data_2R01 # _entry.id 2R01 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R01 pdb_00002r01 10.2210/pdb2r01/pdb RCSB RCSB044259 ? ? WWPDB D_1000044259 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 376232 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2R01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-08-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative FMN-dependent nitroreductase (NP_661249.1) from Chlorobium tepidum TLS at 1.15 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2R01 _cell.length_a 60.030 _cell.length_b 64.720 _cell.length_c 48.010 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2R01 _symmetry.Int_Tables_number 18 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nitroreductase family protein' 23402.090 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 1 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 6 water nat water 18.015 227 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)EGSLSRGVEI(MSE)KLRELVARSRSIRRFDEHVAVNDATLRDLVELVCYTPSAANRQLLRFLPVTGAD(MSE) SDKVFPCLKWAGYLEDWPGPEPGERPAAALV(MSE)LCRNEDLPGAACDSGIAAQTI(MSE)LGAAEKELGGCIVAAIDR ERL(MSE)ASLGIPDAWTVLLVIALGKPAETVVIDQIKPGDDIRYWRDKHGIHHVPKRQVDELLVTAEQLRERG ; _entity_poly.pdbx_seq_one_letter_code_can ;GMEGSLSRGVEIMKLRELVARSRSIRRFDEHVAVNDATLRDLVELVCYTPSAANRQLLRFLPVTGADMSDKVFPCLKWAG YLEDWPGPEPGERPAAALVMLCRNEDLPGAACDSGIAAQTIMLGAAEKELGGCIVAAIDRERLMASLGIPDAWTVLLVIA LGKPAETVVIDQIKPGDDIRYWRDKHGIHHVPKRQVDELLVTAEQLRERG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 376232 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLU n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 SER n 1 8 ARG n 1 9 GLY n 1 10 VAL n 1 11 GLU n 1 12 ILE n 1 13 MSE n 1 14 LYS n 1 15 LEU n 1 16 ARG n 1 17 GLU n 1 18 LEU n 1 19 VAL n 1 20 ALA n 1 21 ARG n 1 22 SER n 1 23 ARG n 1 24 SER n 1 25 ILE n 1 26 ARG n 1 27 ARG n 1 28 PHE n 1 29 ASP n 1 30 GLU n 1 31 HIS n 1 32 VAL n 1 33 ALA n 1 34 VAL n 1 35 ASN n 1 36 ASP n 1 37 ALA n 1 38 THR n 1 39 LEU n 1 40 ARG n 1 41 ASP n 1 42 LEU n 1 43 VAL n 1 44 GLU n 1 45 LEU n 1 46 VAL n 1 47 CYS n 1 48 TYR n 1 49 THR n 1 50 PRO n 1 51 SER n 1 52 ALA n 1 53 ALA n 1 54 ASN n 1 55 ARG n 1 56 GLN n 1 57 LEU n 1 58 LEU n 1 59 ARG n 1 60 PHE n 1 61 LEU n 1 62 PRO n 1 63 VAL n 1 64 THR n 1 65 GLY n 1 66 ALA n 1 67 ASP n 1 68 MSE n 1 69 SER n 1 70 ASP n 1 71 LYS n 1 72 VAL n 1 73 PHE n 1 74 PRO n 1 75 CYS n 1 76 LEU n 1 77 LYS n 1 78 TRP n 1 79 ALA n 1 80 GLY n 1 81 TYR n 1 82 LEU n 1 83 GLU n 1 84 ASP n 1 85 TRP n 1 86 PRO n 1 87 GLY n 1 88 PRO n 1 89 GLU n 1 90 PRO n 1 91 GLY n 1 92 GLU n 1 93 ARG n 1 94 PRO n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 LEU n 1 99 VAL n 1 100 MSE n 1 101 LEU n 1 102 CYS n 1 103 ARG n 1 104 ASN n 1 105 GLU n 1 106 ASP n 1 107 LEU n 1 108 PRO n 1 109 GLY n 1 110 ALA n 1 111 ALA n 1 112 CYS n 1 113 ASP n 1 114 SER n 1 115 GLY n 1 116 ILE n 1 117 ALA n 1 118 ALA n 1 119 GLN n 1 120 THR n 1 121 ILE n 1 122 MSE n 1 123 LEU n 1 124 GLY n 1 125 ALA n 1 126 ALA n 1 127 GLU n 1 128 LYS n 1 129 GLU n 1 130 LEU n 1 131 GLY n 1 132 GLY n 1 133 CYS n 1 134 ILE n 1 135 VAL n 1 136 ALA n 1 137 ALA n 1 138 ILE n 1 139 ASP n 1 140 ARG n 1 141 GLU n 1 142 ARG n 1 143 LEU n 1 144 MSE n 1 145 ALA n 1 146 SER n 1 147 LEU n 1 148 GLY n 1 149 ILE n 1 150 PRO n 1 151 ASP n 1 152 ALA n 1 153 TRP n 1 154 THR n 1 155 VAL n 1 156 LEU n 1 157 LEU n 1 158 VAL n 1 159 ILE n 1 160 ALA n 1 161 LEU n 1 162 GLY n 1 163 LYS n 1 164 PRO n 1 165 ALA n 1 166 GLU n 1 167 THR n 1 168 VAL n 1 169 VAL n 1 170 ILE n 1 171 ASP n 1 172 GLN n 1 173 ILE n 1 174 LYS n 1 175 PRO n 1 176 GLY n 1 177 ASP n 1 178 ASP n 1 179 ILE n 1 180 ARG n 1 181 TYR n 1 182 TRP n 1 183 ARG n 1 184 ASP n 1 185 LYS n 1 186 HIS n 1 187 GLY n 1 188 ILE n 1 189 HIS n 1 190 HIS n 1 191 VAL n 1 192 PRO n 1 193 LYS n 1 194 ARG n 1 195 GLN n 1 196 VAL n 1 197 ASP n 1 198 GLU n 1 199 LEU n 1 200 LEU n 1 201 VAL n 1 202 THR n 1 203 ALA n 1 204 GLU n 1 205 GLN n 1 206 LEU n 1 207 ARG n 1 208 GLU n 1 209 ARG n 1 210 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Chlorobaculum _entity_src_gen.pdbx_gene_src_gene 'NP_661249.1, CT0345' _entity_src_gen.gene_src_species 'Chlorobaculum tepidum' _entity_src_gen.gene_src_strain 'TLS, DSM 12025' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chlorobium tepidum TLS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 