HEADER TRANSFERASE 27-JUL-07 2QR1 TITLE CRYSTAL STRUCTURE OF THE ADENYLATE SENSOR FROM AMP-ACTIVATED PROTEIN TITLE 2 KINASE IN COMPLEX WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SNF1-LIKE PROTEIN KINASE SSP2; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: C-TERMINAL RESIDUES:440-576; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SPCC1919.03C PROTEIN; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: C-TERMINAL RESIDUES:203-298; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: PROTEIN C1556.08C; COMPND 14 CHAIN: G, E; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 4896; SOURCE 5 GENE: SSP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSMT3; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 13 ORGANISM_COMMON: FISSION YEAST; SOURCE 14 ORGANISM_TAXID: 4896; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET-DUET-1; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 22 ORGANISM_COMMON: FISSION YEAST; SOURCE 23 ORGANISM_TAXID: 4896; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 25 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 26 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PET-DUET-1 KEYWDS AMPK, ADP, ATP-BINDING, KINASE, NUCLEOTIDE-BINDING, SERINE/THREONINE- KEYWDS 2 PROTEIN KINASE, TRANSFERASE, CBS DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR X.JIN,R.TOWNLEY,L.SHAPIRO REVDAT 4 30-AUG-23 2QR1 1 REMARK SEQADV REVDAT 3 13-JUL-11 2QR1 1 VERSN REVDAT 2 24-FEB-09 2QR1 1 VERSN REVDAT 1 23-OCT-07 2QR1 0 JRNL AUTH X.JIN,R.TOWNLEY,L.SHAPIRO JRNL TITL STRUCTURAL INSIGHT INTO AMPK REGULATION: ADP COMES INTO JRNL TITL 2 PLAY. JRNL REF STRUCTURE V. 15 1285 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17937917 JRNL DOI 10.1016/J.STR.2007.07.017 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 28869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1558 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1637 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.3960 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.4880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8349 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 79 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.70000 REMARK 3 B22 (A**2) : -0.57000 REMARK 3 B33 (A**2) : 0.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.58000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.435 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.335 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.343 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8638 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11732 ; 1.609 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1050 ; 7.039 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 362 ;37.552 ;23.867 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1504 ;20.538 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;18.171 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1357 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6359 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3978 ; 0.239 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5939 ; 0.321 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 319 ; 0.184 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.115 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5403 ; 0.526 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8579 ; 0.928 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3639 ; 1.322 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3152 ; 2.139 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 451 A 543 4 REMARK 3 1 C 451 C 541 4 REMARK 3 2 A 557 A 576 4 REMARK 3 2 C 557 C 576 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 848 ; 0.51 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 848 ; 0.53 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : B D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 207 B 246 4 REMARK 3 1 D 207 D 246 4 REMARK 3 2 B 250 B 297 4 REMARK 3 2 D 250 D 297 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 B (A): 681 ; 0.59 ; 0.50 REMARK 3 MEDIUM THERMAL 2 B (A**2): 681 ; 0.46 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : G E REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 G 2 G 315 4 REMARK 3 1 E 3 E 315 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 G (A): 2450 ; 0.39 ; 0.50 REMARK 3 MEDIUM THERMAL 3 G (A**2): 2450 ; 0.50 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 451 A 576 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5450 22.4320 9.4220 REMARK 3 T TENSOR REMARK 3 T11: -0.2081 T22: -0.0603 REMARK 3 T33: -0.1954 T12: -0.0115 REMARK 3 T13: -0.0686 T23: 0.1242 REMARK 3 L TENSOR REMARK 3 L11: 5.0315 L22: 3.7535 REMARK 3 L33: 5.5771 L12: 0.4466 REMARK 3 L13: 1.7513 L23: 0.1922 REMARK 3 S TENSOR REMARK 3 S11: -0.1050 S12: 0.4303 S13: 0.4661 REMARK 3 S21: -0.0912 S22: 0.0886 S23: 0.0475 REMARK 3 S31: -0.3192 S32: -0.0004 S33: 0.0164 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 207 B 247 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8240 29.7930 15.6610 REMARK 3 T TENSOR REMARK 3 T11: -0.1422 T22: -0.0017 REMARK 3 T33: 0.1426 T12: 0.1931 REMARK 3 T13: -0.0666 T23: -0.0795 REMARK 3 L TENSOR REMARK 3 L11: 6.0785 L22: 6.5177 REMARK 3 L33: 6.9295 L12: 1.1601 REMARK 3 L13: 0.7703 L23: -1.6555 REMARK 3 S TENSOR REMARK 3 S11: 0.0499 S12: -0.1734 S13: 1.2885 REMARK 3 S21: 0.1990 S22: -0.1438 S23: 0.8139 REMARK 3 S31: -0.7987 S32: 0.5961 S33: 0.0939 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 248 B 297 REMARK 3 ORIGIN FOR THE GROUP (A): -11.9370 8.8320 22.0400 REMARK 3 T TENSOR REMARK 3 T11: -0.1954 T22: -0.0847 REMARK 3 T33: -0.3593 T12: 0.0022 REMARK 3 T13: -0.0202 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 5.9163 L22: 8.0127 REMARK 3 L33: 2.0951 L12: 1.0767 REMARK 3 L13: 0.6938 L23: -0.2897 REMARK 3 S TENSOR REMARK 3 S11: 0.1454 S12: -0.1271 S13: 0.0275 REMARK 3 S21: 0.5377 S22: -0.0303 S23: 0.1432 REMARK 3 S31: -0.2999 S32: -0.3401 S33: -0.1152 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 450 C 576 REMARK 3 ORIGIN FOR THE GROUP (A): 37.4190 -5.8120 12.4220 REMARK 3 T TENSOR REMARK 3 T11: -0.1992 T22: 0.1337 REMARK 3 T33: -0.2046 T12: 0.0496 REMARK 3 T13: 0.0177 T23: -0.1557 REMARK 3 L TENSOR REMARK 3 L11: 4.7415 L22: 6.3429 REMARK 3 L33: 4.0433 L12: 0.3066 REMARK 3 L13: -0.3263 L23: 1.0672 REMARK 3 S TENSOR REMARK 3 S11: -0.0853 S12: 0.5622 S13: -0.3720 REMARK 3 S21: -0.5963 S22: 0.3838 S23: -0.3237 REMARK 3 S31: 0.2406 S32: 0.5711 S33: -0.2985 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 207 D 247 REMARK 3 ORIGIN FOR THE GROUP (A): 38.4110 -11.7110 18.9810 REMARK 3 T TENSOR REMARK 3 T11: -0.2691 T22: 0.1302 REMARK 3 T33: 0.1971 T12: 0.0991 REMARK 3 T13: -0.0294 T23: -0.1078 REMARK 3 L TENSOR REMARK 3 L11: 2.5301 L22: 8.8601 REMARK 3 L33: 10.8738 L12: -0.5497 REMARK 3 L13: 0.8274 L23: 3.6713 REMARK 3 S TENSOR REMARK 3 S11: 0.1953 