HEADER LYASE 16-AUG-07 2QZC TITLE CRYSTAL STRUCTURE OF A PUTATIVE TENA-LIKE THIAMINASE (TENA-1, SSO2206) TITLE 2 FROM SULFOLOBUS SOLFATARICUS P2 AT 1.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ACTIVATOR TENA-1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS P2; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: P2, DSM 1617, JCM 11322; SOURCE 5 ATCC: 35092; SOURCE 6 GENE: NP_343586.1, TENA-1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS HEME OXYGENASE-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 2QZC 1 REMARK SEQADV REVDAT 6 24-JUL-19 2QZC 1 REMARK LINK REVDAT 5 25-OCT-17 2QZC 1 REMARK REVDAT 4 13-JUL-11 2QZC 1 VERSN REVDAT 3 23-MAR-11 2QZC 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2QZC 1 VERSN REVDAT 1 11-SEP-07 2QZC 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE TENA-LIKE THIAMINASE II JRNL TITL 2 (NP_343586.1) FROM SULFOLOBUS SOLFATARICUS AT 1.50 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 87230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4372 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5899 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 326 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3329 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 312 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : 0.22000 REMARK 3 B33 (A**2) : -0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.060 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.060 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.342 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3657 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2427 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5015 ; 1.500 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5926 ; 1.344 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 468 ; 3.608 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 165 ;33.449 ;23.455 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 597 ;10.186 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;13.266 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 562 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4066 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 817 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 770 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2364 ; 0.141 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1827 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1599 ; 0.074 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 246 ; 0.115 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.069 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 37 ; 0.137 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.203 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2204 ; 1.667 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 868 ; 0.439 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3502 ; 2.539 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1723 ; 3.839 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1482 ; 5.437 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 5 A 213 6 REMARK 3 1 B 5 B 213 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 2642 ; 0.200 ; 5.