HEADER TRANSCRIPTION REPRESSOR/DNA 27-JUN-07 2QFJ TITLE CRYSTAL STRUCTURE OF FIRST TWO RRM DOMAINS OF FIR BOUND TO SSDNA FROM TITLE 2 A PORTION OF FUSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*DTP*DCP*DGP*DGP*DGP*DAP*DTP*DTP*DTP*DTP*DTP*DTP*DAP*DTP*DTP*DTP*DT COMPND 4 P*DGP*DTP*DGP*DTP*DTP*DAP*DTP*DT)-3'); COMPND 5 CHAIN: C; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: 25-BASE SEQUENCE FROM THE NON-CODING STRAND OF FUSE, COMPND 8 UPSTREAM OF THE C-MYC GENE; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: FBP-INTERACTING REPRESSOR; COMPND 11 CHAIN: A, B; COMPND 12 SYNONYM: FUSE-BINDING PROTEIN-INTERACTING REPRESSOR; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE NATURALLY OCCURS IN HUMANS IN AN SOURCE 4 ENCHANCER OF THE C-MYC GENE KNOWN AS THE FAR UP STREAM ELEMENT SOURCE 5 (FUSE); SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: FIR, SIAHBP1; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PROTEIN-DNA COMPLEX, RRM DOMAINS, TRANSCRIPTION REPRESSOR-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.V.CRICHLOW,Y.YANG,C.FAN,E.LOLIS,D.BRADDOCK REVDAT 5 21-FEB-24 2QFJ 1 REMARK REVDAT 4 20-OCT-21 2QFJ 1 SEQADV REVDAT 3 18-OCT-17 2QFJ 1 REMARK REVDAT 2 24-FEB-09 2QFJ 1 VERSN REVDAT 1 04-MAR-08 2QFJ 0 JRNL AUTH G.V.CRICHLOW,H.ZHOU,H.-H.HSIAO,K.B.FREDERICK,M.DEBROSSE, JRNL AUTH 2 Y.YANG,E.J.FOLTA-STOGNIEW,H.-J.CHUNG,C.FAN,E.M.DE LA CRUZ, JRNL AUTH 3 D.LEVENS,E.LOLIS,D.BRADDOCK JRNL TITL DIMERIZATION OF FIR UPON FUSE DNA BINDING SUGGESTS A JRNL TITL 2 MECHANISM OF C-MYC INHIBITION JRNL REF EMBO J. V. 27 277 2007 JRNL REFN ISSN 0261-4189 JRNL PMID 18059478 JRNL DOI 10.1038/SJ.EMBOJ.7601936 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 761627.240 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 19562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 953 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1693 REMARK 3 BIN R VALUE (WORKING SET) : 0.3890 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 96 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.042 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2947 REMARK 3 NUCLEIC ACID ATOMS : 41 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM SIGMAA (A) : 0.42 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.41 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.250 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.120 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.780 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.470 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 81.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 2QFJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-05; 01-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X25; X25 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1; 0.9794, 0.9798, 0.9600 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20889 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: AMORE, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 27.