HEADER TRANSFERASE 19-JUL-07 2QNY TITLE CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE A246F MUTANT OF TITLE 2 MYCOBACTERIUM BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III (FABH) TITLE 3 AND SS-(2-HYDROXYETHYL) O-DECYL ESTER CARBONO(DITHIOPEROXOIC) ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-OXOACYL- [ACYL-CARRIER-PROTEIN] SYNTHASE III, BETA- COMPND 5 KETOACYL-ACP SYNTHASE III, KAS III, MTFABH; COMPND 6 EC: 2.3.1.41; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: FABH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS FATTY ACID BIOSYNTHESIS, MYOBACTERIUM TUBERCULOSIS, STRUCTURAL BASIS KEYWDS 2 FOR SUBSTRATE SPECIFICITY, ENZYME INHIBITOR COMPLEX, MECHANISM BASED KEYWDS 3 INHIBITOR, ACYLTRANSFERASE, LIPID SYNTHESIS, MULTIFUNCTIONAL ENZYME, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SACHDEVA,F.MUSAYEV,M.ALHAMADSHEH,J.N.SCARSDALE,H.T.WRIGHT, AUTHOR 2 K.A.REYNOLDS REVDAT 7 30-AUG-23 2QNY 1 REMARK REVDAT 6 20-OCT-21 2QNY 1 REMARK SEQADV LINK REVDAT 5 24-JUL-19 2QNY 1 REMARK LINK REVDAT 4 25-OCT-17 2QNY 1 REMARK REVDAT 3 13-JUL-11 2QNY 1 VERSN REVDAT 2 24-FEB-09 2QNY 1 VERSN REVDAT 1 06-MAY-08 2QNY 0 JRNL AUTH S.SACHDEVA,F.N.MUSAYEV,M.M.ALHAMADSHEH,J.N.SCARSDALE, JRNL AUTH 2 H.T.WRIGHT,K.A.REYNOLDS JRNL TITL SEPARATE ENTRANCE AND EXIT PORTALS FOR LIGAND TRAFFIC IN JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS FABH JRNL REF CHEM.BIOL. V. 15 402 2008 JRNL REFN ISSN 1074-5521 JRNL PMID 18420147 JRNL DOI 10.1016/J.CHEMBIOL.2008.03.007 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.N.SCARSDALE,G.KAZANINA,X.HE,K.A.REYNOLDS,H.T.WRIGHT REMARK 1 TITL CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS REMARK 1 TITL 2 BETA-KETOACYL-ACY; CARRIER PROTEIN SYNTHASE III REMARK 1 REF J.BIOL.CHEM. V. 276 20516 2001 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 11278743 REMARK 1 DOI 10.1074/JBC.M010762200 REMARK 1 REFERENCE 2 REMARK 1 AUTH F.MUSAYEV,S.SACHDEVA,J.N.SCARSDALE,K.A.REYNOLDS,H.T.WRIGHT REMARK 1 TITL CRYSTAL STRUCTURE OF A SUBSTRATE COMPLEX OF MYCOBACTERIUM REMARK 1 TITL 2 TUBERCULOSIS BETA-KETOACYL-ACYL CARRIER PROTEIN SYTHNASE III REMARK 1 TITL 3 (FABH) WITH LAUROYL-COENZYME A. REMARK 1 REF J.MOL.BIOL. V. 346 1313 2005 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 15713483 REMARK 1 DOI 10.1016/J.JMB.2004.12.044 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 34734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3445 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1625 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4783 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 443 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 32.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.98000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.332 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.233 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.888 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5026 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6838 ; 1.075 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 671 ; 5.944 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 198 ;37.031 ;23.535 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 726 ;14.469 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;16.926 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 