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 2642 ; 7.220 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 80 REMARK 3 RESIDUE RANGE : A 83 A 213 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1020 24.9010 -10.5370 REMARK 3 T TENSOR REMARK 3 T11: -0.0266 T22: -0.0143 REMARK 3 T33: -0.0220 T12: -0.0022 REMARK 3 T13: 0.0059 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.3301 L22: 0.1823 REMARK 3 L33: 0.6458 L12: 0.1831 REMARK 3 L13: -0.1020 L23: -0.1447 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: 0.0347 S13: 0.0167 REMARK 3 S21: -0.0264 S22: 0.0355 S23: 0.0072 REMARK 3 S31: -0.0401 S32: -0.0755 S33: -0.0119 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 80 REMARK 3 RESIDUE RANGE : B 86 B 213 REMARK 3 ORIGIN FOR THE GROUP (A): -11.9930 -4.7820 -14.5980 REMARK 3 T TENSOR REMARK 3 T11: 0.0955 T22: 0.1640 REMARK 3 T33: -0.0826 T12: -0.2612 REMARK 3 T13: -0.0596 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.5332 L22: 0.4373 REMARK 3 L33: 0.9150 L12: 0.4824 REMARK 3 L13: -0.1892 L23: -0.1987 REMARK 3 S TENSOR REMARK 3 S11: -0.0732 S12: 0.1225 S13: 0.0952 REMARK 3 S21: -0.2420 S22: 0.1121 S23: -0.0617 REMARK 3 S31: 0.4093 S32: -0.4372 S33: -0.0390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 4. RESIDUES 1-2, 81-82 IN CHAIN A AND 1-4, 81-85 IN CHAIN B ARE REMARK 3 DISORDERED REMARK 3 AND NOT INCLUDED IN THE MODEL. REMARK 3 5. IMIDAZOLE MOLECULES FROM THE PURIFICATION SOLUTION ARE MODELED. REMARK 3 6. GLYCEROL MOLECULES FROM THE CRYO SOLUTION ARE MODELED. REMARK 3 7. IMIDAZOLE AND ONE GLYCEROL MOLECULES OCCUPY THE ACTIVE SITE OF REMARK 3 THE REMARK 3 PROTEIN. REMARK 4 REMARK 4 2QZC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000044234. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL1-5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918381, 0.979310, 0.978921 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL REMARK 200 OPTICS : 1M LONG RH COATED BENT REMARK 200 CYLINDRICAL MIRROR FOR REMARK 200 HORIZONTAL AND VERTICAL FOCUSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87321 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 38.152 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.68800 REMARK 200 R SYM FOR SHELL (I) : 0.68800 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 2.4M (NH4)2SO4, 0.1M HEPES REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.88000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.43100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.43100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 101.82000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.43100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.43100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.94000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.43100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.43100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 101.82000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.43100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.43100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.94000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.88000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. SIZE EXCLUSION CHROMATOGRAPHY REMARK 300 SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10570 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 ARG A 81 REMARK 