HEADER TRANSCRIPTION 29-JUN-07 2QH6 TITLE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN TITLE 2 COMPLEXED WITH AN OXABICYCLIC DIARYLETHYLENE COMPOUND CAVEAT 2QH6 CHIRALITY ERROR AT SER305A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: STEROID-BINDING REGION, RESIDUES 298-554; COMPND 5 SYNONYM: ER, ESTRADIOL RECEPTOR, ER-ALPHA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 14 ORGANISM_COMMON: MOUSE; SOURCE 15 ORGANISM_TAXID: 10090 KEYWDS PROTEIN-LIGAND COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.W.NETTLES,J.B.BRUNING,J.NOWAK,S.K.SHARMA,J.B.HAHM,Y.SHI,K.KULP, AUTHOR 2 R.B.HOCHBERG,H.ZHOU,J.A.KATZENELLENBOGEN,B.S.KATZENELLENBOGEN,Y.KIM, AUTHOR 3 A.JOACHMIAK,G.L.GREENE REVDAT 7 30-AUG-23 2QH6 1 REMARK REVDAT 6 20-OCT-21 2QH6 1 SOURCE REMARK SEQADV REVDAT 5 18-OCT-17 2QH6 1 REMARK REVDAT 4 13-JUL-11 2QH6 1 VERSN REVDAT 3 24-FEB-09 2QH6 1 VERSN REVDAT 2 01-APR-08 2QH6 1 JRNL REVDAT 1 18-MAR-08 2QH6 0 JRNL AUTH K.W.NETTLES,J.B.BRUNING,G.GIL,J.NOWAK,S.K.SHARMA,J.B.HAHM, JRNL AUTH 2 K.KULP,R.B.HOCHBERG,H.ZHOU,J.A.KATZENELLENBOGEN, JRNL AUTH 3 B.S.KATZENELLENBOGEN,Y.KIM,A.JOACHMIAK,G.L.GREENE JRNL TITL NFKAPPAB SELECTIVITY OF ESTROGEN RECEPTOR LIGANDS REVEALED JRNL TITL 2 BY COMPARATIVE CRYSTALLOGRAPHIC ANALYSES JRNL REF NAT.CHEM.BIOL. V. 4 241 2008 JRNL REFN ISSN 1552-4450 JRNL PMID 18344977 JRNL DOI 10.1038/NCHEMBIO.76 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 13275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 691 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 910 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3845 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 17.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.11000 REMARK 3 B22 (A**2) : 4.93000 REMARK 3 B33 (A**2) : -3.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.56000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.452 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.315 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.856 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4018 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5424 ; 1.920 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 471 ; 6.179 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;40.287 ;23.908 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 761 ;20.918 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;29.452 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 636 ; 0.212 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2889 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2114 ; 0.268 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2785 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 120 ; 0.170 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.291 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.243 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2444 ; 1.665 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3852 ; 2.444 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1732 ; 3.598 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1572 ; 5.372 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 304 A 460 REMARK 3 ORIGIN FOR THE GROUP (A): -22.5610 1.2415 32.5387 REMARK 3 T TENSOR REMARK 3 T11: 0.1383 T22: 0.1206 REMARK 3 T33: 0.0570 T12: 0.0006 REMARK 3 T13: 0.0433 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.8934 L22: 1.2590 REMARK 3 L33: 1.7482 L12: 0.2639 REMARK 3 L13: 0.9036 L23: -0.3003 REMARK 3 S TENSOR REMARK 3 S11: -0.0431 S12: -0.1134 S13: -0.0054 REMARK 3 S21: -0.0080 S22: 0.0415 S23: 0.0052 REMARK 3 S31: -0.0902 S32: -0.0240 S33: 0.0016 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 461 A 548 REMARK 3 ORIGIN FOR THE GROUP (A): -22.2898 -1.8916 23.5540 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.1077 REMARK 3 T33: 0.0481 