HEADER CHAPERONE 30-JUL-07 2QSA TITLE CRYSTAL STRUCTURE OF J-DOMAIN OF DNAJ HOMOLOG DNJ-2 PRECURSOR FROM TITLE 2 C.ELEGANS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAJ HOMOLOG DNJ-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL J DOMAIN: RESIDUES 24-129; COMPND 5 SYNONYM: DNAJ DOMAIN PROTEIN 2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 STRAIN: BRISTOL N2; SOURCE 5 GENE: DNJ-2, B0035.2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS J-DOMAIN, HSP40, APC90001.8, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,R.MULLIGAN,M.GU,C.VOISINE,R.I.MORIMOTO,A.JOACHIMIAK,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 09-OCT-24 2QSA 1 REMARK REVDAT 4 30-AUG-23 2QSA 1 REMARK SEQADV REVDAT 3 13-JUL-11 2QSA 1 VERSN REVDAT 2 24-FEB-09 2QSA 1 VERSN REVDAT 1 14-AUG-07 2QSA 0 JRNL AUTH J.OSIPIUK,R.MULLIGAN,M.GU,C.VOISINE,R.I.MORIMOTO, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF J-DOMAIN OF DNAJ HOMOLOG DNJ-2 JRNL TITL 2 PRECURSOR FROM C.ELEGANS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 15558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 829 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 883 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 871 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 32.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.089 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.196 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1037 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1429 ; 1.462 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 133 ; 5.043 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 71 ;33.920 ;24.225 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 199 ;14.010 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;17.767 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 143 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 857 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 490 ; 0.247 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 711 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 76 ; 0.166 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.147 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.266 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 589 ; 1.067 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 937 ; 1.496 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 510 ; 2.451 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 472 ; 3.521 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4304 3.5367 28.0875 REMARK 3 T TENSOR REMARK 3 T11: -0.0120 T22: 0.0388 REMARK 3 T33: 0.0071 T12: 0.0032 REMARK 3 T13: 0.0111 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.1934 L22: 2.9132 REMARK 3 L33: 6.9961 L12: 0.8226 REMARK 3 L13: 2.8779 L23: 1.6205 REMARK 3 S TENSOR REMARK 3 S11: -0.0691 S12: -0.0783 S13: 0.0122 REMARK 3 S21: 0.1444 S22: 0.0161 S23: 0.1249 REMARK 3 S31: -0.1500 S32: -0.4923 S33: 0.0530 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): 24.7488 5.6920 22.3509 REMARK 3 T TENSOR REMARK 3 T11: 0.0162 T22: 0.0266 REMARK 3 T33: 0.0049 T12: -0.0313 REMARK 3 T13: 0.0025 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 1.2555 L22: 0.7113 REMARK 3 L33: 2.1068 L12: -0.2178 REMARK 3 L13: -1.2342 L23: -0.5617 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: -0.2338 S13: 0.1280 REMARK 3 S21: -0.0077 S22: 0.0520 S23: 0.0079 REMARK 3 S31: -0.0773 S32: 0.1681 S33: -0.0808 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 46 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): 27.1859 14.2213 15.6258 REMARK 3 T TENSOR REMARK 3 T11: 0.1098 T22: -0.0769 REMARK 3 T33: 0.0772 T12: -0.0794 REMARK 3 T13: 0.1027 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 2.0580 L22: 11.7814 REMARK 3 L33: 11.8032 L12: -3.6799 REMARK 3 L13: -4.6547 L23: 5.7472 REMARK 3 S TENSOR REMARK 3 S11: 0.5061 S12: 0.1551 S13: 0.5789 REMARK 3 S21: -0.0669 S22: 0.3932 S23: -0.5226 REMARK 3 S31: -0.6230 S32: 0.2220 S33: -0.8993 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 61 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0179 2.3894 12.1195 REMARK 3 T TENSOR REMARK 3 T11: 0.0171 T22: 0.0470 REMARK 3 T33: -0.0193 T12: -0.0228 REMARK 3 T13: 0.0078 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.0370 L22: 1.8232 REMARK 3 L33: 3.8491 L12: -0.2594 REMARK 3 L13: 0.2065 L23: -1.3480 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: -0.0082 S13: 0.0385 REMARK 3 S21: 0.0874 S22: 0.0604 S23: -0.0507 REMARK 3 S31: -0.1930 S32: 0.2835 S33: -0.0757 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 62 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 34.5206 -8.9554 16.8597 REMARK 3 T TENSOR REMARK 3 T11: 0.0361 T22: 0.0671 REMARK 3 T33: -0.0429 T12: 0.0767 REMARK 3 T13: -0.0169 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.9027 L22: 7.8179 REMARK 3 L33: 6.6336 L12: -1.1932 REMARK 3 L13: -0.8875 L23: -4.8231 REMARK 3 S TENSOR REMARK 3 S11: 0.1364 S12: 0.0434 S13: 0.1002 REMARK 3 S21: -0.1903 S22: -0.4167 S23: 0.1241 REMARK 3 S31: 0.4384 S32: 0.8875 S33: 0.2804 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 35.0892 -17.9802 23.8775 REMARK 3 T TENSOR REMARK 3 T11: 0.3036 T22: -0.1034 REMARK 3 T33: -0.0656 T12: 0.1942 REMARK 3 T13: -0.0053 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 15.4846 L22: 41.4240 REMARK 3 L33: 9.4832 L12: 1.5580 REMARK 3 L13: 7.6600 L23: -14.5582 REMARK 3 S TENSOR REMARK 3 S11: -0.4632 S12: -0.0476 S13: -0.4364 REMARK 3 S21: 1.0172 S22: -0.5832 S23: -1.3585 REMARK 3 S31: 0.9834 S32: 1.0337 S33: 1.0464 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1307 -12.1653 23.1643 REMARK 3 T TENSOR REMARK 3 T11: 0.1143 T22: -0.0204 REMARK 3 T33: -0.0190 T12: 0.0381 REMARK 3 T13: 0.0220 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 3.4497 L22: 1.3024 REMARK 3 L33: 0.6787 L12: -1.4572 REMARK 3 L13: 0.7311 L23: 0.2909 REMARK 3 S TENSOR REMARK 3 S11: 0.0690 S12: 0.1592 S13: -0.1910 REMARK 3 S21: 0.2288 S22: 0.0185 S23: 0.2174 REMARK 3 S31: 0.2469 S32: -0.0736 S33: -0.0875 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1913 -3.8064 17.9092 REMARK 3 T TENSOR REMARK 3 T11: 0.0173 T22: 0.0208 REMARK 3 T33: 0.0045 T12: 0.0025 REMARK 3 T13: 0.0137 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.5087 L22: 0.1643 REMARK 3 L33: 4.1623 L12: -0.1397 REMARK 3 L13: 1.0050 L23: 0.2475 REMARK 3 S TENSOR REMARK 3 S11: 0.0866 S12: 0.0409 S13: -0.0753 REMARK 3 S21: 0.0518 S22: -0.0292 S23: 0.1075 REMARK 3 S31: 0.0904 S32: 0.0399 S33: -0.0574 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9475 6.9982 17.0171 REMARK 3 T TENSOR REMARK 3 T11: 0.0197 T22: -0.0061 REMARK 3 T33: 0.0088 T12: 0.0141 REMARK 3 T13: -0.0174 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 3.6246 L22: 0.4443 REMARK 3 L33: 1.8324 L12: -0.0323 REMARK 3 L13: -1.6251 L23: 0.7145 REMARK 3 S TENSOR REMARK 3 S11: 0.0167 S12: 0.1164 S13: 0.1918 REMARK 3 S21: -0.0765 S22: 0.0532 S23: -0.0047 REMARK 3 S31: -0.0478 S32: -0.0654 S33: -0.0699 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): 6.2051 2.1645 18.8636 REMARK 3 T TENSOR REMARK 3 T11: -0.0369 T22: 0.0476 REMARK 3 T33: 0.0242 T12: -0.0111 REMARK 3 T13: 0.0159 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 5.7811 L22: 3.0090 REMARK 3 L33: 0.9089 L12: 0.7066 REMARK 3 L13: -1.2448 L23: 1.2164 REMARK 3 S TENSOR REMARK 3 S11: -0.2772 S12: 0.2268 S13: -0.2929 REMARK 3 S21: -0.1254 S22: 0.2352 S23: -0.1070 REMARK 3 S31: -0.1793 S32: -0.1509 S33: 0.0420 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QSA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000043991. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16389 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 27.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 33.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2O37 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M NACL, 0.1 M TRIS BUFFER PH 7.0, REMARK 280 0.2 M MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.57400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.42541 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.00533 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 40.57400 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 23.42541 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.00533 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 40.57400 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 23.42541 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.00533 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.85082 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 40.01067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.85082 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 40.01067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.85082 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 40.01067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE PROGRAM GENERATED ASSEMBLY REMARK 300 INFORMATION FOR THE STRUCTURE IN THIS ENTRY. REMARK 300 AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS REMARK 300 POLYPEPTIDE IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 365 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 366 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 392 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ALA A 123 REMARK 465 ALA A 124 REMARK 465 PRO A 125 REMARK 465 LYS A 126 REMARK 465 VAL A 127 REMARK 465 ASP A 128 REMARK 465 LEU A 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 109 O HOH A 410 2.18 REMARK 500 OE2 GLU A 42 O HOH A 400 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 306 O HOH A 389 6555 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 31 -130.19 52.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC90001.8 RELATED DB: TARGETDB REMARK 900 RELATED ID: 2O37 RELATED DB: PDB REMARK 900 J-DOMAIN OF SIS1 PROTEIN, HSP40 CO-CHAPERONE FROM SACCHAROMYCES REMARK 900 CEREVISIAE REMARK 900 RELATED ID: 2OCH RELATED DB: PDB REMARK 900 J-DOMAIN OF DNJ-12 FROM CAENORHABDITIS ELEGANS DBREF 2QSA A 24 129 UNP Q17433 DNJ2_CAEEL 24 129 SEQADV 2QSA SER A 21 UNP Q17433 EXPRESSION TAG SEQADV 2QSA ASN A 22 UNP Q17433 EXPRESSION TAG SEQADV 2QSA ALA A 23 UNP Q17433 EXPRESSION TAG SEQRES 1 A 109 SER ASN ALA VAL GLY PHE ALA PRO GLU LEU TYR CYS GLY SEQRES 2 A 109 LEU GLU ASN CYS TYR ASP VAL LEU GLU VAL ASN ARG GLU SEQRES 3 A 109 GLU PHE ASP LYS GLN LYS LEU ALA LYS ALA TYR ARG ALA SEQRES 4 A 109 LEU ALA ARG LYS HIS HIS PRO ASP ARG VAL LYS ASN LYS SEQRES 5 A 109 GLU GLU LYS LEU LEU ALA GLU GLU ARG PHE ARG VAL ILE SEQRES 6 A 109 ALA THR ALA TYR GLU THR LEU LYS ASP ASP GLU ALA LYS SEQRES 7 A 109 THR ASN TYR ASP TYR TYR LEU ASP HIS PRO ASP GLN ARG SEQRES 8 A 109 PHE TYR ASN TYR TYR GLN TYR TYR ARG LEU ARG ALA ALA SEQRES 9 A 109 PRO LYS VAL ASP LEU HET CL A 301 1 HETNAM CL CHLORIDE ION FORMUL 2 CL CL 1- FORMUL 3 HOH *109(H2 O) HELIX 1 1 ASN A 22 PHE A 26 5 5 HELIX 2 2 ASN A 36 LEU A 41 1 6 HELIX 3 3 ASN A 44 PHE A 48 5 5 HELIX 4 4 ASP A 49 HIS A 64 1 16 HELIX 5 5 HIS A 65 VAL A 69 5 5 HELIX 6 6 ASN A 71 ASP A 94 1 24 HELIX 7 7 ASP A 94 HIS A 107 1 14 HELIX 8 8 GLN A 110 ARG A 122 1 13 SSBOND 1 CYS A 32 CYS A 37 1555 1555 2.15 SITE 1 AC1 4 LEU A 34 ARG A 58 ARG A 62 HOH A 343 CRYST1 81.148 81.148 60.016 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012323 0.007115 0.000000 0.00000 SCALE2 0.000000 0.014230 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016662 0.00000