HEADER METAL TRANSPORT 11-JUN-07 2Q8Q TITLE CRYSTAL STRUCTURE OF S. AUREUS ISDE COMPLEXED WITH HEME COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-REGULATED SURFACE DETERMINANT E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: ISDA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HELICAL BACKBONE METAL RECEPTOR SUPERFAMILY, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.C.GRIGG,M.E.MURPHY REVDAT 6 30-AUG-23 2Q8Q 1 REMARK SEQADV REVDAT 5 18-OCT-17 2Q8Q 1 REMARK REVDAT 4 13-JUL-11 2Q8Q 1 VERSN REVDAT 3 24-FEB-09 2Q8Q 1 VERSN REVDAT 2 09-OCT-07 2Q8Q 1 JRNL REVDAT 1 31-JUL-07 2Q8Q 0 JRNL AUTH J.C.GRIGG,C.L.VERMEIREN,D.E.HEINRICHS,M.E.MURPHY JRNL TITL HEME COORDINATION BY STAPHYLOCOCCUS AUREUS ISDE. JRNL REF J.BIOL.CHEM. V. 282 28815 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17666394 JRNL DOI 10.1074/JBC.M704602200 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 16264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 869 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1182 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2076 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.45000 REMARK 3 B22 (A**2) : 1.45000 REMARK 3 B33 (A**2) : -2.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.261 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.212 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.222 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2169 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2939 ; 1.304 ; 2.041 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 257 ; 5.715 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;35.595 ;25.914 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 414 ;16.652 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;21.539 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 317 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1601 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 987 ; 0.186 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1471 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 188 ; 0.157 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.112 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.159 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1335 ; 0.562 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2104 ; 0.888 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 952 ; 1.546 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 833 ; 2.315 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 69.1016 50.4619 60.3705 REMARK 3 T TENSOR REMARK 3 T11: 0.1051 T22: 0.0537 REMARK 3 T33: 0.0371 T12: -0.0120 REMARK 3 T13: -0.0683 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.4541 L22: 3.0939 REMARK 3 L33: 5.9627 L12: 0.2421 REMARK 3 L13: 0.4299 L23: 0.3459 REMARK 3 S TENSOR REMARK 3 S11: -0.3005 S12: 0.0770 S13: 0.1405 REMARK 3 S21: 0.1236 S22: 0.0935 S23: -0.2758 REMARK 3 S31: -0.4398 S32: 0.4382 S33: 0.2069 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): 73.3680 44.0323 48.6007 REMARK 3 T TENSOR REMARK 3 T11: 0.0767 T22: 0.1993 REMARK 3 T33: 0.0061 T12: -0.0033 REMARK 3 T13: 0.0892 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.0289 L22: 4.3891 REMARK 3 L33: 4.2957 L12: 1.2127 REMARK 3 L13: 1.6594 L23: 0.7985 REMARK 3 S TENSOR REMARK 3 S11: -0.1804 S12: 0.4226 S13: -0.0952 REMARK 3 S21: -0.5646 S22: 0.1723 S23: -0.4697 REMARK 3 S31: -0.0425 S32: 0.8365 S33: 0.0081 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 116 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 