194439 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 49652 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8KFI1_CHLTE _struct_ref.pdbx_db_accession Q8KFI1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEGSLSRGVEIMKLRELVARSRSIRRFDEHVAVNDATLRDLVELVCYTPSAANRQLLRFLPVTGADMSDKVFPCLKWAGY LEDWPGPEPGERPAAALVMLCRNEDLPGAACDSGIAAQTIMLGAAEKELGGCIVAAIDRERLMASLGIPDAWTVLLVIAL GKPAETVVIDQIKPGDDIRYWRDKHGIHHVPKRQVDELLVTAEQLRERG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2R01 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 210 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8KFI1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 209 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 209 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2R01 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8KFI1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2R01 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 39.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M KH2PO4, 20.0% PEG 3350, No Buffer pH 4.7, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-07-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97949 1.0 3 0.97922 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97949, 0.97922' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2R01 _reflns.d_resolution_high 1.15 _reflns.d_resolution_low 28.490 _reflns.number_obs 66535 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_netI_over_sigmaI 10.200 _reflns.percent_possible_obs 98.800 _reflns.B_iso_Wilson_estimate 7.078 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 3.14 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.15 1.19 19061 ? ? 0.347 2.19 ? ? ? ? ? 96.6 ? 1 1.19 1.24 21240 ? ? 0.300 2.5 ? ? ? ? ? 98.4 ? 2 1.24 1.30 21561 ? ? 0.253 3.0 ? ? ? ? ? 98.7 ? 3 1.30 1.36 17960 ? ? 0.212 3.6 ? ? ? ? ? 99.2 ? 4 1.36 1.45 22035 ? ? 0.168 4.5 ? ? ? ? ? 99.3 ? 5 1.45 1.56 20551 ? ? 0.114 6.5 ? ? ? ? ? 99.4 ? 6 1.56 1.72 21727 ? ? 0.076 9.3 ? ? ? ? ? 99.6 ? 7 1.72 1.97 21490 ? ? 0.046 14.5 ? ? ? ? ? 99.6 ? 8 1.97 2.48 21439 ? ? 0.028 22.7 ? ? ? ? ? 99.3 ? 9 2.48 28.49 21760 ? ? 0.018 33.2 ? ? ? ? ? 98.3 ? 10 # _refine.entry_id 2R01 _refine.ls_d_res_high 1.150 _refine.ls_d_res_low 28.490 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.130 _refine.ls_number_reflns_obs 66493 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. ONE FMN, ONE PHOSPHATE, ONE CALCIUM ION AND ONE ETHYLENE GLYCOL MOLECULES WERE MODELED. 5. RESIDUES 1 TO 12 ARE DISORDERED AND NOT MODELED IN THE STRUCTURE. 6. ELECTRON DENSITY NEAR RESIDUES 39 AND 56 IS UNMODELED, WHICH MAY BE THE FRACTION OF POLYETHYLENE GLYCOL. ; _refine.ls_R_factor_all 0.149 _refine.ls_R_factor_R_work 0.148 _refine.ls_R_factor_R_free 0.165 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 3361 _refine.B_iso_mean 8.107 _refine.aniso_B[1][1] -0.540 _refine.aniso_B[2][2] 0.020 _refine.aniso_B[3][3] 0.530 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.pdbx_overall_ESU_R 0.035 _refine.pdbx_overall_ESU_R_Free 0.033 _refine.overall_SU_ML 0.021 _refine.overall_SU_B 0.986 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.149 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1478 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 227 _refine_hist.number_atoms_total 1746 _refine_hist.d_res_high 1.150 _refine_hist.d_res_low 28.490 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1649 0.010 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1105 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2268 1.454 2.002 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2690 0.916 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 216 5.270 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 66 26.818 22.424 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 264 9.308 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18 9.522 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 257 0.069 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1876 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 329 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 323 0.222 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1250 0.199 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 832 0.173 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 872 0.087 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 