245 224 224 LYS LYS A . n D 4 246 SER 246 225 225 SER SER A . n D 4 247 GLY 247 226 226 GLY GLY A . n D 4 248 LYS 248 227 227 LYS LYS A . n D 4 249 VAL 249 228 228 VAL VAL A . n D 4 250 GLU 250 229 229 GLU GLU A . n D 4 251 GLU 251 230 230 GLU GLU A . n D 4 252 ASP 252 231 231 ASP ASP A . n D 4 253 VAL 253 232 232 VAL VAL A . n D 4 254 MET 254 233 233 MET MET A . n D 4 255 GLY 255 234 234 GLY GLY A . n D 4 256 SER 256 235 235 SER SER A . n D 4 257 ILE 257 236 236 ILE ILE A . n D 4 258 GLU 258 237 237 GLU GLU A . n D 4 259 VAL 259 238 238 VAL VAL A . n D 4 260 ASP 260 239 239 ASP ASP A . n D 4 261 TYR 261 240 240 TYR TYR A . n D 4 262 ASP 262 241 241 ASP ASP A . n D 4 263 GLY 263 242 242 GLY GLY A . n D 4 264 VAL 264 243 243 VAL VAL A . n D 4 265 VAL 265 244 244 VAL VAL A . n D 4 266 PHE 266 245 245 PHE PHE A . n D 4 267 SER 267 246 246 SER SER A . n D 4 268 ILE 268 247 247 ILE ILE A . n D 4 269 GLY 269 248 248 GLY GLY A . n D 4 270 THR 270 249 249 THR THR A . n D 4 271 GLY 271 250 250 GLY GLY A . n D 4 272 PHE 272 251 251 PHE PHE A . n D 4 273 ASP 273 252 252 ASP ASP A . n D 4 274 ALA 274 253 253 ALA ALA A . n D 4 275 ASP 275 254 254 ASP ASP A . n D 4 276 GLN 276 255 255 GLN GLN A . n D 4 277 ARG 277 256 256 ARG ARG A . n D 4 278 ARG 278 257 257 ARG ARG A . n D 4 279 ASP 279 258 258 ASP ASP A . n D 4 280 PHE 280 259 259 PHE PHE A . n D 4 281 TRP 281 260 260 TRP TRP A . n D 4 282 GLN 282 261 261 GLN GLN A . n D 4 283 ASN 283 262 262 ASN ASN A . n D 4 284 LYS 284 263 263 LYS LYS A . n D 4 285 GLU 285 264 264 GLU GLU A . n D 4 286 SER 286 265 265 SER SER A . n D 4 287 TYR 287 266 266 TYR TYR A . n D 4 288 ILE 288 267 267 ILE ILE A . n D 4 289 GLY 289 268 268 GLY GLY A . n D 4 290 LYS 290 269 269 LYS LYS A . n D 4 291 MET 291 270 270 MET MET A . n D 4 292 VAL 292 271 271 VAL VAL A . n D 4 293 LYS 293 272 272 LYS LYS A . n D 4 294 PHE 294 273 273 PHE PHE A . n D 4 295 LYS 295 274 274 LYS LYS A . n D 4 296 TYR 296 275 275 TYR TYR A . n D 4 297 PHE 297 276 276 PHE PHE A . n D 4 298 GLU 298 277 277 GLU GLU A . n D 4 299 MET 299 278 278 MET MET A . n D 4 300 GLY 300 279 279 GLY GLY A . n D 4 301 SER 301 280 280 SER SER A . n D 4 302 LYS 302 281 281 LYS LYS A . n D 4 303 ASP 303 282 282 ASP ASP A . n D 4 304 CYS 304 283 283 CYS CYS A . n D 4 305 PRO 305 284 284 PRO PRO A . n D 4 306 ARG 306 285 285 ARG ARG A . n D 4 307 PHE 307 286 286 PHE PHE A . n D 4 308 PRO 308 287 287 PRO PRO A . n D 4 309 VAL 309 288 288 VAL VAL A . n D 4 310 PHE 310 289 289 PHE PHE A . n D 4 311 ILE 311 290 290 ILE ILE A . n D 4 312 GLY 312 291 291 GLY GLY A . n D 4 313 ILE 313 292 292 ILE ILE A . n D 4 314 ARG 314 293 293 ARG ARG A . n D 4 315 HIS 315 294 ? ? ? A . n D 4 316 GLU 316 295 ? ? ? A . n D 4 317 GLU 317 296 ? ? ? A . n D 4 318 ASP 318 297 ? ? ? A . n D 4 319 ARG 319 298 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 AMP 1 300 300 AMP AMP A . F 6 HOH 1 22 10 HOH WAT B . F 6 HOH 2 23 15 HOH WAT B . F 6 HOH 3 24 17 HOH WAT B . F 6 HOH 4 25 21 HOH WAT B . F 6 HOH 5 26 50 HOH WAT B . F 6 HOH 6 27 51 HOH WAT B . F 6 HOH 7 28 53 HOH WAT B . F 6 HOH 8 29 54 HOH WAT B . F 6 HOH 9 30 57 HOH WAT B . F 6 HOH 10 31 60 HOH WAT B . F 6 HOH 11 32 67 HOH WAT B . F 6 HOH 12 33 70 HOH WAT B . F 6 HOH 13 34 76 HOH WAT B . F 6 HOH 14 35 84 HOH WAT B . F 6 HOH 15 36 89 HOH WAT B . F 6 HOH 16 37 114 HOH WAT B . F 6 HOH 17 38 123 HOH WAT B . G 6 HOH 1 32 8 HOH WAT C . G 6 HOH 2 33 28 HOH WAT C . G 6 HOH 3 34 52 HOH WAT C . G 6 HOH 4 35 72 HOH WAT C . G 6 HOH 5 36 115 HOH WAT C . G 6 HOH 6 37 138 HOH WAT C . H 6 HOH 1 43 39 HOH WAT D . H 6 HOH 2 44 40 HOH WAT D . H 6 HOH 3 45 46 HOH WAT D . H 6 HOH 4 46 62 HOH WAT D . H 6 HOH 5 47 101 HOH WAT D . H 6 HOH 6 48 117 HOH WAT D . H 6 HOH 7 49 143 HOH WAT D . I 6 HOH 1 301 2 HOH WAT A . I 6 HOH 2 302 3 HOH WAT A . I 6 HOH 3 303 4 HOH WAT A . I 6 HOH 4 304 5 HOH WAT A . I 6 HOH 5 305 6 HOH WAT A . I 6 HOH 6 306 7 HOH WAT A . I 6 HOH 7 307 9 HOH WAT A . I 6 HOH 8 308 11 HOH WAT A . I 6 HOH 9 309 12 HOH WAT A . I 6 HOH 10 310 13 HOH WAT A . I 6 HOH 11 311 14 HOH WAT A . I 6 HOH 12 312 16 HOH WAT A . I 6 HOH 13 313 18 HOH WAT A . I 6 HOH 14 314 19 HOH WAT A . I 6 HOH 15 315 20 HOH WAT A . I 6 HOH 16 316 22 HOH WAT A . I 6 HOH 17 317 23 HOH WAT A . I 6 HOH 18 318 24 HOH WAT A . I 6 HOH 19 319 25 HOH WAT A . I 6 HOH 20 320 26 HOH WAT A . I 6 HOH 21 321 27 HOH WAT A . I 6 HOH 22 322 29 HOH WAT A . I 6 HOH 23 323 30 HOH WAT A . I 6 HOH 24 324 31 HOH WAT A . I 6 HOH 25 325 32 HOH WAT A . I 6 HOH 26 326 33 HOH WAT A . I 6 HOH 27 327 34 HOH WAT A . I 6 HOH 28 328 35 HOH WAT A . I 6 HOH 29 329 36 HOH WAT A . I 6 HOH 30 330 37 HOH WAT A . I 6 HOH 31 331 38 HOH WAT A . I 6 HOH 32 332 41 HOH WAT A . I 6 HOH 33 333 42 HOH WAT A . I 6 HOH 34 334 43 HOH WAT A . I 6 HOH 35 335 44 HOH WAT A . I 6 HOH 36 336 45 HOH WAT A . I 6 HOH 37 337 47 HOH WAT A . I 6 HOH 38 338 48 HOH WAT A . I 6 HOH 39 339 49 HOH WAT A . I 6 HOH 40 340 55 HOH WAT A . I 6 HOH 41 341 56 HOH WAT A . I 6 HOH 42 342 58 HOH WAT A . I 6 HOH 43 343 59 HOH WAT A . I 6 HOH 44 344 61 HOH WAT A . I 6 HOH 45 345 63 HOH WAT A . I 6 HOH 46 346 64 HOH WAT A . I 6 HOH 47 347 65 HOH WAT A . I 6 HOH 48 348 66 HOH WAT A . I 6 HOH 49 349 68 HOH WAT A . I 6 HOH 50 350 69 HOH WAT A . I 6 HOH 51 351 71 HOH WAT A . I 6 HOH 52 352 73 HOH WAT A . I 6 HOH 53 353 74 HOH WAT A . I 6 HOH 54 354 75 HOH WAT A . I 6 HOH 55 355 77 HOH WAT A . I 6 HOH 56 356 78 HOH WAT A . I 6 HOH 57 357 79 HOH WAT A . I 6 HOH 58 358 80 HOH WAT A . I 6 HOH 59 359 81 HOH WAT A . I 6 HOH 60 360 82 HOH WAT A . I 6 HOH 61 361 83 HOH WAT A . I 6 HOH 62 362 85 HOH WAT A . I 6 HOH 63 363 86 HOH WAT A . I 6 HOH 64 364 87 HOH WAT A . I 6 HOH 65 365 88 HOH WAT A . I 6 HOH 66 366 90 HOH WAT A . I 6 HOH 67 367 91 HOH WAT A . I 6 HOH 68 368 92 HOH WAT A . I 6 HOH 69 369 93 HOH WAT A . I 6 HOH 70 370 94 HOH WAT A . I 6 HOH 71 371 95 HOH WAT A . I 6 HOH 72 372 96 HOH WAT A . I 6 HOH 73 373 97 HOH