54.0517 34.9599 60.0654 REMARK 3 T TENSOR REMARK 3 T11: 0.1333 T22: 0.0109 REMARK 3 T33: 0.0306 T12: 0.0330 REMARK 3 T13: 0.0161 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 1.1236 L22: 0.8703 REMARK 3 L33: 1.3689 L12: 0.2913 REMARK 3 L13: 0.2632 L23: 0.2331 REMARK 3 S TENSOR REMARK 3 S11: -0.0737 S12: -0.0045 S13: -0.2488 REMARK 3 S21: 0.1311 S22: 0.0415 S23: 0.0287 REMARK 3 S31: 0.1253 S32: -0.0131 S33: 0.0322 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): 42.7143 31.0382 40.3205 REMARK 3 T TENSOR REMARK 3 T11: 0.5937 T22: 0.4231 REMARK 3 T33: 0.4247 T12: -0.2794 REMARK 3 T13: -0.1701 T23: -0.1294 REMARK 3 L TENSOR REMARK 3 L11: 49.4913 L22: 11.8007 REMARK 3 L33: 1.1814 L12: 20.7974 REMARK 3 L13: 4.5206 L23: 3.4334 REMARK 3 S TENSOR REMARK 3 S11: 1.0254 S12: 2.2705 S13: -0.6450 REMARK 3 S21: -0.4148 S22: 0.1652 S23: 1.4428 REMARK 3 S31: 0.2661 S32: -0.3748 S33: -1.1906 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 219 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 44.0573 45.1522 47.3063 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.0011 REMARK 3 T33: 0.0367 T12: 0.0596 REMARK 3 T13: -0.0600 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 4.6902 L22: 4.7199 REMARK 3 L33: 3.7544 L12: 2.4143 REMARK 3 L13: -1.0519 L23: -0.6110 REMARK 3 S TENSOR REMARK 3 S11: -0.1177 S12: 0.1314 S13: 0.4687 REMARK 3 S21: -0.1557 S22: 0.0045 S23: 0.2991 REMARK 3 S31: -0.5450 S32: -0.2244 S33: 0.1132 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 41.3582 42.6121 53.5834 REMARK 3 T TENSOR REMARK 3 T11: 0.0966 T22: -0.0443 REMARK 3 T33: 0.0452 T12: 0.0525 REMARK 3 T13: -0.0027 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 3.5702 L22: 2.1759 REMARK 3 L33: 3.6738 L12: 0.2880 REMARK 3 L13: 0.1421 L23: -0.1244 REMARK 3 S TENSOR REMARK 3 S11: -0.0913 S12: 0.1208 S13: 0.1631 REMARK 3 S21: 0.0453 S22: -0.0163 S23: 0.3296 REMARK 3 S31: -0.2402 S32: -0.3257 S33: 0.1076 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Q8Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000043290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17270 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.36300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2Q8P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES, 0.2M AMMONIUM ACETATE, 28% REMARK 280 PEG 4000, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.49650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.10950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.10950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 108.74475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.10950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.10950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.24825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.10950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.10950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 108.74475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.10950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.10950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.24825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.49650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 30 REMARK 465 SER A 31 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 214 CG GLU A 214 CD 0.094 REMARK 500 GLU A 214 CD GLU A 214 OE2 0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 214 OE1 - CD - OE2 ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 138 36.92 -141.08 REMARK 500 LEU A 216 6.86 -60.