HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-JUL-07 2QNI TITLE CRYSTAL STRUCTURE OF UNCHARACTERIZED PROTEIN ATU0299 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN ATU0299; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AGR_C_517P; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS STR.; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58; SOURCE 5 ATCC: 33970; SOURCE 6 GENE: AGR_C_517, ATU0299; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) DERIVATIVE; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET DERIVATIVE KEYWDS MCSG, ATU0299, IN SITU PROTEOLYSIS, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, UNCHARACTERIZED PROTEIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,X.XU,J.GU,H.ZHENG,A.M.EDWARDS,A.JOACHIMIAK,A.SAVCHENKO,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 8 13-JUL-11 2QNI 1 VERSN REVDAT 7 17-MAR-09 2QNI 1 JRNL REVDAT 6 24-FEB-09 2QNI 1 VERSN REVDAT 5 22-JAN-08 2QNI 1 JRNL REVDAT 4 20-NOV-07 2QNI 1 JRNL REVDAT 3 21-AUG-07 2QNI 1 REMARK REVDAT 2 14-AUG-07 2QNI 1 KEYWDS REMARK REVDAT 1 07-AUG-07 2QNI 0 JRNL AUTH A.DONG,X.XU,J.GU,H.ZHENG,A.M.EDWARDS,A.JOACHIMIAK, JRNL AUTH 2 A.SAVCHENKO JRNL TITL CRYSTAL STRUCTURE OF UNCHARACTERIZED PROTEIN ATU0299. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29193 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 967 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2140 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1490 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 177 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : 0.32000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.16000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.099 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.034 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1527 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2067 ; 1.138 ; 1.925 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 190 ; 5.286 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;30.616 ;22.571 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 236 ;12.917 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;19.284 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 219 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1181 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 743 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1044 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 144 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 55 ; 0.215 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.234 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 991 ; 0.944 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1524 ; 1.379 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 622 ; 2.384 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 543 ; 3.501 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ARP/WARP 6.1.1 AND COOT 0.1 PROGRAMS WERE ALSO USED IN REMARK 3 REFINEMENT REMARK 4 REMARK 4 2QNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-07. REMARK 100 THE RCSB ID CODE IS RCSB043820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97600 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88206 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.74900 REMARK 200 R SYM FOR SHELL (I) : 0.74900 REMARK 200 FOR SHELL : 1.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DUE TO A NUMBER OF CIRCUMSTANCES, INITIAL DATA PROCESSING REMARK 200 WAS ONLY ACCOMPLISHED IN SPACE GROUP C2. SCALING STATISTICS IS REMARK 200 PROVIDED FOR THAT SPACE GROUP. USING THE PROGRAM XPREP, THE REMARK 200 HIGHER SYMMETRY (H32) WAS DETECTED AND USED IN REFINEMENT. THE REMARK 200 STRUCTURE FACTOR FILE CONTAINS BOTH DATA SETS: FOR H32 AND FOR C2 REMARK 200 SPACE GROUP ASSIGNMENTS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA(OAC) PH 4.6, 3.5M SODIUM REMARK 280 FORMATE. THE CRYSTAL WAS OBTAINED BY IN SITU PROTEOLYSIS, PROTEIN REMARK 280 SAMPLE WAS MIXED WITH 1:100 WEIGHT TO WEIGHT RATIO WITH REMARK 280 CHYMOTRYPSIN IMMEDIATELY PRIOR TO SETTING UP CRYSTALLIZATION, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 55.67350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.14311 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 45.34000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 55.67350 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.14311 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 45.34000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 55.67350 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.14311 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 45.34000 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 55.67350 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.14311 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 45.34000 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 55.67350 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.14311 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 45.34000 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 55.67350 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.14311 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 45.34000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 64.28622 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 90.68000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 64.28622 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 90.68000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 64.28622 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 90.68000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 64.28622 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 90.68000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 64.28622 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 90.68000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 64.28622 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 90.68000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION REMARK 300 ON BURIED SURFACE AREA. REMARK 300 AUTHORS STATE THAT THE BIOLOGICAL UNIT INFORMATION REMARK 300 OF THIS PROTEIN IS NOT AVAILABLE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2370 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -55.67350 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 32.14311 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 45.34000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 ARG A 14 REMARK 465 GLU A 15 REMARK 465 ASN A 16 REMARK 465 LEU A 17 REMARK 465 TYR A 18 REMARK 465 PHE A 19 REMARK 465 GLN A 20 REMARK 465 LYS A 183 REMARK 465 ASP A 184 REMARK 465 LEU A 202 REMARK 465 SER A 206 REMARK 465 PRO A 207 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 199 OE1 OE2 REMARK 470 SER A 201 OG REMARK 470 GLN A 218 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 377 O HOH A 387 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 30 -157.93 -85.91 REMARK 500 ASN A 100 123.76 -34.02 REMARK 500 ARG A 102 34.38 -145.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 306 DISTANCE = 5.16 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5852 RELATED DB: TARGETDB DBREF 2QNI A 22 219 UNP Q8UIJ6 Q8UIJ6_AGRT5 1 198 SEQADV 2QNI MSE A 1 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI GLY A 2 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI SER A 3 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI SER A 4 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI HIS A 5 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI HIS A 6 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI HIS A 7 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI HIS A 8 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI HIS A 9 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI HIS A 10 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI SER A 11 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI SER A 12 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI GLY A 13 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI ARG A 14 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI GLU A 15 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI ASN A 16 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI LEU A 17 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI TYR A 18 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI PHE A 19 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI GLN A 20 UNP Q8UIJ6 EXPRESSION TAG SEQADV 2QNI GLY A 21 UNP Q8UIJ6 EXPRESSION TAG SEQRES 1 A 219 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 219 ARG GLU ASN LEU TYR PHE GLN GLY MSE HIS ALA LEU TYR SEQRES 3 A 219 ILE THR HIS PRO GLN VAL LYS ILE ASP PRO ALA VAL PRO SEQRES 4 A 219 VAL PRO GLU TRP GLY LEU SER GLU ARG GLY ALA GLU ARG SEQRES 5 A 219 ALA ARG GLU ALA SER ARG LEU PRO TRP ALA LYS ALA LEU SEQRES 6 A 219 ARG ARG ILE VAL SER SER ALA GLU THR LYS ALA ILE GLU SEQRES 7 A 219 THR ALA HIS MSE LEU ALA GLU THR SER GLY ALA ALA ILE SEQRES 8 A 219 GLU ILE ILE GLU ALA MSE HIS GLU ASN ASP ARG SER ALA SEQRES 9 A 219 THR GLY PHE LEU PRO PRO PRO GLU PHE GLU LYS ALA ALA SEQRES 10 A 219 ASP TRP PHE PHE ALA HIS PRO GLU GLU SER PHE GLN GLY SEQRES 11 A 219 TRP GLU ARG ALA ILE ASP ALA GLN ALA ARG ILE VAL GLU SEQRES 12 A 219 ALA VAL LYS ALA VAL LEU ASP ARG HIS ASP ALA ARG GLN SEQRES 13 A 219 PRO ILE ALA PHE VAL GLY HIS GLY GLY VAL GLY THR LEU SEQRES 14 A 219 LEU LYS CYS HIS ILE GLU GLY ARG GLY ILE SER ARG SER SEQRES 15 A 219 LYS ASP GLN PRO ALA GLY GLY GLY ASN LEU PHE ARG PHE SEQRES 16 A 219 SER ILE ALA GLU PHE SER LEU ALA ALA ALA SER PRO THR SEQRES 17 A 219 CYS ASP TRP THR ALA MSE GLU THR TRP GLN GLY MODRES 2QNI MSE A 22 MET SELENOMETHIONINE MODRES 2QNI MSE A 82 MET SELENOMETHIONINE MODRES 2QNI MSE A 97 MET SELENOMETHIONINE MODRES 2QNI MSE A 214 MET SELENOMETHIONINE HET MSE A 22 8 HET MSE A 82 8 HET MSE A 97 8 HET MSE A 214 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 HOH *177(H2 O) HELIX 1 1 PRO A 39 TRP A 43 5 5 HELIX 2 2 SER A 46 ARG A 58 1 13 HELIX 3 3 LEU A 59 ALA A 64 1 6 HELIX 4 4 GLU A 73 ALA A 84 1 12 HELIX 5 5 GLU A 95 HIS A 98 5 4 HELIX 6 6 ARG A 102 GLY A 106 5 5 HELIX 7 7 PRO A 109 HIS A 123 1 15 HELIX 8 8 ARG A 133 ARG A 151 1 19 HELIX 9 9 HIS A 163 GLY A 176 1 14 HELIX 10 10 ILE A 197 SER A 201 1 5 HELIX 11 11 GLU A 215 TRP A 217 5 3 SHEET 1 A 6 ALA A 90 ILE A 93 0 SHEET 2 A 6 ARG A 67 SER A 70 1 N ILE A 68 O ALA A 90 SHEET 3 A 6 ILE A 158 GLY A 162 1 O ALA A 159 N VAL A 69 SHEET 4 A 6 HIS A 23 THR A 28 1 N LEU A 25 O PHE A 160 SHEET 5 A 6 ASN A 191 SER A 196 -1 O ASN A 191 N THR A 28 SHEET 6 A 6 THR A 212 ALA A 213 -1 O THR A 212 N LEU A 192 LINK C GLY A 21 N MSE A 22 1555 1555 1.34 LINK C MSE A 22 N HIS A 23 1555 1555 1.33 LINK C HIS A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N LEU A 83 1555 1555 1.33 LINK C ALA A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N HIS A 98 1555 1555 1.33 LINK C ALA A 213 N MSE A 214 1555 1555 1.33 LINK C MSE A 214 N GLU A 215 1555 1555 1.33 CRYST1 111.347 111.347 136.020 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008981 0.005185 0.000000 0.00000 SCALE2 0.000000 0.010370 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007352 0.00000