WAT A . I 6 HOH 74 374 98 HOH WAT A . I 6 HOH 75 375 99 HOH WAT A . I 6 HOH 76 376 100 HOH WAT A . I 6 HOH 77 377 102 HOH WAT A . I 6 HOH 78 378 103 HOH WAT A . I 6 HOH 79 379 104 HOH WAT A . I 6 HOH 80 380 105 HOH WAT A . I 6 HOH 81 381 106 HOH WAT A . I 6 HOH 82 382 107 HOH WAT A . I 6 HOH 83 383 108 HOH WAT A . I 6 HOH 84 384 109 HOH WAT A . I 6 HOH 85 385 110 HOH WAT A . I 6 HOH 86 386 111 HOH WAT A . I 6 HOH 87 387 112 HOH WAT A . I 6 HOH 88 388 113 HOH WAT A . I 6 HOH 89 389 116 HOH WAT A . I 6 HOH 90 390 118 HOH WAT A . I 6 HOH 91 391 119 HOH WAT A . I 6 HOH 92 392 120 HOH WAT A . I 6 HOH 93 393 121 HOH WAT A . I 6 HOH 94 394 122 HOH WAT A . I 6 HOH 95 395 124 HOH WAT A . I 6 HOH 96 396 125 HOH WAT A . I 6 HOH 97 397 126 HOH WAT A . I 6 HOH 98 398 127 HOH WAT A . I 6 HOH 99 399 128 HOH WAT A . I 6 HOH 100 400 129 HOH WAT A . I 6 HOH 101 401 130 HOH WAT A . I 6 HOH 102 402 131 HOH WAT A . I 6 HOH 103 403 132 HOH WAT A . I 6 HOH 104 404 133 HOH WAT A . I 6 HOH 105 405 134 HOH WAT A . I 6 HOH 106 406 135 HOH WAT A . I 6 HOH 107 407 136 HOH WAT A . I 6 HOH 108 408 137 HOH WAT A . I 6 HOH 109 409 139 HOH WAT A . I 6 HOH 110 410 140 HOH WAT A . I 6 HOH 111 411 141 HOH WAT A . I 6 HOH 112 412 142 HOH WAT A . I 6 HOH 113 413 144 HOH WAT A . I 6 HOH 114 414 145 HOH WAT A . I 6 HOH 115 415 146 HOH WAT A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 CNS . ? ? ? ? phasing ? ? ? 6 # _cell.length_a 66.301 _cell.length_b 81.290 _cell.length_c 96.418 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2Q2T _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 2Q2T _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 2Q2T _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;A mixture of ChVLig (230 microM), nicked duplex DNA (220 microM) and 2 mM EDTA was added to an equal volume of a well solution containing 100 mM Bis-Tris-HCl (pH 6.5), 30 mM ammonium acetate, 22% PEG-4000. Crystals were grown at 22 C by the sitting-drop vapor diffusion method. Crystals appeared after 3 days. The crystals were transferred to buffer containing 100 mM Bis-Tris-HCl (pH 6.5), 30 mM ammonium acetate, 22% PEG-4000, 15% glycerol prior to flash-freezing in liquid nitrogen. , VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 Bis-Tris-HCL ? ? ? 1 2 1 'ammonium acetate' ? ? ? 1 3 1 PEG-4000 ? ? ? 1 4 1 EDTA ? ? ? 1 5 2 PEG-4000 ? ? ? 1 6 2 EDTA ? ? ? 1 7 2 'ammonium acetate' ? ? ? 1 8 3 'ammonium acetate' ? ? ? 1 9 3 EDTA ? ? ? 1 10 3 PEG-4000 ? ? ? 1 11 3 glycerol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-03-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 2Q2T _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 50.000 _reflns.number_obs 23105 _reflns.pdbx_Rmerge_I_obs 0.084 _reflns.pdbx_netI_over_sigmaI 14.200 _reflns.pdbx_chi_squared 1.050 _reflns.pdbx_redundancy 3.600 _reflns.percent_possible_obs 96.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -1.5 _reflns.number_all 23844 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.332 _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.808 _reflns_shell.pdbx_redundancy 3.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2248 _reflns_shell.percent_possible_all 95.70 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2Q2T _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 38.990 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF 1201398.750 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.ls_percent_reflns_obs 96.900 _refine.ls_number_reflns_obs 23077 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_R_work 0.214 _refine.ls_R_factor_R_free 0.261 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1151 _refine.ls_R_factor_R_free_error 0.008 _refine.B_iso_mean 44.200 _refine.solvent_model_param_bsol 33.819 _refine.solvent_model_param_ksol 0.340 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] -14.030 _refine.aniso_B[2][2] 6.900 _refine.aniso_B[3][3] 7.130 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 23815 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1FVI _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.occupancy_max ? _refine.occupancy_min ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2Q2T _refine_analyze.Luzzati_coordinate_error_obs 0.300 _refine_analyze.Luzzati_sigma_a_obs 0.330 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.400 _refine_analyze.Luzzati_sigma_a_free 0.450 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2361 _refine_hist.pdbx_number_atoms_nucleic_acid 858 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 3386 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 38.990 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.006 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.200 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? 22.200 ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? 1.140 ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.410 1.500 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.340 2.000 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.170 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.310 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.440 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 95.900 _refine_ls_shell.number_reflns_R_work 3574 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.300 _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.percent_reflns_R_free 4.300 _refine_ls_shell.number_reflns_R_free 162 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 3736 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep-apl.param dna-rna-apc.top 'X-RAY DIFFRACTION' 2 dna-rna-apc_rep.param water.top 'X-RAY DIFFRACTION' 3 water_rep.param ion.top 'X-RAY DIFFRACTION' 4 ion.param protein-apl.