287 0.180 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 23 0.252 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 95 0.300 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 49 0.164 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1068 1.243 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 412 0.478 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1690 1.846 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 693 2.392 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 578 3.340 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3056 1.456 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 229 5.387 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2714 2.608 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.150 _refine_ls_shell.d_res_low 1.180 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.140 _refine_ls_shell.number_reflns_R_work 4501 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.210 _refine_ls_shell.R_factor_R_free 0.219 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 258 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 4759 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2R01 _struct.title 'Crystal structure of a putative fmn-dependent nitroreductase (ct0345) from chlorobium tepidum tls at 1.15 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase' _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 2R01 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 14 ? SER A 22 ? LYS A 13 SER A 21 1 ? 9 HELX_P HELX_P2 2 ASN A 35 ? CYS A 47 ? ASN A 34 CYS A 46 1 ? 13 HELX_P HELX_P3 3 SER A 51 ? ARG A 55 ? SER A 50 ARG A 54 5 ? 5 HELX_P HELX_P4 4 GLY A 65 ? LYS A 71 ? GLY A 64 LYS A 70 1 ? 7 HELX_P HELX_P5 5 VAL A 72 ? LEU A 76 ? VAL A 71 LEU A 75 5 ? 5 HELX_P HELX_P6 6 GLU A 105 ? GLY A 109 ? GLU A 104 GLY A 108 5 ? 5 HELX_P HELX_P7 7 ALA A 110 ? LYS A 128 ? ALA A 109 LYS A 127 1 ? 19 HELX_P HELX_P8 8 ASP A 139 ? GLY A 148 ? ASP A 138 GLY A 147 1 ? 10 HELX_P HELX_P9 9 GLN A 195 ? LEU A 200 ? GLN A 194 LEU A 199 1 ? 6 HELX_P HELX_P10 10 THR A 202 ? GLU A 208 ? THR A 201 GLU A 207 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 67 C ? ? ? 1_555 A MSE 68 N ? ? A ASP 66 A MSE 67 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 68 C ? ? ? 1_555 A SER 69 N A ? A MSE 67 A SER 68 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale3 covale both ? A MSE 68 C ? ? ? 1_555 A SER 69 N B ? A MSE 67 A SER 68 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A VAL 99 C ? ? ? 1_555 A MSE 100 N A ? A VAL 98 A MSE 99 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale5 covale both ? A VAL 99 C ? ? ? 1_555 A MSE 100 N B ? A VAL 98 A MSE 99 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale6 covale both ? A MSE 100 C B ? ? 1_555 A LEU 101 N ? ? A MSE 99 A LEU 100 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale7 covale both ? A MSE 100 C A ? ? 1_555 A LEU 101 N ? ? A MSE 99 A LEU 100 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A ILE 121 C ? ? ? 1_555 A MSE 122 N ? ? A ILE 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale9 covale both ? A MSE 122 C ? ? ? 1_555 A LEU 123 N ? ? A MSE 121 A LEU 122 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale both ? A LEU 143 C ? ? ? 1_555 A MSE 144 N ? ? A LEU 142 A MSE 143 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? A MSE 144 C ? ? ? 1_555 A ALA 145 N ? ? A MSE 143 A ALA 144 1_555 ? ? ? ? ? ? ? 1.327 ? ? metalc1 metalc ? ? A TRP 78 O ? ? ? 1_555 B CA . CA ? ? A TRP 77 A CA 210 1_555 ? ? ? ? ? ? ? 2.737 ? ? metalc2 metalc ? ? A ALA 79 O ? ? ? 1_555 B CA . CA ? ? A ALA 78 A CA 210 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc3 metalc ? ? A LEU 82 O ? ? ? 1_555 B CA . CA ? ? A LEU 81 A CA 210 1_555 ? ? ? ? ? ? ? 2.717 ? ? metalc4 metalc ? ? A TRP 85 O ? ? ? 1_555 B CA . CA ? ? A TRP 84 A CA 210 1_555 ? ? ? ? ? ? ? 2.680 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 210 A HOH 238 4_547 ? ? ? ? ? ? ? 2.791 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 210 A HOH 264 1_555 ? ? ? ? ? ? ? 2.865 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 210 A HOH 305 1_555 ? ? ? ? ? ? ? 