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR: 0.1 M TRIS-HCL, 32% PEG REMARK 280 4000, PH 8.5 MIXED 1:1 WITH PROTEIN/DNA COMPLEX IN 20 MM TRIS- REMARK 280 HCL (PH 8.0), 100 MM NACL, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.52967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.05933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS PROPOSE THAT THE BIOLOGICAL UNIT IS THE SAME AS THE REMARK 300 ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DG C 3 REMARK 465 DG C 4 REMARK 465 DG C 5 REMARK 465 DA C 6 REMARK 465 DT C 7 REMARK 465 DT C 8 REMARK 465 DT C 9 REMARK 465 DT C 10 REMARK 465 DT C 11 REMARK 465 DT C 12 REMARK 465 DA C 13 REMARK 465 DT C 14 REMARK 465 DT C 15 REMARK 465 DT C 16 REMARK 465 DT C 17 REMARK 465 DG C 18 REMARK 465 DT C 19 REMARK 465 DG C 20 REMARK 465 DT C 21 REMARK 465 DT C 22 REMARK 465 DT C 25 REMARK 465 GLY A 84 REMARK 465 SER A 85 REMARK 465 HIS A 86 REMARK 465 MET A 87 REMARK 465 ALA A 88 REMARK 465 SER A 89 REMARK 465 MET A 90 REMARK 465 THR A 91 REMARK 465 GLY A 92 REMARK 465 GLY A 93 REMARK 465 GLN A 94 REMARK 465 GLN A 95 REMARK 465 MET A 96 REMARK 465 GLY A 97 REMARK 465 ARG A 98 REMARK 465 GLY A 99 REMARK 465 SER A 147 REMARK 465 MET A 150 REMARK 465 GLY A 179 REMARK 465 ALA A 296 REMARK 465 THR A 297 REMARK 465 PRO A 298 REMARK 465 GLY A 299 REMARK 465 GLY B 84 REMARK 465 SER B 85 REMARK 465 HIS B 86 REMARK 465 MET B 87 REMARK 465 ALA B 88 REMARK 465 SER B 89 REMARK 465 MET B 90 REMARK 465 THR B 91 REMARK 465 GLY B 92 REMARK 465 GLY B 93 REMARK 465 GLN B 94 REMARK 465 GLN B 95 REMARK 465 MET B 96 REMARK 465 GLY B 97 REMARK 465 ARG B 98 REMARK 465 GLY B 99 REMARK 465 THR B 294 REMARK 465 PRO B 295 REMARK 465 ALA B 296 REMARK 465 THR B 297 REMARK 465 PRO B 298 REMARK 465 GLY B 299 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT C 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DT C 1 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 1 C7 C6 REMARK 470 DA C 23 P OP1 OP2 O5' REMARK 470 DT C 24 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DT C 24 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 24 C7 C6 REMARK 470 SER A 144 CB OG REMARK 470 VAL A 148 CG1 CG2 REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 ARG A 181 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL A 185 CG1 CG2 REMARK 470 LEU A 293 CB CG CD1 CD2 REMARK 470 SER B 118 CB OG REMARK 470 HIS B 152 CB CG ND1 CD2 CE1 NE2 REMARK 470 MET B 177 CE REMARK 470 LEU B 178 CB CG CD1 CD2 REMARK 470 LYS B 248 CB CG CD CE NZ REMARK 470 LEU B 293 CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 146 N VAL B 148 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 1 O3' DC C 2 P -0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C 23 C3' - C2' - C1' ANGL. DEV. = -8.3 DEGREES REMARK 500 PRO A 291 C - N - CA ANGL. DEV. = 10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 118 42.67 72.68 REMARK 500 SER A 144 155.11 -49.31 REMARK 500 LYS A 153 11.76 -66.01 REMARK 500 ASN A 174 74.88 -63.73 REMARK 500 SER A 175 -137.86 -156.63 REMARK 500 MET A 177 67.77 -112.31 REMARK 500 ASN A 182 -56.94 -137.82 REMARK 500 ASN A 190 49.08 -98.02 REMARK 500 ASN A 209 67.39 -108.64 REMARK 500 GLU A 230 2.30 -65.86 REMARK 500 LYS A 250 30.07 -90.56 REMARK 500 PRO A 289 -73.66 -30.70 REMARK 500 PRO A 291 61.97 -67.20 REMARK 500 LEU A 292 24.81 158.82 REMARK 500 LEU A 293 -112.86 -63.44 REMARK 500 SER B 118 42.32 72.98 REMARK 500 SER B 144 155.02 -49.91 REMARK 500 SER B 147 -18.58 43.06 REMARK 500 VAL B 148 -64.46 -123.52 REMARK 500 MET B 150 43.44 92.26 REMARK 500 ASN B 174 74.31 -63.52 REMARK 500 SER B 175 -140.17 -155.83 REMARK 500 MET B 177 68.90 -111.27 REMARK 500 LEU B 178 91.94 90.98 REMARK 500 ASN B 182 -55.91 -139.71 REMARK 500 ASN B 190 49.09 -97.84 REMARK 500 ASN B 209 67.27 -109.16 REMARK 500 LYS B 250 30.06 -90.64 REMARK 500 PRO B 289 -57.74 -27.38 REMARK 500 PRO B 291 39.32 -59.03 REMARK 500 LEU B 292 89.44 -177.