HEADER CELL CYCLE 29-MAY-07 2Q2Y TITLE CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF11; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KINESIN-RELATED MOTOR PROTEIN EG5, KINESIN-LIKE SPINDLE COMPND 5 PROTEIN HKSP, THYROID RECEPTOR-INTERACTING PROTEIN 5, TRIP-5, COMPND 6 KINESIN-LIKE PROTEIN 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIF11, EG5, KNSL1, TRIP5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DZ3 KEYWDS KSP, KSP-INHIBITOR COMPLEX, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR Y.YAN REVDAT 4 21-FEB-24 2Q2Y 1 REMARK LINK REVDAT 3 24-FEB-09 2Q2Y 1 VERSN REVDAT 2 09-OCT-07 2Q2Y 1 JRNL REVDAT 1 18-SEP-07 2Q2Y 0 JRNL AUTH A.J.ROECKER,P.J.COLEMAN,S.P.MERCER,J.D.SCHREIER,C.A.BUSER, JRNL AUTH 2 E.S.WALSH,K.HAMILTON,R.B.LOBELL,W.TAO,R.E.DIEHL,V.J.SOUTH, JRNL AUTH 3 J.P.DAVIDE,N.E.KOHL,Y.YAN,L.C.KUO,C.LI,C.FERNANDEZ-METZLER, JRNL AUTH 4 E.A.MAHAN,T.PRUEKSARITANONT,G.D.HARTMAN JRNL TITL KINESIN SPINDLE PROTEIN (KSP) INHIBITORS. PART 8: DESIGN AND JRNL TITL 2 SYNTHESIS OF 1,4-DIARYL-4,5-DIHYDROPYRAZOLES AS POTENT JRNL TITL 3 INHIBITORS OF THE MITOTIC KINESIN KSP. JRNL REF BIOORG.MED.CHEM.LETT. V. 17 5677 2007 JRNL REFN ISSN 0960-894X JRNL PMID 17766111 JRNL DOI 10.1016/J.BMCL.2007.07.074 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 1.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1572 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.65 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.79 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4935 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 19.830 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4668 REMARK 3 BIN R VALUE (WORKING SET) : 0.1937 REMARK 3 BIN FREE R VALUE : 0.2781 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 267 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 126 REMARK 3 SOLVENT ATOMS : 245 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.20433 REMARK 3 B22 (A**2) : 0.07040 REMARK 3 B33 (A**2) : 1.13393 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5402 ; 2.000 ; NULL REMARK 3 BOND ANGLES : 7302 ; 2.000 ; NULL REMARK 3 TORSION ANGLES : 1226 ; 0.000 ; NULL REMARK 3 TRIGONAL CARBON PLANES : 166 ; 2.000 ; NULL REMARK 3 GENERAL PLANES : 778 ; 5.000 ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : 5404 ; 20.000 ; NULL REMARK 3 BAD NON-BONDED CONTACTS : 106 ; 5.000 ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Q2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000043082. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : BLUE CONFOCAL OPTICAL SYSTEM REMARK 200 OPTICS : BLUE MAX-FLUX CONFOCAL OPTICAL REMARK 200 SYSTEM REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31187 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 39.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : 0.10700 REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39700 REMARK 200 R SYM FOR SHELL (I) : 0.39700 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, POTASSIUM PHOSPHATE, PH 8.