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 300 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 78 SD REMARK 620 2 HEM A 300 NA 86.4 REMARK 620 3 HEM A 300 NB 86.3 87.6 REMARK 620 4 HEM A 300 NC 88.7 174.0 88.8 REMARK 620 5 HEM A 300 ND 92.0 92.7 178.2 90.8 REMARK 620 6 HIS A 229 NE2 177.9 93.3 91.6 91.5 90.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q8P RELATED DB: PDB DBREF 2Q8Q A 32 289 UNP Q7A652 Q7A652_STAAN 32 289 SEQADV 2Q8Q GLY A 30 UNP Q7A652 EXPRESSION TAG SEQADV 2Q8Q SER A 31 UNP Q7A652 EXPRESSION TAG SEQRES 1 A 260 GLY SER GLY GLU PHE ARG ILE VAL PRO THR THR VAL ALA SEQRES 2 A 260 LEU THR MET THR LEU ASP LYS LEU ASP LEU PRO ILE VAL SEQRES 3 A 260 GLY LYS PRO THR SER TYR LYS THR LEU PRO ASN ARG TYR SEQRES 4 A 260 LYS ASP VAL PRO GLU ILE GLY GLN PRO MET GLU PRO ASN SEQRES 5 A 260 VAL GLU ALA VAL LYS LYS LEU LYS PRO THR HIS VAL LEU SEQRES 6 A 260 SER VAL SER THR ILE LYS ASP GLU MET GLN PRO PHE TYR SEQRES 7 A 260 LYS GLN LEU ASN MET LYS GLY TYR PHE TYR ASP PHE ASP SEQRES 8 A 260 SER LEU LYS GLY MET GLN LYS SER ILE THR GLN LEU GLY SEQRES 9 A 260 ASP GLN PHE ASN ARG LYS ALA GLN ALA LYS GLU LEU ASN SEQRES 10 A 260 ASP HIS LEU ASN SER VAL LYS GLN LYS ILE GLU ASN LYS SEQRES 11 A 260 ALA ALA LYS GLN LYS LYS HIS PRO LYS VAL LEU ILE LEU SEQRES 12 A 260 MET GLY VAL PRO GLY SER TYR LEU VAL ALA THR ASP LYS SEQRES 13 A 260 SER TYR ILE GLY ASP LEU VAL LYS ILE ALA GLY GLY GLU SEQRES 14 A 260 ASN VAL ILE LYS VAL LYS ASP ARG GLN TYR ILE SER SER SEQRES 15 A 260 ASN THR GLU ASN LEU LEU ASN ILE ASN PRO ASP ILE ILE SEQRES 16 A 260 LEU ARG LEU PRO HIS GLY MET PRO GLU GLU VAL LYS LYS SEQRES 17 A 260 MET PHE GLN LYS GLU PHE LYS GLN ASN ASP ILE TRP LYS SEQRES 18 A 260 HIS PHE LYS ALA VAL LYS ASN ASN HIS VAL TYR ASP LEU SEQRES 19 A 260 GLU GLU VAL PRO PHE GLY ILE THR ALA ASN VAL ASP ALA SEQRES 20 A 260 ASP LYS ALA MET THR GLN LEU TYR ASP LEU PHE TYR LYS HET HEM A 300 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 HOH *246(H2 O) HELIX 1 1 THR A 40 LEU A 50 1 11 HELIX 2 2 PRO A 65 LYS A 69 5 5 HELIX 3 3 ASN A 81 LEU A 88 1 8 HELIX 4 4 ILE A 99 ASN A 111 1 13 HELIX 5 5 SER A 121 PHE A 136 1 16 HELIX 6 6 ARG A 138 GLN A 163 1 26 HELIX 7 7 SER A 186 ALA A 195 1 10 HELIX 8 8 MET A 231 ASN A 246 1 16 HELIX 9 9 ILE A 248 HIS A 251 5 4 HELIX 10 10 PHE A 252 ASN A 257 1 6 HELIX 11 11 ASP A 275 TYR A 288 1 14 SHEET 1 A 3 ILE A 36 PRO A 38 0 SHEET 2 A 3 HIS A 92 VAL A 96 1 O LEU A 94 N VAL A 37 SHEET 3 A 3 TYR A 115 TYR A 117 1 O TYR A 115 N SER A 95 SHEET 1 B 4 GLU A 198 ASN A 199 0 SHEET 2 B 4 LYS A 168 VAL A 175 1 N VAL A 169 O GLU A 198 SHEET 3 B 4 SER A 178 ALA A 182 -1 O LEU A 180 N MET A 173 SHEET 4 B 4 TYR A 208 SER A 210 -1 O ILE A 209 N VAL A 181 SHEET 1 C 4 GLU A 198 ASN A 199 0 SHEET 2 C 4 LYS A 168 VAL A 175 1 N VAL A 169 O GLU A 198 SHEET 3 C 4 ILE A 223 PRO A 228 1 O LEU A 227 N GLY A 174 SHEET 4 C 4 VAL A 260 ASP A 262 1 O TYR A 261 N ARG A 226 LINK SD MET A 78 FE HEM A 300 1555 1555 2.28 LINK NE2 HIS A 229 FE HEM A 300 1555 1555 2.01 CISPEP 1 VAL A 266 PRO A 267 0 10.82 SITE 1 AC1 20 THR A 40 VAL A 41 ALA A 42 SER A 60 SITE 2 AC1 20 TYR A 61 LYS A 62 GLN A 76 PRO A 77 SITE 3 AC1 20 MET A 78 ILE A 99 ASN A 137 PRO A 176 SITE 4 AC1 20 HIS A 229 GLY A 230 ILE A 270 THR A 271 SITE 5 AC1 20 HOH A 307 HOH A 313 HOH A 316 HOH A 369 CRYST1 64.219 64.219 144.993 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015572 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015572 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006897 0.00000