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE REPORTED FOR THE DNA IN CHAIN C IS REMARK 999 COMPLIMENTARY TO THAT IN THE SEQUENCE DATABASE REMARK 999 REFERENCE DBREF 2QFJ C 1 25 GB 188913 AH002904 146 170 DBREF 2QFJ A 101 299 UNP Q9NZA0 Q9NZA0_HUMAN 101 299 DBREF 2QFJ B 101 299 UNP Q9NZA0 Q9NZA0_HUMAN 101 299 SEQADV 2QFJ GLY A 84 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ SER A 85 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ HIS A 86 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ MET A 87 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ ALA A 88 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ SER A 89 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ MET A 90 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ THR A 91 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY A 92 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY A 93 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLN A 94 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLN A 95 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ MET A 96 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY A 97 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ ARG A 98 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY A 99 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ SER A 100 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY A 106 UNP Q9NZA0 ARG 106 ENGINEERED MUTATION SEQADV 2QFJ SER A 112 UNP Q9NZA0 CYS 112 ENGINEERED MUTATION SEQADV 2QFJ ALA A 238 UNP Q9NZA0 CYS 238 ENGINEERED MUTATION SEQADV 2QFJ GLY B 84 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ SER B 85 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ HIS B 86 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ MET B 87 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ ALA B 88 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ SER B 89 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ MET B 90 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ THR B 91 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY B 92 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY B 93 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLN B 94 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLN B 95 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ MET B 96 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY B 97 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ ARG B 98 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY B 99 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ SER B 100 UNP Q9NZA0 EXPRESSION TAG SEQADV 2QFJ GLY B 106 UNP Q9NZA0 ARG 106 ENGINEERED MUTATION SEQADV 2QFJ SER B 112 UNP Q9NZA0 CYS 112 ENGINEERED MUTATION SEQADV 2QFJ ALA B 238 UNP Q9NZA0 CYS 238 ENGINEERED MUTATION SEQRES 1 C 25 DT DC DG DG DG DA DT DT DT DT DT DT DA SEQRES 2 C 25 DT DT DT DT DG DT DG DT DT DA DT DT SEQRES 1 A 216 GLY SER HIS MET ALA SER MET THR GLY GLY GLN GLN MET SEQRES 2 A 216 GLY ARG GLY SER ALA ALA GLN ARG GLN GLY ALA LEU ALA SEQRES 3 A 216 ILE MET SER ARG VAL TYR VAL GLY SER ILE TYR TYR GLU SEQRES 4 A 216 LEU GLY GLU ASP THR ILE ARG GLN ALA PHE ALA PRO PHE SEQRES 5 A 216 GLY PRO ILE LYS SER ILE ASP MET SER TRP ASP SER VAL SEQRES 6 A 216 THR MET LYS HIS LYS GLY PHE ALA PHE VAL GLU TYR GLU SEQRES 7 A 216 VAL PRO GLU ALA ALA GLN LEU ALA LEU GLU GLN MET ASN SEQRES 8 A 216 SER VAL MET LEU GLY GLY ARG ASN ILE LYS VAL GLY ARG SEQRES 9 A 216 PRO SER ASN ILE GLY GLN ALA GLN PRO ILE ILE ASP GLN