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.43000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.78500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.78500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.43000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS MOTOR DOMAIN IS A PART OF A MULTI-DOMAIN PROTEIN THAT REMARK 300 FORMS A TETRAMER. THERE ARE TWO MONOMERS IN AN ASYMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 PRO A 5 REMARK 465 ASN A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 ALA A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 LYS A 12 REMARK 465 GLU A 13 REMARK 465 GLU A 14 REMARK 465 LYS A 15 REMARK 465 GLY A 16 REMARK 465 LYS A 17 REMARK 465 ILE A 272 REMARK 465 GLY A 273 REMARK 465 ARG A 274 REMARK 465 SER A 275 REMARK 465 GLY A 276 REMARK 465 ALA A 277 REMARK 465 VAL A 278 REMARK 465 ASP A 279 REMARK 465 LYS A 280 REMARK 465 ARG A 281 REMARK 465 ALA A 282 REMARK 465 ARG A 283 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 GLY A 286 REMARK 465 PRO A 363 REMARK 465 GLU A 364 REMARK 465 VAL A 365 REMARK 465 ASN A 366 REMARK 465 GLN A 367 REMARK 465 LYS A 368 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 PRO B 5 REMARK 465 ASN B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 ALA B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 LYS B 12 REMARK 465 GLU B 13 REMARK 465 GLU B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 16 REMARK 465 LYS B 17 REMARK 465 ILE B 272 REMARK 465 GLY B 273 REMARK 465 ARG B 274 REMARK 465 SER B 275 REMARK 465 GLY B 276 REMARK 465 ALA B 277 REMARK 465 VAL B 278 REMARK 465 ASP B 279 REMARK 465 LYS B 280 REMARK 465 ARG B 281 REMARK 465 ALA B 282 REMARK 465 ARG B 283 REMARK 465 GLU B 284 REMARK 465 ALA B 285 REMARK 465 GLY B 286 REMARK 465 PRO B 363 REMARK 465 GLU B 364 REMARK 465 VAL B 365 REMARK 465 ASN B 366 REMARK 465 GLN B 367 REMARK 465 LYS B 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 121 C - N - CA ANGL. DEV. = 15.0 DEGREES REMARK 500 PRO A 121 C - N - CD ANGL. DEV. = -14.6 DEGREES REMARK 500 PRO A 188 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 ARG A 297 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 PRO B 188 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 30 -19.55 -40.71 REMARK 500 SER A 36 73.79 32.99 REMARK 500 LEU A 57 138.07 53.72 REMARK 500 MET A 70 143.65 -173.96 REMARK 500 LYS A 146 -62.24 -98.52 REMARK 500 ASP A 149 -82.47 -51.81 REMARK 500 ASN A 150 156.87 -39.96 REMARK 500 VAL A 178 13.54 -63.40 REMARK 500 ARG A 189 -99.56 -68.20 REMARK 500 ASP A 208 22.43 -66.58 REMARK 500 VAL A 210 -71.32 -72.20 REMARK 500 TYR A 211 -32.02 -35.52 REMARK 500 GLU A 247 153.80 -45.65 REMARK 500 THR A 248 78.98 -156.40 REMARK 500 ARG A 305 18.74 52.98 REMARK 500 PRO A 310 49.52 -76.33 REMARK 500 ARG A 312 -5.11 -54.71 REMARK 500 LEU A 343 -62.02 -27.64 REMARK 500 ASN A 361 -134.14 -133.68 REMARK 500 PRO B 27 -164.37 -62.06 REMARK 500 ALA B 35 26.08 -158.28 REMARK 500 SER B 36 82.73 38.89 REMARK 500 SER B 159 138.81 -173.71 REMARK 500 ARG B 189 -74.69 -56.57 REMARK 500 ARG B 305 51.54 38.38 REMARK 500 PRO B 310 44.56 -62.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 112 OG1 REMARK 620 2 ADP A 601 O3B 77.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 112 OG1 REMARK 620 2 ADP B 602 O3B 79.