2.920 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 59 ? THR A 64 ? ARG A 58 THR A 63 A 2 ALA A 96 ? ARG A 103 ? ALA A 95 ARG A 102 A 3 TRP A 153 ? GLY A 162 ? TRP A 152 GLY A 161 A 4 GLY A 131 ? VAL A 135 ? GLY A 130 VAL A 134 B 1 VAL A 168 ? ILE A 173 ? VAL A 167 ILE A 172 B 2 HIS A 189 ? ARG A 194 ? HIS A 188 ARG A 193 B 3 TRP A 182 ? ARG A 183 ? TRP A 181 ARG A 182 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 61 ? N LEU A 60 O VAL A 99 ? O VAL A 98 A 2 3 N CYS A 102 ? N CYS A 101 O THR A 154 ? O THR A 153 A 3 4 O ALA A 160 ? O ALA A 159 N CYS A 133 ? N CYS A 132 B 1 2 N ASP A 171 ? N ASP A 170 O LYS A 193 ? O LYS A 192 B 2 3 O HIS A 190 ? O HIS A 189 N TRP A 182 ? N TRP A 181 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 210 ? 7 'BINDING SITE FOR RESIDUE CA A 210' AC2 Software A PO4 211 ? 6 'BINDING SITE FOR RESIDUE PO4 A 211' AC3 Software A FMN 212 ? 24 'BINDING SITE FOR RESIDUE FMN A 212' AC4 Software A EDO 213 ? 6 'BINDING SITE FOR RESIDUE EDO A 213' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TRP A 78 ? TRP A 77 . ? 1_555 ? 2 AC1 7 ALA A 79 ? ALA A 78 . ? 1_555 ? 3 AC1 7 LEU A 82 ? LEU A 81 . ? 1_555 ? 4 AC1 7 TRP A 85 ? TRP A 84 . ? 1_555 ? 5 AC1 7 HOH F . ? HOH A 238 . ? 4_547 ? 6 AC1 7 HOH F . ? HOH A 264 . ? 1_555 ? 7 AC1 7 HOH F . ? HOH A 305 . ? 1_555 ? 8 AC2 6 ALA A 53 ? ALA A 52 . ? 2_655 ? 9 AC2 6 ALA A 79 ? ALA A 78 . ? 1_555 ? 10 AC2 6 GLY A 80 ? GLY A 79 . ? 1_555 ? 11 AC2 6 TYR A 181 ? TYR A 180 . ? 1_555 ? 12 AC2 6 FMN D . ? FMN A 212 . ? 1_555 ? 13 AC2 6 HOH F . ? HOH A 319 . ? 2_655 ? 14 AC3 24 ARG A 23 ? ARG A 22 . ? 1_555 ? 15 AC3 24 SER A 24 ? SER A 23 . ? 1_555 ? 16 AC3 24 ARG A 26 ? ARG A 25 . ? 1_555 ? 17 AC3 24 THR A 49 ? THR A 48 . ? 2_655 ? 18 AC3 24 PRO A 50 ? PRO A 49 . ? 2_655 ? 19 AC3 24 SER A 51 ? SER A 50 . ? 2_655 ? 20 AC3 24 ALA A 52 ? ALA A 51 . ? 2_655 ? 21 AC3 24 ASN A 54 ? ASN A 53 . ? 2_655 ? 22 AC3 24 LYS A 77 ? LYS A 76 . ? 1_555 ? 23 AC3 24 TRP A 78 ? TRP A 77 . ? 1_555 ? 24 AC3 24 ALA A 79 ? ALA A 78 . ? 1_555 ? 25 AC3 24 CYS A 112 ? CYS A 111 . ? 2_655 ? 26 AC3 24 ILE A 116 ? ILE A 115 . ? 2_655 ? 27 AC3 24 CYS A 133 ? CYS A 132 . ? 1_555 ? 28 AC3 24 ILE A 134 ? ILE A 133 . ? 1_555 ? 29 AC3 24 VAL A 135 ? VAL A 134 . ? 1_555 ? 30 AC3 24 ALA A 136 ? ALA A 135 . ? 1_555 ? 31 AC3 24 ALA A 137 ? ALA A 136 . ? 1_555 ? 32 AC3 24 TYR A 181 ? TYR A 180 . ? 1_555 ? 33 AC3 24 LYS A 193 ? LYS A 192 . ? 1_555 ? 34 AC3 24 PO4 C . ? PO4 A 211 . ? 1_555 ? 35 AC3 24 HOH F . ? HOH A 214 . ? 1_555 ? 36 AC3 24 HOH F . ? HOH A 215 . ? 1_555 ? 37 AC3 24 HOH F . ? HOH A 218 . ? 1_555 ? 38 AC4 6 ARG A 27 ? ARG A 26 . ? 1_555 ? 39 AC4 6 LEU A 82 ? LEU A 81 . ? 1_555 ? 40 AC4 6 TRP A 85 ? TRP A 84 . ? 1_555 ? 41 AC4 6 GLU A 166 ? GLU A 165 . ? 1_555 ? 42 AC4 6 ARG A 183 ? ARG A 182 . ? 1_555 ? 43 AC4 6 HIS A 189 ? HIS A 188 . ? 1_555 ? # _atom_sites.entry_id 2R01 _atom_sites.fract_transf_matrix[1][1] 0.01666 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01545 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02083 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 GLU 3 2 ? ? ? A . n A 1 4 GLY 4 3 ? ? ? A . n A 1 5 SER 5 4 ? ? ? A . n A 1 6 LEU 6 5 ? ? ? A . n A 1 7 SER 7 6 ? ? ? A . n A 1 8 ARG 8 7 ? ? ? A . n A 1 9 GLY 9 8 ? ? ? A . n A 1 10 VAL 10 9 ? ? ? A . n A 1 11 GLU 11 10 ? ? ? A . n A 1 12 ILE 12 11 ? ? ? A . n A 1 13 MSE 13 12 ? ? ? A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 ARG 23 22 22 ARG ARG A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 ARG 26 25 25 ARG ARG A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 PHE 28 27 27 PHE PHE A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 GLU 30 29 29 GLU GLU A . n A 1 31 HIS 31 30 30 HIS HIS A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 ALA 33 32 32 ALA ALA A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 ASN 35 34 34 ASN ASN A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 THR 38 37 37 THR THR A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 ARG 40 39 39 ARG ARG A . n A 1 41 ASP 41 40 40 ASP ASP A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 CYS 47 46 46 CYS CYS A . n A 1 48 TYR 48 47 47 TYR TYR A . n A 1 49 THR 49 48 48 THR THR A . n A 1 50 PRO 50 49 49 PRO PRO A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 ASN 54 53 53 ASN ASN A . n A 1 55 ARG 55 54 54 ARG ARG A . n A 1 56 GLN 56 55 55 GLN GLN A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 ARG 59 58 58 ARG ARG A . n A 1 60 PHE 60 59 59 PHE PHE A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 