T12: 0.0093 REMARK 3 T13: 0.0497 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 2.3408 L22: 1.0256 REMARK 3 L33: 1.2042 L12: -0.2281 REMARK 3 L13: 1.0436 L23: -0.5776 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: -0.0015 S13: 0.0247 REMARK 3 S21: -0.0075 S22: -0.0255 S23: -0.0541 REMARK 3 S31: -0.0103 S32: 0.0694 S33: 0.0541 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 305 B 461 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8886 -1.8188 3.1685 REMARK 3 T TENSOR REMARK 3 T11: 0.1517 T22: 0.0930 REMARK 3 T33: 0.0543 T12: -0.0093 REMARK 3 T13: 0.0238 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.6014 L22: 0.8400 REMARK 3 L33: 1.0998 L12: -0.3351 REMARK 3 L13: -0.2882 L23: 0.1501 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.0209 S13: -0.0503 REMARK 3 S21: -0.0836 S22: 0.0271 S23: -0.0202 REMARK 3 S31: -0.0362 S32: -0.0482 S33: -0.0100 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 473 B 547 REMARK 3 ORIGIN FOR THE GROUP (A): -17.6625 0.8553 10.0364 REMARK 3 T TENSOR REMARK 3 T11: 0.1263 T22: 0.1334 REMARK 3 T33: 0.0549 T12: -0.0094 REMARK 3 T13: 0.0199 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 3.8784 L22: 0.2374 REMARK 3 L33: 0.4173 L12: -0.1487 REMARK 3 L13: -0.0115 L23: 0.3114 REMARK 3 S TENSOR REMARK 3 S11: 0.1060 S12: -0.1005 S13: -0.0151 REMARK 3 S21: 0.0317 S22: 0.0045 S23: -0.0124 REMARK 3 S31: -0.0031 S32: 0.0083 S33: -0.1105 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 687 C 691 REMARK 3 ORIGIN FOR THE GROUP (A): -14.3690 -17.2791 37.9856 REMARK 3 T TENSOR REMARK 3 T11: 0.3287 T22: 0.2193 REMARK 3 T33: 0.3924 T12: 0.1402 REMARK 3 T13: -0.1190 T23: -0.2178 REMARK 3 L TENSOR REMARK 3 L11: 1.3602 L22: 27.2629 REMARK 3 L33: 12.4978 L12: -4.9900 REMARK 3 L13: 3.0696 L23: -18.3246 REMARK 3 S TENSOR REMARK 3 S11: -1.2810 S12: 0.6595 S13: -2.8357 REMARK 3 S21: -0.3500 S22: 1.0770 S23: -0.9366 REMARK 3 S31: -0.9497 S32: 1.2918 S33: 0.2040 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 692 C 696 REMARK 3 ORIGIN FOR THE GROUP (A): -20.9974 -17.0896 40.8271 REMARK 3 T TENSOR REMARK 3 T11: 0.2693 T22: 0.0064 REMARK 3 T33: 0.1066 T12: -0.0964 REMARK 3 T13: -0.0892 T23: 0.3110 REMARK 3 L TENSOR REMARK 3 L11: 119.3371 L22: 93.6683 REMARK 3 L33: 21.8458 L12: 33.7503 REMARK 3 L13: -0.1588 L23: -42.9136 REMARK 3 S TENSOR REMARK 3 S11: 0.5135 S12: -5.3473 S13: -3.3327 REMARK 3 S21: 2.8674 S22: -2.6567 S23: -2.0127 REMARK 3 S31: -0.5520 S32: -1.3003 S33: 2.1431 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 687 D 691 REMARK 3 ORIGIN FOR THE GROUP (A): -1.3111 15.8952 4.0825 REMARK 3 T TENSOR REMARK 3 T11: 0.3257 T22: 0.0204 REMARK 3 T33: 0.2695 T12: -0.0659 REMARK 3 T13: 0.0121 T23: -0.0477 REMARK 3 L TENSOR REMARK 3 L11: 46.4874 L22: 26.7833 REMARK 3 L33: 27.4798 L12: 5.9665 REMARK 3 L13: 8.1226 L23: -8.7039 REMARK 3 S TENSOR REMARK 3 S11: -0.1147 S12: -0.7011 S13: 2.5141 REMARK 3 S21: 0.7071 S22: -0.8740 S23: -0.8674 REMARK 3 S31: -1.3966 S32: 2.0547 S33: 0.9887 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 692 D 696 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1155 16.2504 -1.9369 REMARK 3 T TENSOR REMARK 3 T11: 0.2724 T22: -0.2020 REMARK 3 T33: 0.4919 T12: -0.0773 REMARK 3 T13: 0.0461 T23: 0.1537 REMARK 3 L TENSOR REMARK 3 L11: 28.0708 L22: 24.9140 REMARK 3 L33: 45.8672 L12: -15.0661 REMARK 3 L13: 11.4386 L23: 20.1933 REMARK 3 S TENSOR REMARK 3 S11: -0.2272 S12: 2.6984 S13: 3.4301 REMARK 3 S21: -1.8883 S22: 0.3158 S23: -3.6220 REMARK 3 S31: -0.9522 S32: -0.8203 S33: -0.0886 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QH6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9734 REMARK 200 MONOCHROMATOR : BENT CYLINDRICAL GE(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BENT CONICAL SI-MIRROR (RH REMARK 200 COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13294 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : 0.11300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.54600 REMARK 200 R SYM FOR SHELL (I) : 0.54600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3ERD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.85900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 297 REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 PRO A 333 REMARK 465 THR A 334 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 LEU A 469 REMARK 465 GLU A 470 REMARK 465 GLU A 471 REMARK 465 VAL A 533 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 SER B 297 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 PRO B 333 REMARK 465 THR B 334 REMARK 465 ARG B 335 REMARK 465 PRO B 336 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LYS B 467 REMARK 465 SER B 468 REMARK 465 LEU B 469 REMARK 465 GLU B 470 REMARK 465 GLU B 471 REMARK 465 LYS B 472 REMARK 465 ARG B 548 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 LYS C 686 REMARK 465 SER C 697 REMARK 465 SER C 698 REMARK 465 LYS D 686 REMARK 465 SER D 697 REMARK 465 SER D 698 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 352 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 352 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 305 -157.61 -96.34 REMARK 500 LEU A 306 -30.22 -148.17 REMARK 500 ALA A 307 -75.82 -18.93 REMARK 500 LEU A 308 27.63 -58.78 REMARK 500 GLU A 397 32.94 -99.94 REMARK 500 ARG A 412 -52.62 -28.12 REMARK 500 ALA A 493 0.25 -66.35 REMARK 500 SER B 309 68.68 -105.89 REMARK 500 TYR B 331 141.86 -34.40 REMARK 500 THR B 371 -179.90 -64.01 REMARK 500 PRO B 399 134.23 -34.23 REMARK 500 LEU B 408 82.46 -154.13 REMARK 500 GLU B 419 128.00 -39.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 304 SER A 305 145.79 REMARK 500 LEU A 306 ALA A 307 143.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ODE A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ODE B 800 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QA6 RELATED DB: PDB REMARK 900 RELATED ID: 2QA8 RELATED DB: PDB REMARK 900 RELATED ID: 2QAB RELATED DB: PDB REMARK 900 RELATED ID: 2QGT RELATED DB: PDB REMARK 900 RELATED ID: 2QGW RELATED DB: PDB DBREF 2QH6 A 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 2QH6 B 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 2QH6 C 686 698 UNP Q8BN74 Q8BN74_MOUSE 686 698 DBREF 2QH6 D 686 698 UNP Q8BN74 Q8BN74_MOUSE 686 698 SEQADV 2QH6 SER A 297 UNP P03372 EXPRESSION TAG SEQADV 2QH6 SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 2QH6 SER B 297 UNP P03372 EXPRESSION TAG SEQADV 2QH6 SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 258 SER ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER SEQRES 2 A 258 LEU THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA SEQRES 3 A 258 GLU PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG SEQRES 4 A 258 PRO PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN SEQRES 5 A 258 LEU ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA SEQRES 6 A 258 LYS ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP SEQRES 7 A 258 GLN VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU SEQRES 8 A 258 MET ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY SEQRES 9 A 258 LYS LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN SEQRES 10 A 258 GLN GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP SEQRES 11 A 258 MET LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN SEQRES 12 A 258 LEU GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE SEQRES 13 A 258 LEU LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR SEQRES 14 A 258 LEU LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL SEQRES 15 A 258 LEU ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA SEQRES 16 A 258 LYS ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU SEQRES 17 A 258 ALA GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SEQRES 18 A 258 SER ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS SEQRES 19 A 258 LYS ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET SEQRES 20 A 258 LEU ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 B 258 SER ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER SEQRES 2 B 258 LEU THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA SEQRES 3 B 258 GLU PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG SEQRES 4 B 258 PRO PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN SEQRES 5 B 258 LEU ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA SEQRES 6 B 258 LYS ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP SEQRES 7 B 258 GLN VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU SEQRES 8 B 258 MET ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY SEQRES 9 B 258 LYS LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN SEQRES 10 B 258 GLN GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP SEQRES 11 B 258 MET LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN SEQRES 12 B 258 LEU GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE SEQRES 13 B 258 LEU LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR SEQRES 14 B 258 LEU LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL SEQRES 15 B 258 LEU ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA SEQRES 16 B 258 LYS ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU SEQRES 17 B 258 ALA GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SEQRES 18 B 258 SER ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS SEQRES 19 B 258 LYS ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET SEQRES 20 B 258 LEU ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 C 13 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 1 D 13 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER HET ODE A 700 31 HET ODE B 800 31 HETNAM ODE DIETHYL (1R,2S,3R,4S)-5,6-BIS(4-HYDROXYPHENYL)-7- HETNAM 2 ODE OXABICYCLO[2.2.1]HEPT-5-ENE-2,3-DICARBOXYLATE FORMUL 5 ODE 2(C24 H24 O7) FORMUL 7 HOH *3(H2 O) HELIX 1 1 LEU A 306 LEU A 310 5 5 HELIX 2 2 THR A 311 GLU A 323 1 13 HELIX 3 3 SER A 338 ARG A 363 1 26 HELIX 4 4 GLY A 366 LEU A 370 5 5 HELIX 5 5 THR A 371 SER A 395 1 25 HELIX 6 6 ASN A 413 VAL A 418 5 6 HELIX 7 7 GLY A 420 ASN A 439 1 20 HELIX 8 8 GLN A 441 GLY A 457 1 17 HELIX 9 9 VAL A 458 PHE A 461 5 4 HELIX 10 10 LYS A 472 ALA A 493 1 22 HELIX 11 11 THR A 496 ASN A 532 1 37 HELIX 12 12 SER A 537 ALA A 546 1 10 HELIX 13 13 THR B 311 GLU B 323 1 13 HELIX 14 14 SER B 338 VAL B 364 1 27 HELIX 15 15 THR B 371 MET B 396 1 26 HELIX 16 16 ASN B 413 VAL B 418 5 6 HELIX 17 17 GLY B 420 MET B 438 1 19 HELIX 18 18 GLN B 441 SER B 456 1 16 HELIX 19 19 ASP B 473 ALA B 493 1 21 HELIX 20 20 THR B 496 ASN B 532 1 37 HELIX 21 21 SER B 537 HIS B 547 1 11 HELIX 22 22 LYS C 688 ASP C 696 1 9 HELIX 23 23 LYS D 688 ASP D 696 1 9 SHEET 1 A 2 LYS A 401 ALA A 405 0 SHEET 2 A 2 LEU A 408 ASP A 411 -1 O LEU A 408 N ALA A 405 SHEET 1 B 2 LYS B 401 ALA B 405 0 SHEET 2 B 2 LEU B 408 ASP B 411 -1 O LEU B 408 N ALA B 405 CISPEP 1 SER A 305 LEU A 306 0 8.09 SITE 1 AC1 13 MET A 343 LEU A 346 THR A 347 GLU A 353 SITE 2 AC1 13 LEU A 384 ARG A 394 PHE A 404 MET A 421 SITE 3 AC1 13 PHE A 425 GLY A 521 HIS A 524 LEU A 525 SITE 4 AC1 13 LEU A 540 SITE 1 AC2 14 LEU B 346 THR B 347 GLU B 353 LEU B 384 SITE 2 AC2 14 MET B 388 ARG B 394 MET B 421 ILE B 424 SITE 3 AC2 14 PHE B 425 LEU B 428 HIS B 524 LEU B 525 SITE 4 AC2 14 LEU B 536 LEU B 540 CRYST1 55.765 81.718 58.310 90.00 109.90 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017932 0.000000 0.006492 0.00000 SCALE2 0.000000 0.012237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018239 0.00000