HEADER TRANSPORT PROTEIN 09-JUN-07 2Q88 TITLE CRYSTAL STRUCTURE OF EHUB IN COMPLEX WITH ECTOINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ABC TRANSPORTER AMINO ACID-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EHUB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; SOURCE 3 ORGANISM_TAXID: 382; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS SUBSTRATE-BINDING PROTEIN, COMPATIBLE SOLUES, ABC-TRANSPORTER, KEYWDS 2 OSMOPROTECTION, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.HANEKOP,M.HOEING,L.SOHN-BOSSER,M.JEBBAR,L.SCHMITT,E.BREMER REVDAT 4 18-OCT-17 2Q88 1 REMARK REVDAT 3 13-JUL-11 2Q88 1 VERSN REVDAT 2 24-FEB-09 2Q88 1 VERSN REVDAT 1 01-JAN-08 2Q88 0 JRNL AUTH N.HANEKOP,M.HOING,L.SOHN-BOSSER,M.JEBBAR,L.SCHMITT,E.BREMER JRNL TITL CRYSTAL STRUCTURE OF THE LIGAND-BINDING PROTEIN EHUB FROM JRNL TITL 2 SINORHIZOBIUM MELILOTI REVEALS SUBSTRATE RECOGNITION OF THE JRNL TITL 3 COMPATIBLE SOLUTES ECTOINE AND HYDROXYECTOINE. JRNL REF J.MOL.BIOL. V. 374 1237 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17996893 JRNL DOI 10.1016/J.JMB.2007.09.071 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 21600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1113 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1515 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1906 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.38000 REMARK 3 B22 (A**2) : 1.38000 REMARK 3 B33 (A**2) : -2.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.111 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.779 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1949 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2635 ; 1.225 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 256 ; 5.491 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;35.132 ;24.937 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 330 ;16.313 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;13.228 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 293 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1483 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 894 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1345 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 128 ; 0.108 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.439 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.215 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1319 ; 0.601 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2040 ; 1.012 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 698 ; 1.658 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 595 ; 2.825 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 98 REMARK 3 RESIDUE RANGE : A 200 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6429 32.9292 63.4840 REMARK 3 T TENSOR REMARK 3 T11: 0.0034 T22: -0.0866 REMARK 3 T33: -0.0039 T12: -0.0114 REMARK 3 T13: 0.0097 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.7525 L22: 0.4033 REMARK 3 L33: 1.4589 L12: -0.3739 REMARK 3 L13: -0.0110 L23: -0.0347 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: -0.0219 S13: -0.0266 REMARK 3 S21: -0.0883 S22: -0.0029 S23: 0.0131 REMARK 3 S31: -0.0404 S32: 0.0891 S33: -0.0312 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2470 43.3647 81.7866 REMARK 3 T TENSOR REMARK 3 T11: -0.0372 T22: -0.0559 REMARK 3 T33: -0.0178 T12: 0.0143 REMARK 3 T13: 0.0090 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.1332 L22: 1.1873 REMARK 3 L33: 2.3367 L12: -0.3767 REMARK 3 L13: -0.5967 L23: 1.2340 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: -0.0903 S13: -0.0467 REMARK 3 S21: -0.0345 S22: 0.0136 S23: 0.0198 REMARK 3 S31: -0.0257 S32: -0.0499 S33: -0.0855 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Q88 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21659 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, PEG, CDCL2, PH 4.