SEQRES 10 A 216 LEU ALA GLU GLU ALA ARG ALA PHE ASN ARG ILE TYR VAL SEQRES 11 A 216 ALA SER VAL HIS GLN ASP LEU SER ASP ASP ASP ILE LYS SEQRES 12 A 216 SER VAL PHE GLU ALA PHE GLY LYS ILE LYS SER ALA THR SEQRES 13 A 216 LEU ALA ARG ASP PRO THR THR GLY LYS HIS LYS GLY TYR SEQRES 14 A 216 GLY PHE ILE GLU TYR GLU LYS ALA GLN SER SER GLN ASP SEQRES 15 A 216 ALA VAL SER SER MET ASN LEU PHE ASP LEU GLY GLY GLN SEQRES 16 A 216 TYR LEU ARG VAL GLY LYS ALA VAL THR PRO PRO MET PRO SEQRES 17 A 216 LEU LEU THR PRO ALA THR PRO GLY SEQRES 1 B 216 GLY SER HIS MET ALA SER MET THR GLY GLY GLN GLN MET SEQRES 2 B 216 GLY ARG GLY SER ALA ALA GLN ARG GLN GLY ALA LEU ALA SEQRES 3 B 216 ILE MET SER ARG VAL TYR VAL GLY SER ILE TYR TYR GLU SEQRES 4 B 216 LEU GLY GLU ASP THR ILE ARG GLN ALA PHE ALA PRO PHE SEQRES 5 B 216 GLY PRO ILE LYS SER ILE ASP MET SER TRP ASP SER VAL SEQRES 6 B 216 THR MET LYS HIS LYS GLY PHE ALA PHE VAL GLU TYR GLU SEQRES 7 B 216 VAL PRO GLU ALA ALA GLN LEU ALA LEU GLU GLN MET ASN SEQRES 8 B 216 SER VAL MET LEU GLY GLY ARG ASN ILE LYS VAL GLY ARG SEQRES 9 B 216 PRO SER ASN ILE GLY GLN ALA GLN PRO ILE ILE ASP GLN SEQRES 10 B 216 LEU ALA GLU GLU ALA ARG ALA PHE ASN ARG ILE TYR VAL SEQRES 11 B 216 ALA SER VAL HIS GLN ASP LEU SER ASP ASP ASP ILE LYS SEQRES 12 B 216 SER VAL PHE GLU ALA PHE GLY LYS ILE LYS SER ALA THR SEQRES 13 B 216 LEU ALA ARG ASP PRO THR THR GLY LYS HIS LYS GLY TYR SEQRES 14 B 216 GLY PHE ILE GLU TYR GLU LYS ALA GLN SER SER GLN ASP SEQRES 15 B 216 ALA VAL SER SER MET ASN LEU PHE ASP LEU GLY GLY GLN SEQRES 16 B 216 TYR LEU ARG VAL GLY LYS ALA VAL THR PRO PRO MET PRO SEQRES 17 B 216 LEU LEU THR PRO ALA THR PRO GLY FORMUL 4 HOH *22(H2 O) HELIX 1 1 SER A 100 SER A 112 1 13 HELIX 2 2 GLY A 124 ALA A 133 1 10 HELIX 3 3 PRO A 134 GLY A 136 5 3 HELIX 4 4 VAL A 162 ASN A 174 1 13 HELIX 5 5 ILE A 191 GLN A 193 5 3 HELIX 6 6 ALA A 194 ARG A 206 1 13 HELIX 7 7 SER A 221 GLU A 230 1 10 HELIX 8 8 LYS A 259 ASN A 271 1 13 HELIX 9 9 SER B 100 SER B 112 1 13 HELIX 10 10 GLY B 124 ALA B 133 1 10 HELIX 11 11 PRO B 134 GLY B 136 5 3 HELIX 12 12 VAL B 162 ASN B 174 1 13 HELIX 13 13 ILE B 191 GLN B 193 5 3 HELIX 14 14 ALA B 194 ARG B 206 1 13 HELIX 15 15 SER B 221 GLU B 230 1 10 HELIX 16 16 LYS B 259 ASN B 271 1 13 SHEET 1 A 4 ILE A 138 MET A 143 0 SHEET 2 A 4 PHE A 155 TYR A 160 -1 O PHE A 157 N ASP A 142 SHEET 3 A 4 ARG A 113 GLY A 117 -1 N VAL A 114 O VAL A 158 SHEET 4 A 4 LYS A 184 GLY A 186 -1 O LYS A 184 N GLY A 117 SHEET 1 B 4 ILE A 235 ARG A 242 0 SHEET 2 B 4 HIS A 249 TYR A 257 -1 O GLU A 256 N SER A 237 SHEET 3 B 4 ARG A 210 ALA A 214 -1 N VAL A 213 O GLY A 253 SHEET 4 B 4 ARG A 281 LYS A 284 -1 O GLY A 283 N TYR A 212 SHEET 1 C 4 ILE B 138 MET B 143 0 SHEET 2 C 4 PHE B 155 TYR B 160 -1 O PHE B 157 N ASP B 142 SHEET 3 C 4 ARG B 113 GLY B 117 -1 N VAL B 114 O VAL B 158 SHEET 4 C 4 LYS B 184 GLY B 186 -1 O LYS B 184 N GLY B 117 SHEET 1 D 4 ILE B 235 ARG B 242 0 SHEET 2 D 4 HIS B 249 TYR B 257 -1 O GLU B 256 N SER B 237 SHEET 3 D 4 ARG B 210 ALA B 214 -1 N VAL B 213 O GLY B 253 SHEET 4 D 4 ARG B 281 LYS B 284 -1 O GLY B 283 N TYR B 212 CRYST1 63.135 63.135 82.589 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015839 0.009145 0.000000 0.00000 SCALE2 0.000000 0.018289 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012108 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.500100 0.866000 0.000000 31.56130 1 MTRIX2 2 0.866000 0.500100 -0.000100 -18.23030 1 MTRIX3 2 -0.000100 -0.000100 -1.000000 -72.37410 1