HEADER HYDROLASE/HYDROLASE INHIBITOR 17-AUG-07 2QZX TITLE SECRETED ASPARTIC PROTEINASE (SAP) 5 FROM CANDIDA ALBICANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CANDIDAPEPSIN-5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ASPARTATE PROTEASE 5, ACP 5, SECRETED ASPARTIC PROTEASE 5; COMPND 5 EC: 3.4.23.24; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPSTATIN; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: STREPTOMYCES ARGENTEOLUS SUBSP. TOYONAKENSIS; SOURCE 10 ORGANISM_TAXID: 285516 KEYWDS ASPARTIC PROTEINASE, CANDIDA ALBICANS, ASPARTYL PROTEASE, CLEAVAGE ON KEYWDS 2 PAIR OF BASIC RESIDUES, GLYCOPROTEIN, PROTEASE, SECRETED, ZYMOGEN, KEYWDS 3 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.H.LEE,E.RUGE,C.BORELLI,K.MASKOS,R.HUBER REVDAT 8 30-OCT-24 2QZX 1 REMARK REVDAT 7 15-NOV-23 2QZX 1 REMARK REVDAT 6 30-AUG-23 2QZX 1 REMARK LINK REVDAT 5 25-OCT-17 2QZX 1 REMARK REVDAT 4 13-JUL-11 2QZX 1 VERSN REVDAT 3 24-FEB-09 2QZX 1 VERSN REVDAT 2 05-AUG-08 2QZX 1 JRNL REVDAT 1 08-JUL-08 2QZX 0 JRNL AUTH C.BORELLI,E.RUGE,J.H.LEE,M.SCHALLER,A.VOGELSANG,M.MONOD, JRNL AUTH 2 H.C.KORTING,R.HUBER,K.MASKOS JRNL TITL X-RAY STRUCTURES OF SAP1 AND SAP5: STRUCTURAL COMPARISON OF JRNL TITL 2 THE SECRETED ASPARTIC PROTEINASES FROM CANDIDA ALBICANS. JRNL REF PROTEINS V. 72 1308 2008 JRNL REFN ISSN 0887-3585 JRNL PMID 18384081 JRNL DOI 10.1002/PROT.22021 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1476.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 26393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1263 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5342 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.47700 REMARK 3 B22 (A**2) : -3.47700 REMARK 3 B33 (A**2) : 6.95500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.377 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.068 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.260 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.878 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.265 ; 5.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 13.75 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP. REMARK 3 PARAMETER FILE 2 : WATER_REP.PA REMARK 3 PARAMETER FILE 3 : DRGCNS-MF-INH-MOV.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : DRGCNS-MF-INH-MOV.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2QZX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000044255. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : SI(III) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26813 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.45800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ZAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8000, 8% ETHYLENE GLYCOL, 0.1 REMARK 280 M