465 ASP A 82 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 ILE B 3 REMARK 465 VAL B 4 REMARK 465 ARG B 81 REMARK 465 ASP B 82 REMARK 465 LYS B 83 REMARK 465 GLY B 84 REMARK 465 LEU B 85 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 16 CD OE1 OE2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LEU A 85 CG CD1 CD2 REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 ASP A 96 CG OD1 OD2 REMARK 470 LYS A 104 CD CE NZ REMARK 470 GLU B 8 CD OE1 OE2 REMARK 470 GLU B 16 CG CD OE1 OE2 REMARK 470 LYS B 72 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 ASP B 96 CG OD1 OD2 REMARK 470 LYS B 104 CD CE NZ REMARK 470 GLU B 153 CG CD OE1 OE2 REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 GLU B 166 CG CD OE1 OE2 REMARK 470 LYS B 169 CE NZ REMARK 470 GLU B 172 CG CD OE1 OE2 REMARK 470 GLU B 185 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 136 CB CYS A 136 SG -0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 196 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 CYS B 136 CA - CB - SG ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 211 61.94 -102.93 REMARK 500 PHE B 78 30.40 -93.54 REMARK 500 THR B 211 63.79 -101.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 216 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 376189 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 2QZC A 1 213 UNP Q97WL0 Q97WL0_SULSO 1 213 DBREF 2QZC B 1 213 UNP Q97WL0 Q97WL0_SULSO 1 213 SEQADV 2QZC GLY A 0 UNP Q97WL0 EXPRESSION TAG SEQADV 2QZC GLY B 0 UNP Q97WL0 EXPRESSION TAG SEQRES 1 A 214 GLY MSE SER ILE VAL GLY ASN VAL GLU ASN LEU ILE ASN SEQRES 2 A 214 GLY VAL GLY GLU LEU TRP ASN LYS TYR VAL LYS HIS GLU SEQRES 3 A 214 PHE ILE LEU LYS MSE ARG ASP GLY SER LEU PRO LEU ASP SEQRES 4 A 214 ILE PHE ARG TYR TYR LEU ILE GLN ASP GLY LYS TYR VAL SEQRES 5 A 214 GLU ASP MSE LEU ARG ALA LEU LEU ILE ALA SER SER LYS SEQRES 6 A 214 GLY PRO ILE ASP LYS VAL THR LYS ILE LEU ASN LEU VAL SEQRES 7 A 214 PHE SER SER ARG ASP LYS GLY LEU GLU THR HIS GLY LYS SEQRES 8 A 214 LEU TYR SER LYS LEU ASP ILE SER ARG ASP VAL ILE VAL SEQRES 9 A 214 LYS THR GLY TYR ASN LEU ILE ASN TYR ALA TYR THR ARG SEQRES 10 A 214 HIS LEU TYR TYR TYR ALA ASN LEU ASP TRP ASN LYS PHE SEQRES 11 A 214 LEU VAL ALA TRP THR PRO CYS MSE PHE GLY TYR SER ILE SEQRES 12 A 214 VAL GLY ASP TYR VAL ILE ASP SER PRO ASN GLU VAL TYR SEQRES 13 A 214 LYS THR TRP ALA SER PHE TYR ALA SER THR GLU TYR LYS SEQRES 14 A 214 LYS ARG ILE GLU ALA ILE LEU TYR ALA LEU ASP GLU VAL SEQRES 15 A 214 SER ILE THR GLU ASP LEU LEU ASN ILE PHE ILE ASN SER SEQRES 16 A 214 VAL ARG PHE GLU ILE GLY PHE TRP ASP ALA SER LEU ARG SEQRES 17 A 214 LYS ASP PRO THR VAL TYR SEQRES 1 B 214 GLY MSE SER ILE VAL GLY ASN VAL GLU ASN LEU ILE ASN SEQRES 2 B 214 GLY VAL GLY GLU LEU TRP ASN LYS TYR VAL LYS HIS GLU SEQRES 3 B 214 PHE ILE LEU LYS MSE ARG ASP GLY SER LEU PRO LEU ASP SEQRES 4 B 214 ILE PHE ARG TYR TYR LEU ILE GLN ASP GLY LYS TYR VAL SEQRES 5 B 214 GLU ASP MSE LEU ARG ALA LEU LEU ILE ALA SER SER LYS SEQRES 6 B 214 GLY PRO ILE ASP LYS VAL THR LYS ILE LEU ASN LEU VAL SEQRES 7 B 214 PHE SER SER ARG ASP LYS GLY LEU GLU THR HIS GLY LYS SEQRES 8 B 214 LEU TYR SER LYS LEU ASP ILE SER ARG ASP VAL ILE VAL SEQRES 9 B 214 LYS THR GLY TYR ASN LEU ILE ASN TYR ALA TYR THR ARG SEQRES 10 B 214 HIS LEU TYR TYR TYR ALA