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2Q2T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 2Q2T _struct.title ;Structure of Chlorella virus DNA ligase-adenylate bound to a 5' phosphorylated nick ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Q2T _struct_keywords.pdbx_keywords LIGASE/DNA _struct_keywords.text 'LIGASE, LYSINE ADENYLATE, PROTEIN-DNA COMPLEX, LIGASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP O41026_PBCV1 O41026 4 ;MAITKPLLAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGATFQDTTS AVMTGHKMYNAKFSYYWFDYVTDDPLKKYIDRVEDMKNYITVHPHILEHAQVKIIPLIPVEINNITELLQYERDVLSKGF EGVMIRKPDGKYKFGRSTLKEGILLKMKQFKDAEATIISMTALFKNTNTKTKDNFGYSKRSTHKSGKVEEDVMGSIEVDY DGVVFSIGTGFDADQRRDFWQNKESYIGKMVKFKYFEMGSKDCPRFPVFIGIRHEEDR ; 1 ? 2 PDB 2Q2T 2Q2T 1 ? ? ? 3 PDB 2Q2T 2Q2T 2 ? ? ? 4 PDB 2Q2T 2Q2T 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2Q2T A 22 ? 319 ? O41026 1 ? 298 ? 1 298 2 2 2Q2T B 1 ? 21 ? 2Q2T 1 ? 21 ? 1 21 3 3 2Q2T C 1 ? 10 ? 2Q2T 22 ? 31 ? 22 31 4 4 2Q2T D 1 ? 11 ? 2Q2T 32 ? 42 ? 32 42 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2Q2T MET A 1 ? UNP O41026 ? ? 'expression tag' -20 1 1 2Q2T GLY A 2 ? UNP O41026 ? ? 'expression tag' -19 2 1 2Q2T HIS A 3 ? UNP O41026 ? ? 'expression tag' -18 3 1 2Q2T HIS A 4 ? UNP O41026 ? ? 'expression tag' -17 4 1 2Q2T HIS A 5 ? UNP O41026 ? ? 'expression tag' -16 5 1 2Q2T HIS A 6 ? UNP O41026 ? ? 'expression tag' -15 6 1 2Q2T HIS A 7 ? UNP O41026 ? ? 'expression tag' -14 7 1 2Q2T HIS A 8 ? UNP O41026 ? ? 'expression tag' -13 8 1 2Q2T HIS A 9 ? UNP O41026 ? ? 'expression tag' -12 9 1 2Q2T HIS A 10 ? UNP O41026 ? ? 'expression tag' -11 10 1 2Q2T HIS A 11 ? UNP O41026 ? ? 'expression tag' -10 11 1 2Q2T HIS A 12 ? UNP O41026 ? ? 'expression tag' -9 12 1 2Q2T SER A 13 ? UNP O41026 ? ? 'expression tag' -8 13 1 2Q2T SER A 14 ? UNP O41026 ? ? 'expression tag' -7 14 1 2Q2T GLY A 15 ? UNP O41026 ? ? 'expression tag' -6 15 1 2Q2T HIS A 16 ? UNP O41026 ? ? 'expression tag' -5 16 1 2Q2T ILE A 17 ? UNP O41026 ? ? 'expression tag' -4 17 1 2Q2T GLU A 18 ? UNP O41026 ? ? 'expression tag' -3 18 1 2Q2T GLY A 19 ? UNP O41026 ? ? 'expression tag' -2 19 1 2Q2T ARG A 20 ? UNP O41026 ? ? 'expression tag' -1 20 1 2Q2T HIS A 21 ? UNP O41026 ? ? 'expression tag' 0 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN D 35 ? VAL D 39 ? ASN A 14 VAL A 18 5 ? 5 HELX_P HELX_P2 2 ASN D 70 ? LEU D 81 ? ASN A 49 LEU A 60 1 ? 12 HELX_P HELX_P3 3 THR D 95 ? THR D 105 ? THR A 74 THR A 84 1 ? 11 HELX_P HELX_P4 4 LYS D 129 ? HIS D 144 ? LYS A 108 HIS A 123 1 ? 16 HELX_P HELX_P5 5 PRO D 145 ? GLU D 149 ? PRO A 124 GLU A 128 5 ? 5 HELX_P HELX_P6 6 ASN D 165 ? LYS D 179 ? ASN A 144 LYS A 158 1 ? 15 HELX_P HELX_P7 7 HIS D 244 ? SER D 246 ? HIS A 223 SER A 225 5 ? 3 HELX_P HELX_P8 8 ASP D 273 ? ASN D 283 ? ASP A 252 ASN A 262 1 ? 11 HELX_P HELX_P9 9 ASN D 283 ? ILE D 288 ? ASN A 262 ILE A 267 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? D LYS 48 NZ ? ? ? 1_555 E AMP . P ? ? A LYS 27 A AMP 300 1_555 ? ? ? ? ? ? ? 1.468 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 C DA 11 N1 ? ? B DT 1 D DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 C DA 11 N6 ? ? B DT 1 D DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 2 D DA 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 2 D DA 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 3 D DG 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 3 D DG 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 3 D DG 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 4 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 4 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 4 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 5 D DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 5 D DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 5 D DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N1 ? ? ? 1_555 C DT 6 N3 ? ? B DA 6 D DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N6 ? ? ? 1_555 C DT 6 O4 ? ? B DA 6 D DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 7 D DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 7 D DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N1 ? ? ? 1_555 C DT 4 N3 ? ? B DA 8 D DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N6 ? ? ? 1_555 C DT 4 O4 ? ? B DA 8 D DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 9 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 9 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 9 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 10 N3 ? ? ? 1_555 C DA 2 N1 ? ? B DT 10 D DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 10 O4 ? ? ? 1_555 C DA 2 N6 ? ? B DT 10 D DA 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 11 N1 ? ? ? 1_555 C DC 1 N3 ? ? B DG 11 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 11 N2 ? ? ? 1_555 C DC 1 O2 ? ? B DG 11 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 O6 ? ? ? 1_555 C DC 1 N4 ? ? B DG 11 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 12 C DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 12 C DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 12 C DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B OMC 9 N3 ? ? B DG 13 C OMC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B OMC 9 O2 ? ? B DG 13 C OMC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B OMC 9 N4 ? ? B DG 13 C OMC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 14 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 14 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 14 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 7 N1 ? ? B DT 15 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 7 N6 ? ? B DT 15 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 6 N1 ? ? B DC 16 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 6 O6 ? ? B DC 16 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 6 N2 ? ? B DC 16 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 17 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 17 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 17 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 4 N1 ? ? B DC 18 C DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 4 O6 ? ? B DC 18 C DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 4 N2 ? ? B DC 18 C DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 3 N3 ? ? B DA 19 C DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 3 O4 ? ? B DA 19 C DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 2 N3 ? ? B DA 20 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 2 O4 ? ? B DA 20 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DT 21 N3 ? ? ? 