HEPES/NAOH, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.00250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.09800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.09800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.50125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.09800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.09800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 136.50375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.09800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.09800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.50125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.09800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.09800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 136.50375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.00250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2179 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE PEPSTATIN IS OLIGOPEPTIDE, A MEMBER OF ENZYME INHIBITOR CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: PEPSTATIN REMARK 400 CHAIN: C, D REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 11 -9.91 78.08 REMARK 500 ASP A 54 109.08 -56.64 REMARK 500 LYS A 55 -160.67 -61.66 REMARK 500 ASP A 86 1.65 -65.42 REMARK 500 LYS A 121 -171.47 -176.85 REMARK 500 ASN A 160 -159.07 -73.57 REMARK 500 LYS A 176 -17.37 -40.93 REMARK 500 ARG A 204 44.89 37.99 REMARK 500 ALA A 210 -54.35 -124.91 REMARK 500 ILE A 223 -156.67 -110.63 REMARK 500 ARG A 297 39.05 -74.75 REMARK 500 ALA B 11 -8.05 84.62 REMARK 500 ILE B 12 9.24 -152.56 REMARK 500 THR B 13 -164.20 -167.71 REMARK 500 ASN B 44 42.00 -109.00 REMARK 500 LYS B 55 149.26 -172.26 REMARK 500 ASN B 77 57.95 38.11 REMARK 500 SER B 130 -3.49 -58.39 REMARK 500 PHE B 135 -154.57 -151.84 REMARK 500 ALA B 153 91.59 -69.95 REMARK 500 ASN B 160 -160.84 -61.95 REMARK 500 ARG B 204 55.38 38.14 REMARK 500 ALA B 210 -47.00 -141.34 REMARK 500 ASN B 211 56.72 35.87 REMARK 500 ILE B 223 -147.93 -107.18 REMARK 500 ARG B 297 46.45 -84.44 REMARK 500 ASN B 309 12.88 -68.49 REMARK 500 PHE B 310 -60.95 -121.57 REMARK 500 ASP B 337 81.46 -158.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 STA C 2004 ALA C 2005 -112.86 REMARK 500 STA D 2004 ALA D 2005 -117.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 STA C2004 30.57 REMARK 500 STA D2004 29.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 HOH A 2179 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF PEPSTATIN REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF PEPSTATIN REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QZW RELATED DB: PDB DBREF 2QZX A 1 342 UNP P43094 CARP5_CANAL 77 418 DBREF 2QZX B 1 342 UNP P43094 CARP5_CANAL 77 418 DBREF 2QZX C 2001 2006 PDB 2QZX 2QZX 2001 2006 DBREF 2QZX D 2001 2006 PDB 2QZX 2QZX 2001 2006 SEQRES 1 A 342 GLY PRO VAL ALA VAL THR LEU HIS ASN GLU ALA ILE THR SEQRES 2 A 342 TYR THR ALA ASP ILE THR VAL GLY SER ASP ASN GLN LYS SEQRES 3 A 342 LEU ASN VAL ILE VAL ASP THR GLY SER SER ASP LEU TRP SEQRES 4 A 342 ILE PRO ASP SER ASN VAL ILE CYS ILE PRO LYS TRP ARG SEQRES 5 A 342 GLY ASP LYS GLY ASP PHE CYS LYS SER ALA GLY SER TYR