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MKR A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MKR B 605 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q2Z RELATED DB: PDB DBREF 2Q2Y A 2 368 UNP P52732 KIF11_HUMAN 2 368 DBREF 2Q2Y B 2 368 UNP P52732 KIF11_HUMAN 2 368 SEQRES 1 A 367 ALA SER GLN PRO ASN SER SER ALA LYS LYS LYS GLU GLU SEQRES 2 A 367 LYS GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG PRO SEQRES 3 A 367 PHE ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER ILE SEQRES 4 A 367 VAL GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL ARG SEQRES 5 A 367 THR GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR TYR SEQRES 6 A 367 THR PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN ILE SEQRES 7 A 367 ASP VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP GLU SEQRES 8 A 367 VAL ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR GLY SEQRES 9 A 367 GLN THR GLY THR GLY LYS THR PHE THR MET GLU GLY GLU SEQRES 10 A 367 ARG SER PRO ASN GLU GLU TYR THR TRP GLU GLU ASP PRO SEQRES 11 A 367 LEU ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE PHE SEQRES 12 A 367 GLU LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL LYS SEQRES 13 A 367 VAL SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE ASP SEQRES 14 A 367 LEU LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU GLN SEQRES 15 A 367 MET PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE ILE SEQRES 16 A 367 LYS GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP GLU SEQRES 17 A 367 VAL TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG THR SEQRES 18 A 367 THR ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SER SEQRES 19 A 367 HIS SER VAL PHE SER VAL THR ILE HIS MET LYS GLU THR SEQRES 20 A 367 THR ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS LEU SEQRES 21 A 367 ASN LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY ARG SEQRES 22 A 367 SER GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY ASN SEQRES 23 A 367 ILE ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE THR SEQRES 24 A 367 ALA LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG GLU SEQRES 25 A 367 SER LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY GLY SEQRES 26 A 367 ARG THR ARG THR SER ILE ILE ALA THR ILE SER PRO ALA SEQRES 27 A 367 SER LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU TYR SEQRES 28 A 367 ALA HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO GLU VAL SEQRES 29 A 367 ASN GLN LYS SEQRES 1 B 367 ALA SER GLN PRO ASN SER SER ALA LYS LYS LYS GLU GLU SEQRES 2 B 367 LYS GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG PRO SEQRES 3 B 367 PHE ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER ILE SEQRES 4 B 367 VAL GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL ARG SEQRES 5 B 367 THR GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR TYR SEQRES 6 B 367 THR PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN ILE SEQRES 7 B 367 ASP VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP GLU SEQRES 8 B 367 VAL ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR GLY SEQRES 9 B 367 GLN THR GLY THR GLY LYS