S12: 0.3652 S13: -0.5095 REMARK 3 S21: 0.7797 S22: 0.0568 S23: 0.1874 REMARK 3 S31: 1.4922 S32: 0.1874 S33: -0.2521 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 248 D 297 REMARK 3 ORIGIN FOR THE GROUP (A): 37.0310 8.1120 23.9000 REMARK 3 T TENSOR REMARK 3 T11: -0.1855 T22: -0.0628 REMARK 3 T33: -0.3780 T12: -0.0458 REMARK 3 T13: 0.0179 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 10.1071 L22: 9.1926 REMARK 3 L33: 1.8717 L12: 2.6682 REMARK 3 L13: 1.0801 L23: 0.5968 REMARK 3 S TENSOR REMARK 3 S11: 0.1495 S12: 0.2876 S13: -0.4358 REMARK 3 S21: 0.2952 S22: 0.0834 S23: -0.2885 REMARK 3 S31: 0.2570 S32: 0.5142 S33: -0.2329 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 172 REMARK 3 ORIGIN FOR THE GROUP (A): -5.0680 -8.7200 19.2030 REMARK 3 T TENSOR REMARK 3 T11: -0.1600 T22: -0.0688 REMARK 3 T33: -0.1705 T12: -0.0468 REMARK 3 T13: -0.0132 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 3.6965 L22: 1.7789 REMARK 3 L33: 0.6161 L12: 0.3537 REMARK 3 L13: 0.2635 L23: -0.5564 REMARK 3 S TENSOR REMARK 3 S11: -0.0467 S12: 0.3378 S13: -0.3993 REMARK 3 S21: -0.1905 S22: -0.0064 S23: -0.0470 REMARK 3 S31: 0.2660 S32: -0.0593 S33: 0.0531 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 173 G 317 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6950 -19.2530 35.4400 REMARK 3 T TENSOR REMARK 3 T11: -0.0868 T22: -0.2012 REMARK 3 T33: -0.1140 T12: -0.0078 REMARK 3 T13: -0.0159 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 5.7705 L22: 0.9765 REMARK 3 L33: 3.0125 L12: 1.3534 REMARK 3 L13: 0.8731 L23: 0.2204 REMARK 3 S TENSOR REMARK 3 S11: 0.1455 S12: -0.0441 S13: 0.0414 REMARK 3 S21: 0.1663 S22: -0.0561 S23: 0.0671 REMARK 3 S31: 0.1168 S32: -0.3333 S33: -0.0894 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 3 E 172 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6100 25.9430 20.9520 REMARK 3 T TENSOR REMARK 3 T11: -0.0376 T22: -0.0193 REMARK 3 T33: -0.1555 T12: -0.1259 REMARK 3 T13: -0.0444 T23: 0.0620 REMARK 3 L TENSOR REMARK 3 L11: 3.4368 L22: 1.5742 REMARK 3 L33: 0.6279 L12: -0.2156 REMARK 3 L13: 0.9793 L23: 0.6039 REMARK 3 S TENSOR REMARK 3 S11: -0.0643 S12: 0.4188 S13: 0.2833 REMARK 3 S21: -0.2661 S22: 0.0548 S23: 0.0607 REMARK 3 S31: -0.3380 S32: 0.2777 S33: 0.0095 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 173 E 317 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0000 36.7310 36.7450 REMARK 3 T TENSOR REMARK 3 T11: 0.0185 T22: -0.1893 REMARK 3 T33: -0.0926 T12: -0.0455 REMARK 3 T13: -0.1313 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 5.0948 L22: 1.1856 REMARK 3 L33: 2.3184 L12: 0.7933 REMARK 3 L13: -0.3419 L23: -0.1560 REMARK 3 S TENSOR REMARK 3 S11: -0.1363 S12: 0.0527 S13: 0.1261 REMARK 3 S21: 0.0185 S22: 0.1385 S23: -0.1261 REMARK 3 S31: -0.2102 S32: 0.2366 S33: -0.0022 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QR1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000043947. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32417 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : 0.13400 REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.25700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 2OOY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6-10% PEG 3350, 0.1M SODIUM CITRATE, REMARK 280 PH 5.5, 5MM ADP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 84.14650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.04350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 