SEQRES 6 A 342 SER PRO ALA SER SER ARG THR SER GLN ASN LEU ASN THR SEQRES 7 A 342 ARG PHE ASP ILE LYS TYR GLY ASP GLY SER TYR ALA LYS SEQRES 8 A 342 GLY LYS LEU TYR LYS ASP THR VAL GLY ILE GLY GLY VAL SEQRES 9 A 342 SER VAL ARG ASP GLN LEU PHE ALA ASN VAL TRP SER THR SEQRES 10 A 342 SER ALA ARG LYS GLY ILE LEU GLY ILE GLY PHE GLN SER SEQRES 11 A 342 GLY GLU ALA THR GLU PHE ASP TYR ASP ASN LEU PRO ILE SEQRES 12 A 342 SER LEU ARG ASN GLN GLY ILE ILE GLY LYS ALA ALA TYR SEQRES 13 A 342 SER LEU TYR LEU ASN SER ALA GLU ALA SER THR GLY GLN SEQRES 14 A 342 ILE ILE PHE GLY GLY ILE ASP LYS ALA LYS TYR SER GLY SEQRES 15 A 342 SER LEU VAL ASP LEU PRO ILE THR SER GLU LYS LYS LEU SEQRES 16 A 342 THR VAL GLY LEU ARG SER VAL ASN VAL ARG GLY ARG ASN SEQRES 17 A 342 VAL ASP ALA ASN THR ASN VAL LEU LEU ASP SER GLY THR SEQRES 18 A 342 THR ILE SER TYR PHE THR ARG SER ILE VAL ARG ASN ILE SEQRES 19 A 342 LEU TYR ALA ILE GLY ALA GLN MET LYS PHE ASP SER ALA SEQRES 20 A 342 GLY ASN LYS VAL TYR VAL ALA ASP CYS LYS THR SER GLY SEQRES 21 A 342 THR ILE ASP PHE GLN PHE GLY ASN ASN LEU LYS ILE SER SEQRES 22 A 342 VAL PRO VAL SER GLU PHE LEU PHE GLN THR TYR TYR THR SEQRES 23 A 342 SER GLY LYS PRO PHE PRO LYS CYS GLU VAL ARG ILE ARG SEQRES 24 A 342 GLU SER GLU ASP ASN ILE LEU GLY ASP ASN PHE LEU ARG SEQRES 25 A 342 SER ALA TYR VAL VAL TYR ASN LEU ASP ASP LYS LYS ILE SEQRES 26 A 342 SER MET ALA PRO VAL LYS TYR THR SER GLU SER ASP ILE SEQRES 27 A 342 VAL ALA ILE ASN SEQRES 1 B 342 GLY PRO VAL ALA VAL THR LEU HIS ASN GLU ALA ILE THR SEQRES 2 B 342 TYR THR ALA ASP ILE THR VAL GLY SER ASP ASN GLN LYS SEQRES 3 B 342 LEU ASN VAL ILE VAL ASP THR GLY SER SER ASP LEU TRP SEQRES 4 B 342 ILE PRO ASP SER ASN VAL ILE CYS ILE PRO LYS TRP ARG SEQRES 5 B 342 GLY ASP LYS GLY ASP PHE CYS LYS SER ALA GLY SER TYR SEQRES 6 B 342 SER PRO ALA SER SER ARG THR SER GLN ASN LEU ASN THR SEQRES 7 B 342 ARG PHE ASP ILE LYS TYR GLY ASP GLY SER TYR ALA LYS SEQRES 8 B 342 GLY LYS LEU TYR LYS ASP THR VAL GLY ILE GLY GLY VAL SEQRES 9 B 342 SER VAL ARG ASP GLN LEU PHE ALA ASN VAL TRP SER THR SEQRES 10 B 342 SER ALA ARG LYS GLY ILE LEU GLY ILE GLY PHE GLN SER SEQRES 11 B 342 GLY GLU ALA THR GLU PHE ASP TYR ASP ASN LEU PRO ILE SEQRES 12 B 342 SER LEU ARG ASN GLN GLY ILE ILE GLY LYS ALA ALA TYR SEQRES 13 B 342 SER LEU TYR LEU ASN SER ALA GLU ALA SER THR GLY GLN SEQRES 14 B 342 ILE ILE PHE GLY GLY ILE ASP LYS ALA LYS TYR SER GLY SEQRES 15 B 342 SER LEU VAL ASP LEU PRO ILE THR SER GLU LYS LYS LEU SEQRES 16 B 342 THR VAL GLY LEU ARG SER VAL ASN VAL ARG GLY ARG ASN SEQRES 17 B 342 VAL ASP ALA ASN THR ASN VAL LEU LEU ASP SER GLY THR SEQRES 18 B 342 THR ILE SER TYR PHE THR ARG SER ILE VAL ARG ASN ILE SEQRES 19 B 342 LEU TYR ALA ILE GLY ALA GLN MET LYS PHE ASP SER ALA SEQRES 20 B 342 GLY ASN LYS VAL TYR VAL ALA ASP CYS LYS THR SER GLY SEQRES 21 B 342 THR ILE ASP PHE GLN PHE GLY ASN ASN LEU LYS ILE SER SEQRES 22 B 342 VAL PRO VAL SER GLU PHE LEU PHE GLN THR TYR TYR THR SEQRES 23 B 