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.94150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.68250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.68250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 121.41225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.68250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.68250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.47075 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.68250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.68250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 121.41225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.68250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.68250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.47075 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.94150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD CD A 601 O HOH A 719 1.54 REMARK 500 CD CD A 603 O HOH A 609 1.62 REMARK 500 CD CD A 602 O HOH A 726 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 1 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 30 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 73 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 68.52 66.06 REMARK 500 SER A 34 -152.34 -141.99 REMARK 500 ILE A 95 -65.56 -128.74 REMARK 500 ASP A 210 31.67 -97.16 REMARK 500 ALA A 255 93.32 -65.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 604 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 56 OG REMARK 620 2 HIS A 72 NE2 81.9 REMARK 620 3 HOH A 605 O 83.4 113.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 603 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 211 OE1 REMARK 620 2 ASP A 215 OD2 97.6 REMARK 620 3 HOH A 679 O 90.5 102.2 REMARK 620 4 HOH A 725 O 78.8 156.3 101.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 601 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 250 OE2 REMARK 620 2 HOH A 630 O 89.1 REMARK 620 3 HOH A 648 O 83.8 124.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 602 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 673 O REMARK 620 2 HOH A 669 O 70.0 REMARK 620 3 HOH A 608 O 105.8 171.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4CS A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q89 RELATED DB: PDB DBREF 2Q88 A 1 256 UNP Q92WC8 Q92WC8_RHIME 28 283 SEQADV 2Q88 ARG A 0 UNP Q92WC8 EXPRESSION TAG SEQRES 1 A 257 ARG ASP GLU ASN LYS LEU GLU GLU LEU LYS GLU GLN GLY SEQRES 2 A 257 PHE ALA ARG ILE ALA ILE ALA ASN GLU PRO PRO PHE THR SEQRES 3 A 257 ALA VAL GLY ALA ASP GLY LYS VAL SER GLY ALA ALA PRO SEQRES 4 A 257 ASP VAL ALA ARG GLU ILE PHE LYS ARG LEU GLY VAL ALA SEQRES 5 A 257 ASP VAL VAL ALA SER ILE SER GLU TYR GLY ALA MET ILE SEQRES 6 A 257 PRO GLY LEU GLN ALA GLY ARG HIS ASP ALA ILE THR ALA SEQRES 7 A 257 GLY LEU PHE MET LYS PRO GLU ARG CYS ALA ALA VAL ALA SEQRES 8 A 257 TYR SER GLN PRO ILE LEU CYS ASP ALA GLU ALA PHE ALA SEQRES 9 A 257 LEU LYS LYS GLY ASN PRO LEU GLY LEU LYS SER TYR LYS SEQRES 10 A 257 ASP ILE ALA ASP ASN PRO ASP ALA LYS ILE GLY ALA PRO SEQRES 11 A 257 GLY GLY GLY THR GLU GLU LYS LEU ALA LEU GLU ALA GLY SEQRES 12 A 257 VAL PRO ARG ASP ARG VAL ILE VAL VAL PRO ASP GLY GLN SEQRES 13 A 257 SER GLY LEU LYS MET LEU GLN ASP GLY ARG ILE ASP VAL SEQRES 14 A 257 TYR SER LEU PRO VAL LEU SER ILE ASN ASP LEU VAL SER SEQRES 15 A 257 LYS ALA ASN ASP PRO ASN VAL GLU VAL LEU ALA PRO VAL SEQRES 16 A 257 GLU GLY ALA PRO VAL TYR CYS ASP GLY ALA ALA PHE ARG SEQRES 17 A 257 LYS GLY ASP GLU ALA LEU ARG ASP ALA PHE ASP VAL GLU SEQRES 18 A 257 LEU ALA LYS LEU LYS GLU SER GLY GLU PHE ALA LYS ILE SEQRES 19 A 257 ILE GLU PRO TYR GLY PHE SER ALA LYS ALA ALA MET SER SEQRES 20 A 257 THR THR ARG GLU LYS LEU CYS ALA ALA LYS HET CD A 601 1 HET CD A 602 1 HET CD A 603 1 HET CD A 604 1 HET 4CS A 501 10 HETNAM CD CADMIUM ION HETNAM 4CS (4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC HETNAM 2 4CS ACID HETSYN 4CS ECTOINE FORMUL 2 CD 4(CD 2+) FORMUL 6 4CS C6 H10 N2 O2 FORMUL 7 HOH *123(H2 O) HELIX 1 1 ASN A 3 GLY A 12 1 10 HELIX 2 2 GLY A 35 LEU A 48 1 14 HELIX 3 3 GLU A 59 GLY A 61 5 3 HELIX 4 4 ALA A 62 ALA A 69 1 8 HELIX 5 5 LYS A 82 ALA A 87 1 6 HELIX 6 6 SER A 114 ASN A 121 1 8 HELIX 7 7 GLY A 132 ALA A 141 1 10 HELIX 8 8 PRO A 144 ASP A 146 5 3 HELIX 9 9 ASP A 153 ASP A 163 1 11 HELIX 10 10 VAL A 173 ASN A 184 1 12 HELIX 11 11 ARG A 207 GLY A 209 5 3 HELIX 12 12 ASP A 210 GLY A 228 1 19 HELIX 13 13 GLY A 228 GLU A 235 1 8 HELIX 14 14 PRO A 236 GLY A 238 5 3 HELIX 15 15 SER A 240 SER A 246 1 7 HELIX 16 16 THR A 248 ALA A 254 1 7 SHEET 1 A 3 ASP A 52 ILE A 57 0 SHEET 2 A 3 PHE A 13 ILE A 18 1 N ALA A 14 O VAL A 54 SHEET 3 A 3 ALA A 74 ILE A 75 1 O ALA A 74 N ALA A 17 SHEET 1 B 2 ALA A 26 VAL A 27 0 SHEET 2 B 2 VAL A 33 SER A 34 -1 O SER A 34 N ALA A 26 SHEET 1 C 2 ALA A 90 TYR A 91 0 SHEET 2 C 2 ALA A 205 PHE A 206 -1 O PHE A 206 N ALA A 90 SHEET 1 D 2 CYS A 97 ASP A 98 0 SHEET 2 D 2 TYR A 200 CYS A 201 -1 O TYR A 200 N ASP A 98 SHEET 1 E 5 VAL A 148 VAL A 150 0 SHEET 2 E 5 ILE A 126 ALA A 128 1 N ILE A 126 O ILE A 149 SHEET 3 E 5 VAL A 168 PRO A 172 1 O VAL A 168 N GLY A 127 SHEET 4 E 5 GLU A 100 LYS A 105 -1 N ALA A 101 O LEU A 171 SHEET 5 E 5 VAL A 188 LEU A 191 -1 O GLU A 189 N LEU A 104 SSBOND 1 CYS A 86 CYS A 253 1555 1555 2.02 SSBOND 2 CYS A 97 CYS A 201 1555 1555 2.05 LINK OG SER A 56 CD CD A 604 1555 1555 2.55 LINK NE2 HIS A 72 CD CD A 604 1555 1555 2.53 LINK OE1 GLU A 211 CD CD A 603 1555 1555 2.32 LINK OD2 ASP A 215 CD CD A 603 1555 1555 2.17 LINK OE2 GLU A 250 CD CD A 601 1555 1555 2.56 LINK CD CD A 601 O HOH A 630 1555 1555 2.49 LINK CD CD A 601 O HOH A 648 1555 1555 2.26 LINK CD CD A 602 O HOH A 673 1555 1555 2.08 LINK CD CD A 602 O HOH A 669 1555 1555 2.42 LINK CD CD A 602 O HOH A 608 1555 1555 2.50 LINK CD CD A 603 O HOH A 679 1555 1555 2.39 LINK CD CD A 603 O HOH A 725 1555 1555 2.50 LINK CD CD A 604 O HOH A 605 1555 1555 2.35 CISPEP 1 PRO A 22 PRO A 23 0 0.42 CISPEP 2 ALA A 192 PRO A 193 0 -6.45 SITE 1 AC1 5 ASP A 146 GLU A 250 HOH A 630 HOH A 648 SITE 2 AC1 5 HOH A 719 SITE 1 AC2 5 ASP A 117 HOH A 608 HOH A 669 HOH A 673 SITE 2 AC2 5 HOH A 726 SITE 1 AC3 6 ASP A 167 GLU A 211 ASP A 215 HOH A 609 SITE 2 AC3 6 HOH A 679 HOH A 725 SITE 1 AC4 5 SER A 56 GLU A 59 HIS A 72 HOH A 605 SITE 2 AC4 5 HOH A 653 SITE 1 AC5 11 GLU A 21 PHE A 24 TYR A 60 GLY A 78 SITE 2 AC5 11 LEU A 79 PHE A 80 ARG A 85 GLY A 132 SITE 3 AC5 11 THR A 133 GLU A 134 PRO A 172 CRYST1 57.365 57.365 161.883 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017432 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017432 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006177 0.00000