1_555 B DA 1 N1 ? ? B DT 21 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 1 N6 ? ? B DT 21 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id AMP _pdbx_modification_feature.label_asym_id E _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id LYS _pdbx_modification_feature.modified_residue_label_asym_id D _pdbx_modification_feature.modified_residue_label_seq_id 48 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id AMP _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 300 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id LYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 27 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom P _pdbx_modification_feature.modified_residue_id_linking_atom NZ _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 13 _pdbx_modification_feature.ref_comp_id AMP _pdbx_modification_feature.type AMPylation _pdbx_modification_feature.category 'Nucleotide monophosphate' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 41 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 20 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 42 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 21 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 5 ? D ? 5 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU D 28 ? LEU D 29 ? LEU A 7 LEU A 8 A 2 GLY D 196 ? ARG D 197 ? GLY A 175 ARG A 176 B 1 ALA D 31 ? THR D 32 ? ALA A 10 THR A 11 B 2 LEU D 205 ? MET D 208 ? LEU A 184 MET A 187 B 3 GLY D 183 ? ARG D 187 ? GLY A 162 ARG A 166 B 4 CYS D 43 ? LYS D 48 ? CYS A 22 LYS A 27 B 5 VAL D 161 ? ILE D 163 ? VAL A 140 ILE A 142 C 1 MET D 60 ? LEU D 61 ? MET A 39 LEU A 40 C 2 ILE D 52 ? LYS D 56 ? ILE A 31 LYS A 35 C 3 SER D 85 ? SER D 90 ? SER A 64 SER A 69 C 4 PHE D 114 ? TYR D 121 ? PHE A 93 TYR A 100 C 5 VAL D 153 ? PRO D 157 ? VAL A 132 PRO A 136 D 1 VAL D 264 ? ILE D 268 ? VAL A 243 ILE A 247 D 2 LYS D 248 ? TYR D 261 ? LYS A 227 TYR A 240 D 3 LYS D 212 ? ASN D 227 ? LYS A 191 ASN A 206 D 4 MET D 291 ? PHE D 297 ? MET A 270 PHE A 276 D 5 ARG D 306 ? ILE D 313 ? ARG A 285 ILE A 292 E 1 THR D 232 ? LYS D 233 ? THR A 211 LYS A 212 E 2 SER D 239 ? LYS D 240 ? SER A 218 LYS A 219 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU D 29 ? N LEU A 8 O GLY D 196 ? O GLY A 175 B 1 2 N ALA D 31 ? N ALA A 10 O LEU D 205 ? O LEU A 184 B 2 3 O LEU D 206 ? O LEU A 185 N ILE D 186 ? N ILE A 165 B 3 4 O MET D 185 ? O MET A 164 N THR D 46 ? N THR A 25 B 4 5 N ALA D 45 ? N ALA A 24 O VAL D 161 ? O VAL A 140 C 1 2 O LEU D 61 ? O LEU A 40 N VAL D 55 ? N VAL A 34 C 2 3 N ILE D 52 ? N ILE A 31 O ILE D 89 ? O ILE A 68 C 3 4 N GLU D 88 ? N GLU A 67 O TYR D 117 ? O TYR A 96 C 4 5 N TYR D 116 ? N TYR A 95 O ILE D 156 ? O ILE A 135 D 1 2 O VAL D 264 ? O VAL A 243 N TYR D 261 ? N TYR A 240 D 2 3 O GLY D 255 ? O GLY A 234 N THR D 222 ? N THR A 201 D 3 4 N ALA D 216 ? N ALA A 195 O VAL D 292 ? O VAL A 271 D 4 5 N LYS D 293 ? N LYS A 272 O GLY D 312 ? O GLY A 291 E 1 2 N THR D 232 ? N THR A 211 O LYS D 240 ? O LYS A 219 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id AMP _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 18 _struct_site.details 'BINDING SITE FOR RESIDUE AMP A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 THR D 46 ? THR A 25 . ? 1_555 ? 2 AC1 18 PRO D 47 ? PRO A 26 . ? 1_555 ? 3 AC1 18 LYS D 48 ? LYS A 27 . ? 1_555 ? 4 AC1 18 ILE D 49 ? ILE A 28 . ? 1_555 ? 5 AC1 18 ARG D 53 ? ARG A 32 . ? 1_555 ? 6 AC1 18 GLU D 88 ? GLU A 67 . ? 1_555 ? 7 AC1 18 PHE D 119 ? PHE A 98 . ? 1_555 ? 8 AC1 18 LEU D 158 ? LEU A 137 . ? 1_555 ? 9 AC1 18 GLU D 182 ? GLU A 161 . ? 1_555 ? 10 AC1 18 MET D 185 ? MET A 164 . ? 1_555 ? 11 AC1 18 LYS D 207 ? LYS A 186 . ? 1_555 ? 12 AC1 18 LYS D 209 ? LYS A 188 . ? 1_555 ? 13 AC1 18 HOH I . ? HOH A 319 . ? 1_555 ? 14 AC1 18 HOH I . ? HOH A 336 . ? 1_555 ? 15 AC1 18 HOH I . ? HOH A 367 . ? 1_555 ? 16 AC1 18 HOH I . ? HOH A 370 . ? 1_555 ? 17 AC1 18 DC B 10 ? DC C 31 . ? 1_555 ? 18 AC1 18 DC C 1 ? DC D 32 . ? 1_555 ? # _pdbx_entry_details.entry_id 2Q2T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 49 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 403 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 32 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 32 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.519 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.088 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 37 ? ? 78.50 -53.92 2 1 ASN A 49 ? ? -69.00 76.52 3 1 SER A 50 ? ? -36.36 -33.25 4 1 THR A 102 ? ? -91.22 -90.99 5 1 THR A 211 ? ? -113.07 -145.89 6 1 ASP A 231 ? ? -93.64 44.44 7 1 ASP A 241 ? ? 39.64 48.77 8 1 LYS A 281 ? ? -99.32 -77.67 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT B 10 ? ? 0.094 'SIDE CHAIN' 2 1 DG B 11 ? ? 