342 SER GLY LYS PRO PHE PRO LYS CYS GLU VAL ARG ILE ARG SEQRES 24 B 342 GLU SER GLU ASP ASN ILE LEU GLY ASP ASN PHE LEU ARG SEQRES 25 B 342 SER ALA TYR VAL VAL TYR ASN LEU ASP ASP LYS LYS ILE SEQRES 26 B 342 SER MET ALA PRO VAL LYS TYR THR SER GLU SER ASP ILE SEQRES 27 B 342 VAL ALA ILE ASN SEQRES 1 C 6 IVA VAL VAL STA ALA STA SEQRES 1 D 6 IVA VAL VAL STA ALA STA HET IVA C2001 6 HET STA C2004 11 HET STA C2006 12 HET IVA D2001 6 HET STA D2004 11 HET STA D2006 12 HETNAM IVA ISOVALERIC ACID HETNAM STA STATINE FORMUL 3 IVA 2(C5 H10 O2) FORMUL 3 STA 4(C8 H17 N O3) FORMUL 5 HOH *370(H2 O) HELIX 1 1 ASP A 57 SER A 61 5 5 HELIX 2 2 SER A 66 SER A 70 5 5 HELIX 3 3 PHE A 128 GLU A 132 5 5 HELIX 4 4 ASN A 139 GLN A 147 1 9 HELIX 5 5 THR A 227 GLY A 239 1 13 HELIX 6 6 GLY A 307 ARG A 312 1 6 HELIX 7 7 SER B 66 SER B 70 5 5 HELIX 8 8 PHE B 128 GLU B 132 5 5 HELIX 9 9 ASN B 139 GLN B 147 1 9 HELIX 10 10 ALA B 177 TYR B 179 5 3 HELIX 11 11 THR B 227 GLY B 239 1 13 HELIX 12 12 GLY B 307 ARG B 312 1 6 SHEET 1 A 9 GLN A 74 LYS A 83 0 SHEET 2 A 9 TYR A 89 ILE A 101 -1 O GLY A 92 N PHE A 80 SHEET 3 A 9 TYR A 14 VAL A 20 -1 N THR A 19 O GLY A 100 SHEET 4 A 9 VAL A 3 ASN A 9 -1 N HIS A 8 O THR A 15 SHEET 5 A 9 THR A 166 PHE A 171 -1 O GLY A 167 N LEU A 7 SHEET 6 A 9 ALA A 154 TYR A 158 -1 N TYR A 158 O GLN A 168 SHEET 7 A 9 ALA A 314 ASN A 319 -1 O VAL A 316 N LEU A 157 SHEET 8 A 9 LYS A 324 PRO A 329 -1 O SER A 326 N VAL A 317 SHEET 9 A 9 VAL A 184 PRO A 187 -1 N LEU A 186 O ILE A 325 SHEET 1 B13 GLN A 74 LYS A 83 0 SHEET 2 B13 TYR A 89 ILE A 101 -1 O GLY A 92 N PHE A 80 SHEET 3 B13 VAL A 104 THR A 117 -1 O ASN A 113 N LYS A 93 SHEET 4 B13 LEU A 38 CYS A 47 1 N ASP A 42 O VAL A 114 SHEET 5 B13 ILE A 123 GLY A 125 -1 O ILE A 123 N TRP A 39 SHEET 6 B13 GLN A 25 ASP A 32 1 N ILE A 30 O LEU A 124 SHEET 7 B13 TYR A 14 VAL A 20 -1 N ALA A 16 O VAL A 29 SHEET 8 B13 VAL A 3 ASN A 9 -1 N HIS A 8 O THR A 15 SHEET 9 B13 THR A 166 PHE A 171 -1 O GLY A 167 N LEU A 7 SHEET 10 B13 ALA A 154 TYR A 158 -1 N TYR A 158 O GLN A 168 SHEET 11 B13 ALA A 314 ASN A 319 -1 O VAL A 316 N LEU A 157 SHEET 12 B13 LYS A 324 PRO A 329 -1 O SER A 326 N VAL A 317 SHEET 13 B13 VAL A 184 PRO A 187 -1 N LEU A 186 O ILE A 325 SHEET 1 C 2 GLY A 173 ASP A 175 0 SHEET 2 C 2 ILE A 338 ALA A 340 -1 O VAL A 339 N ILE A 174 SHEET 1 D 5 LEU A 270 PRO A 275 0 SHEET 2 D 5 THR A 261 PHE A 266 -1 N PHE A 266 O LEU A 270 SHEET 3 D 5 THR A 195 VAL A 203 -1 N ASN A 202 O ASP A 263 SHEET 4 D 5 ARG A 206 LEU A 217 -1 O ARG A 206 N VAL A 203 SHEET 5 D 5 ILE A 305 LEU A 306 1 O LEU A 306 N LEU A 216 SHEET 1 E 2 SER A 224 PHE A 226 0 SHEET 2 E 2 ILE A 298 GLU A 300 1 O ARG A 299 N SER A 224 SHEET 1 F 4 GLN A 241 PHE A 244 0 SHEET 2 F 4 LYS A 250 ALA A 254 -1 O VAL A 251 N LYS A 243 SHEET 3 F 4 CYS A 294 VAL A 296 -1 O CYS A 294 N ALA A 254 SHEET 4 F 4 LEU A 280 PHE A 281 -1 N PHE A 281 O GLU A 295 SHEET 1 G 9 GLN B 74 LYS B 83 0 SHEET 2 G 9 TYR B 89 ILE B 101 -1 O GLY B 92 N PHE