THR PHE THR MET GLU GLY GLU SEQRES 10 B 367 ARG SER PRO ASN GLU GLU TYR THR TRP GLU GLU ASP PRO SEQRES 11 B 367 LEU ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE PHE SEQRES 12 B 367 GLU LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL LYS SEQRES 13 B 367 VAL SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE ASP SEQRES 14 B 367 LEU LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU GLN SEQRES 15 B 367 MET PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE ILE SEQRES 16 B 367 LYS GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP GLU SEQRES 17 B 367 VAL TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG THR SEQRES 18 B 367 THR ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SER SEQRES 19 B 367 HIS SER VAL PHE SER VAL THR ILE HIS MET LYS GLU THR SEQRES 20 B 367 THR ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS LEU SEQRES 21 B 367 ASN LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY ARG SEQRES 22 B 367 SER GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY ASN SEQRES 23 B 367 ILE ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE THR SEQRES 24 B 367 ALA LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG GLU SEQRES 25 B 367 SER LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY GLY SEQRES 26 B 367 ARG THR ARG THR SER ILE ILE ALA THR ILE SER PRO ALA SEQRES 27 B 367 SER LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU TYR SEQRES 28 B 367 ALA HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO GLU VAL SEQRES 29 B 367 ASN GLN LYS HET MG A 603 1 HET ADP A 601 27 HET MKR A 604 35 HET MG B 604 1 HET ADP B 602 27 HET MKR B 605 35 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MKR 1-{(3R,3AR)-3-[3-(4-ACETYLPIPERAZIN-1-YL)PROPYL]-8- HETNAM 2 MKR FLUORO-3-PHENYL-3A,4-DIHYDRO-3H-PYRAZOLO[5,1-C][1, HETNAM 3 MKR 4]BENZOXAZIN-2-YL}ETHANONE FORMUL 3 MG 2(MG 2+) FORMUL 4 ADP 2(C10 H15 N5 O10 P2) FORMUL 5 MKR 2(C27 H31 F N4 O3) FORMUL 9 HOH *245(H2 O) HELIX 1 1 ASN A 29 ALA A 35 1 7 HELIX 2 2 LYS A 77 VAL A 85 1 9 HELIX 3 3 VAL A 85 MET A 95 1 11 HELIX 4 4 GLY A 110 GLU A 116 1 7 HELIX 5 5 GLY A 134 THR A 148 1 15 HELIX 6 6 ASN A 206 ASP A 208 5 3 HELIX 7 7 GLU A 209 MET A 228 1 20 HELIX 8 8 ALA A 230 SER A 235 1 6 HELIX 9 9 ASN A 289 GLU A 304 1 16 HELIX 10 10 PRO A 310 GLU A 313 5 4 HELIX 11 11 SER A 314 LEU A 320 1 7 HELIX 12 12 GLN A 321 LEU A 324 5 4 HELIX 13 13 ALA A 339 LEU A 341 5 3 HELIX 14 14 ASN A 342 LYS A 357 1 16 HELIX 15 15 LYS B 77 VAL B 85 1 9 HELIX 16 16 VAL B 85 MET B 95 1 11 HELIX 17 17 GLY B 110 GLU B 116 1 7 HELIX 18 18 SER B 120 GLU B 124 5 5 HELIX 19 19 GLY B 134 LEU B 147 1 14 HELIX 20 20 GLU B 209 MET B 228 1 20 HELIX 21 21 ALA B 230 SER B 235 1 6 HELIX 22 22 ASN B 289 GLU B 304 1 16 HELIX 23 23 PRO B 310 GLU B 313 5 4 HELIX 24 24 SER B 314 LEU B 320 1 7 HELIX 25 25 GLN B 321 LEU B 324 5 4 HELIX 26 26 ALA B 339 LEU B 341 5 3 HELIX 27 27 ASN B 342 LYS B 357 1 16 SHEET 1 A 8 MET A 70 PHE A 72 0 SHEET 2 A 8 GLN A 20 CYS A 25 1 N CYS A 25 O PHE A 72 SHEET 3 A 8 ARG A 329 ILE A 336 1 O ILE A 332 N VAL A 22 SHEET 4 A 8 ASN A 98 GLY A 105 1 N TYR A 104 O THR A 335 SHEET 5 A 8 GLU A 253 ASP A 265 1 O VAL