PRO 62 61 61 PRO PRO A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 ASP 67 66 66 ASP ASP A . n A 1 68 MSE 68 67 67 MSE MSE A . n A 1 69 SER 69 68 68 SER SER A . n A 1 70 ASP 70 69 69 ASP ASP A . n A 1 71 LYS 71 70 70 LYS LYS A . n A 1 72 VAL 72 71 71 VAL VAL A . n A 1 73 PHE 73 72 72 PHE PHE A . n A 1 74 PRO 74 73 73 PRO PRO A . n A 1 75 CYS 75 74 74 CYS CYS A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 TRP 78 77 77 TRP TRP A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 TYR 81 80 80 TYR TYR A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 GLU 83 82 82 GLU GLU A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 TRP 85 84 84 TRP TRP A . n A 1 86 PRO 86 85 85 PRO PRO A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 PRO 88 87 87 PRO PRO A . n A 1 89 GLU 89 88 88 GLU GLU A . n A 1 90 PRO 90 89 89 PRO PRO A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 ARG 93 92 92 ARG ARG A . n A 1 94 PRO 94 93 93 PRO PRO A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 ALA 97 96 96 ALA ALA A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 VAL 99 98 98 VAL VAL A . n A 1 100 MSE 100 99 99 MSE MSE A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 CYS 102 101 101 CYS CYS A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 CYS 112 111 111 CYS CYS A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 SER 114 113 113 SER SER A . n A 1 115 GLY 115 114 114 GLY GLY A . n A 1 116 ILE 116 115 115 ILE ILE A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 ALA 118 117 117 ALA ALA A . n A 1 119 GLN 119 118 118 GLN GLN A . n A 1 120 THR 120 119 119 THR THR A . n A 1 121 ILE 121 120 120 ILE ILE A . n A 1 122 MSE 122 121 121 MSE MSE A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 ALA 126 125 125 ALA ALA A . n A 1 127 GLU 127 126 126 GLU GLU A . n A 1 128 LYS 128 127 127 LYS LYS A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 GLY 131 130 130 GLY GLY A . n A 1 132 GLY 132 131 131 GLY GLY A . n A 1 133 CYS 133 132 132 CYS CYS A . n A 1 134 ILE 134 133 133 ILE ILE A . n A 1 135 VAL 135 134 134 VAL VAL A . n A 1 136 ALA 136 135 135 ALA ALA A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 ILE 138 137 137 ILE ILE A . n A 1 139 ASP 139 138 138 ASP ASP A . n A 1 140 ARG 140 139 139 ARG ARG A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 MSE 144 143 143 MSE MSE A . n A 1 145 ALA 145 144 144 ALA ALA A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 GLY 148 147 147 GLY GLY A . n A 1 149 ILE 149 148 148 ILE ILE A . n A 1 150 PRO 150 149 149 PRO PRO A . n A 1 151 ASP 151 150 150 ASP ASP A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 TRP 153 152 152 TRP TRP A . n A 1 154 THR 154 153 153 THR THR A . n A 1 155 VAL 155 154 154 VAL VAL A . n A 1 156 LEU 156 155 155 LEU LEU A . n A 1 157 LEU 157 156 156 LEU LEU A . n A 1 158 VAL 158 157 157 VAL VAL A . n A 1 159 ILE 159 158 158 ILE ILE A . n A 1 160 ALA 160 159 159 ALA ALA A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 GLY 162 161 161 GLY GLY A . n A 1 163 LYS 163 162 162 LYS LYS A . n A 1 164 PRO 164 163 163 PRO PRO A . n A 1 165 ALA 165 164 164 ALA ALA A . n A 1 166 GLU 166 165 165 GLU GLU A . n A 1 167 THR 167 166 166 THR THR A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 VAL 169 168 168 VAL VAL A . n A 1 170 ILE 170 169 169 ILE ILE A . n A 1 171 ASP 171 170 170 ASP ASP A . n A 1 172 GLN 172 171 171 GLN GLN A . n A 1 173 ILE 173 172 172 ILE ILE A . n A 1 174 LYS 174 173 173 LYS LYS A . n A 1 175 PRO 175 174 174 PRO PRO A . n A 1 176 GLY 176 175 175 GLY GLY A . n A 1 177 ASP 177 176 176 ASP ASP A . n A 1 178 ASP 178 177 177 ASP ASP A . n A 1 179 ILE 179 178 178 ILE ILE A . n A 1 180 ARG 180 179 179 ARG ARG A . n A 1 181 TYR 181 180 180 TYR TYR A . n A 1 182 TRP 182 181 181 TRP TRP A . n A 1 183 ARG 183 182 182 ARG ARG A . n A 1 184 ASP 184 183 183 ASP ASP A . n A 1 185 LYS 185 184 184 LYS LYS A . n A 1 186 HIS 186 185 185 HIS HIS A . n A 1 187 GLY 187 186 186 GLY GLY A . n A 1 188 ILE 188 187 187 ILE ILE A . n A 1 189 HIS 189 188 188 HIS HIS A . n A 1 190 HIS 190 189 189 HIS HIS A . n A 1 191 VAL 191 190 190 VAL VAL A . n A 1 192 PRO 192 191 191 PRO PRO A . n A 1 193 LYS 193 192 192 LYS LYS A . n A 1 194 ARG 194 193 193 ARG ARG A . n A 1 195 GLN 195 194 194 GLN GLN A . n A 1 196 VAL 196 195 195 VAL VAL A . n A 1 197 ASP 197 196 196 ASP ASP A . n A 1 198 GLU 198 197 197 GLU GLU A . n A 1 199 LEU 199 198 198 LEU LEU A . n A 1 200 LEU 200 199 199 LEU LEU A . n A 1 201 VAL 201 200 200 VAL VAL A . n A 1 202 THR 202 201 201 THR THR A . n A 1 203 ALA 203 202 202 ALA ALA A . n A 1 204 GLU 204 203 203 GLU GLU A . n A 1 205 GLN 205 204 204 GLN GLN A . n A 1 206 LEU 206 205 205 LEU LEU A . n A 1 207 ARG 207 206 206 ARG ARG A . n A 1 208 GLU 208 207 207 GLU GLU A . n A 1 209 ARG 209 208 ? ? ? A . n A 1 210 GLY 210 209 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 210 1 CA CA A . C 3 PO4 1 211 4 PO4 PO4 A . D 4 FMN 1 212 2 FMN FMN A . E 5 EDO 1 213 3 EDO EDO A . F 6 HOH 1 214 5 HOH HOH A . F 6 HOH 2 215 6 HOH HOH A . F 6 HOH 3 216 7 HOH HOH A . F 6 HOH 4 217 8 HOH HOH A . F 6 HOH 5 218 9 HOH HOH A . F 6 HOH 6 219 10 HOH HOH A . F 6 HOH 7 220 11 HOH HOH A . F 6 HOH 8 221 12 HOH HOH A . F 6 HOH 9 222 13 HOH HOH A . F 6 HOH 10 223 14 HOH HOH A . F 6 HOH 11 224 15 HOH HOH A . F 6 HOH 12 225 16 HOH HOH A . F 6 HOH 13 226 17 HOH HOH A . F 6 HOH 14 227 18 HOH HOH A . F 6 HOH 15 228 19 HOH HOH A . F 6 HOH 16 229 20 HOH HOH A . F 6 HOH 17 230 21 HOH HOH A . F 6 HOH 18 231 22 HOH HOH A . F 6 HOH 19 232 23 HOH HOH A . F 6 HOH 20 233 24 HOH HOH A . F 6 HOH 21 234 25 HOH HOH A . F 6 HOH 22 235 26 HOH HOH A . F 6 HOH 23 236 27 HOH HOH A . F 6 HOH 24 237 28 HOH HOH A . F 6 HOH 25 238 29 HOH HOH A . F 6 HOH 26 239 30 HOH HOH A . F 6 HOH 27 240 31 HOH HOH A . F 6 HOH 28 241 32 HOH HOH A . F 6 HOH 29 242 33 HOH HOH A . F 6 HOH 30 243 34 HOH HOH A . F 6 HOH 31 244 35 HOH HOH A . F 6 HOH 32 245 36 HOH HOH A . F 6 HOH 33 246 37 HOH HOH A . F 6 HOH 34 247 38 HOH HOH A . F 6 HOH 35 248 39 HOH HOH A . F 6 HOH 36 249 40 HOH HOH A . F 6 HOH 37 250 41 HOH HOH A . F 6 HOH 38 251 42 HOH HOH A . F 6 HOH 39 252 43 HOH HOH A . F 6 HOH 40 253 44 HOH HOH A . F 6 HOH 41 254 45 HOH HOH A . F 6 HOH 42 255 46 HOH HOH A . F 6 HOH 43 256 47 HOH HOH A . F 6 HOH 44 257 48 HOH HOH A . F 6 HOH 45 258 49 HOH HOH A . F 6 HOH 46 259 50 HOH HOH A . F 6 HOH 47 260 51 HOH HOH A . F 6 HOH 48 261 52 HOH HOH A . F 6 HOH 49 262 53 HOH HOH A . F 6 HOH 50 263 54 HOH HOH A . F 6 HOH 51 264 55 HOH HOH A . F 6 HOH 52 265 56 HOH HOH A . F 6 HOH 53 266 57 HOH HOH A . F 6 HOH 54 267 58 HOH HOH A . F 6 HOH 55 268 59 HOH HOH A . F 6 HOH 56 269 60 HOH HOH A . F 6 HOH 57 270 61 HOH HOH A . F 6 HOH 58 271 62 HOH HOH A . F 6 HOH 59 272 63 HOH HOH A . F 6 HOH 60 273 64 HOH HOH A . F 6 HOH 61 274 65 HOH HOH A . F 6 HOH 62 275 66 HOH HOH A . F 6 HOH 63 276 67 HOH HOH A . F 6 HOH 64 277 68 HOH HOH A . F 6 HOH 65 278 69 HOH HOH A . F 6 HOH 66 279 70 HOH HOH A . F 6 HOH 67 280 71 HOH HOH A . F 6 HOH 68 281 72 HOH HOH A . F 6 HOH 69 282 73 HOH HOH A . F 6 HOH 70 283 74 HOH HOH A . F 6 HOH 71 284 75 HOH HOH A . F 6 HOH 72 285 76 HOH HOH A . F 6 HOH 73 286 77 HOH HOH A . F 6 HOH 74 287 78 HOH HOH A . F 6 HOH 75 288 79 HOH HOH A . F 6 HOH 76 289 80 HOH HOH A . F 6 HOH 77 290 81 HOH HOH A . F 6 HOH 78 291 82 HOH HOH A . F 6 HOH 79 292 83 HOH HOH A . F 6 HOH 80 293 84 HOH HOH A . F 6 HOH 81 294 85 HOH HOH A . F 6 HOH 82 295 86 HOH HOH A . F 6 HOH 83 296 87 HOH HOH A . F 6 HOH 84 297 88 HOH HOH A . F 6 HOH 85 298 89 HOH HOH A . F 6 HOH 86 299 90 HOH HOH A . F 6 HOH 87 300 91 HOH HOH A . F 6 HOH 88 301 92 HOH HOH A . F 6 HOH 89 302 93 HOH HOH A . F 6 HOH 90 303 94 HOH HOH A . F 6 HOH 91 304 95 HOH HOH A . F 6 HOH 92 305 96 HOH HOH A . F 6 HOH 93 306 97 HOH HOH A . F 6 HOH 94 307 98 HOH HOH A . F 6 HOH 95 308 99 HOH HOH A . F 6 HOH 96 309 100 HOH HOH A . F 6 HOH 97 310 101 HOH HOH A . F 6 HOH 98 311 102 HOH HOH A . F 6 HOH 99 312 103 HOH HOH A . F 6 HOH 100 313 104 HOH HOH A . F 6 HOH 101 314 105 HOH HOH A . F 6 HOH 102 315 106 HOH HOH A . F 6 HOH 103 316 107 HOH HOH A . F 6 HOH 104 317 108 HOH HOH A . F 6 HOH 105 318 109 HOH HOH A . F 6 HOH 106 319 110 HOH HOH A . F 6 HOH 107 320 111 HOH HOH A . F 6 HOH 108 321 112 HOH HOH A . F 6 HOH 109 322 113 HOH HOH A . F 6 HOH 110 323 114 HOH HOH A . F 6 HOH 111 324 115 HOH HOH A . F 6 HOH 112 325 116 HOH HOH A . F 6 HOH 113 326 117 HOH HOH A . F 6 HOH 114 327 118 HOH HOH A . F 6 HOH 115 328 119 HOH HOH A . F 6 HOH 116 329 120 HOH HOH A . F 6 HOH 117 330 121 HOH HOH A . F 6 HOH 118 331 122 HOH HOH A . F 6 HOH 119 332 123 HOH HOH A . F 6 HOH 120 333 124 HOH HOH A . F 6 HOH 121 334 125 HOH HOH A . F 6 HOH 122 335 126 HOH HOH A . F 6 HOH 123 336 127 