ASN LEU ASP TRP ASN LYS PHE SEQRES 11 B 214 LEU VAL ALA TRP THR PRO CYS MSE PHE GLY TYR SER ILE SEQRES 12 B 214 VAL GLY ASP TYR VAL ILE ASP SER PRO ASN GLU VAL TYR SEQRES 13 B 214 LYS THR TRP ALA SER PHE TYR ALA SER THR GLU TYR LYS SEQRES 14 B 214 LYS ARG ILE GLU ALA ILE LEU TYR ALA LEU ASP GLU VAL SEQRES 15 B 214 SER ILE THR GLU ASP LEU LEU ASN ILE PHE ILE ASN SER SEQRES 16 B 214 VAL ARG PHE GLU ILE GLY PHE TRP ASP ALA SER LEU ARG SEQRES 17 B 214 LYS ASP PRO THR VAL TYR MODRES 2QZC MSE A 30 MET SELENOMETHIONINE MODRES 2QZC MSE A 54 MET SELENOMETHIONINE MODRES 2QZC MSE A 137 MET SELENOMETHIONINE MODRES 2QZC MSE B 30 MET SELENOMETHIONINE MODRES 2QZC MSE B 54 MET SELENOMETHIONINE MODRES 2QZC MSE B 137 MET SELENOMETHIONINE HET MSE A 30 8 HET MSE A 54 8 HET MSE A 137 8 HET MSE B 30 8 HET MSE B 54 8 HET MSE B 137 8 HET IMD A 214 5 HET GOL A 215 6 HET GOL A 216 6 HET GOL A 217 6 HET GOL A 218 6 HET GOL A 219 6 HET IMD B 214 5 HET GOL B 215 6 HET GOL B 216 6 HETNAM MSE SELENOMETHIONINE HETNAM IMD IMIDAZOLE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 IMD 2(C3 H5 N2 1+) FORMUL 4 GOL 7(C3 H8 O3) FORMUL 12 HOH *312(H2 O) HELIX 1 1 VAL A 4 VAL A 14 1 11 HELIX 2 2 GLU A 16 LYS A 23 1 8 HELIX 3 3 HIS A 24 ASP A 32 1 9 HELIX 4 4 PRO A 36 SER A 63 1 28 HELIX 5 5 PRO A 66 PHE A 78 1 13 HELIX 6 6 LYS A 83 LEU A 95 1 13 HELIX 7 7 SER A 98 THR A 105 1 8 HELIX 8 8 ASN A 108 ASP A 125 1 18 HELIX 9 9 ASP A 125 ILE A 148 1 24 HELIX 10 10 ASN A 152 SER A 164 1 13 HELIX 11 11 SER A 164 ASP A 179 1 16 HELIX 12 12 THR A 184 LYS A 208 1 25 HELIX 13 13 GLY B 5 VAL B 14 1 10 HELIX 14 14 GLU B 16 LYS B 23 1 8 HELIX 15 15 HIS B 24 GLY B 33 1 10 HELIX 16 16 PRO B 36 SER B 63 1 28 HELIX 17 17 PRO B 66 PHE B 78 1 13 HELIX 18 18 GLU B 86 LEU B 95 1 10 HELIX 19 19 SER B 98 THR B 105 1 8 HELIX 20 20 ASN B 108 ASN B 123 1 16 HELIX 21 21 ASP B 125 ILE B 148 1 24 HELIX 22 22 ASN B 152 SER B 164 1 13 HELIX 23 23 SER B 164 ASP B 179 1 16 HELIX 24 24 THR B 184 ARG B 207 1 24 LINK C LYS A 29 N MSE A 30 1555 1555 1.34 LINK C MSE A 30 N ARG A 31 1555 1555 1.33 LINK C ASP A 53 N MSE A 54 1555 1555 1.32 LINK C MSE A 54 N LEU A 55 1555 1555 1.32 LINK C CYS A 136 N MSE A 137 1555 1555 1.32 LINK C MSE A 137 N PHE A 138 1555 1555 1.31 LINK C LYS B 29 N MSE B 30 1555 1555 1.34 LINK C MSE B 30 N ARG B 31 1555 1555 1.34 LINK C ASP B 53 N MSE B 54 1555 1555 1.33 LINK C MSE B 54 N LEU B 55 1555 1555 1.33 LINK C CYS B 136 N MSE B 137 1555 1555 1.33 LINK C MSE B 137 N PHE B 138 1555 1555 1.33 SITE 1 AC1 7 ASP A 47 TYR A 50 CYS A 136 TYR A 140 SITE 2 AC1 7 GLU A 198 PHE A 201 GOL A 215 SITE 1 AC2 7 ASP B 47 TYR B 50 CYS B 136 TYR B 140 SITE 2 AC2 7 GLU B 198 PHE B 201 GOL B 215 SITE 1 AC3 9 ASP A 47 VAL A 51 CYS A 136 MSE A 137 SITE 2 AC3 9 TYR A 140 TYR A 162 TYR A 167 IMD A 214 SITE 3 AC3 9 HOH A 425 SITE 1 AC4 4 TYR A 120 TYR A 121 LYS A 128 HOH A 386 SITE 1 AC5 6 PHE A 138 SER A 141 ILE A 142 ASP A 145 SITE 2 AC5 6 LYS A 168 HOH A 423 SITE 1 AC6 3 SER A 98 ARG A 99 HOH A 280 SITE 1 AC7 4 GLU A 25 LYS A 29 ASP A 32 SER A 34 SITE 1 AC8 7 ASP B 47 VAL B 51 CYS B 136 TYR B 162 SITE 2 AC8 7 TYR B 167 IMD B 214 HOH B 281 SITE 1 AC9 5 TYR B 121 LYS B 128 HOH B 249 HOH B 254 SITE 2 AC9 5 HOH B 298 CRYST1 88.862 88.862 135.760 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007370 0.00000