A 264 N ILE A 101 SHEET 6 A 8 HIS A 236 THR A 249 -1 N ILE A 243 O GLY A 259 SHEET 7 A 8 PHE A 154 TYR A 164 -1 N SER A 159 O SER A 240 SHEET 8 A 8 GLU A 167 ASP A 170 -1 O PHE A 169 N GLU A 162 SHEET 1 B 8 MET A 70 PHE A 72 0 SHEET 2 B 8 GLN A 20 CYS A 25 1 N CYS A 25 O PHE A 72 SHEET 3 B 8 ARG A 329 ILE A 336 1 O ILE A 332 N VAL A 22 SHEET 4 B 8 ASN A 98 GLY A 105 1 N TYR A 104 O THR A 335 SHEET 5 B 8 GLU A 253 ASP A 265 1 O VAL A 264 N ILE A 101 SHEET 6 B 8 HIS A 236 THR A 249 -1 N ILE A 243 O GLY A 259 SHEET 7 B 8 PHE A 154 TYR A 164 -1 N SER A 159 O SER A 240 SHEET 8 B 8 ILE A 202 VAL A 204 -1 O VAL A 204 N VAL A 156 SHEET 1 C 3 VAL A 41 ASP A 44 0 SHEET 2 C 3 GLU A 49 ARG A 53 -1 O GLU A 49 N ASP A 44 SHEET 3 C 3 ARG A 63 THR A 67 -1 O LYS A 64 N VAL A 52 SHEET 1 D 2 GLN A 183 ASP A 186 0 SHEET 2 D 2 VAL A 194 LYS A 197 -1 O ILE A 195 N PHE A 185 SHEET 1 E 8 MET B 70 PHE B 72 0 SHEET 2 E 8 GLN B 20 CYS B 25 1 N CYS B 25 O PHE B 72 SHEET 3 E 8 ARG B 329 ILE B 336 1 O ALA B 334 N VAL B 22 SHEET 4 E 8 ASN B 98 GLY B 105 1 N TYR B 104 O ILE B 333 SHEET 5 E 8 GLU B 254 ASP B 265 1 O LYS B 260 N CYS B 99 SHEET 6 E 8 HIS B 236 THR B 248 -1 N GLU B 247 O LEU B 255 SHEET 7 E 8 GLU B 153 TYR B 164 -1 N LEU B 161 O VAL B 238 SHEET 8 E 8 GLU B 167 ASP B 170 -1 O PHE B 169 N GLU B 162 SHEET 1 F 8 MET B 70 PHE B 72 0 SHEET 2 F 8 GLN B 20 CYS B 25 1 N CYS B 25 O PHE B 72 SHEET 3 F 8 ARG B 329 ILE B 336 1 O ALA B 334 N VAL B 22 SHEET 4 F 8 ASN B 98 GLY B 105 1 N TYR B 104 O ILE B 333 SHEET 5 F 8 GLU B 254 ASP B 265 1 O LYS B 260 N CYS B 99 SHEET 6 F 8 HIS B 236 THR B 248 -1 N GLU B 247 O LEU B 255 SHEET 7 F 8 GLU B 153 TYR B 164 -1 N LEU B 161 O VAL B 238 SHEET 8 F 8 ILE B 202 VAL B 204 -1 O VAL B 204 N VAL B 156 SHEET 1 G 3 VAL B 41 ASP B 44 0 SHEET 2 G 3 GLU B 49 GLY B 56 -1 O SER B 51 N GLU B 42 SHEET 3 G 3 SER B 61 THR B 67 -1 O LYS B 64 N VAL B 52 SHEET 1 H 2 GLN B 183 ASP B 186 0 SHEET 2 H 2 VAL B 194 LYS B 197 -1 O ILE B 195 N PHE B 185 LINK OG1 THR A 112 MG MG A 603 1555 1555 2.46 LINK O3B ADP A 601 MG MG A 603 1555 1555 2.57 LINK OG1 THR B 112 MG MG B 604 1555 1555 2.18 LINK O3B ADP B 602 MG MG B 604 1555 1555 2.43 SITE 1 AC1 2 THR A 112 ADP A 601 SITE 1 AC2 3 THR B 112 SER B 232 ADP B 602 SITE 1 AC3 16 ARG A 24 ARG A 26 PRO A 27 GLN A 106 SITE 2 AC3 16 GLY A 108 THR A 109 GLY A 110 LYS A 111 SITE 3 AC3 16 THR A 112 PHE A 113 GLU A 118 MG A 603 SITE 4 AC3 16 HOH A 632 HOH A 652 HOH A 684 HOH A 714 SITE 1 AC4 10 ARG B 26 THR B 107 GLY B 108 GLY B 110 SITE 2 AC4 10 LYS B 111 THR B 112 PHE B 113 GLU B 118 SITE 3 AC4 10 MG B 604 HOH B 721 SITE 1 AC5 12 GLU A 116 GLU A 118 ARG A 119 TRP A 127 SITE 2 AC5 12 LEU A 160 TYR A 211 LEU A 214 GLU A 215 SITE 3 AC5 12 GLY A 217 ALA B 218 ALA B 219 THR B 222 SITE 1 AC6 14 ALA A 218 ALA A 219 THR A 222 GLU B 116 SITE 2 AC6 14 GLY B 117 GLU B 118 ARG B 119 TRP B 127 SITE 3 AC6 14 ALA B 133 PRO B 137 LEU B 160 TYR B 211 SITE 4 AC6 14 LEU B 214 GLU B 215 CRYST1 68.860 79.800 159.570 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014522 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012531 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006267 0.00000