B 80 SHEET 3 G 9 TYR B 14 VAL B 20 -1 N THR B 19 O GLY B 100 SHEET 4 G 9 VAL B 3 ASN B 9 -1 N HIS B 8 O THR B 15 SHEET 5 G 9 THR B 166 PHE B 171 -1 O GLY B 167 N LEU B 7 SHEET 6 G 9 ALA B 154 TYR B 158 -1 N TYR B 158 O GLN B 168 SHEET 7 G 9 ALA B 314 ASN B 319 -1 O VAL B 316 N LEU B 157 SHEET 8 G 9 LYS B 324 PRO B 329 -1 O SER B 326 N VAL B 317 SHEET 9 G 9 VAL B 184 PRO B 187 -1 N LEU B 186 O ILE B 325 SHEET 1 H13 GLN B 74 LYS B 83 0 SHEET 2 H13 TYR B 89 ILE B 101 -1 O GLY B 92 N PHE B 80 SHEET 3 H13 VAL B 104 THR B 117 -1 O ASN B 113 N LYS B 93 SHEET 4 H13 LEU B 38 CYS B 47 1 N ILE B 46 O TRP B 115 SHEET 5 H13 ILE B 123 GLY B 125 -1 O ILE B 123 N TRP B 39 SHEET 6 H13 GLN B 25 ASP B 32 1 N ILE B 30 O LEU B 124 SHEET 7 H13 TYR B 14 VAL B 20 -1 N ILE B 18 O LEU B 27 SHEET 8 H13 VAL B 3 ASN B 9 -1 N HIS B 8 O THR B 15 SHEET 9 H13 THR B 166 PHE B 171 -1 O GLY B 167 N LEU B 7 SHEET 10 H13 ALA B 154 TYR B 158 -1 N TYR B 158 O GLN B 168 SHEET 11 H13 ALA B 314 ASN B 319 -1 O VAL B 316 N LEU B 157 SHEET 12 H13 LYS B 324 PRO B 329 -1 O SER B 326 N VAL B 317 SHEET 13 H13 VAL B 184 PRO B 187 -1 N LEU B 186 O ILE B 325 SHEET 1 I 2 GLY B 173 ASP B 175 0 SHEET 2 I 2 ILE B 338 ALA B 340 -1 O VAL B 339 N ILE B 174 SHEET 1 J 7 LEU B 270 PRO B 275 0 SHEET 2 J 7 THR B 261 PHE B 266 -1 N PHE B 266 O LEU B 270 SHEET 3 J 7 THR B 195 VAL B 203 -1 N ASN B 202 O ASP B 263 SHEET 4 J 7 ARG B 206 LEU B 217 -1 O THR B 213 N LEU B 198 SHEET 5 J 7 ILE B 305 LEU B 306 1 O LEU B 306 N LEU B 216 SHEET 6 J 7 SER B 224 PHE B 226 -1 N TYR B 225 O ILE B 305 SHEET 7 J 7 ILE B 298 GLU B 300 1 O ARG B 299 N SER B 224 SHEET 1 K 4 GLN B 241 PHE B 244 0 SHEET 2 K 4 LYS B 250 ALA B 254 -1 O VAL B 253 N GLN B 241 SHEET 3 K 4 CYS B 294 VAL B 296 -1 O CYS B 294 N ALA B 254 SHEET 4 K 4 LEU B 280 PHE B 281 -1 N PHE B 281 O GLU B 295 SSBOND 1 CYS A 47 CYS A 59 1555 1555 2.04 SSBOND 2 CYS A 256 CYS A 294 1555 1555 2.04 SSBOND 3 CYS B 47 CYS B 59 1555 1555 2.04 SSBOND 4 CYS B 256 CYS B 294 1555 1555 2.02 LINK C IVA C2001 N VAL C2002 1555 1555 1.33 LINK C VAL C2003 N STA C2004 1555 1555 1.33 LINK C STA C2004 N ALA C2005 1555 1555 1.33 LINK C ALA C2005 N STA C2006 1555 1555 1.34 LINK C IVA D2001 N VAL D2002 1555 1555 1.33 LINK C VAL D2003 N STA D2004 1555 1555 1.33 LINK C STA D2004 N ALA D2005 1555 1555 1.33 LINK C ALA D2005 N STA D2006 1555 1555 1.33 SITE 1 AC1 15 ASP A 32 GLY A 34 TRP A 51 LYS A 83 SITE 2 AC1 15 TYR A 84 GLY A 85 ASP A 86 ILE A 123 SITE 3 AC1 15 ASP A 218 GLY A 220 THR A 221 THR A 222 SITE 4 AC1 15 TYR A 225 HOH C2036 HOH C2167 SITE 1 AC2 20 ILE B 12 ASP B 32 GLY B 34 TRP B 51 SITE 2 AC2 20 LYS B 83 TYR B 84 GLY B 85 ASP B 86 SITE 3 AC2 20 LYS B 193 ASP B 218 GLY B 220 THR B 221 SITE 4 AC2 20 THR B 222 TYR B 225 ARG B 297 ARG B 299 SITE 5 AC2 20 HOH B3035 HOH B3058 HOH B3074 HOH B3096 CRYST1 92.196 92.196 182.005 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010846 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005494 0.00000