0.090 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id OMC _pdbx_struct_mod_residue.label_seq_id 9 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id OMC _pdbx_struct_mod_residue.auth_seq_id 30 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id C _pdbx_struct_mod_residue.details "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -20 ? D MET 1 2 1 Y 1 A GLY -19 ? D GLY 2 3 1 Y 1 A HIS -18 ? D HIS 3 4 1 Y 1 A HIS -17 ? D HIS 4 5 1 Y 1 A HIS -16 ? D HIS 5 6 1 Y 1 A HIS -15 ? D HIS 6 7 1 Y 1 A HIS -14 ? D HIS 7 8 1 Y 1 A HIS -13 ? D HIS 8 9 1 Y 1 A HIS -12 ? D HIS 9 10 1 Y 1 A HIS -11 ? D HIS 10 11 1 Y 1 A HIS -10 ? D HIS 11 12 1 Y 1 A HIS -9 ? D HIS 12 13 1 Y 1 A SER -8 ? D SER 13 14 1 Y 1 A SER -7 ? D SER 14 15 1 Y 1 A GLY -6 ? D GLY 15 16 1 Y 1 A HIS -5 ? D HIS 16 17 1 Y 1 A ILE -4 ? D ILE 17 18 1 Y 1 A GLU -3 ? D GLU 18 19 1 Y 1 A GLY -2 ? D GLY 19 20 1 Y 1 A ARG -1 ? D ARG 20 21 1 Y 1 A HIS 0 ? D HIS 21 22 1 Y 1 A HIS 294 ? D HIS 315 23 1 Y 1 A GLU 295 ? D GLU 316 24 1 Y 1 A GLU 296 ? D GLU 317 25 1 Y 1 A ASP 297 ? D ASP 318 26 1 Y 1 A ARG 298 ? D ARG 319 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AMP P P N N 14 AMP O1P O N N 15 AMP O2P O N N 16 AMP O3P O N N 17 AMP "O5'" O N N 18 AMP "C5'" C N N 19 AMP "C4'" C N R 20 AMP "O4'" O N N 21 AMP "C3'" C N S 22 AMP "O3'" O N N 23 AMP "C2'" C N R 24 AMP "O2'" O N N 25 AMP "C1'" C N R 26 AMP N9 N Y N 27 AMP C8 C Y N 28 AMP N7 N Y N 29 AMP C5 C Y N 30 AMP C6 C Y N 31 AMP N6 N N N 32 AMP N1 N Y N 33 AMP C2 C Y N 34 AMP N3 N Y N 35 AMP C4 C Y N 36 AMP HOP2 H N N 37 AMP HOP3 H N N 38 AMP "H5'1" H N N 39 AMP "H5'2" H N N 40 AMP "H4'" H N N 41 AMP "H3'" H N N 42 AMP "HO3'" H N N 43 AMP "H2'" H N N 44 AMP "HO2'" H N N 45 AMP "H1'" H N N 46 AMP H8 H N N 47 AMP HN61 H N N 48 AMP HN62 H N N 49 AMP H2 H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 OMC N1 N N N 430 OMC C2 C N N 431 OMC N3 N N N 432 OMC C4 C N N 433 OMC C5 C N N 434 OMC C6 C N N 435 OMC O2 O N N 436 OMC N4 N N N 437 OMC "C1'" C N R 438 OMC "C2'" C N R 439 OMC "O2'" O N N 440 OMC CM2 C N N 441 OMC "C3'" C N R 442 OMC "C4'" C N R 443 OMC "O4'" O N N 444 OMC "O3'" O N N 445 OMC "C5'" C N N 446 OMC "O5'" O N N 447 OMC P P N N 448 OMC OP1 O N N 449 OMC OP2 O N N 450 OMC OP3 O N N 451 OMC H5 H N N 452 OMC H6 H N N 453 OMC HN41 H N N 454 OMC HN42 H N N 455 OMC "H1'" H N N 456 OMC "H2'" H N N 457 OMC HM21 H N N 458 OMC HM22 H N N 459 OMC HM23 H N N 460 OMC "H3'" H N N 461 OMC "H4'" H N N 462 OMC "HO3'" H N N 463 OMC "H5'" H N N 464 OMC "H5''" H N N 465 OMC HOP2 H N N 466 OMC HOP3 H N N 467 PHE N N N N 468 PHE CA C N S 469 PHE C C N N 470 PHE O O N N 471 PHE CB C N N 472 PHE CG C Y N 473 PHE CD1 C Y N 474 PHE CD2 C Y N 475 PHE CE1 C Y N 476 PHE CE2 C Y N 477 PHE CZ C Y N 478 PHE OXT O N N 479 PHE H H N N 480 PHE H2 H N N 481 PHE HA H N N 482 PHE HB2 H N N 483 PHE HB3 H N N 484 PHE HD1 H N N 485 PHE HD2 H N N 486 PHE HE1 H N N 487 PHE HE2 H N N 488 PHE HZ H N N 489 PHE HXT H N N 490 PRO N N N N 491 PRO CA C N S 492 PRO C C N N 493 PRO O O N N 494 PRO CB C N N 495 PRO CG C N N 496 PRO CD C N N 497 PRO OXT O N N 498 PRO H H N N 499 PRO HA H N N 500 PRO HB2 H N N 501 PRO HB3 H N N 502 PRO HG2 H N N 503 PRO HG3 H N N 504 PRO HD2 H N N 505 PRO HD3 H N N 506 PRO HXT H N N 507 SER N N N N 508 SER CA C N S 509 SER C C N N 510 SER O O N N 511 SER CB C N N 512 SER OG O N N 513 SER OXT O N N 514 SER H H N N 515 SER H2 H N N 516 SER HA H N N 517 SER HB2 H N N 518 SER HB3 H N N 519 SER HG H N N 520 SER HXT H N N 521 THR N N N N 522 THR CA C N S 523 THR C C N N 524 THR O O N N 525 THR CB C N R 526 THR OG1 O N N 527 THR CG2 C N N 528 THR OXT O N N 529 THR H H N N 530 THR H2 H N N 531 THR HA H N N 532 THR HB H N N 533 THR HG1 H N N 534 THR HG21 H N N 535 THR HG22 H N N 536 THR HG23 H N N 537 THR HXT H N N 538 TRP N N N N 539 TRP CA C N S 540 TRP C C N N 541 TRP O O N N 542 TRP CB C N N 543 TRP CG C Y N 544 TRP CD1 C Y N 545 TRP CD2 C Y N 546 TRP NE1 N Y N 547 TRP CE2 C Y N 548 TRP CE3 C Y N 549 TRP CZ2 C Y N 550 TRP CZ3 C Y N 551 TRP CH2 C Y N 552 TRP OXT O N N 553 TRP H H N N 554 TRP H2 H N N 555 TRP HA H N N 556 TRP HB2 H N N 557 TRP HB3 H N N 558 TRP HD1 H N N 559 TRP HE1 H N N 560 TRP HE3 H N N 561 TRP HZ2 H N N 562 TRP HZ3 H N N 563 TRP HH2 H N N 564 TRP HXT H N N 565 TYR N N N N 566 TYR CA C N S 567 TYR C C N N 568 TYR O O N N 569 TYR CB C N N 570 TYR CG C Y N 571 TYR CD1 C Y N 572 TYR CD2 C Y N 573 TYR CE1 C Y N 574 TYR CE2 C Y N 575 TYR CZ C Y N 576 TYR OH O N N 577 TYR OXT O N N 578 TYR H H N N 579 TYR H2 H N N 580 TYR HA H N N 581 TYR HB2 H N N 582 TYR HB3 H N N 583 TYR HD1 H N N 584 TYR HD2 H N N 585 TYR HE1 H N N 586 TYR HE2 H N N 587 TYR HH H N N 588 TYR HXT H N N 589 VAL N N N N 590 VAL CA C N S 591 VAL C C N N 592 VAL O O N N 593 VAL CB C N N 594 VAL CG1 C N N 595 VAL CG2 C N N 596 VAL OXT O N N 597 VAL H H N N 598 VAL H2 H N N 599 VAL HA H N N 600 VAL HB H N N 601 VAL HG11 H N N 602 VAL HG12 H N N 603 VAL HG13 H N N 604 VAL HG21 H N N 605 VAL HG22 H N N 606 VAL HG23 H N N 607 VAL HXT H N N 608 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AMP P O1P doub N N 13 AMP P O2P sing N N 14 AMP P O3P sing N N 15 AMP P "O5'" sing N N 16 AMP O2P HOP2 sing N N 17 AMP O3P HOP3 sing N N 18 AMP "O5'" "C5'" sing N N 19 AMP "C5'" "C4'" sing N N 20 AMP "C5'" "H5'1" sing N N 21 AMP "C5'" "H5'2" sing N N 22 AMP "C4'" "O4'" sing N N 23 AMP "C4'" "C3'" sing N N 24 AMP "C4'" "H4'" sing N N 25 AMP "O4'" "C1'" sing N N 26 AMP "C3'" "O3'" sing N N 27 AMP "C3'" "C2'" sing N N 28 AMP "C3'" "H3'" sing N N 29 AMP "O3'" "HO3'" sing N N 30 AMP "C2'" "O2'" sing N N 31 AMP "C2'" "C1'" sing N N 32 AMP "C2'" "H2'" sing N N 33 AMP "O2'" "HO2'" sing N N 34 AMP "C1'" N9 sing N N 35 AMP "C1'" "H1'" sing N N 36 AMP N9 C8 sing Y N 37 AMP N9 C4 sing Y N 38 AMP C8 N7 doub Y N 39 AMP C8 H8 sing N N 40 AMP N7 C5 sing Y N 41 AMP C5 C6 sing Y N 42 AMP C5 C4 doub Y N 43 AMP C6 N6 sing N N 44 AMP C6 N1 doub Y N 45 AMP N6 HN61 sing N N 46 AMP N6 HN62 sing N N 47 AMP N1 C2 sing Y N 48 AMP C2 N3 doub Y N 49 AMP C2 H2 sing N N 50 AMP N3 C4 sing Y N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 DA OP3 P sing N N 122 DA OP3 HOP3 sing N N 123 DA P OP1 doub N N 124 DA P OP2 sing N N 125 DA P "O5'" sing N N 126 DA OP2 HOP2 sing N N 127 DA "O5'" "C5'" sing N N 128 DA "C5'" "C4'" sing N N 129 DA "C5'" "H5'" sing N N 130 DA "C5'" "H5''" sing N N 131 DA "C4'" "O4'" sing N N 132 DA "C4'" "C3'" sing N N 133 DA "C4'" "H4'" sing N N 134 DA "O4'" "C1'" sing N N 135 