data_2QEC # _entry.id 2QEC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QEC pdb_00002qec 10.2210/pdb2qec/pdb RCSB RCSB043491 ? ? WWPDB D_1000043491 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 373193 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2QEC _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-06-25 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of histone acetyltransferase HPA2 and related acetyltransferase (NP_600742.1) from Corynebacterium glutamicum ATCC 13032 at 1.90 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2QEC _cell.length_a 79.070 _cell.length_b 79.070 _cell.length_c 181.260 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QEC _symmetry.Int_Tables_number 179 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone acetyltransferase HPA2 and related acetyltransferases' 22255.531 1 ? A29T ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 9 ? ? ? ? 3 water nat water 18.015 151 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GCN5-related N-acetyltransferase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SPTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGV ALWDRPDGNHSAKDQAA(MSE)LPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIA RAGDEAIYLEATSTRAAQLYNRLGFVPLGYIPSDDDGTPELA(MSE)WKPPA(MSE)PTV ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSPTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWD RPDGNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDEAIY LEATSTRAAQLYNRLGFVPLGYIPSDDDGTPELAMWKPPAMPTV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 373193 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 PRO n 1 5 THR n 1 6 VAL n 1 7 LEU n 1 8 PRO n 1 9 ALA n 1 10 THR n 1 11 GLN n 1 12 ALA n 1 13 ASP n 1 14 PHE n 1 15 PRO n 1 16 LYS n 1 17 ILE n 1 18 VAL n 1 19 ASP n 1 20 VAL n 1 21 LEU n 1 22 VAL n 1 23 GLU n 1 24 ALA n 1 25 PHE n 1 26 ALA n 1 27 ASN n 1 28 ASP n 1 29 PRO n 1 30 THR n 1 31 PHE n 1 32 LEU n 1 33 ARG n 1 34 TRP n 1 35 ILE n 1 36 PRO n 1 37 GLN n 1 38 PRO n 1 39 ASP n 1 40 PRO n 1 41 GLY n 1 42 SER n 1 43 ALA n 1 44 LYS n 1 45 LEU n 1 46 ARG n 1 47 ALA n 1 48 LEU n 1 49 PHE n 1 50 GLU n 1 51 LEU n 1 52 GLN n 1 53 ILE n 1 54 GLU n 1 55 LYS n 1 56 GLN n 1 57 TYR n 1 58 ALA n 1 59 VAL n 1 60 ALA n 1 61 GLY n 1 62 ASN n 1 63 ILE n 1 64 ASP n 1 65 VAL n 1 66 ALA n 1 67 ARG n 1 68 ASP n 1 69 SER n 1 70 GLU n 1 71 GLY n 1 72 GLU n 1 73 ILE n 1 74 VAL n 1 75 GLY n 1 76 VAL n 1 77 ALA n 1 78 LEU n 1 79 TRP n 1 80 ASP n 1 81 ARG n 1 82 PRO n 1 83 ASP n 1 84 GLY n 1 85 ASN n 1 86 HIS n 1 87 SER n 1 88 ALA n 1 89 LYS n 1 90 ASP n 1 91 GLN n 1 92 ALA n 1 93 ALA n 1 94 MSE n 1 95 LEU n 1 96 PRO n 1 97 ARG n 1 98 LEU n 1 99 VAL n 1 100 SER n 1 101 ILE n 1 102 PHE n 1 103 GLY n 1 104 ILE n 1 105 LYS n 1 106 ALA n 1 107 ALA n 1 108 GLN n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 THR n 1 113 ASP n 1 114 LEU n 1 115 SER n 1 116 SER n 1 117 ALA n 1 118 ARG n 1 119 PHE n 1 120 HIS n 1 121 PRO n 1 122 LYS n 1 123 PHE n 1 124 PRO n 1 125 HIS n 1 126 TRP n 1 127 TYR n 1 128 LEU n 1 129 TYR n 1 130 THR n 1 131 VAL n 1 132 ALA n 1 133 THR n 1 134 SER n 1 135 SER n 1 136 SER n 1 137 ALA n 1 138 ARG n 1 139 GLY n 1 140 THR n 1 141 GLY n 1 142 VAL n 1 143 GLY n 1 144 SER n 1 145 ALA n 1 146 LEU n 1 147 LEU n 1 148 ASN n 1 149 HIS n 1 150 GLY n 1 151 ILE n 1 152 ALA n 1 153 ARG n 1 154 ALA n 1 155 GLY n 1 156 ASP n 1 157 GLU n 1 158 ALA n 1 159 ILE n 1 160 TYR n 1 161 LEU n 1 162 GLU n 1 163 ALA n 1 164 THR n 1 165 SER n 1 166 THR n 1 167 ARG n 1 168 ALA n 1 169 ALA n 1 170 GLN n 1 171 LEU n 1 172 TYR n 1 173 ASN n 1 174 ARG n 1 175 LEU n 1 176 GLY n 1 177 PHE n 1 178 VAL n 1 179 PRO n 1 180 LEU n 1 181 GLY n 1 182 TYR n 1 183 ILE n 1 184 PRO n 1 185 SER n 1 186 ASP n 1 187 ASP n 1 188 ASP n 1 189 GLY n 1 190 THR n 1 191 PRO n 1 192 GLU n 1 193 LEU n 1 194 ALA n 1 195 MSE n 1 196 TRP n 1 197 LYS n 1 198 PRO n 1 199 PRO n 1 200 ALA n 1 201 MSE n 1 202 PRO n 1 203 THR n 1 204 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Corynebacterium _entity_src_gen.pdbx_gene_src_gene 'NP_600742.1, Cgl1527, cg1722' _entity_src_gen.gene_src_species 'Corynebacterium glutamicum' _entity_src_gen.gene_src_strain 'DSM 20300, JCM 1318, LMG 3730, NCIMB 10025' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Corynebacterium glutamicum ATCC 13032' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 196627 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8NQB1_CORGL _struct_ref.pdbx_db_accession Q8NQB1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSPTVLPATQADFPKIVDVLVEAFANDPAFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWDR PDGNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDEAIYL EATSTRAAQLYNRLGFVPLGYIPSDDDGTPELAMWKPPAMPTV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QEC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 204 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8NQB1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 203 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 203 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QEC GLY A 1 ? UNP Q8NQB1 ? ? 'expression tag' 0 1 1 2QEC MSE A 2 ? UNP Q8NQB1 MET 1 'modified residue' 1 2 1 2QEC THR A 30 ? UNP Q8NQB1 ALA 29 'engineered mutation' 29 3 1 2QEC MSE A 94 ? UNP Q8NQB1 MET 93 'modified residue' 93 4 1 2QEC MSE A 195 ? UNP Q8NQB1 MET 194 'modified residue' 194 5 1 2QEC MSE A 201 ? UNP Q8NQB1 MET 200 'modified residue' 200 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 2 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2QEC # loop_ _exptl_crystal.id _exptl_crystal.density_Matthews _exptl_crystal.density_meas _exptl_crystal.density_percent_sol _exptl_crystal.description _exptl_crystal.F_000 _exptl_crystal.preparation 1 3.67 ? 66.50 ;DATA FROM A SE-MET CONTAINING CRYSTAL IN SPACEGROUP P6(2)22 WAS USED FOR THE MAD PHASING EXPERIMENTS AT 2.30 ANGSTROM RESOLUTION. THIS MAD STRUCTURE WAS USED AS A MOLECULAR REPLACEMENT MODEL TO PHASE THIS STRUCTURE AT 1.90 ANGSTROM RESOLUTION IN THE P6(5)22 SPACEGROUP. ; ? ? 2 ? ? ? ? ? ? # loop_ _exptl_crystal_grow.crystal_id _exptl_crystal_grow.method _exptl_crystal_grow.pH _exptl_crystal_grow.temp _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp_details _exptl_crystal_grow.pdbx_pH_range 1 'VAPOR DIFFUSION, SITTING DROP' 4.6 277 'NANODROP, 8.0% PEG 4000, 0.1M Acetate pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 277K' ? . 2 'VAPOR DIFFUSION, SITTING DROP' 8.5 277 'NANODROP, 0.2M Li2SO4, 40.0% PEG 400, 0.1M Tris-HCl pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' ? . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 2 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.details _diffrn_detector.pdbx_collection_date 1 CCD 'MARMOSAIC 325 mm CCD' 'Flat mirror (vertical focusing)' 2007-01-18 2 CCD 'MARMOSAIC 325 mm CCD' 'Flat mirror (vertical focusing)' 2007-01-07 # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_scattering_type 1 M 'Single crystal Si(111) bent (horizontal focusing)' 'SINGLE WAVELENGTH' 1 x-ray 2 M 'Single crystal Si(111) bent (horizontal focusing)' MAD 1 x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97917 1.0 3 0.91837 1.0 4 0.97886 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site 1 SYNCHROTRON BL11-1 'SSRL BEAMLINE BL11-1' 0.91162 ? SSRL 2 SYNCHROTRON BL11-1 'SSRL BEAMLINE BL11-1' '0.97917, 0.91837, 0.97886' ? SSRL # _reflns.entry_id 2QEC _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 27.640 _reflns.number_obs 27197 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_netI_over_sigmaI 17.36 _reflns.percent_possible_obs 99.5 _reflns.B_iso_Wilson_estimate 32.59 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 17.62 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.90 1.97 29060 ? ? 0.905 2.0 ? ? ? ? ? 99.3 1 1,2 1.97 2.05 29134 ? ? 0.624 2.8 ? ? ? ? ? 99.0 2 1,2 2.05 2.14 27573 ? ? 0.422 4.0 ? ? ? ? ? 99.3 3 1,2 2.14 2.25 47227 ? ? 0.411 5.9 ? ? ? ? ? 99.5 4 1,2 2.25 2.39 57039 ? ? 0.333 8.3 ? ? ? ? ? 99.4 5 1,2 2.39 2.58 59495 ? ? 