84.14650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.04350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A HETEROTRIMER (THERE ARE TWO SUCH REMARK 300 TRIMERS: A+B+G AND C+D+E IN THE ASYMMETRIC UNIT), AND THE DIMER OF REMARK 300 THESE HETEROTRIMERS IS ALSO PHYSIOLOGICALLY RELEVANT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9900 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9870 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22950 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 440 REMARK 465 GLN A 441 REMARK 465 SER A 442 REMARK 465 THR A 443 REMARK 465 ARG A 444 REMARK 465 LYS A 445 REMARK 465 LYS A 446 REMARK 465 SER A 447 REMARK 465 ARG A 448 REMARK 465 ARG A 449 REMARK 465 ASN A 450 REMARK 465 PRO A 545 REMARK 465 GLU A 546 REMARK 465 ARG A 547 REMARK 465 THR A 548 REMARK 465 ALA A 549 REMARK 465 ASP A 550 REMARK 465 HIS A 551 REMARK 465 GLY A 552 REMARK 465 MET A 553 REMARK 465 ASP A 554 REMARK 465 MET B 202 REMARK 465 SER B 203 REMARK 465 GLU B 204 REMARK 465 SER B 205 REMARK 465 GLU B 206 REMARK 465 VAL B 298 REMARK 465 THR G 318 REMARK 465 THR G 319 REMARK 465 THR G 320 REMARK 465 PRO G 321 REMARK 465 GLY G 322 REMARK 465 VAL G 323 REMARK 465 PRO G 324 REMARK 465 GLU G 325 REMARK 465 GLN G 326 REMARK 465 THR G 327 REMARK 465 SER C 440 REMARK 465 GLN C 441 REMARK 465 SER C 442 REMARK 465 THR C 443 REMARK 465 ARG C 444 REMARK 465 LYS C 445 REMARK 465 LYS C 446 REMARK 465 SER C 447 REMARK 465 ARG C 448 REMARK 465 ARG C 449 REMARK 465 TYR C 542 REMARK 465 SER C 543 REMARK 465 HIS C 544 REMARK 465 PRO C 545 REMARK 465 GLU C 546 REMARK 465 ARG C 547 REMARK 465 THR C 548 REMARK 465 ALA C 549 REMARK 465 ASP C 550 REMARK 465 HIS C 551 REMARK 465 GLY C 552 REMARK 465 MET C 553 REMARK 465 ASP C 554 REMARK 465 ASP C 555 REMARK 465 LEU C 556 REMARK 465 MET D 202 REMARK 465 SER D 203 REMARK 465 GLU D 204 REMARK 465 SER D 205 REMARK 465 GLU D 206 REMARK 465 VAL D 298 REMARK 465 ALA E 1 REMARK 465 MET E 2 REMARK 465 THR E 320 REMARK 465 PRO E 321 REMARK 465 GLY E 322 REMARK 465 VAL E 323 REMARK 465 PRO E 324 REMARK 465 GLU E 325 REMARK 465 GLN E 326 REMARK 465 THR E 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 544 CG ND1 CD2 CE1 NE2 REMARK 470 TYR B 247 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU G 6 CG CD OE1 OE2 REMARK 470 ASP G 316 CG OD1 OD2 REMARK 470 LYS G 317 CG CD CE NZ REMARK 470 ASN C 450 CG OD1 ND2 REMARK 470 ASP C 540 CG OD1 OD2 REMARK 470 ILE C 541 CG1 CG2 CD1 REMARK 470 LYS D 248 CG CD CE NZ REMARK 470 GLU E 6 CG CD OE1 OE2 REMARK 470 LYS E 317 CG CD CE NZ REMARK 470 THR E 318 OG1 CG2 REMARK 470 THR E 319 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER G 217 O1B ADP G 1001 1.63 REMARK 500 O PHE G 264 N GLY G 266 2.11 REMARK 500 NH1 ARG G 287 O1B ADP G 1003 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 224 CB - CA - C ANGL. DEV. = 26.8 DEGREES REMARK 500 LYS B 225 N - CA - CB ANGL. DEV. = 20.0 DEGREES REMARK 500 PHE G 330 N - CA - CB ANGL. DEV. = 17.