DA "C3'" "O3'" sing N N 136 DA "C3'" "C2'" sing N N 137 DA "C3'" "H3'" sing N N 138 DA "O3'" "HO3'" sing N N 139 DA "C2'" "C1'" sing N N 140 DA "C2'" "H2'" sing N N 141 DA "C2'" "H2''" sing N N 142 DA "C1'" N9 sing N N 143 DA "C1'" "H1'" sing N N 144 DA N9 C8 sing Y N 145 DA N9 C4 sing Y N 146 DA C8 N7 doub Y N 147 DA C8 H8 sing N N 148 DA N7 C5 sing Y N 149 DA C5 C6 sing Y N 150 DA C5 C4 doub Y N 151 DA C6 N6 sing N N 152 DA C6 N1 doub Y N 153 DA N6 H61 sing N N 154 DA N6 H62 sing N N 155 DA N1 C2 sing Y N 156 DA C2 N3 doub Y N 157 DA C2 H2 sing N N 158 DA N3 C4 sing Y N 159 DC OP3 P sing N N 160 DC OP3 HOP3 sing N N 161 DC P OP1 doub N N 162 DC P OP2 sing N N 163 DC P "O5'" sing N N 164 DC OP2 HOP2 sing N N 165 DC "O5'" "C5'" sing N N 166 DC "C5'" "C4'" sing N N 167 DC "C5'" "H5'" sing N N 168 DC "C5'" "H5''" sing N N 169 DC "C4'" "O4'" sing N N 170 DC "C4'" "C3'" sing N N 171 DC "C4'" "H4'" sing N N 172 DC "O4'" "C1'" sing N N 173 DC "C3'" "O3'" sing N N 174 DC "C3'" "C2'" sing N N 175 DC "C3'" "H3'" sing N N 176 DC "O3'" "HO3'" sing N N 177 DC "C2'" "C1'" sing N N 178 DC "C2'" "H2'" sing N N 179 DC "C2'" "H2''" sing N N 180 DC "C1'" N1 sing N N 181 DC "C1'" "H1'" sing N N 182 DC N1 C2 sing N N 183 DC N1 C6 sing N N 184 DC C2 O2 doub N N 185 DC C2 N3 sing N N 186 DC N3 C4 doub N N 187 DC C4 N4 sing N N 188 DC C4 C5 sing N N 189 DC N4 H41 sing N N 190 DC N4 H42 sing N N 191 DC C5 C6 doub N N 192 DC C5 H5 sing N N 193 DC C6 H6 sing N N 194 DG OP3 P sing N N 195 DG OP3 HOP3 sing N N 196 DG P OP1 doub N N 197 DG P OP2 sing N N 198 DG P "O5'" sing N N 199 DG OP2 HOP2 sing N N 200 DG "O5'" "C5'" sing N N 201 DG "C5'" "C4'" sing N N 202 DG "C5'" "H5'" sing N N 203 DG "C5'" "H5''" sing N N 204 DG "C4'" "O4'" sing N N 205 DG "C4'" "C3'" sing N N 206 DG "C4'" "H4'" sing N N 207 DG "O4'" "C1'" sing N N 208 DG "C3'" "O3'" sing N N 209 DG "C3'" "C2'" sing N N 210 DG "C3'" "H3'" sing N N 211 DG "O3'" "HO3'" sing N N 212 DG "C2'" "C1'" sing N N 213 DG "C2'" "H2'" sing N N 214 DG "C2'" "H2''" sing N N 215 DG "C1'" N9 sing N N 216 DG "C1'" "H1'" sing N N 217 DG N9 C8 sing Y N 218 DG N9 C4 sing Y N 219 DG C8 N7 doub Y N 220 DG C8 H8 sing N N 221 DG N7 C5 sing Y N 222 DG C5 C6 sing N N 223 DG C5 C4 doub Y N 224 DG C6 O6 doub N N 225 DG C6 N1 sing N N 226 DG N1 C2 sing N N 227 DG N1 H1 sing N N 228 DG C2 N2 sing N N 229 DG C2 N3 doub N N 230 DG N2 H21 sing N N 231 DG N2 H22 sing N N 232 DG N3 C4 sing N N 233 DT OP3 P sing N N 234 DT OP3 HOP3 sing N N 235 DT P OP1 doub N N 236 DT P OP2 sing N N 237 DT P "O5'" sing N N 238 DT OP2 HOP2 sing N N 239 DT "O5'" "C5'" sing N N 240 DT "C5'" "C4'" sing N N 241 DT "C5'" "H5'" sing N N 242 DT "C5'" "H5''" sing N N 243 DT "C4'" "O4'" sing N N 244 DT "C4'" "C3'" sing N N 245 DT "C4'" "H4'" sing N N 246 DT "O4'" "C1'" sing N N 247 DT "C3'" "O3'" sing N N 248 DT "C3'" "C2'" sing N N 249 DT "C3'" "H3'" sing N N 250 DT "O3'" "HO3'" sing N N 251 DT "C2'" "C1'" sing N N 252 DT "C2'" "H2'" sing N N 253 DT "C2'" "H2''" sing N N 254 DT "C1'" N1 sing N N 255 DT "C1'" "H1'" sing N N 256 DT N1 C2 sing N N 257 DT N1 C6 sing N N 258 DT C2 O2 doub N N 259 DT C2 N3 sing N N 260 DT N3 C4 sing N N 261 DT N3 H3 sing N N 262 DT C4 O4 doub N N 263 DT C4 C5 sing N N 264 DT C5 C7 sing N N 265 DT C5 C6 doub N N 266 DT C7 H71 sing N N 267 DT C7 H72 sing N N 268 DT C7 H73 sing N N 269 DT C6 H6 sing N N 270 GLN N CA sing N N 271 GLN N H sing N N 272 GLN N H2 sing N N 273 GLN CA C sing N N 274 GLN CA CB sing N N 275 GLN CA HA sing N N 276 GLN C O doub N N 277 GLN C OXT sing N N 278 GLN CB CG sing N N 279 GLN CB HB2 sing N N 280 GLN CB HB3 sing N N 281 GLN CG CD sing N N 282 GLN CG HG2 sing N N 283 GLN CG HG3 sing N N 284 GLN CD OE1 doub N N 285 GLN CD NE2 sing N N 286 GLN NE2 HE21 sing N N 287 GLN NE2 HE22 sing N N 288 GLN OXT HXT sing N N 289 GLU N CA sing N N 290 GLU N H sing N N 291 GLU N H2 sing N N 292 GLU CA C sing N N 293 GLU CA CB sing N N 294 GLU CA HA sing N N 295 GLU C O doub N N 296 GLU C OXT sing N N 297 GLU CB CG sing N N 298 GLU CB HB2 sing N N 299 GLU CB HB3 sing N N 300 GLU CG CD sing N N 301 GLU CG HG2 sing N N 302 GLU CG HG3 sing N N 303 GLU CD OE1 doub N N 304 GLU CD OE2 sing N N 305 GLU OE2 HE2 sing N N 306 GLU OXT HXT sing N N 307 GLY N CA sing N N 308 GLY N H sing N N 309 GLY N H2 sing N N 310 GLY CA C sing N N 311 GLY CA HA2 sing N N 312 GLY CA HA3 sing N N 313 GLY C O doub N N 314 GLY C OXT sing N N 315 GLY OXT HXT sing N N 316 HIS N CA sing N N 317 HIS N H sing N N 318 HIS N H2 sing N N 319 HIS CA C sing N N 320 HIS CA CB sing N N 321 HIS CA HA sing N N 322 HIS C O doub N N 323 HIS C OXT sing N N 324 HIS CB CG sing N N 325 HIS CB HB2 sing N N 326 HIS CB HB3 sing N N 327 HIS CG ND1 sing Y N 328 HIS CG CD2 doub Y N 329 HIS ND1 CE1 doub Y N 330 HIS ND1 HD1 sing N N 331 HIS CD2 NE2 sing Y N 332 HIS CD2 HD2 sing N N 333 HIS CE1 NE2 sing Y N 334 HIS CE1 HE1 sing N N 335 HIS NE2 HE2 sing N N 336 HIS OXT HXT sing N N 337 HOH O H1 sing N N 338 HOH O H2 sing N N 339 ILE N CA sing N N 340 ILE N H sing N N 341 ILE N H2 sing N N 342 ILE CA C sing N N 343 ILE CA CB sing N N 344 ILE CA HA sing N N 345 ILE C O doub N N 346 ILE C OXT sing N N 347 ILE CB CG1 sing N N 348 ILE CB CG2 sing N N 349 ILE CB HB sing N N 350 ILE CG1 CD1 sing N N 351 ILE CG1 HG12 sing N N 352 ILE CG1 HG13 sing N N 353 ILE CG2 HG21 sing N N 354 ILE CG2 HG22 sing N N 355 ILE CG2 HG23 sing N N 356 ILE CD1 HD11 sing N N 357 ILE CD1 HD12 sing N N 358 ILE CD1 HD13 sing N N 359 ILE OXT HXT sing N N 360 LEU N CA sing N N 361 LEU N H sing N N 362 LEU N H2 sing N N 363 LEU CA C sing N N 364 LEU CA CB sing N N 365 LEU CA HA sing N N 366 LEU C O doub N N 367 LEU C OXT sing N N 368 LEU CB CG sing N N 369 LEU CB HB2 sing N N 370 LEU CB HB3 sing N N 371 LEU CG CD1 sing N N 372 LEU CG CD2 sing N N 373 LEU CG HG sing N N 374 LEU CD1 HD11 sing N N 375 LEU CD1 HD12 sing N N 376 LEU CD1 HD13 sing N N 377 LEU CD2 HD21 sing N N 378 LEU CD2 HD22 sing N N 379 LEU CD2 HD23 sing N N 380 LEU OXT HXT sing N N 381 LYS N CA sing N N 382 LYS N H sing N N 383 LYS N H2 sing N N 384 LYS CA C sing N N 385 LYS CA CB sing N N 386 LYS CA HA sing N N 387 LYS C O doub N N 388 LYS C OXT sing N N 389 LYS CB CG sing N N 390 LYS CB HB2 sing N N 391 LYS CB HB3 sing N N 392 LYS CG CD sing N N 393 LYS CG HG2 sing N N 394 LYS CG HG3 sing N N 395 LYS CD CE sing N N 396 LYS CD HD2 sing N N 397 LYS CD HD3 sing N N 398 LYS CE NZ sing N N 399 LYS CE HE2 sing N N 400 LYS CE HE3 sing N N 401 LYS NZ HZ1 sing N N 402 LYS NZ HZ2 sing N N 403 LYS NZ HZ3 sing N N 404 LYS OXT HXT sing N N 405 MET N CA sing N N 406 MET N H sing N N 407 MET N H2 sing N N 408 MET CA C sing N N 409 MET CA CB sing N N 410 MET CA HA sing N N 411 MET C O doub N N 412 MET C OXT sing N N 413 MET CB CG sing N N 414 MET CB HB2 sing N N 415 MET CB HB3 sing N N 416 MET CG SD sing N N 417 MET CG HG2 sing N N 418 MET CG HG3 sing N N 419 MET SD CE sing N N 420 MET CE HE1 sing N N 421 MET CE HE2 sing N N 422 MET CE HE3 sing N N 423 MET OXT HXT sing N N 424 OMC N1 C2 sing N N 425 OMC N1 C6 sing N N 426 OMC N1 "C1'" sing N N 427 OMC C2 N3 sing N N 428 OMC C2 O2 doub N N 429 OMC N3 C4 doub N N 430 OMC C4 C5 sing N N 431 OMC C4 N4 sing N N 432 OMC C5 C6 doub N N 433 OMC C5 H5 sing N N 434 OMC C6 H6 sing N N 435 OMC N4 HN41 sing N N 436 OMC N4 HN42 sing N N 437 OMC "C1'" "C2'" sing N N 438 OMC "C1'" "O4'" sing N N 439 OMC "C1'" "H1'" sing N N 440 OMC "C2'" "O2'" sing N N 441 OMC "C2'" "C3'" sing N N 442 OMC "C2'" "H2'" sing N N 443 OMC "O2'" CM2 sing N N 444 OMC CM2 HM21 sing N N 445 OMC CM2 HM22 sing N N 446 OMC CM2 HM23 sing N N 447 OMC "C3'" "C4'" sing N N 448 OMC "C3'" "O3'" sing N N 449 OMC "C3'" "H3'" sing N N 450 OMC "C4'" "O4'" sing N N 451 OMC "C4'" "C5'" sing N N 452 OMC "C4'" "H4'" sing N N 453 OMC "O3'" "HO3'" sing N N 454 OMC "C5'" "O5'" sing N N 455 OMC "C5'" "H5'" sing N N 456 OMC "C5'" "H5''" sing N N 457 OMC "O5'" P sing N N 458 OMC P OP1 doub N N 459 OMC P OP2 sing N N 460 OMC P OP3 sing N N 461 OMC OP2 HOP2 sing N N 462 OMC OP3 HOP3 sing N N 463 PHE N CA sing N N 464 PHE N H sing N N 465 PHE N H2 sing N N 466 PHE CA C sing N N 467 PHE CA CB sing N N 468 PHE CA HA sing N N 469 PHE C O doub N N 470 PHE C OXT sing N N 471 PHE CB CG sing N N 472 PHE CB HB2 sing N N 473 PHE CB HB3 sing N N 474 PHE CG CD1 doub Y N 475 PHE CG CD2 sing Y N 476 PHE CD1 CE1 sing Y N 477 PHE CD1 HD1 sing N N 478 PHE CD2 CE2 doub Y N 479 PHE CD2 HD2 sing N N 480 PHE CE1 CZ doub Y N 481 PHE CE1 HE1 sing N N 482 PHE CE2 CZ sing Y N 483 PHE CE2 HE2 sing N N 484 PHE CZ HZ sing N N 485 PHE OXT HXT sing N N 486 PRO N CA sing N N 487 PRO N CD sing N N 488 PRO N H sing N N 489 PRO CA C sing N N 490 PRO CA CB sing N N 491 PRO CA HA sing N N 492 PRO C O doub N N 493 PRO C OXT sing N N 494 PRO CB CG sing N N 495 PRO CB HB2 sing N N 496 PRO CB HB3 sing N N 497 PRO CG CD sing N N 498 PRO CG HG2 sing N N 499 PRO CG HG3 sing N N 500 PRO CD HD2 sing N N 501 PRO CD HD3 sing N N 502 PRO OXT HXT sing N N 503 SER N CA sing N N 504 SER N H sing N N 505 SER N H2 sing N N 506 SER CA C sing N N 507 SER CA CB sing N N 508 SER CA HA sing N N 509 SER C O doub N N 510 SER C OXT sing N N 511 SER CB OG sing N N 512 SER CB HB2 sing N N 513 SER CB HB3 sing N N 514 SER OG HG sing N N 515 SER OXT HXT sing N N 516 THR N CA sing N N 517 THR N H sing N N 518 THR N H2 sing N N 519 THR CA C sing N N 520 THR CA CB sing N N 521 THR CA HA sing N N 522 THR C O doub N N 523 THR C OXT sing N N 524 THR CB OG1 sing N N 525 THR CB CG2 sing N N 526 THR CB HB sing N N 527 THR OG1 HG1 sing N N 528 THR CG2 HG21 sing N N 529 THR CG2 HG22 sing N N 530 THR CG2 HG23 sing N N 531 THR OXT HXT sing N N 532 TRP N CA sing N N 533 TRP N H sing N N 534 TRP N H2 sing N N 535 TRP CA C sing N N 536 TRP CA CB sing N N 537 TRP CA HA sing N N 538 TRP C O doub N N 539 TRP C OXT sing N N 540 TRP CB CG sing N N 541 TRP CB HB2 sing N N 542 TRP CB HB3 sing N N 543 TRP CG CD1 doub Y N 544 TRP CG CD2 sing Y N 545 TRP CD1 NE1 sing Y N 546 TRP CD1 HD1 sing N N 547 TRP CD2 CE2 doub Y N 548 TRP CD2 CE3 sing Y N 549 TRP NE1 CE2 sing Y N 550 TRP NE1 HE1 sing N N 551 TRP CE2 CZ2 sing Y N 552 TRP CE3 CZ3 doub Y N 553 TRP CE3 HE3 sing N N 554 TRP CZ2 CH2 doub Y N 555 TRP CZ2 HZ2 sing N N 556 TRP CZ3 CH2 sing Y N 557 TRP CZ3 HZ3 sing N N 558 TRP CH2 HH2 sing N N 559 TRP OXT HXT sing N N 560 TYR N CA sing N N 561 TYR N H sing N N 562 TYR N H2 sing N N 563 TYR CA C sing N N 564 TYR CA CB sing N N 565 TYR CA HA sing N N 566 TYR C O doub N N 567 TYR C OXT sing N N 568 TYR CB CG sing N N 569 TYR CB HB2 sing N N 570 TYR CB HB3 sing N N 571 TYR CG CD1 doub Y N 572 TYR CG CD2 sing Y N 573 TYR CD1 CE1 sing Y N 574 TYR CD1 HD1 sing N N 575 TYR CD2 CE2 doub Y N 576 TYR CD2 HD2 sing N N 577 TYR CE1 CZ doub Y N 578 TYR CE1 HE1 sing N N 579 TYR CE2 CZ sing Y N 580 TYR CE2 HE2 sing N N 581 TYR CZ OH sing N N 582 TYR OH HH sing N N 583 TYR OXT HXT sing N N 584 VAL N CA sing N N 585 VAL N H sing N N 586 VAL N H2 sing N N 587 VAL CA C sing N N 588 VAL CA CB sing N N 589 VAL CA HA sing N N 590 VAL C O doub N N 591 VAL C OXT sing N N 592 VAL CB CG1 sing N N 593 VAL CB CG2 sing N N 594 VAL CB HB sing N N 595 VAL CG1 HG11 sing N N 596 VAL CG1 HG12 sing N N 597 VAL CG1 HG13 sing N N 598 VAL CG2 HG21 sing N N 599 VAL CG2 HG22 sing N N 600 VAL CG2 HG23 sing N N 601 VAL OXT HXT sing N N 602 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2Q2T 'double helix' 2Q2T 'a-form double helix' 2Q2T 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 C DA 11 1_555 -0.143 -0.109 -0.099 -7.220 -12.392 3.498 1 B_DT1:DA42_D B 1 ? D 42 ? 20 1 1 A DT 2 1_555 C DA 10 1_555 -0.101 -0.079 -0.116 3.044 -19.127 1.109 2 B_DT2:DA41_D B 2 ? D 41 ? 20 1 1 A DC 3 1_555 C DG 9 1_555 0.113 -0.095 0.205 -10.229 -9.025 0.611 3 B_DC3:DG40_D B 3 ? D 40 ? 19 1 1 A DC 4 1_555 C DG 8 1_555 0.036 0.232 0.326 -9.255 -7.260 0.987 4 B_DC4:DG39_D B 4 ? D 39 ? 