HOH HOH A . F 6 HOH 124 337 128 HOH HOH A . F 6 HOH 125 338 129 HOH HOH A . F 6 HOH 126 339 130 HOH HOH A . F 6 HOH 127 340 131 HOH HOH A . F 6 HOH 128 341 132 HOH HOH A . F 6 HOH 129 342 133 HOH HOH A . F 6 HOH 130 343 134 HOH HOH A . F 6 HOH 131 344 135 HOH HOH A . F 6 HOH 132 345 136 HOH HOH A . F 6 HOH 133 346 137 HOH HOH A . F 6 HOH 134 347 138 HOH HOH A . F 6 HOH 135 348 139 HOH HOH A . F 6 HOH 136 349 140 HOH HOH A . F 6 HOH 137 350 141 HOH HOH A . F 6 HOH 138 351 142 HOH HOH A . F 6 HOH 139 352 143 HOH HOH A . F 6 HOH 140 353 144 HOH HOH A . F 6 HOH 141 354 145 HOH HOH A . F 6 HOH 142 355 146 HOH HOH A . F 6 HOH 143 356 147 HOH HOH A . F 6 HOH 144 357 148 HOH HOH A . F 6 HOH 145 358 149 HOH HOH A . F 6 HOH 146 359 150 HOH HOH A . F 6 HOH 147 360 151 HOH HOH A . F 6 HOH 148 361 152 HOH HOH A . F 6 HOH 149 362 153 HOH HOH A . F 6 HOH 150 363 154 HOH HOH A . F 6 HOH 151 364 155 HOH HOH A . F 6 HOH 152 365 156 HOH HOH A . F 6 HOH 153 366 157 HOH HOH A . F 6 HOH 154 367 158 HOH HOH A . F 6 HOH 155 368 159 HOH HOH A . F 6 HOH 156 369 160 HOH HOH A . F 6 HOH 157 370 161 HOH HOH A . F 6 HOH 158 371 162 HOH HOH A . F 6 HOH 159 372 163 HOH HOH A . F 6 HOH 160 373 164 HOH HOH A . F 6 HOH 161 374 165 HOH HOH A . F 6 HOH 162 375 166 HOH HOH A . F 6 HOH 163 376 167 HOH HOH A . F 6 HOH 164 377 168 HOH HOH A . F 6 HOH 165 378 169 HOH HOH A . F 6 HOH 166 379 170 HOH HOH A . F 6 HOH 167 380 171 HOH HOH A . F 6 HOH 168 381 172 HOH HOH A . F 6 HOH 169 382 173 HOH HOH A . F 6 HOH 170 383 174 HOH HOH A . F 6 HOH 171 384 175 HOH HOH A . F 6 HOH 172 385 176 HOH HOH A . F 6 HOH 173 386 177 HOH HOH A . F 6 HOH 174 387 178 HOH HOH A . F 6 HOH 175 388 179 HOH HOH A . F 6 HOH 176 389 180 HOH HOH A . F 6 HOH 177 390 181 HOH HOH A . F 6 HOH 178 391 182 HOH HOH A . F 6 HOH 179 392 183 HOH HOH A . F 6 HOH 180 393 184 HOH HOH A . F 6 HOH 181 394 185 HOH HOH A . F 6 HOH 182 395 186 HOH HOH A . F 6 HOH 183 396 187 HOH HOH A . F 6 HOH 184 397 188 HOH HOH A . F 6 HOH 185 398 189 HOH HOH A . F 6 HOH 186 399 190 HOH HOH A . F 6 HOH 187 400 191 HOH HOH A . F 6 HOH 188 401 192 HOH HOH A . F 6 HOH 189 402 193 HOH HOH A . F 6 HOH 190 403 194 HOH HOH A . F 6 HOH 191 404 195 HOH HOH A . F 6 HOH 192 405 196 HOH HOH A . F 6 HOH 193 406 197 HOH HOH A . F 6 HOH 194 407 198 HOH HOH A . F 6 HOH 195 408 199 HOH HOH A . F 6 HOH 196 409 200 HOH HOH A . F 6 HOH 197 410 201 HOH HOH A . F 6 HOH 198 411 202 HOH HOH A . F 6 HOH 199 412 203 HOH HOH A . F 6 HOH 200 413 204 HOH HOH A . F 6 HOH 201 414 205 HOH HOH A . F 6 HOH 202 415 206 HOH HOH A . F 6 HOH 203 416 207 HOH HOH A . F 6 HOH 204 417 208 HOH HOH A . F 6 HOH 205 418 209 HOH HOH A . F 6 HOH 206 419 210 HOH HOH A . F 6 HOH 207 420 211 HOH HOH A . F 6 HOH 208 421 212 HOH HOH A . F 6 HOH 209 422 213 HOH HOH A . F 6 HOH 210 423 214 HOH HOH A . F 6 HOH 211 424 215 HOH HOH A . F 6 HOH 212 425 216 HOH HOH A . F 6 HOH 213 426 217 HOH HOH A . F 6 HOH 214 427 218 HOH HOH A . F 6 HOH 215 428 219 HOH HOH A . F 6 HOH 216 429 220 HOH HOH A . F 6 HOH 217 430 221 HOH HOH A . F 6 HOH 218 431 222 HOH HOH A . F 6 HOH 219 432 223 HOH HOH A . F 6 HOH 220 433 224 HOH HOH A . F 6 HOH 221 434 225 HOH HOH A . F 6 HOH 222 435 226 HOH HOH A . F 6 HOH 223 436 227 HOH HOH A . F 6 HOH 224 437 228 HOH HOH A . F 6 HOH 225 438 229 HOH HOH A . F 6 HOH 226 439 230 HOH HOH A . F 6 HOH 227 440 231 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 68 A MSE 67 ? MET SELENOMETHIONINE 2 A MSE 100 A MSE 99 ? MET SELENOMETHIONINE 3 A MSE 122 A MSE 121 ? MET SELENOMETHIONINE 4 A MSE 144 A MSE 143 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 8660 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 60.0300000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 389 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A TRP 78 ? A TRP 77 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? A ALA 79 ? A ALA 78 ? 1_555 67.8 ? 2 O ? A TRP 78 ? A TRP 77 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? A LEU 82 ? A LEU 81 ? 1_555 141.0 ? 3 O ? A ALA 79 ? A ALA 78 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? A LEU 82 ? A LEU 81 ? 1_555 81.1 ? 4 O ? A TRP 78 ? A TRP 77 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? A TRP 85 ? A TRP 84 ? 1_555 98.1 ? 5 O ? A ALA 79 ? A ALA 78 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? A TRP 85 ? A TRP 84 ? 1_555 115.7 ? 