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 487 -58.25 69.13 REMARK 500 LYS A 489 95.88 135.01 REMARK 500 ILE A 541 -1.62 -59.25 REMARK 500 SER A 543 -159.03 -102.50 REMARK 500 LEU B 216 43.12 -78.75 REMARK 500 THR B 217 8.72 -157.50 REMARK 500 SER B 218 -74.79 -42.77 REMARK 500 ASN B 219 134.76 175.11 REMARK 500 THR B 220 -1.43 -151.95 REMARK 500 LEU B 224 -53.10 64.19 REMARK 500 LYS B 225 43.36 76.08 REMARK 500 LEU B 226 170.37 -56.28 REMARK 500 THR B 245 -9.40 -54.43 REMARK 500 LYS B 248 41.62 -154.30 REMARK 500 HIS B 259 16.23 -69.01 REMARK 500 HIS B 284 -124.73 46.88 REMARK 500 VAL G 4 145.51 -39.98 REMARK 500 GLN G 5 -7.68 66.46 REMARK 500 GLU G 96 -32.99 -39.70 REMARK 500 ASP G 98 -31.52 -33.95 REMARK 500 ARG G 139 37.35 -84.82 REMARK 500 ASN G 230 -164.09 -173.67 REMARK 500 ASN G 248 -8.98 -59.71 REMARK 500 ASN G 263 -24.46 149.54 REMARK 500 ASP G 265 -20.88 -32.12 REMARK 500 ARG G 290 156.47 175.62 REMARK 500 ASN G 329 -77.81 -164.29 REMARK 500 ALA G 333 130.91 -34.18 REMARK 500 GLU C 502 108.71 -58.71 REMARK 500 PRO C 504 -70.66 -38.70 REMARK 500 ASN D 219 112.73 -168.94 REMARK 500 THR D 220 105.69 63.91 REMARK 500 LEU D 221 16.95 151.95 REMARK 500 GLN D 222 42.81 117.36 REMARK 500 LEU D 224 44.34 -108.93 REMARK 500 LYS D 225 52.05 22.44 REMARK 500 SER D 243 126.42 -176.82 REMARK 500 ALA D 246 14.55 -143.69 REMARK 500 HIS D 284 -115.77 48.86 REMARK 500 GLU E 64 -73.92 -46.05 REMARK 500 ASN E 66 73.01 64.32 REMARK 500 LYS E 67 134.96 -175.51 REMARK 500 SER E 159 -171.06 -179.40 REMARK 500 ILE E 189 142.02 -170.05 REMARK 500 GLN E 242 -8.74 -49.96 REMARK 500 ASN E 263 6.04 -61.07 REMARK 500 ARG E 287 65.76 -111.74 REMARK 500 THR E 318 58.69 -98.48 REMARK 500 ASN E 329 -154.63 -150.50 REMARK 500 ALA E 333 127.92 -35.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 218 ASN B 219 53.42 REMARK 500 LEU B 221 GLN B 222 -123.87 REMARK 500 GLN B 222 GLU B 223 -55.20 REMARK 500 PHE B 296 ASP B 297 -141.37 REMARK 500 GLU G 118 THR G 119 -127.54 REMARK 500 ALA G 262 ASN G 263 -116.49 REMARK 500 ASN G 263 PHE G 264 -147.64 REMARK 500 ASP G 328 ASN G 329 147.49 REMARK 500 ASN G 329 PHE G 330 -142.14 REMARK 500 ASP E 3 VAL E 4 132.09 REMARK 500 ASN E 66 LYS E 67 -146.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG E 287 0.30 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP G 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP G 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP E 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP E 1004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QRC RELATED DB: PDB REMARK 900 AMP-ACTIVATED PROTEIN KINASE IN COMPLEX WITH ADP AND AMP REMARK 900 RELATED ID: 2QRD RELATED DB: PDB REMARK 900 AMP-ACTIVATED PROTEIN KINASE IN COMPLEX WITH ADP AND ATP REMARK 900 RELATED ID: 2QRE RELATED DB: PDB REMARK 900 AMP-ACTIVATED PROTEIN KINASE IN COMPLEX WITH AMZ DBREF 2QR1 A 440 576 UNP O74536 SNF1_SCHPO 440 576 DBREF 2QR1 B 203 298 UNP P78789 P78789_SCHPO 203 298 DBREF 2QR1 G 3 334 UNP Q10343 YL28_SCHPO 3 334 DBREF 2QR1 C 440 576 UNP O74536 SNF1_SCHPO 440 576 DBREF 2QR1 D 203 298 UNP P78789 P78789_SCHPO 203 298 DBREF 2QR1 E 3 334 UNP Q10343 YL28_SCHPO 3 334 SEQADV 2QR1 MET B 202 UNP P78789 EXPRESSION TAG SEQADV 2QR1 ALA G 1 UNP Q10343 EXPRESSION TAG SEQADV 2QR1 MET G 2 UNP Q10343 EXPRESSION TAG SEQADV 2QR1 MET D 202 UNP P78789 EXPRESSION TAG SEQADV 2QR1 ALA E 1 UNP Q10343 EXPRESSION TAG SEQADV 2QR1 MET E 2 UNP Q10343 EXPRESSION TAG SEQRES 1 A 137 SER GLN SER THR ARG LYS LYS SER ARG ARG ASN LYS TRP SEQRES 2 A 137 HIS PHE GLY VAL ARG CYS ARG GLY ASP ALA PRO GLU ILE SEQRES 3 A 137 LEU LEU ALA VAL TYR ARG ALA LEU GLN ARG ALA GLY ALA SEQRES 4 A 137 GLN PHE THR VAL PRO LYS PRO VAL ASN GLY LYS TYR ARG SEQRES 5 A 137 SER ASP MET TYR THR ILE LYS SER ARG TRP GLU ILE PRO SEQRES 6 A 137 HIS CYS LYS ARG GLU GLY LYS ASN THR TYR ALA TYR ILE SEQRES 7 A 137 GLU LEU GLN LEU TYR GLU VAL MET PRO GLY CYS PHE MET SEQRES 8 A 137 LEU ASP VAL LYS SER ASN GLY TYR LYS ASP ILE TYR SER SEQRES 9 A 137 HIS PRO GLU ARG THR ALA ASP HIS GLY MET ASP ASP LEU SEQRES 10 A 137 LYS SER SER PHE PRO PHE LEU ASP LEU CYS ALA MET LEU SEQRES 11 A 137 VAL CYS LYS LEU PHE SER ALA SEQRES 1 B 97 MET SER GLU SER GLU GLN TYR SER THR GLU ILE PRO ALA SEQRES 2 B 97 PHE LEU THR SER ASN THR LEU GLN GLU LEU LYS LEU PRO SEQRES 3 B 97 LYS PRO PRO SER LEU PRO PRO HIS LEU GLU LYS CYS ILE SEQRES 4 B 97 LEU ASN SER ASN THR ALA TYR LYS GLU ASP GLN SER VAL SEQRES 5 B 97 LEU PRO ASN PRO ASN HIS VAL LEU LEU ASN HIS LEU ALA SEQRES 6 B 97 ALA ALA ASN THR GLN LEU GLY VAL LEU ALA LEU SER ALA SEQRES 7 B 97 THR THR ARG TYR HIS ARG LYS TYR VAL THR THR ALA MET SEQRES 8 B 97 PHE LYS ASN PHE ASP VAL SEQRES 1 G 334 ALA MET ASP VAL GLN GLU THR GLN LYS GLY ALA LEU LYS SEQRES 2 G 334 GLU ILE GLN ALA PHE ILE ARG SER ARG THR SER TYR ASP SEQRES 3 G 334 VAL LEU PRO THR SER PHE ARG LEU ILE VAL PHE ASP VAL SEQRES 4 G 334 THR LEU PHE VAL LYS THR SER LEU SER LEU LEU THR LEU SEQRES 5 G 334 ASN ASN ILE VAL SER ALA PRO LEU TRP ASP SER GLU ALA SEQRES 6 G 334 ASN LYS PHE ALA GLY LEU LEU THR MET ALA ASP PHE VAL SEQRES 7 G 334 ASN VAL ILE LYS TYR TYR TYR GLN SER SER SER PHE PRO SEQRES 8 G 334 GLU ALA ILE ALA GLU ILE ASP LYS PHE ARG LEU LEU GLY SEQRES 9 G 334 LEU ARG GLU VAL GLU ARG LYS ILE GLY ALA ILE PRO PRO SEQRES 10 G 334 GLU THR ILE TYR VAL HIS PRO MET HIS SER LEU MET ASP SEQRES 11 G 334 ALA CYS LEU ALA MET SER LYS SER ARG ALA ARG ARG ILE SEQRES 12 G 334 PRO LEU ILE ASP VAL ASP GLY GLU THR GLY SER GLU MET SEQRES 13 G 334 ILE VAL SER VAL LEU THR GLN TYR ARG ILE LEU LYS PHE SEQRES 14 G 334 ILE SER MET ASN CYS LYS GLU THR ALA MET LEU ARG VAL SEQRES 15 G 334 PRO LEU ASN GLN MET THR ILE GLY THR TRP SER ASN LEU SEQRES 16 G 334 ALA THR ALA SER MET GLU THR LYS VAL TYR ASP VAL ILE SEQRES 17 G 334 LYS MET LEU ALA GLU LYS ASN ILE SER ALA VAL PRO ILE SEQRES 18 G 334 VAL ASN SER GLU GLY THR LEU LEU ASN VAL TYR GLU SER SEQRES 19 G 334 VAL ASP VAL MET HIS LEU ILE GLN ASP GLY ASP TYR SER SEQRES 20 G 334 ASN LEU ASP LEU SER VAL GLY GLU ALA LEU LEU LYS ARG SEQRES 21 G 334 PRO ALA ASN PHE ASP GLY VAL HIS THR CYS ARG ALA THR SEQRES 22 G 334 ASP ARG LEU ASP GLY ILE PHE ASP ALA ILE LYS HIS SER SEQRES 23 G 334 ARG VAL HIS ARG LEU PHE VAL VAL ASP GLU ASN LEU LYS SEQRES 24 G 334 LEU GLU GLY ILE LEU SER LEU ALA ASP ILE LEU ASN TYR SEQRES 25 G 334 ILE ILE TYR ASP LYS THR THR THR PRO GLY VAL PRO GLU SEQRES 26 G 334 GLN THR ASP ASN PHE GLU SER ALA VAL SEQRES 1 C 137 SER GLN SER THR ARG LYS LYS SER ARG ARG ASN LYS TRP SEQRES 2 C 137 HIS PHE GLY VAL ARG CYS ARG GLY ASP ALA PRO GLU ILE SEQRES 3 C 137 LEU LEU ALA VAL TYR ARG ALA LEU GLN ARG ALA GLY ALA SEQRES 4 C 137 GLN PHE THR VAL PRO LYS PRO VAL ASN GLY LYS TYR ARG SEQRES 5 C 137 SER ASP MET TYR THR ILE LYS SER ARG TRP GLU ILE PRO SEQRES 6 C 137 HIS CYS LYS ARG GLU GLY LYS ASN THR TYR ALA TYR ILE SEQRES 7 C 137 GLU LEU GLN LEU TYR GLU VAL MET PRO GLY CYS PHE MET SEQRES 8 C 137 LEU ASP VAL LYS SER ASN GLY TYR LYS ASP ILE TYR SER SEQRES 9 C 137 HIS PRO GLU ARG THR ALA ASP HIS GLY MET ASP ASP LEU SEQRES 10 C 137 LYS SER SER PHE PRO PHE LEU ASP LEU CYS ALA MET LEU SEQRES 11 C 137 VAL CYS LYS LEU PHE SER ALA SEQRES 1 D 97 MET SER GLU SER GLU GLN TYR SER THR GLU ILE PRO ALA SEQRES 2 D 97 PHE LEU THR SER ASN THR LEU GLN GLU LEU LYS LEU PRO SEQRES 3 D 97 LYS PRO PRO SER LEU PRO PRO HIS LEU GLU LYS CYS ILE SEQRES 4 D 97 LEU ASN SER ASN THR ALA TYR LYS GLU ASP GLN SER VAL SEQRES 5 D 97 LEU PRO ASN PRO ASN HIS VAL LEU LEU ASN HIS LEU ALA SEQRES 6 D 97 ALA ALA ASN THR GLN LEU GLY VAL LEU ALA LEU SER ALA SEQRES 7 D 97 THR THR ARG TYR HIS ARG LYS TYR VAL THR THR ALA MET SEQRES 8 D 97 PHE LYS ASN PHE ASP VAL SEQRES 1 E 334 ALA MET ASP VAL GLN GLU THR GLN LYS GLY ALA LEU LYS SEQRES 2 E 334 GLU ILE GLN ALA PHE ILE ARG SER ARG THR SER TYR ASP SEQRES 3 E 334 VAL LEU PRO THR SER PHE ARG LEU ILE VAL PHE ASP VAL SEQRES 4 E 334 THR LEU PHE VAL LYS THR SER LEU SER LEU LEU THR LEU SEQRES 5 E 334 ASN ASN ILE VAL SER ALA PRO LEU TRP ASP SER GLU ALA SEQRES 6 E 334 ASN LYS PHE ALA GLY LEU LEU THR MET ALA ASP PHE VAL SEQRES 7 E 334 ASN VAL ILE LYS TYR TYR TYR GLN SER SER SER PHE PRO SEQRES 8 E 334 GLU ALA ILE ALA GLU ILE ASP LYS PHE ARG LEU LEU GLY SEQRES 9 E 334 LEU ARG GLU VAL GLU ARG LYS ILE GLY ALA ILE PRO PRO SEQRES 10 E 334 GLU THR ILE TYR VAL HIS PRO MET HIS SER LEU MET ASP SEQRES 11 E 334 ALA CYS LEU ALA MET SER LYS SER ARG ALA ARG ARG ILE SEQRES 12 E 334 PRO LEU ILE ASP VAL ASP GLY GLU THR GLY SER GLU MET SEQRES 13 E 334 ILE VAL SER VAL LEU THR GLN TYR ARG ILE LEU LYS PHE SEQRES 14 E 334 ILE SER MET ASN CYS LYS GLU THR ALA MET LEU ARG VAL SEQRES 15 E 334 PRO LEU ASN GLN MET THR ILE GLY THR TRP SER ASN LEU SEQRES 16 E 334 ALA THR ALA SER MET GLU THR LYS VAL TYR ASP VAL ILE SEQRES 17 E 334 LYS MET LEU ALA GLU LYS ASN ILE SER ALA VAL PRO ILE SEQRES 18 E 334 VAL ASN SER GLU GLY THR LEU LEU ASN VAL TYR GLU SER SEQRES 19 E 334 VAL ASP VAL MET HIS LEU ILE GLN ASP GLY ASP TYR SER SEQRES 20 E 334 ASN LEU ASP LEU SER VAL GLY GLU ALA LEU LEU LYS ARG SEQRES 21 E 334 PRO ALA ASN PHE ASP GLY VAL HIS THR CYS ARG ALA THR SEQRES 22 E 334 ASP ARG LEU ASP GLY ILE PHE ASP ALA ILE LYS HIS SER SEQRES 23 E 334 ARG VAL HIS ARG LEU PHE VAL VAL ASP GLU ASN LEU LYS SEQRES 24 E 334 LEU GLU GLY ILE LEU SER LEU ALA ASP ILE LEU ASN TYR SEQRES 25 E 334 ILE ILE TYR ASP LYS THR THR THR PRO GLY VAL PRO GLU SEQRES 26 E 334 GLN THR ASP ASN PHE GLU SER ALA VAL HET ADP G1001 27 HET ADP G1003 27 HET ADP E1002 27 HET ADP E1004 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 7 ADP 4(C10 H15 N5 O10 P2) FORMUL 11 HOH *79(H2 O) HELIX 1 1 ASP A 461 GLY A 477 1 17 HELIX 2 2 ARG A 491 MET A 494 5 4 HELIX 3 3 ILE A 503 GLY A 510 1 8 HELIX 4 4 PRO A 561 ALA A 576 1 16 HELIX 5 5 PRO B 233 LYS B 238 5 6 HELIX 6 6 CYS B 239 SER B 243 5 5 HELIX 7 7 GLU G 6 ARG G 22 1 17 HELIX 8 8 SER G 24 LEU G 28 5 5 HELIX 9 9 PHE G 42 ASN G 53 1 12 HELIX 10 10 MET G 74 SER G 88 1 15 HELIX 11 11 PHE G 90 PHE G 100 5 11 HELIX 12 12 ARG G 101 GLY G 113 1 13 HELIX 13 13 SER G 127 SER G 138 1 12 HELIX 14 14 GLN G 163 CYS G 174 1 12 HELIX 15 15 LYS G 175 LEU G 180 5 6 HELIX 16 16 LYS G 203 LYS G 214 1 12 HELIX 17 17 SER G 234 GLN G 242 1 9 HELIX 18 18 ASP G 245 LEU G 251 5 7 HELIX 19 19 SER G 252 LEU G 258 1 7 HELIX 20 20 ARG G 275 SER G 286 1 12 HELIX 21 21 LEU G 306 TYR G 315 1 10 HELIX 22 22 ASP C 461 ALA C 476 1 16 HELIX 23 23 ARG C 491 MET C 494 5 4 HELIX 24 24 ILE C 503 GLU C 509 1 7 HELIX 25 25 PRO C 561 SER C 575 1 15 HELIX 26 26 PRO D 213 SER D 218 1 6 HELIX 27 27 PRO D 233 GLU D 237 5 5 HELIX 28 28 ALA D 246 GLN D 251 1 6 HELIX 29 29 ASN D 258 LEU D 262 5 5 HELIX 30 30 VAL E 4 SER E 21 1 18 HELIX 31 31 SER E 24 LEU E 28 5 5 HELIX 32 32 PHE E 42 ASN E 53 1 12 HELIX 33 33 THR E 73 SER E 88 1 16 HELIX 34 34 PHE E 90 PHE E 100 5 11 HELIX 35 35 ARG E 101 ILE E 112 1 12 HELIX 36 36 SER E 127 ARG E 139 1 13 HELIX 37 37 GLN E 163 MET E 172 1 10 HELIX 38 38 CYS E 174 LEU E 180 5 7 HELIX 39 39 PRO E 183 MET E 187 5 5 HELIX 40 40 LYS E 203 ASN E 215 1 13 HELIX 41 41 VAL E 235 GLN E 242 1 8 HELIX 42 42 ASP E 245 LEU E 251 5 7 HELIX 43 43 SER E 252 LEU E 258 1 7 HELIX 44 44 ARG E 275 LYS E 284 1 10 HELIX 45 45 LEU E 306 ILE E 313 1 8 SHEET 1 A 7 TRP A 452 PHE A 454 0 SHEET 2 A 7 ALA B 266 ALA B 268 -1 O ALA B 267 N HIS A 453 SHEET 3 A 7 LEU B 275 TYR B 283 -1 O SER B 278 N ALA B 266 SHEET 4 A 7 LYS B 286 LYS B 294 -1 O LYS B 294 N LEU B 275 SHEET 5 A 7 SER G 31 ASP G 38 1 O LEU G 34 N ALA B 291 SHEET 6 A 7 SER G 57 ASP G 62 1 O TRP G 61 N PHE G 37 SHEET 7 A 7 LYS G 67 THR G 73 -1 O GLY G 70 N LEU G 60 SHEET 1 B 5 VAL A 456 ARG A 459 0 SHEET 2 B 5 CYS A 528 ASP A 540 -1 O PHE A 529 N CYS A 458 SHEET 3 B 5 THR A 513 MET A 525 -1 N VAL A 524 O CYS A 528 SHEET 4 B 5 THR A 496 GLU A 502 -1 N SER A 499 O ILE A 517 SHEET 5 B 5 GLN A 479 PHE A 480 -1 N GLN A 479 O ARG A 500 SHEET 1 C 2 ARG G 142 VAL G 148 0 SHEET 2 C 2 GLU G 155 THR G 162 -1 O MET G 156 N ASP G 147 SHEET 1 D 2 ALA G 218 VAL G 222 0 SHEET 2 D 2 LEU G 228 GLU G 233 -1 O ASN G 230 N ILE G 221 SHEET 1 E 3 HIS G 268 CYS G 270 0 SHEET 2 E 3 ARG G 290 VAL G 294 1 O PHE G 292 N HIS G 268 SHEET 3 E 3 LEU G 300 SER G 305 -1 O LEU G 304 N LEU G 291 SHEET 1 F 7 HIS C 453 PHE C 454 0 SHEET 2 F 7 ALA D 266 ALA D 268 -1 O ALA D 267 N HIS C 453 SHEET 3 F 7 LEU D 275 TYR D 283 -1 O SER D 278 N ALA D 266 SHEET 4 F 7 LYS D 286 LYS D 294 -1 O LYS D 294 N LEU D 275 SHEET 5 F 7 SER E 31 ASP E 38 1 O PHE E 32 N THR D 289 SHEET 6 F 7 ALA E 58 ASP E 62 1 O TRP E 61 N PHE E 37 SHEET 7 F 7 LYS E 67 LEU E 72 -1 O GLY E 70 N LEU E 60 SHEET 1 G 5 VAL C 456 ARG C 459 0 SHEET 2 G 5 CYS C 528 ASP C 540 -1 O LEU C 531 N VAL C 456 SHEET 3 G 5 THR C 513 MET C 525 -1 N TYR C 516 O ASN C 536 SHEET 4 G 5 THR C 496 GLU C 502 -1 N ILE C 497 O LEU C 519 SHEET 5 G 5 GLN C 479 PHE C 480 -1 N GLN C 479 O ARG C 500 SHEET 1 H 2 ARG E 142 ASP E 149 0 SHEET 2 H 2 SER E 154 THR E 162 -1 O SER E 159 N LEU E 145 SHEET 1 I 2 ALA E 218 VAL E 222 0 SHEET 2 I 2 LEU E 228 GLU E 233 -1 O TYR E 232 N VAL E 219 SHEET 1 J 3 HIS E 268 CYS E 270 0 SHEET 2 J 3 ARG E 290 VAL E 294 1 O VAL E 294 N CYS E 270 SHEET 3 J 3 LEU E 300 SER E 305 -1 O LEU E 304 N LEU E 291 CISPEP 1 GLY A 488 LYS A 489 0 4.01 CISPEP 2 SER A 543 HIS A 544 0 26.72 CISPEP 3 PHE A 560 PRO A 561 0 5.10 CISPEP 4 ASN B 219 THR B 220 0 -13.54 CISPEP 5 LYS B 248 GLU B 249 0 6.30 CISPEP 6 PHE C 560 PRO C 561 0 -0.78 CISPEP 7 ASN D 219 THR D 220 0 9.86 SITE 1 AC1 12 ARG G 141 THR G 191 LEU G 195 ALA G 196 SITE 2 AC1 12 ILE G 216 SER G 217 ALA G 218 PRO G 220 SITE 3 AC1 12 ARG G 290 ILE G 303 SER G 305 ASP G 308 SITE 1 AC2 14 ASP B 250 GLN B 251 SER B 252 ARG G 33 SITE 2 AC2 14 LEU G 34 ILE G 35 ILE G 55 SER G 57 SITE 3 AC2 14 ARG G 142 THR G 162 TYR G 164 ARG G 165 SITE 4 AC2 14 ARG G 287 HIS G 289 SITE 1 AC3 12 ARG E 139 ARG E 141 THR E 191 ALA E 196 SITE 2 AC3 12 ILE E 216 SER E 217 ALA E 218 PRO E 220 SITE 3 AC3 12 ARG E 290 ILE E 303 SER E 305 ASP E 308 SITE 1 AC4 17 ASP D 250 GLN D 251 SER D 252 ARG E 33 SITE 2 AC4 17 LEU E 34 ILE E 35 ILE E 55 VAL E 56 SITE 3 AC4 17 SER E 57 PRO E 59 ARG E 142 THR E 162 SITE 4 AC4 17 TYR E 164 ARG E 165 ARG E 287 HIS E 289 SITE 5 AC4 17 HOH E1015 CRYST1 168.293 78.087 108.553 90.00 124.13 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005942 0.000000 0.004028 0.00000 SCALE2 0.000000 0.012806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011129 0.00000