0.226 11.7 ? ? ? ? ? 99.6 6 1,2 2.58 2.84 57836 ? ? 0.144 17.3 ? ? ? ? ? 99.8 7 1,2 2.84 3.25 57913 ? ? 0.086 27.1 ? ? ? ? ? 99.8 8 1,2 3.25 4.08 56376 ? ? 0.051 42.0 ? ? ? ? ? 99.9 9 1,2 4.08 27.64 57459 ? ? 0.036 51.7 ? ? ? ? ? 99.5 10 1,2 # _refine.entry_id 2QEC _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 27.640 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.480 _refine.ls_number_reflns_obs 27120 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 4. ETHYLENE GLYCOL WAS MODELED BASED ON CRYO CONDITIONS. 5. RESIDUES 83-94, 103, 107-115 ARE DISORDERED AND WERE NOT MODELED. 6. ASP 186 IS A RAMACHANDRAN OUTLIER AND IS LOCATED IN POOR DENSITY. ; _refine.ls_R_factor_all 0.195 _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.242 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1363 _refine.B_iso_mean 41.353 _refine.aniso_B[1][1] 1.770 _refine.aniso_B[2][2] 1.770 _refine.aniso_B[3][3] -2.660 _refine.aniso_B[1][2] 0.890 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.pdbx_overall_ESU_R 0.106 _refine.pdbx_overall_ESU_R_Free 0.116 _refine.overall_SU_ML 0.096 _refine.overall_SU_B 6.388 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MAD, MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.195 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1375 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 1562 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 27.640 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1457 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1357 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1977 1.609 1.975 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3139 1.095 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 183 6.529 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 37.366 23.158 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 206 12.391 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 15.970 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 220 0.149 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1595 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 290 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 286 0.225 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1311 0.187 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 691 0.181 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 834 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 105 0.205 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 6 0.037 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 73 0.195 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 13 0.200 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 942 2.370 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 363 0.603 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1471 3.613 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 601 5.400 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 503 7.142 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.130 _refine_ls_shell.number_reflns_R_work 1843 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.285 _refine_ls_shell.R_factor_R_free 0.377 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 87 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1930 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2QEC _struct.title ;Crystal structure of histone acetyltransferase HPA2 and related acetyltransferase (NP_600742.1) from Corynebacterium glutamicum ATCC 13032 at 1.90 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NP_600742.1, histone acetyltransferase HPA2 and related acetyltransferase, Acetyltransferase (GNAT) family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, TRANSFERASE ; _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.entry_id 2QEC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 3 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 10 ? ALA A 12 ? THR A 9 ALA A 11 5 ? 3 HELX_P HELX_P2 2 ASP A 13 ? ALA A 26 ? ASP A 12 ALA A 25 1 ? 