19 1 1 A DG 5 1_555 C DC 7 1_555 0.191 -0.210 -0.180 -6.563 -11.138 -1.431 5 B_DG5:DC38_D B 5 ? D 38 ? 19 1 1 A DA 6 1_555 C DT 6 1_555 -0.332 -0.071 -0.267 -8.335 -6.715 2.047 6 B_DA6:DT37_D B 6 ? D 37 ? 20 1 1 A DT 7 1_555 C DA 5 1_555 0.333 -0.106 -0.126 -0.229 -7.611 4.562 7 B_DT7:DA36_D B 7 ? D 36 ? 20 1 1 A DA 8 1_555 C DT 4 1_555 0.049 0.016 -0.128 -1.369 -9.398 -3.514 8 B_DA8:DT35_D B 8 ? D 35 ? 20 1 1 A DG 9 1_555 C DC 3 1_555 0.006 0.044 -0.144 1.268 -8.403 4.470 9 B_DG9:DC34_D B 9 ? D 34 ? 19 1 1 A DT 10 1_555 C DA 2 1_555 -0.018 -0.042 -0.489 4.982 -5.390 -4.151 10 B_DT10:DA33_D B 10 ? D 33 ? 20 1 1 A DG 11 1_555 C DC 1 1_555 -0.188 -0.274 -0.385 -8.412 -13.002 1.225 11 B_DG11:DC32_D B 11 ? D 32 ? 19 1 1 A DG 12 1_555 B DC 10 1_555 -0.006 -0.268 -0.316 -4.464 -7.854 1.662 12 B_DG12:DC31_C B 12 ? C 31 ? 19 1 1 A DG 13 1_555 B OMC 9 1_555 -0.103 -0.160 0.302 6.647 -10.204 -2.472 13 B_DG13:OMC30_C B 13 ? C 30 ? 19 1 1 A DG 14 1_555 B DC 8 1_555 -0.287 0.156 -0.189 -4.571 -3.631 5.829 14 B_DG14:DC29_C B 14 ? C 29 ? 19 1 1 A DT 15 1_555 B DA 7 1_555 -0.053 -0.025 -0.107 5.602 -8.161 -1.153 15 B_DT15:DA28_C B 15 ? C 28 ? 20 1 1 A DC 16 1_555 B DG 6 1_555 -0.194 -0.153 -0.070 -2.594 -8.029 -3.254 16 B_DC16:DG27_C B 16 ? C 27 ? 19 1 1 A DG 17 1_555 B DC 5 1_555 0.204 -0.082 0.084 -3.038 -6.723 -0.395 17 B_DG17:DC26_C B 17 ? C 26 ? 19 1 1 A DC 18 1_555 B DG 4 1_555 0.347 -0.125 -0.296 8.931 -5.599 0.463 18 B_DC18:DG25_C B 18 ? C 25 ? 19 1 1 A DA 19 1_555 B DT 3 1_555 0.102 -0.007 0.120 6.003 -15.920 2.379 19 B_DA19:DT24_C B 19 ? C 24 ? 20 1 1 A DA 20 1_555 B DT 2 1_555 0.155 -0.098 0.011 0.751 -16.265 7.138 20 B_DA20:DT23_C B 20 ? C 23 ? 20 1 1 A DT 21 1_555 B DA 1 1_555 0.080 0.016 0.005 0.576 -11.594 6.134 21 B_DT21:DA22_C B 21 ? C 22 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 C DA 11 1_555 A DT 2 1_555 C DA 10 1_555 -0.343 -0.098 3.013 -0.122 -3.647 38.173 0.272 0.508 3.011 -5.561 0.186 38.340 1 BB_DT1DT2:DA41DA42_DD B 1 ? D 42 ? B 2 ? D 41 ? 1 A DT 2 1_555 C DA 10 1_555 A DC 3 1_555 C DG 9 1_555 0.403 0.056 3.657 -1.299 -3.480 42.488 0.467 -0.699 3.628 -4.791 1.789 42.643 2 BB_DT2DC3:DG40DA41_DD B 2 ? D 41 ? B 3 ? D 40 ? 1 A DC 3 1_555 C DG 9 1_555 A DC 4 1_555 C DG 8 1_555 0.229 0.115 3.303 -0.351 1.702 34.652 -0.071 -0.439 3.302 2.855 0.588 34.694 3 BB_DC3DC4:DG39DG40_DD B 3 ? D 40 ? B 4 ? D 39 ? 1 A DC 4 1_555 C DG 8 1_555 A DG 5 1_555 C DC 7 1_555 -0.724 0.748 3.313 1.329 3.449 37.764 0.702 1.287 3.339 5.313 -2.048 37.938 4 BB_DC4DG5:DC38DG39_DD B 4 ? D 39 ? B 5 ? D 38 ? 1 A DG 5 1_555 C DC 7 1_555 A DA 6 1_555 C DT 6 1_555 0.049 0.173 3.331 -1.853 7.722 30.363 -1.170 -0.448 3.266 14.436 3.464 31.361 5 BB_DG5DA6:DT37DC38_DD B 5 ? D 38 ? B 6 ? D 37 ? 1 A DA 6 1_555 C DT 6 1_555 A DT 7 1_555 C DA 5 1_555 0.028 -0.407 3.127 -0.602 4.234 34.144 -1.314 -0.136 3.055 7.177 1.020 34.403 6 BB_DA6DT7:DA36DT37_DD B 6 ? D 37 ? B 7 ? D 36 ? 1 A DT 7 1_555 C DA 5 1_555 A DA 8 1_555 C DT 4 1_555 -0.439 0.040 3.372 -0.870 4.233 34.497 -0.601 0.597 3.363 7.103 1.460 34.758 7 BB_DT7DA8:DT35DA36_DD B 7 ? D 36 ? B 8 ? D 35 ? 1 A DA 8 1_555 C DT 4 1_555 A DG 9 1_555 C DC 3 1_555 1.048 -0.525 3.410 -1.166 2.279 31.378 -1.407 -2.156 3.324 4.205 2.152 31.480 8 BB_DA8DG9:DC34DT35_DD B 8 ? D 35 ? B 9 ? D 34 ? 1 A DG 9 1_555 C DC 3 1_555 A DT 10 1_555 C DA 2 1_555 -1.032 -0.938 3.199 0.421 1.980 30.030 -2.197 2.071 3.118 3.816 -0.811 30.097 9 BB_DG9DT10:DA33DC34_DD B 9 ? D 34 ? B 10 ? D 33 ? 1 A DT 10 1_555 C DA 2 1_555 A DG 11 1_555 C DC 1 1_555 0.695 -1.181 3.731 -3.937 17.047 31.475 -4.470 -1.717 2.663 28.809 6.654 35.903 10 BB_DT10DG11:DC32DA33_DD B 10 ? D 33 ? B 11 ? D 32 ? 1 A DG 11 1_555 C DC 1 1_555 A DG 12 1_555 B DC 10 1_555 -1.781 -1.959 3.205 -5.934 10.091 22.348 -7.225 2.477 2.487 24.032 14.132 25.194 11 BB_DG11DG12:DC31DC32_CD B 11 ? D 32 ? B 12 ? C 31 ? 1 A DG 12 1_555 B DC 10 1_555 A DG 13 1_555 B OMC 9 1_555 -0.633 -0.854 2.953 -6.481 9.843 33.096 -2.726 0.188 2.672 16.636 10.953 35.076 12 BB_DG12DG13:OMC30DC31_CC B 12 ? C 31 ? B 13 ? C 30 ? 1 A DG 13 1_555 B OMC 9 1_555 A DG 14 1_555 B DC 8 1_555 1.009 -0.901 3.628 4.883 2.030 27.702 -2.383 -0.788 3.674 4.191 -10.082 28.193 13 BB_DG13DG14:DC29OMC30_CC B 13 ? C 30 ? B 14 ? C 29 ? 1 A DG 14 1_555 B DC 8 1_555 A DT 15 1_555 B DA 7 1_555 -0.909 -0.648 2.995 -0.090 5.063 34.228 -1.795 1.516 2.874 8.545 0.151 34.589 14 BB_DG14DT15:DA28DC29_CC B 14 ? C 29 ? B 15 ? C 28 ? 1 A DT 15 1_555 B DA 7 1_555 A DC 16 1_555 B DG 6 1_555 -0.253 -0.314 3.528 -0.136 1.667 38.140 -0.707 0.369 3.512 2.550 0.207 38.175 15 BB_DT15DC16:DG27DA28_CC B 15 ? C 28 ? B 16 ? C 27 ? 1 A DC 16 1_555 B DG 6 1_555 A DG 17 1_555 B DC 5 1_555 0.163 0.342 3.306 -0.319 3.277 41.713 0.132 -0.261 3.321 4.594 0.447 41.837 16 BB_DC16DG17:DC26DG27_CC B 16 ? C 27 ? B 17 ? C 26 ? 1 A DG 17 1_555 B DC 5 1_555 A DC 18 1_555 B DG 4 1_555 0.471 0.277 2.937 3.689 7.176 26.916 -0.981 -0.172 2.948 14.993 -7.708 28.078 17 BB_DG17DC18:DG25DC26_CC B 17 ? C 26 ? B 18 ? C 25 ? 1 A DC 18 1_555 B DG 4 1_555 A DA 19 1_555 B DT 3 1_555 -0.394 1.160 3.383 -2.279 5.641 36.906 1.019 0.295 3.533 8.837 3.570 37.387 18 BB_DC18DA19:DT24DG25_CC B 18 ? C 25 ? B 19 ? C 24 ? 1 A DA 19 1_555 B DT 3 1_555 A DA 20 1_555 B DT 2 1_555 0.214 -0.005 3.368 1.583 1.201 36.326 -0.180 -0.116 3.373 1.925 -2.537 36.379 19 BB_DA19DA20:DT23DT24_CC B 19 ? C 24 ? B 20 ? C 23 ? 1 A DA 20 1_555 B DT 2 1_555 A DT 21 1_555 B DA 1 1_555 0.409 -0.674 3.248 0.297 0.389 34.374 -1.201 -0.646 3.244 0.658 -0.502 34.378 20 BB_DA20DT21:DA22DT23_CC B 20 ? C 23 ? B 21 ? C 22 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FVI _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 2Q2T _atom_sites.fract_transf_matrix[1][1] 0.015083 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012302 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010372 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_