781 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3849 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2636 ; 0.180 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3487 ; 0.296 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 498 ; 0.106 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 51 ; 0.131 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.126 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3403 ; 0.281 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5292 ; 0.457 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1809 ; 0.712 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1544 ; 1.165 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 317 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1797 27.2968 36.9841 REMARK 3 T TENSOR REMARK 3 T11: -.1095 T22: -.0831 REMARK 3 T33: -.0867 T12: -.0202 REMARK 3 T13: -.0119 T23: .0068 REMARK 3 L TENSOR REMARK 3 L11: .6243 L22: 1.1523 REMARK 3 L33: .8030 L12: -.0560 REMARK 3 L13: .1323 L23: -.2588 REMARK 3 S TENSOR REMARK 3 S11: -.0285 S12: -.0261 S13: -.0060 REMARK 3 S21: .0778 S22: -.0020 S23: -.0769 REMARK 3 S31: -.0164 S32: .1086 S33: .0305 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 317 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9450 42.3085 20.8214 REMARK 3 T TENSOR REMARK 3 T11: -.0564 T22: -.0899 REMARK 3 T33: -.0684 T12: -.0087 REMARK 3 T13: -.0206 T23: .0069 REMARK 3 L TENSOR REMARK 3 L11: 1.1670 L22: .4658 REMARK 3 L33: 1.0560 L12: -.2438 REMARK 3 L13: .3342 L23: -.1111 REMARK 3 S TENSOR REMARK 3 S11: -.0264 S12: .0713 S13: .0727 REMARK 3 S21: -.0467 S22: .0163 S23: .0514 REMARK 3 S31: -.0809 S32: -.0840 S33: .0101 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFMAC AND CNS WERE USED FOR REMARK 3 REFINEMENT. REMARK 4 REMARK 4 2QNY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000043836. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX OPTICS REMARK 200 OPTICS : RIGAKU VARIMAX CONFOCAL OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35143 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 39.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 3.170 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.6 REMARK 200 DATA REDUNDANCY IN SHELL : 1.91 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.15000 REMARK 200 FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE, CNS REMARK 200 STARTING MODEL: PDB ENTRY 1HZP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA HEPES, 1M K/NA TARTRATE, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 114.95150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 114.95150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.85200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.34450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.85200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.34450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 114.95150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.85200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.34450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 114.95150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.85200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.34450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6740 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 HIS A 25 REMARK 465 ILE A 26 REMARK 465 ASP A 27 REMARK 465 GLY A 318 REMARK 465 GLN B 24 REMARK 465 HIS B 25 REMARK 465 ILE B 26 REMARK 465 ASP B 27 REMARK 465 SER B 28 REMARK 465 GLY B 318 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A -9 OG1 CG2 REMARK 470 SER A 28 OG REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 ARG A 151 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 GLU B 31 CG CD OE1 OE2 REMARK 470 ARG B 151 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 187 CG OD1 OD2 REMARK 470 LYS B 256 CG CD CE NZ REMARK 470 LYS B 294 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 110 42.61 -155.22 REMARK 500 CYS A 112 30.00 -97.28 REMARK 500 ASN A 153 -8.61 -145.73 REMARK 500 SER A 276 -116.63 45.53 REMARK 500 SER A 276 -117.03 46.60 REMARK 500 LEU A 308 92.46 40.55 REMARK 500 PHE B 84 36.83 -89.92 REMARK 500 ALA B 110 40.80 -153.15 REMARK 500 ASN B 153 -8.40 -141.44 REMARK 500 SER B 276 -115.83 43.04 REMARK 500 LEU B 308 91.75 47.51 REMARK 500 LEU B 308 93.34 47.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 307 LEU A 308 -137.05 REMARK 500 GLY B 307 LEU B 308 -142.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DFD A 760 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 962 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 963 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DFD B 760 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 962 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U6S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN MYCOBACTERIUM TUBERCULOSIS REMARK 900 BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III AND LAUROYL REMARK 900 COENZYME A REMARK 900 RELATED ID: 1HZP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS BETA- KETOACYL- REMARK 900 ACYL CARRIER PROTEIN SYNTHASE III REMARK 900 RELATED ID: 1U6E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE C112A MUTANT OF MYCOBACTERIUM TUBERCULOSIS REMARK 900 BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III REMARK 900 RELATED ID: 1HNJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E. COLI FABH + MALONYL COA REMARK 900 RELATED ID: 1HNK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E. COLI BETA-KETO ACP SYNTHASE III, TETRAGONAL REMARK 900 FORM. REMARK 900 RELATED ID: 2QNX RELATED DB: PDB REMARK 900 RELATED ID: 2QNZ RELATED DB: PDB REMARK 900 RELATED ID: 2QO0 RELATED DB: PDB REMARK 900 RELATED ID: 2QO1 RELATED DB: PDB DBREF 2QNY A -10 318 UNP P0A574 FABH_MYCTU 1 335 DBREF 2QNY B -10 318 UNP P0A574 FABH_MYCTU 1 335 SEQADV 2QNY PHE A 246 UNP P0A574 ALA 260 ENGINEERED MUTATION SEQADV 2QNY PHE B 246 UNP P0A574 ALA 260 ENGINEERED MUTATION SEQRES 1 A 335 MET THR GLU ILE ALA THR THR SER GLY ALA ARG SER VAL SEQRES 2 A 335 GLY LEU LEU SER VAL GLY ALA TYR ARG PRO GLU ARG VAL SEQRES 3 A 335 VAL THR ASN ASP GLU ILE CYS GLN HIS ILE ASP SER SER SEQRES 4 A 335 ASP GLU TRP ILE TYR THR ARG THR GLY ILE LYS THR ARG SEQRES 5 A 335 ARG PHE ALA ALA ASP ASP GLU SER ALA ALA SER MET ALA SEQRES 6 A 335 THR GLU ALA CYS ARG ARG ALA LEU SER ASN ALA GLY LEU SEQRES 7 A 335 SER ALA ALA ASP ILE ASP GLY VAL ILE VAL THR THR ASN SEQRES 8 A 335 THR HIS PHE LEU GLN THR PRO PRO ALA ALA PRO MET VAL SEQRES 9 A 335 ALA ALA SER LEU GLY ALA LYS GLY ILE LEU GLY PHE ASP SEQRES 10 A 335 LEU SER ALA GLY CYS ALA GLY PHE GLY TYR ALA LEU GLY SEQRES 11 A 335 ALA ALA ALA ASP MET ILE ARG GLY GLY GLY ALA ALA THR SEQRES 12 A 335 MET LEU VAL VAL GLY THR GLU LYS LEU SER PRO THR ILE SEQRES 13 A 335 ASP MET TYR ASP ARG GLY ASN CYS PHE ILE PHE ALA ASP SEQRES 14 A 335 GLY ALA ALA ALA VAL VAL VAL GLY GLU THR PRO PHE GLN SEQRES 15 A 335 GLY ILE GLY PRO THR VAL ALA GLY SER ASP GLY GLU GLN SEQRES 16 A 335 ALA ASP ALA ILE ARG GLN ASP ILE ASP TRP ILE THR PHE SEQRES 17 A 335 ALA GLN ASN PRO SER GLY PRO ARG PRO PHE VAL ARG LEU SEQRES 18 A 335 GLU GLY PRO ALA VAL PHE ARG TRP ALA ALA PHE LYS MET SEQRES 19 A 335 GLY ASP VAL GLY ARG ARG ALA MET ASP ALA ALA GLY VAL SEQRES 20 A 335 ARG PRO ASP GLN ILE ASP VAL PHE VAL PRO HIS GLN PHE SEQRES 21 A 335 ASN SER ARG ILE ASN GLU LEU LEU VAL LYS ASN LEU GLN SEQRES 22 A 335 LEU ARG PRO ASP ALA VAL VAL ALA ASN ASP ILE GLU HIS SEQRES 23 A 335 THR GLY ASN THR SER ALA ALA SER ILE PRO LEU ALA MET SEQRES 24 A 335 ALA GLU LEU LEU THR THR GLY ALA ALA LYS PRO GLY ASP SEQRES 25 A 335 LEU ALA LEU LEU ILE GLY TYR GLY ALA GLY LEU SER TYR SEQRES 26 A 335 ALA ALA GLN VAL VAL ARG MET PRO LYS GLY SEQRES 1 B 335 MET THR GLU ILE ALA THR THR SER GLY ALA ARG SER VAL SEQRES 2 B 335 GLY LEU LEU SER VAL GLY ALA TYR ARG PRO GLU ARG VAL SEQRES 3 B 335 VAL THR ASN ASP GLU ILE CYS GLN HIS ILE ASP SER SER SEQRES 4 B 335 ASP GLU TRP ILE TYR THR ARG THR GLY ILE LYS THR ARG SEQRES 5 B 335 ARG PHE ALA ALA ASP ASP GLU SER ALA ALA SER MET ALA SEQRES 6 B 335 THR GLU ALA CYS ARG ARG ALA LEU SER ASN ALA GLY LEU SEQRES 7 B 335 SER ALA ALA ASP ILE ASP GLY VAL ILE VAL THR THR ASN SEQRES 8 B 335 THR HIS PHE LEU GLN THR PRO PRO ALA ALA PRO MET VAL SEQRES 9 B 335 ALA ALA SER LEU GLY ALA LYS GLY ILE LEU GLY PHE ASP SEQRES 10 B 335 LEU SER ALA GLY CYS ALA GLY PHE GLY TYR ALA LEU GLY SEQRES 11 B 335 ALA ALA ALA ASP MET ILE ARG GLY GLY GLY ALA ALA THR SEQRES 12 B 335 MET LEU VAL VAL GLY THR GLU LYS LEU SER PRO THR ILE SEQRES 13 B 335 ASP MET TYR ASP ARG GLY ASN CYS PHE ILE PHE ALA ASP SEQRES 14 B 335 GLY ALA ALA ALA VAL VAL VAL GLY GLU THR PRO PHE GLN SEQRES 15 B 335 GLY ILE GLY PRO THR VAL ALA GLY SER ASP GLY GLU GLN SEQRES 16 B 335 ALA ASP ALA ILE ARG GLN ASP ILE ASP TRP ILE THR PHE SEQRES 17 B 335 ALA GLN ASN PRO SER GLY PRO ARG PRO PHE VAL ARG LEU SEQRES 18 B 335 GLU GLY PRO ALA VAL PHE ARG TRP ALA ALA PHE LYS MET SEQRES 19 B 335 GLY ASP VAL GLY ARG ARG ALA MET ASP ALA ALA GLY VAL SEQRES 20 B 335 ARG PRO ASP GLN ILE ASP VAL PHE VAL PRO HIS GLN PHE SEQRES 21 B 335 ASN SER ARG ILE ASN GLU LEU LEU VAL LYS ASN LEU GLN SEQRES 22 B 335 LEU ARG PRO ASP ALA VAL VAL ALA ASN ASP ILE GLU HIS SEQRES 23 B 335 THR GLY ASN THR SER ALA ALA SER ILE PRO LEU ALA MET SEQRES 24 B 335 ALA GLU LEU LEU THR THR GLY ALA ALA LYS PRO GLY ASP SEQRES 25 B 335 LEU ALA LEU LEU ILE GLY TYR GLY ALA GLY LEU SER TYR SEQRES 26 B 335 ALA ALA GLN VAL VAL ARG MET PRO LYS GLY HET DFD A 760 26 HET BME A 962 4 HET BME A 963 4 HET DFD B 760 26 HET BME B 962 4 HETNAM DFD DECYL FORMATE HETNAM BME BETA-MERCAPTOETHANOL FORMUL 3 DFD 2(C11 H22 O2) FORMUL 4 BME 3(C2 H6 O S) FORMUL 8 HOH *443(H2 O) HELIX 1 1 ASN A 19 CYS A 23 1 5 HELIX 2 2 SER A 28 GLY A 38 1 11 HELIX 3 3 SER A 50 GLY A 67 1 18 HELIX 4 4 SER A 69 ILE A 73 5 5 HELIX 5 5 PRO A 89 LEU A 98 1 10 HELIX 6 6 ALA A 110 CYS A 112 5 3 HELIX 7 7 ALA A 113 GLY A 128 1 16 HELIX 8 8 SER A 143 ILE A 146 5 4 HELIX 9 9 GLY A 183 ASP A 187 5 5 HELIX 10 10 ASP A 194 ASN A 201 1 8 HELIX 11 11 GLU A 208 GLY A 232 1 25 HELIX 12 12 ARG A 234 ILE A 238 5 5 HELIX 13 13 ASN A 247 LEU A 258 1 12 HELIX 14 14 ASP A 268 GLY A 273 1 6 HELIX 15 15 THR A 275 ALA A 277 5 3 HELIX 16 16 ALA A 278 THR A 290 1 13 HELIX 17 17 ASN B 19 CYS B 23 1 5 HELIX 18 18 SER B 29 GLY B 38 1 10 HELIX 19 19 SER B 50 GLY B 67 1 18 HELIX 20 20 SER B 69 ILE B 73 5 5 HELIX 21 21 PRO B 89 LEU B 98 1 10 HELIX 22 22 ALA B 110 CYS B 112 5 3 HELIX 23 23 ALA B 113 GLY B 128 1 16 HELIX 24 24 LEU B 142 ILE B 146 5 5 HELIX 25 25 GLY B 183 ASP B 187 5 5 HELIX 26 26 ASP B 194 ASN B 201 1 8 HELIX 27 27 GLU B 208 ALA B 231 1 24 HELIX 28 28 ARG B 234 ILE B 238 5 5 HELIX 29 29 ASN B 247 GLN B 259 1 13 HELIX 30 30 ASP B 268 GLY B 273 1 6 HELIX 31 31 THR B 275 ALA B 277 5 3 HELIX 32 32 ALA B 278 GLY B 291 1 14 SHEET 1 A10 VAL A 3 TYR A 11 0 SHEET 2 A10 ASP A 159 GLU A 168 -1 O ALA A 161 N TYR A 11 SHEET 3 A10 MET A 134 LYS A 141 -1 N MET A 134 O VAL A 166 SHEET 4 A10 GLY A 75 THR A 79 1 N THR A 79 O VAL A 137 SHEET 5 A10 LEU A 104 SER A 109 1 O LEU A 108 N VAL A 78 SHEET 6 A10 LEU B 104 SER B 109 -1 O ASP B 107 N SER A 109 SHEET 7 A10 GLY B 75 THR B 79 1 N VAL B 78 O LEU B 108 SHEET 8 A10 THR B 133 GLU B 140 1 O VAL B 137 N THR B 79 SHEET 9 A10 GLY B 160 GLU B 168 -1 O VAL B 166 N MET B 134 SHEET 10 A10 VAL B 3 TYR B 11 -1 N TYR B 11 O ALA B 161 SHEET 1 B 2 ARG A 15 THR A 18 0 SHEET 2 B 2 THR A 41 PHE A 44 -1 O ARG A 42 N VAL A 17 SHEET 1 C 5 VAL A 178 SER A 181 0 SHEET 2 C 5 SER A 309 ARG A 316 -1 O ALA A 312 N VAL A 178 SHEET 3 C 5 LEU A 298 GLY A 305 -1 N ALA A 299 O VAL A 315 SHEET 4 C 5 VAL A 240 PRO A 243 1 N VAL A 242 O LEU A 300 SHEET 5 C 5 VAL A 264 VAL A 265 1 O VAL A 264 N PHE A 241 SHEET 1 D 2 ILE A 189 GLN A 191 0 SHEET 2 D 2 VAL A 205 LEU A 207 -1 O ARG A 206 N ARG A 190 SHEET 1 E 2 ARG B 15 THR B 18 0 SHEET 2 E 2 THR B 41 PHE B 44 -1 O ARG B 42 N VAL B 17 SHEET 1 F 5 VAL B 178 SER B 181 0 SHEET 2 F 5 SER B 309 ARG B 316 -1 O ALA B 312 N VAL B 178 SHEET 3 F 5 LEU B 298 GLY B 305 -1 N ALA B 299 O VAL B 315 SHEET 4 F 5 VAL B 240 PRO B 243 1 N VAL B 242 O LEU B 300 SHEET 5 F 5 VAL B 264 VAL B 265 1 O VAL B 264 N PHE B 241 SHEET 1 G 2 ILE B 189 GLN B 191 0 SHEET 2 G 2 VAL B 205 LEU B 207 -1 O ARG B 206 N ARG B 190 LINK SG CYS A 23 S2 BME A 962 1555 1555 2.00 LINK SG BCYS A 112 C1 BDFD A 760 1555 1555 1.83 LINK SG ACYS A 112 C1 ADFD A 760 1555 1555 1.83 LINK SG CYS A 154 S2 BME A 963 1555 1555 1.99 LINK SG CYS B 23 S2 BME B 962 1555 1555 2.00 LINK SG BCYS B 112 C1 BDFD B 760 1555 1555 1.82 LINK SG ACYS B 112 C1 ADFD B 760 1555 1555 1.83 CISPEP 1 THR A 87 PRO A 88 0 -0.42 CISPEP 2 THR B 87 PRO B 88 0 -3.57 SITE 1 AC1 16 ASN A 81 GLY A 111 CYS A 112 LEU A 142 SITE 2 AC1 16 THR A 145 ILE A 189 GLN A 191 PHE A 204 SITE 3 AC1 16 HIS A 244 PHE A 246 ASN A 274 SER A 276 SITE 4 AC1 16 GLY A 305 ALA A 306 GLN B 86 THR B 87 SITE 1 AC2 4 CYS A 23 TRP A 32 ARG A 151 PHE A 155 SITE 1 AC3 3 ILE A 22 MET A 148 CYS A 154 SITE 1 AC4 11 GLN A 86 THR A 87 CYS B 112 LEU B 142 SITE 2 AC4 11 ILE B 189 GLN B 191 PHE B 204 PHE B 246 SITE 3 AC4 11 SER B 276 GLY B 305 ALA B 306 SITE 1 AC5 4 CYS B 23 TRP B 32 ARG B 151 PHE B 155 CRYST1 67.704 88.689 229.903 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014770 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011275 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004350 0.00000