14 HELX_P HELX_P3 3 ASP A 28 ? ARG A 33 ? ASP A 27 ARG A 32 1 ? 6 HELX_P HELX_P4 4 ASP A 39 ? GLY A 41 ? ASP A 38 GLY A 40 5 ? 3 HELX_P HELX_P5 5 SER A 42 ? GLN A 56 ? SER A 41 GLN A 55 1 ? 15 HELX_P HELX_P6 6 GLN A 56 ? ALA A 60 ? GLN A 55 ALA A 59 1 ? 5 HELX_P HELX_P7 7 ARG A 97 ? GLY A 103 ? ARG A 96 GLY A 102 1 ? 7 HELX_P HELX_P8 8 SER A 135 ? ARG A 138 ? SER A 134 ARG A 137 5 ? 4 HELX_P HELX_P9 9 GLY A 141 ? GLY A 155 ? GLY A 140 GLY A 154 1 ? 15 HELX_P HELX_P10 10 SER A 165 ? LEU A 175 ? SER A 164 LEU A 174 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A SER 3 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A ALA 194 C ? ? ? 1_555 A MSE 195 N ? ? A ALA 193 A MSE 194 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A MSE 195 C ? ? ? 1_555 A TRP 196 N ? ? A MSE 194 A TRP 195 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale4 covale both ? A ALA 200 C ? ? ? 1_555 A MSE 201 N ? ? A ALA 199 A MSE 200 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A MSE 201 C ? ? ? 1_555 A PRO 202 N ? ? A MSE 200 A PRO 201 1_555 ? ? ? ? ? ? ? 1.351 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 37 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 38 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.52 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 5 ? PRO A 8 ? THR A 4 PRO A 7 A 2 GLY A 61 ? ARG A 67 ? GLY A 60 ARG A 66 A 3 ILE A 73 ? ASP A 80 ? ILE A 72 ASP A 79 A 4 TRP A 126 ? THR A 133 ? TRP A 125 THR A 132 A 5 ILE A 159 ? ALA A 163 ? ILE A 158 ALA A 162 A 6 GLU A 192 ? LYS A 197 ? GLU A 191 LYS A 196 A 7 VAL A 178 ? ILE A 183 ? VAL A 177 ILE A 182 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 7 ? N LEU A 6 O VAL A 65 ? O VAL A 64 A 2 3 N ALA A 66 ? N ALA A 65 O VAL A 74 ? O VAL A 73 A 3 4 N VAL A 76 ? N VAL A 75 O ALA A 132 ? O ALA A 131 A 4 5 N TRP A 126 ? N TRP A 125 O TYR A 160 ? O TYR A 159 A 5 6 N ALA A 163 ? N ALA A 162 O LEU A 193 ? O LEU A 192 A 6 7 O TRP A 196 ? O TRP A 195 N VAL A 178 ? N VAL A 177 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 204 ? 7 'BINDING SITE FOR RESIDUE EDO A 204' AC2 Software A EDO 205 ? 3 'BINDING SITE FOR RESIDUE EDO A 205' AC3 Software A EDO 206 ? 6 'BINDING SITE FOR RESIDUE EDO A 206' AC4 Software A EDO 207 ? 7 'BINDING SITE FOR RESIDUE EDO A 207' AC5 Software A EDO 208 ? 8 'BINDING SITE FOR RESIDUE EDO A 208' AC6 Software A EDO 209 ? 4 'BINDING SITE FOR RESIDUE EDO A 209' AC7 Software A EDO 210 ? 8 'BINDING SITE FOR RESIDUE EDO A 210' AC8 Software A EDO 211 ? 6 'BINDING SITE FOR RESIDUE EDO A 211' AC9 Software A EDO 212 ? 8 'BINDING SITE FOR RESIDUE EDO A 212' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 156 ? ASP A 155 . ? 1_555 ? 2 AC1 7 GLU A 157 ? GLU A 156 . ? 1_555 ? 3 AC1 7 ASP A 187 ? ASP A 186 . ? 5_555 ? 4 AC1 7 ASP A 188 ? ASP A 187 . ? 5_555 ? 5 AC1 7 GLY A 189 ? GLY A 188 . ? 5_555 ? 6 AC1 7 ALA A 200 ? ALA A 199 . ? 1_555 ? 7 AC1 7 HOH K . ? HOH A 344 . ? 1_555 ? 8 AC2 3 ALA A 9 ? ALA A 8 . ? 1_555 ? 9 AC2 3 ALA A 58 ? ALA A 57 . ? 1_555 ? 10 AC2 3 EDO H . ? EDO A 210 . ? 1_555 ? 11 AC3 6 TYR A 129 ? TYR A 128 . ? 1_555 ? 12 AC3 6 THR A 130 ? THR A 129 . ? 1_555 ? 13 AC3 6 VAL A 131 ? VAL A 130 . ? 1_555 ? 14 AC3 6 GLU A 162 ? GLU A 161 . ? 1_555 ? 15 AC3 6 TYR A 172 ? TYR A 171 . ? 1_555 ? 16 AC3 6 HOH K . ? HOH A 227 . ? 1_555 ? 17 AC4 7 PRO A 179 ? PRO A 178 . ? 8_555 ? 18 AC4 7 ASP A 188 ? ASP A 187 . ? 5_555 ? 19 AC4 7 GLY A 189 ? GLY A 188 . ? 5_555 ? 20 AC4 7 LEU A 193 ? LEU A 192 . ? 8_555 ? 21 AC4 7 ALA A 200 ? ALA A 199 . ? 1_555 ? 22 AC4 7 MSE A 201 ? MSE A 200 . ? 1_555 ? 23 AC4 7 PRO A 202 ? PRO A 201 . ? 1_555 ? 24 AC5 8 ILE A 151 ? ILE A 150 . ? 1_555 ? 25 AC5 8 ALA A 154 ? ALA A 153 . ? 1_555 ? 26 AC5 8 GLY A 155 ? GLY A 154 . ? 1_555 ? 27 AC5 8 GLU A 157 ? GLU A 156 . ? 1_555 ? 28 AC5 8 ILE A 159 ? ILE A 158 . ? 1_555 ? 29 AC5 8 LYS A 197 ? LYS A 196 . ? 1_555 ? 30 AC5 8 HOH K . ? HOH A 248 . ? 1_555 ? 31 AC5 8 HOH K . ? HOH A 271 . ? 1_555 ? 32 AC6 4 VAL A 131 ? VAL A 130 . ? 1_555 ? 33 AC6 4 THR A 133 ? THR A 132 . ? 