6 O ? A LEU 82 ? A LEU 81 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? A TRP 85 ? A TRP 84 ? 1_555 74.2 ? 7 O ? A TRP 78 ? A TRP 77 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 238 ? 4_547 116.5 ? 8 O ? A ALA 79 ? A ALA 78 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 238 ? 4_547 83.9 ? 9 O ? A LEU 82 ? A LEU 81 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 238 ? 4_547 81.4 ? 10 O ? A TRP 85 ? A TRP 84 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 238 ? 4_547 145.1 ? 11 O ? A TRP 78 ? A TRP 77 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 264 ? 1_555 76.6 ? 12 O ? A ALA 79 ? A ALA 78 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 264 ? 1_555 127.8 ? 13 O ? A LEU 82 ? A LEU 81 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 264 ? 1_555 142.4 ? 14 O ? A TRP 85 ? A TRP 84 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 264 ? 1_555 105.9 ? 15 O ? F HOH . ? A HOH 238 ? 4_547 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 264 ? 1_555 79.0 ? 16 O ? A TRP 78 ? A TRP 77 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 305 ? 1_555 128.3 ? 17 O ? A ALA 79 ? A ALA 78 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 305 ? 1_555 160.2 ? 18 O ? A LEU 82 ? A LEU 81 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 305 ? 1_555 87.7 ? 19 O ? A TRP 85 ? A TRP 84 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 305 ? 1_555 76.3 ? 20 O ? F HOH . ? A HOH 238 ? 4_547 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 305 ? 1_555 78.2 ? 21 O ? F HOH . ? A HOH 264 ? 1_555 CA ? B CA . ? A CA 210 ? 1_555 O ? F HOH . ? A HOH 305 ? 1_555 57.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-09-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_conn_type 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 18 5 'Structure model' '_pdbx_struct_conn_angle.value' 19 5 'Structure model' '_struct_conn.conn_type_id' 20 5 'Structure model' '_struct_conn.id' 21 5 'Structure model' '_struct_conn.pdbx_dist_value' 22 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 24 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_symmetry' 38 5 'Structure model' '_struct_conn_type.id' 39 5 'Structure model' '_struct_ref_seq_dif.details' 40 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHARP . ? ? ? ? phasing ? ? ? 9 SHELXD . ? ? ? ? phasing ? ? ? 10 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ; BIOMOLECULE: 1 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON BURIED SURFACE AREA. SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 13 ? CD ? A LYS 14 CD 2 1 Y 1 A LYS 13 ? CE ? A LYS 14 CE 3 1 Y 1 A LYS 13 ? NZ ? A LYS 14 NZ 4 1 Y 1 A ARG 15 ? CD ? A ARG 16 CD 5 1 Y 1 A ARG 15 ? NE ? A ARG 16 NE 6 1 Y 1 A ARG 15 ? CZ ? A ARG 16 CZ 7 1 Y 1 A ARG 15 ? NH1 ? A ARG 16 NH1 8 1 Y 1 A ARG 15 ? NH2 ? A ARG 16 NH2 9 1 Y 1 A GLU 16 ? CD ? A GLU 17 CD 10 1 Y 1 A GLU 16 ? OE1 ? A GLU 17 OE1 11 1 Y 1 A GLU 16 ? OE2 ? A GLU 17 OE2 12 1 Y 1 A LYS 70 ? CE ? A LYS 71 CE 13 1 Y 1 A LYS 70 ? NZ ? A LYS 71 NZ 14 1 Y 1 A LYS 76 ? CD ? A LYS 77 CD 15 1 Y 1 A LYS 76 ? CE ? A LYS 77 CE 16 1 Y 1 A LYS 76 ? NZ ? A LYS 77 NZ 17 1 Y 1 A CYS 111 ? SG ? A CYS 112 SG 18 1 Y 1 A GLU 128 ? CD ? A GLU 129 CD 19 1 Y 1 A GLU 128 ? OE1 ? A GLU 129 OE1 20 1 Y 1 A GLU 128 ? OE2 ? A GLU 129 OE2 21 1 Y 1 A LYS 173 ? CG ? A LYS 174 CG 22 1 Y 1 A LYS 173 ? CD ? A LYS 174 CD 23 1 Y 1 A LYS 173 ? CE ? A LYS 174 CE 24 1 Y 1 A LYS 173 ? NZ ? A LYS 174 NZ 25 1 Y 1 A LYS 184 ? CE ? A LYS 185 CE 26 1 Y 1 A LYS 184 ? NZ ? A LYS 185 NZ 27 1 Y 1 A GLU 203 ? CD ? A GLU 204 CD 28 1 Y 1 A GLU 203 ? OE1 ? A GLU 204 OE1 29 1 Y 1 A GLU 203 ? OE2 ? A GLU 204 OE2 30 1 Y 1 A GLU 207 ? CD ? A GLU 208 CD 31 1 Y 1 A GLU 207 ? OE1 ? A GLU 208 OE1 32 1 Y 1 A GLU 207 ? OE2 ? A GLU 208 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A GLU 2 ? A GLU 3 4 1 Y 1 A GLY 3 ? A GLY 4 5 1 Y 1 A SER 4 ? A SER 5 6 1 Y 1 A LEU 5 ? A LEU 6 7 1 Y 1 A SER 6 ? A SER 7 8 1 Y 1 A ARG 7 ? A ARG 8 9 1 Y 1 A GLY 8 ? A GLY 9 10 1 Y 1 A VAL 9 ? A VAL 10 11 1 Y 1 A GLU 10 ? A GLU 11 12 1 Y 1 A ILE 11 ? A ILE 12 13 1 Y 1 A MSE 12 ? A MSE 13 14 1 Y 1 A ARG 208 ? A ARG 209 15 1 Y 1 A GLY 209 ? A GLY 210 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'PHOSPHATE ION' PO4 4 'FLAVIN MONONUCLEOTIDE' FMN 5 1,2-ETHANEDIOL EDO 6 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #