HEADER STRUCTURAL PROTEIN/RNA 06-AUG-07 2QUX TITLE PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (25-MER); COMPND 3 CHAIN: C, F, I, L, O, R; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: COAT PROTEIN; COMPND 7 CHAIN: A, B, D, E, G, H, J, K, M, N, P, Q; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PP7; SOURCE 5 ORGANISM_TAXID: 12023; SOURCE 6 GENE: PP7 COAT PROTEIN; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET22HT KEYWDS BACTERIOPHAGE COAT PROTEIN, RNA-PROTEIN COMPLEX, CAPSID PROTEIN, KEYWDS 2 STRUCTURAL PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.A.CHAO REVDAT 6 30-AUG-23 2QUX 1 REMARK SEQADV REVDAT 5 02-AUG-17 2QUX 1 SOURCE REMARK REVDAT 4 13-JUL-11 2QUX 1 VERSN REVDAT 3 24-FEB-09 2QUX 1 VERSN REVDAT 2 22-JAN-08 2QUX 1 JRNL REVDAT 1 18-DEC-07 2QUX 0 JRNL AUTH J.A.CHAO,Y.PATSKOVSKY,S.C.ALMO,R.H.SINGER JRNL TITL STRUCTURAL BASIS FOR THE COEVOLUTION OF A VIRAL RNA-PROTEIN JRNL TITL 2 COMPLEX. JRNL REF NAT.STRUCT.MOL.BIOL. V. 15 103 2008 JRNL REFN ISSN 1545-9993 JRNL PMID 18066080 JRNL DOI 10.1038/NSMB1327 REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 82944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2545 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11213 REMARK 3 NUCLEIC ACID ATOMS : 3198 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 512 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2QUX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044086. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85663 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 33.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2QUD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.1M NA CITRATE, 0.01M REMARK 280 MES, 0.001M COBALTOUS CHLORIDE HEXAHYDRATE, 0.18M AMMONIUM REMARK 280 SULFATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 87.48500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.69400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 87.48500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 72.69400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9230 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8550 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8870 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9150 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, J, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8070 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8280 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 MET B 0 REMARK 465 GLY D -3 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 GLY E -3 REMARK 465 GLY E -2 REMARK 465 SER E -1 REMARK 465 GLY G -3 REMARK 465 GLY G -2 REMARK 465 GLY H -3 REMARK 465 GLY H -2 REMARK 465 SER H -1 REMARK 465 MET H 0 REMARK 465 ALA H 22 REMARK 465 ASP H 23 REMARK 465 GLY J -3 REMARK 465 GLY J -2 REMARK 465 GLY K -3 REMARK 465 GLY K -2 REMARK 465 ASP K 66 REMARK 465 GLY M -3 REMARK 465 GLY M -2 REMARK 465 SER M -1 REMARK 465 MET M 0 REMARK 465 SER M 1 REMARK 465 LYS M 2 REMARK 465 GLY N -3 REMARK 465 GLY N -2 REMARK 465 SER N -1 REMARK 465 MET N 0 REMARK 465 ALA N 22 REMARK 465 ASP N 23 REMARK 465 GLY P -3 REMARK 465 GLY P -2 REMARK 465 SER P -1 REMARK 465 GLY Q -3 REMARK 465 GLY Q -2 REMARK 465 SER Q -1 REMARK 465 MET Q 0 REMARK 465 ALA Q 22 REMARK 465 VAL Q 65 REMARK 465 ASP Q 66 REMARK 465 SER Q 67 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G I 15 C4 G I 15 C5 -0.044 REMARK 500 G I 15 C5 G I 15 N7 -0.048 REMARK 500 G I 15 N7 G I 15 C8 -0.053 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 C C 3 O4' - C1' - N1 ANGL. DEV. = 5.9 DEGREES REMARK 500 C C 5 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 A C 6 O4' - C1' - N9 ANGL. DEV. = -5.8 DEGREES REMARK 500 A C 13 O4' - C1' - N9 ANGL. DEV. = 5.3 DEGREES REMARK 500 G C 15 N9 - C4 - C5 ANGL. DEV. = -2.4 DEGREES REMARK 500 C C 17 C2 - N3 - C4 ANGL. DEV. = 3.2 DEGREES REMARK 500 C C 20 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 C C 20 C2 - N3 - C4 ANGL. DEV. = 3.2 DEGREES REMARK 500 U C 22 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 C F 3 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 A F 6 O3' - P - OP2 ANGL. DEV. = 7.8 DEGREES REMARK 500 C F 17 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 C F 17 C2 - N3 - C4 ANGL. DEV. = 3.3 DEGREES REMARK 500 C F 20 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 U I 18 C2 - N3 - C4 ANGL. DEV. = 3.6 DEGREES REMARK 500 U I 19 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 C I 20 O4' - C1' - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 C I 24 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 C I 25 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 A L 6 O4' - C1' - N9 ANGL. DEV. = 5.3 DEGREES REMARK 500 U L 18 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 U L 19 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 C L 20 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 U L 22 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 C O 3 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 U O 18 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 C O 20 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 U O 22 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 C R 17 C6 - N1 - C2 ANGL. DEV. = -2.6 DEGREES REMARK 500 U R 18 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 U R 19 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 C R 20 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 C R 25 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 C R 25 C2 - N3 - C4 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 127 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 127 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG D 54 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG E 99 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG E 99 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG G 39 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG G 45 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG G 45 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG G 54 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG K 99 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG K 99 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG N 54 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG N 127 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 77 119.25 -162.98 REMARK 500 THR B 21 -167.20 -121.86 REMARK 500 SER B 67 65.59 -103.33 REMARK 500 SER D 67 67.55 -113.51 REMARK 500 LYS E 30 59.32 -90.90 REMARK 500 SER G 67 64.47 -111.66 REMARK 500 ILE H 18 -50.80 -121.47 REMARK 500 MET K 0 -73.09 -56.54 REMARK 500 SER K 20 78.41 -154.69 REMARK 500 ILE M 18 -49.69 -130.28 REMARK 500 VAL N 8 78.25 -111.95 REMARK 500 SER N 67 62.76 -111.21 REMARK 500 LYS P 50 36.08 71.40 REMARK 500 SER P 67 58.90 -102.76 REMARK 500 SER Q 20 72.14 -152.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER P 20 THR P 21 146.83 REMARK 500 LEU Q 75 PRO Q 76 -141.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL E 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL K 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL R 26 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL J 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL J 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL G 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL L 26 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL I 26 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DWN RELATED DB: PDB REMARK 900 PP7 CAPSID REMARK 900 RELATED ID: 2QUD RELATED DB: PDB REMARK 900 PP7 COAT PROTEIN DIMER DBREF 2QUX A 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX A 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX B 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX B 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX D 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX D 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX E 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX E 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX G 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX G 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX H 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX H 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX J 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX J 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX K 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX K 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX M 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX M 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX N 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX N 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX P 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX P 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX Q 0 66 UNP Q38062 Q38062_BPPP7 1 67 DBREF 2QUX Q 75 127 UNP Q38062 Q38062_BPPP7 76 128 DBREF 2QUX C 1 25 PDB 2QUX 2QUX 1 25 DBREF 2QUX F 1 25 PDB 2QUX 2QUX 1 25 DBREF 2QUX I 1 25 PDB 2QUX 2QUX 1 25 DBREF 2QUX L 1 25 PDB 2QUX 2QUX 1 25 DBREF 2QUX O 1 25 PDB 2QUX 2QUX 1 25 DBREF 2QUX R 1 25 PDB 2QUX 2QUX 1 25 SEQADV 2QUX GLY A -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY A -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER A -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER A 67 UNP Q38062 LINKER SEQADV 2QUX GLY A 68 UNP Q38062 LINKER SEQADV 2QUX GLY B -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY B -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER B -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER B 67 UNP Q38062 LINKER SEQADV 2QUX GLY B 68 UNP Q38062 LINKER SEQADV 2QUX GLY D -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY D -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER D -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER D 67 UNP Q38062 LINKER SEQADV 2QUX GLY D 68 UNP Q38062 LINKER SEQADV 2QUX GLY E -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY E -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER E -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER E 67 UNP Q38062 LINKER SEQADV 2QUX GLY E 68 UNP Q38062 LINKER SEQADV 2QUX GLY G -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY G -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER G -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER G 67 UNP Q38062 LINKER SEQADV 2QUX GLY G 68 UNP Q38062 LINKER SEQADV 2QUX GLY H -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY H -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER H -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER H 67 UNP Q38062 LINKER SEQADV 2QUX GLY H 68 UNP Q38062 LINKER SEQADV 2QUX GLY J -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY J -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER J -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER J 67 UNP Q38062 LINKER SEQADV 2QUX GLY J 68 UNP Q38062 LINKER SEQADV 2QUX GLY K -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY K -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER K -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER K 67 UNP Q38062 LINKER SEQADV 2QUX GLY K 68 UNP Q38062 LINKER SEQADV 2QUX GLY M -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY M -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER M -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER M 67 UNP Q38062 LINKER SEQADV 2QUX GLY M 68 UNP Q38062 LINKER SEQADV 2QUX GLY N -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY N -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER N -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER N 67 UNP Q38062 LINKER SEQADV 2QUX GLY N 68 UNP Q38062 LINKER SEQADV 2QUX GLY P -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY P -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER P -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER P 67 UNP Q38062 LINKER SEQADV 2QUX GLY P 68 UNP Q38062 LINKER SEQADV 2QUX GLY Q -3 UNP Q38062 EXPRESSION TAG SEQADV 2QUX GLY Q -2 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER Q -1 UNP Q38062 EXPRESSION TAG SEQADV 2QUX SER Q 67 UNP Q38062 LINKER SEQADV 2QUX GLY Q 68 UNP Q38062 LINKER SEQRES 1 C 25 G G C A C A G A A G A U A SEQRES 2 C 25 U G G C U U C G U G C C SEQRES 1 F 25 G G C A C A G A A G A U A SEQRES 2 F 25 U G G C U U C G U G C C SEQRES 1 I 25 G G C A C A G A A G A U A SEQRES 2 I 25 U G G C U U C G U G C C SEQRES 1 L 25 G G C A C A G A A G A U A SEQRES 2 L 25 U G G C U U C G U G C C SEQRES 1 O 25 G G C A C A G A A G A U A SEQRES 2 O 25 U G G C U U C G U G C C SEQRES 1 R 25 G G C A C A G A A G A U A SEQRES 2 R 25 U G G C U U C G U G C C SEQRES 1 A 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 A 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 A 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 A 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 A 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 A 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 A 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 A 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 A 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 A 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 B 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 B 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 B 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 B 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 B 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 B 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 B 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 B 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 B 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 B 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 D 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 D 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 D 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 D 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 D 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 D 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 D 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 D 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 D 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 D 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 E 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 E 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 E 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 E 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 E 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 E 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 E 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 E 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 E 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 E 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 G 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 G 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 G 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 G 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 G 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 G 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 G 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 G 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 G 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 G 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 H 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 H 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 H 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 H 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 H 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 H 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 H 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 H 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 H 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 H 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 J 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 J 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 J 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 J 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 J 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 J 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 J 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 J 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 J 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 J 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 K 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 K 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 K 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 K 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 K 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 K 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 K 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 K 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 K 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 K 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 M 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 M 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 M 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 M 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 M 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 M 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 M 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 M 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 M 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 M 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 N 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 N 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 N 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 N 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 N 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 N 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 N 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 N 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 N 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 N 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 P 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 P 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 P 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 P 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 P 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 P 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 P 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 P 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 P 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 P 125 VAL ASN LEU VAL PRO LEU GLY ARG SEQRES 1 Q 125 GLY GLY SER MET SER LYS THR ILE VAL LEU SER VAL GLY SEQRES 2 Q 125 GLU ALA THR ARG THR LEU THR GLU ILE GLN SER THR ALA SEQRES 3 Q 125 ASP ARG GLN ILE PHE GLU GLU LYS VAL GLY PRO LEU VAL SEQRES 4 Q 125 GLY ARG LEU ARG LEU THR ALA SER LEU ARG GLN ASN GLY SEQRES 5 Q 125 ALA LYS THR ALA TYR ARG VAL ASN LEU LYS LEU ASP GLN SEQRES 6 Q 125 ALA ASP VAL VAL ASP SER GLY LEU PRO LYS VAL ARG TYR SEQRES 7 Q 125 THR GLN VAL TRP SER HIS ASP VAL THR ILE VAL ALA ASN SEQRES 8 Q 125 SER THR GLU ALA SER ARG LYS SER LEU TYR ASP LEU THR SEQRES 9 Q 125 LYS SER LEU VAL ALA THR SER GLN VAL GLU ASP LEU VAL SEQRES 10 Q 125 VAL ASN LEU VAL PRO LEU GLY ARG HET GOL I 26 6 HET GOL L 26 6 HET GOL R 26 6 HET GOL A 128 6 HET GOL A 129 6 HET GOL B 128 6 HET GOL B 129 6 HET GOL D 128 6 HET GOL D 129 6 HET GOL E 128 6 HET GOL G 128 6 HET GOL H 128 6 HET GOL J 128 6 HET GOL J 129 6 HET GOL K 128 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 19 GOL 15(C3 H8 O3) FORMUL 34 HOH *512(H2 O) HELIX 1 1 THR A 95 THR A 112 1 18 HELIX 2 2 THR A 112 LEU A 122 1 11 HELIX 3 3 THR B 95 THR B 112 1 18 HELIX 4 4 THR B 112 LEU B 122 1 11 HELIX 5 5 THR D 95 ALA D 111 1 17 HELIX 6 6 THR D 112 LEU D 122 1 11 HELIX 7 7 THR E 95 THR E 112 1 18 HELIX 8 8 THR E 112 LEU E 122 1 11 HELIX 9 9 THR G 95 THR G 112 1 18 HELIX 10 10 THR G 112 LEU G 122 1 11 HELIX 11 11 THR H 95 THR H 112 1 18 HELIX 12 12 THR H 112 LEU H 122 1 11 HELIX 13 13 THR J 95 THR J 112 1 18 HELIX 14 14 THR J 112 LEU J 122 1 11 HELIX 15 15 THR K 95 THR K 112 1 18 HELIX 16 16 THR K 112 LEU K 122 1 11 HELIX 17 17 THR M 95 THR M 112 1 18 HELIX 18 18 THR M 112 LEU M 122 1 11 HELIX 19 19 THR N 95 THR N 112 1 18 HELIX 20 20 THR N 112 LEU N 122 1 11 HELIX 21 21 THR P 95 THR P 112 1 18 HELIX 22 22 THR P 112 LEU P 122 1 11 HELIX 23 23 THR Q 95 THR Q 112 1 18 HELIX 24 24 THR Q 112 LEU Q 122 1 11 SHEET 1 A12 THR A 3 VAL A 8 0 SHEET 2 A12 ALA A 11 SER A 20 -1 O LEU A 15 N ILE A 4 SHEET 3 A12 ARG A 24 GLU A 28 -1 O GLU A 28 N THR A 16 SHEET 4 A12 ARG A 39 GLN A 46 -1 O LEU A 40 N PHE A 27 SHEET 5 A12 ALA A 52 VAL A 65 -1 O ARG A 54 N ARG A 45 SHEET 6 A12 LYS A 77 VAL A 91 -1 O ARG A 79 N ASP A 63 SHEET 7 A12 PRO B 76 VAL B 91 -1 O THR B 89 N VAL A 83 SHEET 8 A12 ALA B 52 ASP B 66 -1 N ASP B 63 O ARG B 79 SHEET 9 A12 ARG B 39 GLN B 46 -1 N THR B 41 O LYS B 58 SHEET 10 A12 ARG B 24 GLU B 28 -1 N PHE B 27 O LEU B 40 SHEET 11 A12 ALA B 11 SER B 20 -1 N THR B 16 O GLU B 28 SHEET 12 A12 THR B 3 VAL B 8 -1 N LEU B 6 O ARG B 13 SHEET 1 B12 THR D 3 VAL D 8 0 SHEET 2 B12 ALA D 11 ILE D 18 -1 O ARG D 13 N LEU D 6 SHEET 3 B12 GLN D 25 GLU D 28 -1 O GLU D 28 N THR D 16 SHEET 4 B12 ARG D 39 GLN D 46 -1 O LEU D 40 N PHE D 27 SHEET 5 B12 ALA D 52 VAL D 65 -1 O ARG D 54 N ARG D 45 SHEET 6 B12 LYS D 77 VAL D 91 -1 O ILE D 90 N TYR D 53 SHEET 7 B12 LYS E 77 VAL E 91 -1 O THR E 89 N VAL D 83 SHEET 8 B12 ALA E 52 VAL E 65 -1 N GLN E 61 O GLN E 82 SHEET 9 B12 ARG E 39 GLN E 46 -1 N ARG E 39 O ASP E 60 SHEET 10 B12 ARG E 24 GLU E 28 -1 N GLN E 25 O ALA E 42 SHEET 11 B12 ALA E 11 SER E 20 -1 N GLN E 19 O ILE E 26 SHEET 12 B12 THR E 3 VAL E 8 -1 N LEU E 6 O ARG E 13 SHEET 1 C12 THR G 3 VAL G 8 0 SHEET 2 C12 ALA G 11 SER G 20 -1 O ARG G 13 N LEU G 6 SHEET 3 C12 GLN G 25 GLU G 28 -1 O GLU G 28 N THR G 16 SHEET 4 C12 ARG G 39 GLN G 46 -1 O LEU G 40 N PHE G 27 SHEET 5 C12 ALA G 52 VAL G 65 -1 O ARG G 54 N ARG G 45 SHEET 6 C12 LYS G 77 VAL G 91 -1 O ARG G 79 N ASP G 63 SHEET 7 C12 LYS H 77 VAL H 91 -1 O VAL H 83 N THR G 89 SHEET 8 C12 ALA H 52 VAL H 65 -1 N TYR H 53 O ILE H 90 SHEET 9 C12 ARG H 39 GLN H 46 -1 N ARG H 39 O ASP H 60 SHEET 10 C12 GLN H 25 GLU H 28 -1 N PHE H 27 O LEU H 40 SHEET 11 C12 ALA H 11 GLN H 19 -1 N ILE H 18 O ILE H 26 SHEET 12 C12 THR H 3 VAL H 8 -1 N LEU H 6 O ARG H 13 SHEET 1 D12 THR J 3 VAL J 8 0 SHEET 2 D12 ALA J 11 SER J 20 -1 O ARG J 13 N LEU J 6 SHEET 3 D12 ARG J 24 GLU J 28 -1 O GLU J 28 N THR J 16 SHEET 4 D12 ARG J 39 GLN J 46 -1 O LEU J 40 N PHE J 27 SHEET 5 D12 ALA J 52 VAL J 65 -1 O ARG J 54 N ARG J 45 SHEET 6 D12 LYS J 77 VAL J 91 -1 O ARG J 79 N ASP J 63 SHEET 7 D12 LYS K 77 VAL K 91 -1 O VAL K 83 N THR J 89 SHEET 8 D12 ALA K 52 VAL K 65 -1 N ASP K 63 O TYR K 80 SHEET 9 D12 ARG K 39 GLN K 46 -1 N ARG K 45 O ARG K 54 SHEET 10 D12 ARG K 24 GLU K 28 -1 N PHE K 27 O LEU K 40 SHEET 11 D12 ALA K 11 SER K 20 -1 N THR K 16 O GLU K 28 SHEET 12 D12 THR K 3 VAL K 8 -1 N LEU K 6 O ARG K 13 SHEET 1 E12 ILE M 4 VAL M 8 0 SHEET 2 E12 ALA M 11 SER M 20 -1 O ARG M 13 N LEU M 6 SHEET 3 E12 ARG M 24 GLU M 28 -1 O ILE M 26 N ILE M 18 SHEET 4 E12 ARG M 39 GLN M 46 -1 O LEU M 40 N PHE M 27 SHEET 5 E12 ALA M 52 ASP M 66 -1 O ARG M 54 N ARG M 45 SHEET 6 E12 PRO M 76 VAL M 91 -1 O GLN M 82 N GLN M 61 SHEET 7 E12 PRO N 76 VAL N 91 -1 O THR N 89 N VAL M 83 SHEET 8 E12 ALA N 52 ASP N 66 -1 N ASP N 63 O ARG N 79 SHEET 9 E12 ARG N 39 GLN N 46 -1 N THR N 41 O LYS N 58 SHEET 10 E12 GLN N 25 GLU N 28 -1 N PHE N 27 O LEU N 40 SHEET 11 E12 ALA N 11 GLN N 19 -1 N THR N 16 O GLU N 28 SHEET 12 E12 THR N 3 VAL N 8 -1 N LEU N 6 O ARG N 13 SHEET 1 F12 THR P 3 VAL P 8 0 SHEET 2 F12 ALA P 11 SER P 20 -1 O ARG P 13 N LEU P 6 SHEET 3 F12 GLN P 25 GLU P 28 -1 O GLU P 28 N THR P 16 SHEET 4 F12 ARG P 39 GLN P 46 -1 O LEU P 40 N PHE P 27 SHEET 5 F12 ALA P 52 ASP P 66 -1 O ASP P 60 N ARG P 39 SHEET 6 F12 PRO P 76 VAL P 91 -1 O HIS P 86 N LEU P 57 SHEET 7 F12 THR Q 81 VAL Q 91 -1 O VAL Q 83 N THR P 89 SHEET 8 F12 ALA Q 52 ALA Q 62 -1 N LEU Q 57 O HIS Q 86 SHEET 9 F12 ARG Q 39 GLN Q 46 -1 N ARG Q 39 O ASP Q 60 SHEET 10 F12 ARG Q 24 GLU Q 28 -1 N PHE Q 27 O LEU Q 40 SHEET 11 F12 ALA Q 11 GLN Q 19 -1 N ILE Q 18 O ILE Q 26 SHEET 12 F12 THR Q 3 VAL Q 8 -1 N ILE Q 4 O LEU Q 15 SITE 1 AC1 8 ILE A 4 VAL A 5 THR B 112 SER B 113 SITE 2 AC1 8 GLN B 114 ARG B 127 HOH B 159 ALA K 22 SITE 1 AC2 8 ILE D 4 VAL D 5 THR E 112 SER E 113 SITE 2 AC2 8 GLN E 114 HOH E 158 HOH E 161 HOH E 172 SITE 1 AC3 8 THR A 112 SER A 113 GLN A 114 GOL A 129 SITE 2 AC3 8 HOH A 155 HOH A 166 ILE B 4 VAL B 5 SITE 1 AC4 4 VAL G 5 SER H 113 GLN H 114 HOH H 143 SITE 1 AC5 4 GLU D 28 LEU D 34 ARG D 39 TYR G 53 SITE 1 AC6 6 ILE J 4 VAL J 5 THR K 112 SER K 113 SITE 2 AC6 6 GLN K 114 HOH K 147 SITE 1 AC7 4 LYS P 58 ASP P 60 VAL P 83 A R 6 SITE 1 AC8 5 THR J 112 SER J 113 GLN J 114 ILE K 4 SITE 2 AC8 5 VAL K 5 SITE 1 AC9 4 ASP B 23 ARG B 24 GLN B 25 LEU B 44 SITE 1 BC1 7 GLY G 32 PRO G 33 ASP G 66 SER J 94 SITE 2 BC1 7 THR J 95 GLU J 96 ARG J 99 SITE 1 BC2 5 GLN A 114 ASP A 117 ARG A 127 GOL A 128 SITE 2 BC2 5 ALA E 97 SITE 1 BC3 7 PRO D 33 ASP D 66 PRO D 76 ASN G 93 SITE 2 BC3 7 SER G 94 THR G 95 GLU G 96 SITE 1 BC4 4 THR D 112 SER D 113 GLN D 114 VAL E 5 SITE 1 BC5 3 ARG J 45 G L 10 A L 11 SITE 1 BC6 5 ARG G 45 ASN G 47 ARG G 54 A I 11 SITE 2 BC6 5 U I 12 CRYST1 174.970 145.388 109.655 90.00 122.94 90.00 C 1 2 1 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005715 0.000000 0.003703 0.00000 SCALE2 0.000000 0.006878 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010867 0.00000