1_555 ? 34 AC6 4 GLY A 143 ? GLY A 142 . ? 1_555 ? 35 AC6 4 EDO I . ? EDO A 211 . ? 1_555 ? 36 AC7 8 PRO A 8 ? PRO A 7 . ? 1_555 ? 37 AC7 8 ASN A 62 ? ASN A 61 . ? 1_555 ? 38 AC7 8 ILE A 63 ? ILE A 62 . ? 1_555 ? 39 AC7 8 ASP A 64 ? ASP A 63 . ? 1_555 ? 40 AC7 8 ARG A 153 ? ARG A 152 . ? 1_555 ? 41 AC7 8 EDO C . ? EDO A 205 . ? 1_555 ? 42 AC7 8 HOH K . ? HOH A 316 . ? 1_555 ? 43 AC7 8 HOH K . ? HOH A 322 . ? 1_555 ? 44 AC8 6 THR A 133 ? THR A 132 . ? 1_555 ? 45 AC8 6 ARG A 138 ? ARG A 137 . ? 1_555 ? 46 AC8 6 GLY A 139 ? GLY A 138 . ? 1_555 ? 47 AC8 6 EDO G . ? EDO A 209 . ? 1_555 ? 48 AC8 6 HOH K . ? HOH A 240 . ? 1_555 ? 49 AC8 6 HOH K . ? HOH A 329 . ? 1_555 ? 50 AC9 8 LEU A 32 ? LEU A 31 . ? 5_555 ? 51 AC9 8 GLN A 37 ? GLN A 36 . ? 5_555 ? 52 AC9 8 ARG A 153 ? ARG A 152 . ? 1_555 ? 53 AC9 8 ALA A 154 ? ALA A 153 . ? 1_555 ? 54 AC9 8 GLY A 155 ? GLY A 154 . ? 1_555 ? 55 AC9 8 ASP A 156 ? ASP A 155 . ? 1_555 ? 56 AC9 8 GLU A 157 ? GLU A 156 . ? 1_555 ? 57 AC9 8 HOH K . ? HOH A 334 . ? 5_555 ? # _atom_sites.entry_id 2QEC _atom_sites.fract_transf_matrix[1][1] 0.01265 _atom_sites.fract_transf_matrix[1][2] 0.00730 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01460 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00552 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 SER 3 2 2 SER SER A . n A 1 4 PRO 4 3 3 PRO PRO A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 VAL 6 5 5 VAL VAL A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 PRO 8 7 7 PRO PRO A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 PHE 14 13 13 PHE PHE A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 ASP 28 27 27 ASP ASP A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 PHE 31 30 30 PHE PHE A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 TRP 34 33 33 TRP TRP A . n A 1 35 ILE 35 34 34 ILE ILE A . n A 1 36 PRO 36 35 35 PRO PRO A . n A 1 37 GLN 37 36 36 GLN GLN A . n A 1 38 PRO 38 37 37 PRO PRO A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 PRO 40 39 39 PRO PRO A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 SER 42 41 41 SER SER A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 LYS 44 43 43 LYS LYS A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 GLU 54 53 53 GLU GLU A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 GLN 56 55 55 GLN GLN A . n A 1 57 TYR 57 56 56 TYR TYR A . n A 1 58 ALA 58 57 57 ALA ALA A . n A 1 59 VAL 59 58 58 VAL VAL A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 ASN 62 61 61 ASN ASN A . n A 1 63 ILE 63 62 62 ILE ILE A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 ARG 67 66 66 ARG ARG A . n A 1 68 ASP 68 67 67 ASP ASP A . n A 1 69 SER 69 68 68 SER SER A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 GLY 71 70 70 GLY GLY A . n A 1 72 GLU 72 71 71 GLU GLU A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 VAL 76 75 75 VAL VAL A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 TRP 79 78 78 TRP TRP A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 ARG 81 80 80 ARG ARG A . n A 1 82 PRO 82 81 81 PRO PRO A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 GLY 84 83 ? ? ? A . n A 1 85 ASN 85 84 ? ? ? A . n A 1 86 HIS 86 85 ? ? ? A . n A 1 87 SER 87 86 ? ? ? A . n A 1 88 ALA 88 87 ? ? ? A . n A 1 89 LYS 89 88 ? ? ? A . n A 1 90 ASP 90 89 ? ? ? A . n A 1 91 GLN 91 90 ? ? ? A . n A 1 92 ALA 92 91 ? ? ? A . n A 1 93 ALA 93 92 ? ? ? A . n A 1 94 MSE 94 93 ? ? ? A . n A 1 95 LEU 95 94 ? ? ? A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 VAL 99 98 98 VAL VAL A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 ILE 101 100 100 ILE ILE A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 ILE 104 103 ? ? ? A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 ALA 107 106 106 ALA ALA A . n A 1 108 GLN 108 107 ? ? ? A . n A 1 109 VAL 109 108 ? ? ? A . n A 1 110 ALA 110 109 ? ? ? A . n A 1 111 TRP 111 110 ? ? ? A . n A 1 112 THR 112 111 ? ? ? A . n A 1 113 ASP 113 112 ? ? ? A . n A 1 114 LEU 114 113 ? ? ? A . n A 1 115 SER 115 114 ? ? ? A . n A 1 116 SER 116 115 ? ? ? A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 ARG 118 117 117 ARG ARG A . n A 1 119 PHE 119 118 118 PHE PHE A . n A 1 120 HIS 120 119 119 HIS HIS A . n A 1 121 PRO 121 120 120 PRO PRO A . n A 1 122 LYS 122 121 121 LYS LYS A . n A 1 123 PHE 123 122 122 PHE PHE A . n A 1 124 PRO 124 123 123 PRO PRO A . n A 1 125 HIS 125 124 124 HIS HIS A . n A 1 126 TRP 126 125 125 TRP TRP A . n A 1 127 TYR 127 126 126 TYR TYR A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 TYR 129 128 128 TYR TYR A . n A 1 130 THR 130 129 129 THR THR A . n A 1 131 VAL 131 130 130 VAL VAL A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 SER 134 133 133 SER SER A . n A 1 135 SER 135 134 134 SER SER A . n A 1 136 SER 136 135 135 SER SER A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 ARG 138 137 137 ARG ARG A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 THR 140 139 139 THR THR A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 VAL 142 141 141 VAL VAL A . n A 1 143 GLY 143 142 142 GLY GLY A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 ALA 145 144 144 ALA ALA A . n A 1 146 LEU 146 145 145 LEU LEU A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 ASN 148 147 147 ASN ASN A . n A 1 149 HIS 149 148 148 HIS HIS A . n A 1 150 GLY 150 149 149 GLY GLY A . n A 1 151 ILE 151 150 150 ILE ILE A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 ARG 153 152 152 ARG ARG A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 GLY 155 154 154 GLY GLY A . n A 1 156 ASP 156 155 155 ASP ASP A . n A 1 157 GLU 157 156 156 GLU GLU A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 ILE 159 158 158 ILE ILE A . n A 1 160 TYR 160 159 159 TYR TYR A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 GLU 162 161 161 GLU GLU A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 THR 164 163 163 THR THR A . n A 1 165 SER 165 164 164 SER SER A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 ARG 167 166 166 ARG ARG A . n A 1 168 ALA 168 167 167 ALA ALA A . n A 1 169 ALA 169 168 168 ALA ALA A . n A 1 170 GLN 170 169 169 GLN GLN A . n A 1 171 LEU 171 170 170 LEU LEU A . n A 1 172 TYR 172 171 171 TYR TYR A . n A 1 173 ASN 173 172 172 ASN ASN A . n A 1 174 ARG 174 173 173 ARG ARG A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 GLY 176 175 175 GLY GLY A . n A 1 177 PHE 177 176 176 PHE PHE A . n A 1 178 VAL 178 177 177 VAL VAL A . n A 1 179 PRO 179 178 178 PRO PRO A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 GLY 181 180 180 GLY GLY A . n A 1 182 TYR 182 181 181 TYR TYR A . n A 1 183 ILE 183 182 182 ILE ILE A . n A 1 184 PRO 184 183 183 PRO PRO A . n A 1 185 SER 185 184 184 SER SER A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 ASP 187 186 186 ASP ASP A . n A 1 188 ASP 188 187 187 ASP ASP A . n A 1 189 GLY 189 188 188 GLY GLY A . n A 1 190 THR 190 189 189 THR THR A . n A 1 191 PRO 191 190 190 PRO PRO A . n A 1 192 GLU 192 191 191 GLU GLU A . n A 1 193 LEU 193 192 192 LEU LEU A . n A 1 194 ALA 194 193 193 ALA ALA A . n A 1 195 MSE 195 194 194 MSE MSE A . n A 1 196 TRP 196 195 195 TRP TRP A . n A 1 197 LYS 197 196 196 LYS LYS A . n A 1 198 PRO 198 197 197 PRO PRO A . n A 1 199 PRO 199 198 198 PRO PRO A . n A 1 200 ALA 200 199 199 ALA ALA A . n A 1 201 MSE 201 200 200 MSE MSE A . n A 1 202 PRO 202 201 201 PRO PRO A . n A 1 203 THR 203 202 202 THR THR A . n A 1 204 VAL 204 203 203 VAL VAL A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 204 1 EDO EDO A . C 2 EDO 1 205 2 EDO EDO A . D 2 EDO 1 206 3 EDO EDO A . E 2 EDO 1 207 4 EDO EDO A . F 2 EDO 1 208 5 EDO EDO A . G 2 EDO 1 209 6 EDO EDO A . H 2 EDO 1 210 7 EDO EDO A . I 2 EDO 1 211 8 EDO EDO A . J 2 EDO 1 212 9 EDO EDO A . K 3 HOH 1 213 10 HOH HOH A . K 3 HOH 2 214 11 HOH HOH A . K 3 HOH 3 215 12 HOH HOH A . K 3 HOH 4 216 13 HOH HOH A . K 3 HOH 5 217 14 HOH HOH A . K 3 HOH 6 218 15 HOH HOH A . K 3 HOH 7 219 16 HOH HOH A . K 3 HOH 8 220 17 HOH HOH A . K 3 HOH 9 221 18 HOH HOH A . K 3 HOH 10 222 19 HOH HOH A . K 3 HOH 11 223 20 HOH HOH A . K 3 HOH 12 224 21 HOH HOH A . K 3 HOH 13 225 22 HOH HOH A . K 3 HOH 14 226 23 HOH HOH A . K 3 HOH 15 227 24 HOH HOH A . K 3 HOH 16 228 25 HOH HOH A . K 3 HOH 17 229 26 HOH HOH A . K 3 HOH 18 230 27 HOH HOH A . K 3 HOH 19 231 28 HOH HOH A . K 3 HOH 20 232 29 HOH HOH A . K 3 HOH 21 233 30 HOH HOH A . K 3 HOH 22 234 31 HOH HOH A . K 3 HOH 23 235 32 HOH HOH A . K 3 HOH 24 236 33 HOH HOH A . K 3 HOH 25 237 34 HOH HOH A . K 3 HOH 26 238 35 HOH HOH A . K 3 HOH 27 239 36 HOH HOH A . K 3 HOH 28 240 37 HOH HOH A . K 3 HOH 29 241 38 HOH HOH A . K 3 HOH 30 242 39 HOH HOH A . K 3 HOH 31 243 40 HOH HOH A . K 3 HOH 32 244 41 HOH HOH A . K 3 HOH 33 245 42 HOH HOH A . K 3 HOH 34 246 43 HOH HOH A . K 3 HOH 35 247 44 HOH HOH A . K 3 HOH 36 248 45 HOH HOH A . K 3 HOH 37 249 46 HOH HOH A . K 3 HOH 38 250 47 HOH HOH A . K 3 HOH 39 251 48 HOH HOH A . K 3 HOH 40 252 49 HOH HOH A . K 3 HOH 41 253 50 HOH HOH A . K 3 HOH 42 254 51 HOH HOH A . K 3 HOH 43 255 52 HOH HOH A . K 3 HOH 44 256 53 HOH HOH A . K 3 HOH 45 257 54 HOH HOH A . K 3 HOH 46 258 55 HOH HOH A . K 3 HOH 47 259 56 HOH HOH A . K 3 HOH 48 260 57 HOH HOH A . K 3 HOH 49 261 58 HOH HOH A . K 3 HOH 50 262 59 HOH HOH A . K 3 HOH 51 263 60 HOH HOH A . K 3 HOH 52 264 61 HOH HOH A . K 3 HOH 53 265 62 HOH HOH A . K 3 HOH 54 266 63 HOH HOH A . K 3 HOH 55 267 64 HOH HOH A . K 3 HOH 56 268 65 HOH HOH A . K 3 HOH 57 269 66 HOH HOH A . K 3 HOH 58 270 67 HOH HOH A . K 3 HOH 59 271 68 HOH HOH A . K 3 HOH 60 272 69 HOH HOH A . K 3 HOH 61 273 70 HOH HOH A . K 3 HOH 62 274 71 HOH HOH A . K 3 HOH 63 275 72 HOH HOH A . K 3 HOH 64 276 73 HOH HOH A . K 3 HOH 65 277 74 HOH HOH A . K 3 HOH 66 278 75 HOH HOH A . K 3 HOH 67 279 76 HOH HOH A . K 3 HOH 68 280 77 HOH HOH A . K 3 HOH 69 281 78 HOH HOH A . K 3 HOH 70 282 79 HOH HOH A . K 3 HOH 71 283 80 HOH HOH A . K 3 HOH 72 284 81 HOH HOH A . K 3 HOH 73 285 82 HOH HOH A . K 3 HOH 74 286 83 HOH HOH A . K 3 HOH 75 287 84 HOH HOH A . K 3 HOH 76 288 85 HOH HOH A . K 3 HOH 77 289 86 HOH HOH A . K 3 HOH 78 290 87 HOH HOH A . K 3 HOH 79 291 88 HOH HOH A . K 3 HOH 80 292 89 HOH HOH A . K 3 HOH 81 293 90 HOH HOH A . K 3 HOH 82 294 91 HOH HOH A . K 3 HOH 83 295 92 HOH HOH A . K 3 HOH 84 296 93 HOH HOH A . K 3 HOH 85 297 94 HOH HOH A . K 3 HOH 86 298 95 HOH HOH A . K 3 HOH 87 299 96 HOH HOH A . K 3 HOH 88 300 97 HOH HOH A . K 3 HOH 89 301 98 HOH HOH A . K 3 HOH 90 302 99 HOH HOH A . K 3 HOH 91 303 100 HOH HOH A . K 3 HOH 92 304 101 HOH HOH A . K 3 HOH 93 305 102 HOH HOH A . K 3 HOH 94 306 103 HOH HOH A . K 3 HOH 95 307 104 HOH HOH A . K 3 HOH 96 308 105 HOH HOH A . K 3 HOH 97 309 106 HOH HOH A . K 3 HOH 98 310 107 HOH HOH A . K 3 HOH 99 311 108 HOH HOH A . K 3 HOH 100 312 109 HOH HOH A . K 3 HOH 101 313 110 HOH HOH A . K 3 HOH 102 314 111 HOH HOH A . K 3 HOH 103 315 112 HOH HOH A . K 3 HOH 104 316 113 HOH HOH A . K 3 HOH 105 317 114 HOH HOH A . K 3 HOH 106 318 115 HOH HOH A . K 3 HOH 107 319 116 HOH HOH A . K 3 HOH 108 320 117 HOH HOH A . K 3 HOH 109 321 118 HOH HOH A . K 3 HOH 110 322 119 HOH HOH A . K 3 HOH 111 323 120 HOH HOH A . K 3 HOH 112 324 121 HOH HOH A . K 3 HOH 113 325 122 HOH HOH A . K 3 HOH 114 326 123 HOH HOH A . K 3 HOH 115 327 124 HOH HOH A . K 3 HOH 116 328 125 HOH HOH A . K 3 HOH 117 329 126 HOH HOH A . K 3 HOH 118 330 127 HOH HOH A . K 3 HOH 119 331 128 HOH HOH A . K 3 HOH 120 332 129 HOH HOH A . K 3 HOH 121 333 130 HOH HOH A . K 3 HOH 122 334 131 HOH HOH A . K 3 HOH 123 335 132 HOH HOH A . K 3 HOH 124 336 133 HOH HOH A . K 3 HOH 125 337 134 HOH HOH A . K 3 HOH 126 338 135 HOH HOH A . K 3 HOH 127 339 136 HOH HOH A . K 3 HOH 128 340 137 HOH HOH A . K 3 HOH 129 341 138 HOH HOH A . K 3 HOH 130 342 139 HOH HOH A . K 3 HOH 131 343 140 HOH HOH A . K 3 HOH 132 344 141 HOH HOH A . K 3 HOH 133 345 142 HOH HOH A . K 3 HOH 134 346 143 HOH HOH A . K 3 HOH 135 347 144 HOH HOH A . K 3 HOH 136 348 145 HOH HOH A . K 3 HOH 137 349 146 HOH HOH A . K 3 HOH 138 350 147 HOH HOH A . K 3 HOH 139 351 148 HOH HOH A . K 3 HOH 140 352 149 HOH HOH A . K 3 HOH 141 353 150 HOH HOH A . K 3 HOH 142 354 151 HOH HOH A . K 3 HOH 143 355 152 HOH HOH A . K 3 HOH 144 356 153 HOH HOH A . K 3 HOH 145 357 154 HOH HOH A . K 3 HOH 146 358 155 HOH HOH A . K 3 HOH 147 359 156 HOH HOH A . K 3 HOH 148 360 157 HOH HOH A . K 3 HOH 149 361 158 HOH HOH A . K 3 HOH 150 362 159 HOH HOH A . K 3 HOH 151 363 160 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 195 A MSE 194 ? MET SELENOMETHIONINE 3 A MSE 201 A MSE 200 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5330 ? 1 MORE 27 ? 1 'SSA (A^2)' 18650 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-10 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2021-10-20 7 'Structure model' 1 6 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' 9 7 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site 7 7 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 10 7 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 14.8510 26.0130 4.5030 -0.0148 -0.2175 -0.1478 0.0085 -0.0784 -0.0622 1.5341 0.5747 3.9742 -0.1742 1.0368 0.6867 0.0749 -0.2460 0.1711 -0.0492 0.0814 0.2036 -0.2093 -0.1457 -0.3169 'X-RAY DIFFRACTION' 2 ? refined 21.7540 11.2450 0.6380 0.0135 -0.2329 -0.1767 -0.0208 -0.0382 0.0157 0.6385 4.1358 1.7819 0.4625 -0.0444 1.7665 0.0320 -0.0852 0.0532 0.1007 -0.0192 -0.0303 -0.3209 -0.2008 -0.1311 'X-RAY DIFFRACTION' 3 ? refined -1.6160 22.7640 2.0370 0.6811 0.8726 0.7619 0.0576 -0.0052 -0.0930 20.1585 49.7283 49.3682 20.5462 7.4903 24.3809 -0.0307 -0.8503 0.8810 -0.9469 -0.8857 1.7972 2.8940 1.8854 -2.7126 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 2 A 83 ALL A 1 A 82 'X-RAY DIFFRACTION' ? 2 2 A 118 A 204 ALL A 117 A 203 'X-RAY DIFFRACTION' ? 3 3 A 96 A 107 ALL A 95 A 106 'X-RAY DIFFRACTION' ? # loop_ _phasing.method MAD MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 2 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 Blu-Ice 'v 5.0' ? ? ? ? 'data collection' ? ? ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 SCALA . ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 PHASER . ? ? ? ? phasing ? ? ? 11 # _pdbx_entry_details.entry_id 2QEC _pdbx_entry_details.sequence_details ;1. THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE, FOLLOWED BY THE TARGET SEQUENCE. 2. THE CONSTRUCT WAS ENGINEERED WITH THE FOLLOWING MUTATION: A29T. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 55 ? ? -125.07 -57.97 2 1 ALA A 105 ? ? -131.83 -109.01 3 1 ASP A 186 ? ? 50.67 -28.61 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id ALA _pdbx_validate_chiral.auth_seq_id 105 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 82 ? CG ? A ASP 83 CG 2 1 Y 1 A ASP 82 ? OD1 ? A ASP 83 OD1 3 1 Y 1 A ASP 82 ? OD2 ? A ASP 83 OD2 4 1 Y 1 A VAL 98 ? CG1 ? A VAL 99 CG1 5 1 Y 1 A VAL 98 ? CG2 ? A VAL 99 CG2 6 1 Y 1 A ARG 117 ? CG ? A ARG 118 CG 7 1 Y 1 A ARG 117 ? CD ? A ARG 118 CD 8 1 Y 1 A ARG 117 ? NE ? A ARG 118 NE 9 1 Y 1 A ARG 117 ? CZ ? A ARG 118 CZ 10 1 Y 1 A ARG 117 ? NH1 ? A ARG 118 NH1 11 1 Y 1 A ARG 117 ? NH2 ? A ARG 118 NH2 12 1 Y 1 A ASP 186 ? CG ? A ASP 187 CG 13 1 Y 1 A ASP 186 ? OD1 ? A ASP 187 OD1 14 1 Y 1 A ASP 186 ? OD2 ? A ASP 187 OD2 15 1 Y 1 A ASP 187 ? CG ? A ASP 188 CG 16 1 Y 1 A ASP 187 ? OD1 ? A ASP 188 OD1 17 1 Y 1 A ASP 187 ? OD2 ? A ASP 188 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLY 83 ? A GLY 84 3 1 Y 1 A ASN 84 ? A ASN 85 4 1 Y 1 A HIS 85 ? A HIS 86 5 1 Y 1 A SER 86 ? A SER 87 6 1 Y 1 A ALA 87 ? A ALA 88 7 1 Y 1 A LYS 88 ? A LYS 89 8 1 Y 1 A ASP 89 ? A ASP 90 9 1 Y 1 A GLN 90 ? A GLN 91 10 1 Y 1 A ALA 91 ? A ALA 92 11 1 Y 1 A ALA 92 ? A ALA 93 12 1 Y 1 A MSE 93 ? A MSE 94 13 1 Y 1 A LEU 94 ? A LEU 95 14 1 Y 1 A ILE 103 ? A ILE 104 15 1 Y 1 A GLN 107 ? A GLN 108 16 1 Y 1 A VAL 108 ? A VAL 109 17 1 Y 1 A ALA 109 ? A ALA 110 18 1 Y 1 A TRP 110 ? A TRP 111 19 1 Y 1 A THR 111 ? A THR 112 20 1 Y 1 A ASP 112 ? A ASP 113 21 1 Y 1 A LEU 113 ? A LEU 114 22 1 Y 1 A SER 114 ? A SER 115 23 1 Y 1 A SER 115 ? A SER 116 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #