data_2R48 # _entry.id 2R48 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2R48 RCSB RCSB044404 WWPDB D_1000044404 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC1979.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2R48 _pdbx_database_status.recvd_initial_deposition_date 2007-08-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nocek, B.' 1 'Cuff, M.' 2 'Sather, A.' 3 'Clancy, S.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Crystal structure of the fructose specific IIB subunit of PTS system from Bacillus subtilis subsp. subtilis str. 168.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nocek, B.' 1 primary 'Cuff, M.' 2 primary 'Sather, A.' 3 primary 'Clancy, S.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 2R48 _cell.length_a 48.931 _cell.length_b 48.931 _cell.length_c 68.250 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2R48 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component' 11476.965 1 ? ? 'Residues 2-104' ? 2 water nat water 18.015 57 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAKLLAITSCPNGIAHTY(MSE)AAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFIG KKLLSVGVQDGIRKPEELIQKALNGDIPVY ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAKLLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFIGKKLL SVGVQDGIRKPEELIQKALNGDIPVY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC1979.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 LYS n 1 5 LEU n 1 6 LEU n 1 7 ALA n 1 8 ILE n 1 9 THR n 1 10 SER n 1 11 CYS n 1 12 PRO n 1 13 ASN n 1 14 GLY n 1 15 ILE n 1 16 ALA n 1 17 HIS n 1 18 THR n 1 19 TYR n 1 20 MSE n 1 21 ALA n 1 22 ALA n 1 23 GLU n 1 24 ASN n 1 25 LEU n 1 26 GLN n 1 27 LYS n 1 28 ALA n 1 29 ALA n 1 30 ASP n 1 31 ARG n 1 32 LEU n 1 33 GLY n 1 34 VAL n 1 35 SER n 1 36 ILE n 1 37 LYS n 1 38 VAL n 1 39 GLU n 1 40 THR n 1 41 GLN n 1 42 GLY n 1 43 GLY n 1 44 ILE n 1 45 GLY n 1 46 VAL n 1 47 GLU n 1 48 ASN n 1 49 LYS n 1 50 LEU n 1 51 THR n 1 52 GLU n 1 53 GLU n 1 54 GLU n 1 55 ILE n 1 56 ARG n 1 57 GLU n 1 58 ALA n 1 59 ASP n 1 60 ALA n 1 61 ILE n 1 62 ILE n 1 63 ILE n 1 64 ALA n 1 65 ALA n 1 66 ASP n 1 67 ARG n 1 68 SER n 1 69 VAL n 1 70 ASN n 1 71 LYS n 1 72 ASP n 1 73 ARG n 1 74 PHE n 1 75 ILE n 1 76 GLY n 1 77 LYS n 1 78 LYS n 1 79 LEU n 1 80 LEU n 1 81 SER n 1 82 VAL n 1 83 GLY n 1 84 VAL n 1 85 GLN n 1 86 ASP n 1 87 GLY n 1 88 ILE n 1 89 ARG n 1 90 LYS n 1 91 PRO n 1 92 GLU n 1 93 GLU n 1 94 LEU n 1 95 ILE n 1 96 GLN n 1 97 LYS n 1 98 ALA n 1 99 LEU n 1 100 ASN n 1 101 GLY n 1 102 ASP n 1 103 ILE n 1 104 PRO n 1 105 VAL n 1 106 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene 'manP, BSU12010' _entity_src_gen.gene_src_species 'Bacillus subtilis' _entity_src_gen.gene_src_strain 168 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis subsp. subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O31645_BACSU _struct_ref.pdbx_db_accession O31645 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KLLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFIGKKLLSVG VQDGIRKPEELIQKALNGDIPVY ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2R48 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O31645 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 104 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2R48 SER A 1 ? UNP O31645 ? ? 'EXPRESSION TAG' -1 1 1 2R48 ASN A 2 ? UNP O31645 ? ? 'EXPRESSION TAG' 0 2 1 2R48 ALA A 3 ? UNP O31645 ? ? 'EXPRESSION TAG' 1 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2R48 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.78 _exptl_crystal.density_percent_sol 30.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.2 M Sodium citrate tribasic dihydrate, 20% PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-08-03 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97950 1.0 2 0.97960 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97950, 0.97960' # _reflns.entry_id 2R48 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 40.0 _reflns.number_all 7790 _reflns.number_obs 7790 _reflns.percent_possible_obs 95.0 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 61.7 _reflns_shell.Rmerge_I_obs 0.378 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2R48 _refine.ls_number_reflns_obs 7402 _refine.ls_number_reflns_all 7785 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.78 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 95.19 _refine.ls_R_factor_obs 0.18601 _refine.ls_R_factor_all 0.18710 _refine.ls_R_factor_R_work 0.18328 _refine.ls_R_factor_R_free 0.23743 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 361 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 17.628 _refine.aniso_B[1][1] 1.57 _refine.aniso_B[2][2] 1.57 _refine.aniso_B[3][3] -3.13 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.158 _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.117 _refine.overall_SU_B 7.620 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 795 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 852 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 39.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 805 'X-RAY DIFFRACTION' ? r_bond_other_d 0.011 0.020 ? 550 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.712 1.989 ? 1086 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.033 3.000 ? 1360 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.461 5.000 ? 106 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.292 25.882 ? 34 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.805 15.000 ? 155 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.832 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.092 0.200 ? 129 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 896 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 137 'X-RAY DIFFRACTION' ? r_nbd_refined 0.203 0.200 ? 159 'X-RAY DIFFRACTION' ? r_nbd_other 0.207 0.200 ? 556 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.171 0.200 ? 392 'X-RAY DIFFRACTION' ? r_nbtor_other 0.089 0.200 ? 443 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.201 0.200 ? 42 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.229 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.248 0.200 ? 35 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.135 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.171 1.500 ? 629 'X-RAY DIFFRACTION' ? r_mcbond_other 0.267 1.500 ? 216 'X-RAY DIFFRACTION' ? r_mcangle_it 1.417 2.000 ? 838 'X-RAY DIFFRACTION' ? r_scbond_it 2.453 3.000 ? 300 'X-RAY DIFFRACTION' ? r_scangle_it 3.519 4.500 ? 247 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 359 _refine_ls_shell.R_factor_R_work 0.256 _refine_ls_shell.percent_reflns_obs 65.03 _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 13 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2R48 _struct.title 'Crystal structure of the fructose specific IIB subunit of PTS system from Bacillus subtilis subsp. subtilis str. 168' _struct.pdbx_descriptor 'Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2R48 _struct_keywords.pdbx_keywords 'TRANSFERASE, TRANSPORT PROTEIN' _struct_keywords.text ;PTS system, phosphotransferase system, fructose specific IIB subunit, pfam02379, PSI-2, MCSG, Structural Genomics, Protein Structure Initiative, Midwest Center for Structural Genomics, Membrane, Sugar transport, Transmembrane, Transport, TRANSFERASE, TRANSPORT PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'According to authors, the crystal packing indicates that dimer could be the biologically relevant oligomerization state.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 15 ? GLY A 33 ? ILE A 13 GLY A 31 1 ? 19 HELX_P HELX_P2 2 THR A 51 ? ALA A 58 ? THR A 49 ALA A 56 1 ? 8 HELX_P HELX_P3 3 LYS A 71 ? ILE A 75 ? LYS A 69 ILE A 73 5 ? 5 HELX_P HELX_P4 4 GLY A 83 ? LYS A 90 ? GLY A 81 LYS A 88 1 ? 8 HELX_P HELX_P5 5 LYS A 90 ? GLY A 101 ? LYS A 88 GLY A 99 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A TYR 19 C ? ? ? 1_555 A MSE 20 N ? ? A TYR 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 20 C ? ? ? 1_555 A ALA 21 N ? ? A MSE 18 A ALA 19 1_555 ? ? ? ? ? ? ? 1.338 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 45 ? GLU A 47 ? GLY A 43 GLU A 45 A 2 SER A 35 ? GLY A 42 ? SER A 33 GLY A 40 A 3 LYS A 4 ? SER A 10 ? LYS A 2 SER A 8 A 4 ALA A 60 ? ALA A 65 ? ALA A 58 ALA A 63 A 5 LEU A 79 ? VAL A 82 ? LEU A 77 VAL A 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 47 ? O GLU A 45 N THR A 40 ? N THR A 38 A 2 3 O GLU A 39 ? O GLU A 37 N ALA A 7 ? N ALA A 5 A 3 4 N ILE A 8 ? N ILE A 6 O ALA A 64 ? O ALA A 62 A 4 5 N ILE A 63 ? N ILE A 61 O VAL A 82 ? O VAL A 80 # _database_PDB_matrix.entry_id 2R48 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2R48 _atom_sites.fract_transf_matrix[1][1] 0.020437 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020437 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014652 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 ? ? ? A . n A 1 2 ASN 2 0 0 ASN ASN A . n A 1 3 ALA 3 1 1 ALA ALA A . n A 1 4 LYS 4 2 2 LYS LYS A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 LEU 6 4 4 LEU LEU A . n A 1 7 ALA 7 5 5 ALA ALA A . n A 1 8 ILE 8 6 6 ILE ILE A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 SER 10 8 8 SER SER A . n A 1 11 CYS 11 9 9 CYS CYS A . n A 1 12 PRO 12 10 10 PRO PRO A . n A 1 13 ASN 13 11 11 ASN ASN A . n A 1 14 GLY 14 12 12 GLY GLY A . n A 1 15 ILE 15 13 13 ILE ILE A . n A 1 16 ALA 16 14 14 ALA ALA A . n A 1 17 HIS 17 15 15 HIS HIS A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 TYR 19 17 17 TYR TYR A . n A 1 20 MSE 20 18 18 MSE MSE A . n A 1 21 ALA 21 19 19 ALA ALA A . n A 1 22 ALA 22 20 20 ALA ALA A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 ASN 24 22 22 ASN ASN A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 GLN 26 24 24 GLN GLN A . n A 1 27 LYS 27 25 25 LYS LYS A . n A 1 28 ALA 28 26 26 ALA ALA A . n A 1 29 ALA 29 27 27 ALA ALA A . n A 1 30 ASP 30 28 28 ASP ASP A . n A 1 31 ARG 31 29 29 ARG ARG A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 GLY 33 31 31 GLY GLY A . n A 1 34 VAL 34 32 32 VAL VAL A . n A 1 35 SER 35 33 33 SER SER A . n A 1 36 ILE 36 34 34 ILE ILE A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 GLU 39 37 37 GLU GLU A . n A 1 40 THR 40 38 38 THR THR A . n A 1 41 GLN 41 39 39 GLN GLN A . n A 1 42 GLY 42 40 40 GLY GLY A . n A 1 43 GLY 43 41 41 GLY GLY A . n A 1 44 ILE 44 42 42 ILE ILE A . n A 1 45 GLY 45 43 43 GLY GLY A . n A 1 46 VAL 46 44 44 VAL VAL A . n A 1 47 GLU 47 45 45 GLU GLU A . n A 1 48 ASN 48 46 46 ASN ASN A . n A 1 49 LYS 49 47 47 LYS LYS A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 THR 51 49 49 THR THR A . n A 1 52 GLU 52 50 50 GLU GLU A . n A 1 53 GLU 53 51 51 GLU GLU A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 ILE 55 53 53 ILE ILE A . n A 1 56 ARG 56 54 54 ARG ARG A . n A 1 57 GLU 57 55 55 GLU GLU A . n A 1 58 ALA 58 56 56 ALA ALA A . n A 1 59 ASP 59 57 57 ASP ASP A . n A 1 60 ALA 60 58 58 ALA ALA A . n A 1 61 ILE 61 59 59 ILE ILE A . n A 1 62 ILE 62 60 60 ILE ILE A . n A 1 63 ILE 63 61 61 ILE ILE A . n A 1 64 ALA 64 62 62 ALA ALA A . n A 1 65 ALA 65 63 63 ALA ALA A . n A 1 66 ASP 66 64 64 ASP ASP A . n A 1 67 ARG 67 65 65 ARG ARG A . n A 1 68 SER 68 66 66 SER SER A . n A 1 69 VAL 69 67 67 VAL VAL A . n A 1 70 ASN 70 68 68 ASN ASN A . n A 1 71 LYS 71 69 69 LYS LYS A . n A 1 72 ASP 72 70 70 ASP ASP A . n A 1 73 ARG 73 71 71 ARG ARG A . n A 1 74 PHE 74 72 72 PHE PHE A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 GLY 76 74 74 GLY GLY A . n A 1 77 LYS 77 75 75 LYS LYS A . n A 1 78 LYS 78 76 76 LYS LYS A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 SER 81 79 79 SER SER A . n A 1 82 VAL 82 80 80 VAL VAL A . n A 1 83 GLY 83 81 81 GLY GLY A . n A 1 84 VAL 84 82 82 VAL VAL A . n A 1 85 GLN 85 83 83 GLN GLN A . n A 1 86 ASP 86 84 84 ASP ASP A . n A 1 87 GLY 87 85 85 GLY GLY A . n A 1 88 ILE 88 86 86 ILE ILE A . n A 1 89 ARG 89 87 87 ARG ARG A . n A 1 90 LYS 90 88 88 LYS LYS A . n A 1 91 PRO 91 89 89 PRO PRO A . n A 1 92 GLU 92 90 90 GLU GLU A . n A 1 93 GLU 93 91 91 GLU GLU A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 ILE 95 93 93 ILE ILE A . n A 1 96 GLN 96 94 94 GLN GLN A . n A 1 97 LYS 97 95 95 LYS LYS A . n A 1 98 ALA 98 96 96 ALA ALA A . n A 1 99 LEU 99 97 97 LEU LEU A . n A 1 100 ASN 100 98 98 ASN ASN A . n A 1 101 GLY 101 99 99 GLY GLY A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 ILE 103 101 101 ILE ILE A . n A 1 104 PRO 104 102 102 PRO PRO A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 TYR 106 104 104 TYR TYR A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 20 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 18 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 126 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-09-11 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 13.9321 7.1277 20.1301 0.1251 0.1426 0.1441 -0.0642 -0.0525 0.0065 5.6179 7.9656 16.4570 -3.4615 4.6220 -7.7610 0.0940 -0.1794 -0.2212 0.2578 -0.1483 -0.4807 0.0345 0.4865 0.0543 'X-RAY DIFFRACTION' 2 ? refined 5.1731 16.4606 3.1306 0.2730 0.1979 0.0971 0.0634 -0.0413 0.0733 5.0906 0.5335 20.2913 -0.8160 -9.5412 2.5142 0.4876 0.4491 -0.1222 -0.6574 -0.2086 0.2103 -1.4826 -0.7701 -0.2790 'X-RAY DIFFRACTION' 3 ? refined 12.4663 11.5128 5.0293 0.1309 0.2012 0.0645 -0.0495 0.0027 -0.0244 3.6193 1.6498 4.7648 -2.3206 -1.3600 0.0423 -0.0280 0.2722 -0.1386 0.0658 0.0530 0.0328 -0.2252 0.3266 -0.0250 'X-RAY DIFFRACTION' 4 ? refined 19.2290 6.8132 12.0649 0.1145 0.1989 0.0749 -0.0289 -0.0268 -0.0395 4.3642 10.7034 9.7303 -2.6329 -0.6913 -6.5657 0.1189 0.4724 0.1149 -0.5788 -0.2735 -0.1648 0.9969 -0.1877 0.1546 'X-RAY DIFFRACTION' 5 ? refined 16.5147 5.9149 16.1082 0.1191 0.1296 0.1058 -0.0044 -0.0299 -0.0822 20.1694 1.5174 2.5294 -0.6031 1.4149 -1.9511 0.2866 0.2759 -0.4066 -0.0574 -0.1032 -0.0315 0.0579 0.2533 -0.1834 'X-RAY DIFFRACTION' 6 ? refined 0.9645 10.2465 7.3578 0.1227 0.2006 0.0950 -0.0466 -0.0319 0.0622 12.9077 16.8084 6.7492 -2.1269 8.5681 -5.5920 -0.0059 0.8655 0.1718 -0.8942 0.3388 0.5387 0.3377 0.5316 -0.3329 'X-RAY DIFFRACTION' 7 ? refined 3.2867 4.3065 14.3260 0.0541 0.1136 0.1419 -0.0497 -0.0268 0.0151 1.2511 6.0429 34.3763 -2.2822 3.1636 -2.6459 -0.0066 0.1042 -0.2526 -0.3727 0.3250 0.2075 0.0422 -0.8866 -0.3184 'X-RAY DIFFRACTION' 8 ? refined 3.9783 3.1053 25.1406 0.1083 0.1107 0.1315 -0.0384 0.0404 0.0670 15.3247 15.4545 13.5616 2.3432 14.3456 0.7788 0.1880 -0.9389 -0.4709 0.6321 -0.1915 0.5438 0.0261 -0.5540 0.0035 'X-RAY DIFFRACTION' 9 ? refined 8.4543 14.1038 17.9965 0.1551 0.0958 0.0798 -0.0241 -0.0037 -0.0033 1.2691 2.8351 9.5780 0.9828 0.4655 -4.0567 0.0046 -0.0934 0.1234 0.0317 0.1124 0.0117 -0.1417 -0.0593 -0.1171 'X-RAY DIFFRACTION' 10 ? refined 1.3162 14.4677 22.1823 0.1353 0.1111 0.0953 0.0287 0.0542 0.0071 5.6148 3.3661 17.7920 0.6792 2.4333 -6.4840 0.0157 -0.1594 0.0456 0.4454 0.3323 0.4401 -0.9211 -0.0938 -0.3479 'X-RAY DIFFRACTION' 11 ? refined 10.6717 17.3855 20.1150 0.1457 0.1230 0.0818 -0.0389 -0.0070 -0.0313 1.6040 2.7049 8.4246 0.6606 -0.8564 -3.0023 0.1168 -0.0643 0.1380 0.1504 0.1602 0.0498 -0.2098 0.0277 -0.2770 'X-RAY DIFFRACTION' 12 ? refined 16.9641 19.1970 7.7891 0.1713 0.2219 0.0706 -0.1009 0.0822 -0.0113 13.0902 5.5926 9.1583 0.9207 4.1223 2.1781 0.2052 0.0792 0.2494 -0.7086 0.1443 -0.0892 -1.0264 0.9109 -0.3495 'X-RAY DIFFRACTION' 13 ? refined 20.6096 15.5253 17.9873 0.0232 0.1651 0.1110 -0.0792 -0.0216 -0.0394 4.7936 3.4697 33.1470 -1.3329 4.5168 -2.4981 -0.1619 0.2423 -0.1452 0.2347 0.0903 -0.5422 -0.7477 0.7397 0.0716 'X-RAY DIFFRACTION' 14 ? refined 12.5790 18.6175 27.5104 0.0748 0.0670 0.1409 0.0730 -0.0186 -0.1130 41.6031 7.1482 7.4387 -2.7172 3.8688 -3.6201 -0.6178 -1.0372 1.5352 0.2931 0.1069 -0.8760 -0.0898 -0.3332 0.5110 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 0 A 2 A 7 A 9 ? 'X-RAY DIFFRACTION' ? 2 2 A 8 A 10 A 14 A 16 ? 'X-RAY DIFFRACTION' ? 3 3 A 15 A 17 A 22 A 24 ? 'X-RAY DIFFRACTION' ? 4 4 A 23 A 25 A 28 A 30 ? 'X-RAY DIFFRACTION' ? 5 5 A 29 A 31 A 37 A 39 ? 'X-RAY DIFFRACTION' ? 6 6 A 38 A 40 A 44 A 46 ? 'X-RAY DIFFRACTION' ? 7 7 A 45 A 47 A 49 A 51 ? 'X-RAY DIFFRACTION' ? 8 8 A 50 A 52 A 54 A 56 ? 'X-RAY DIFFRACTION' ? 9 9 A 55 A 57 A 66 A 68 ? 'X-RAY DIFFRACTION' ? 10 10 A 67 A 69 A 74 A 76 ? 'X-RAY DIFFRACTION' ? 11 11 A 75 A 77 A 82 A 84 ? 'X-RAY DIFFRACTION' ? 12 12 A 83 A 85 A 87 A 89 ? 'X-RAY DIFFRACTION' ? 13 13 A 88 A 90 A 97 A 99 ? 'X-RAY DIFFRACTION' ? 14 14 A 98 A 100 A 104 A 106 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SBC-Collect 'data collection' . ? 2 HKL-3000 'data reduction' . ? 3 HKL-3000 'data scaling' . ? 4 HKL-3000 phasing . ? 5 SHELXD phasing . ? 6 SHELXE 'model building' . ? 7 MLPHARE phasing . ? 8 DM phasing . ? 9 SOLVE phasing . ? 10 RESOLVE phasing . ? 11 ARP/wARP 'model building' . ? 12 CCP4 phasing . ? 13 Coot 'model building' . ? 14 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 121 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 158 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id -1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 105 1 HOH HOH A . B 2 HOH 2 106 2 HOH HOH A . B 2 HOH 3 107 3 HOH HOH A . B 2 HOH 4 108 4 HOH HOH A . B 2 HOH 5 109 5 HOH HOH A . B 2 HOH 6 110 6 HOH HOH A . B 2 HOH 7 111 7 HOH HOH A . B 2 HOH 8 112 8 HOH HOH A . B 2 HOH 9 113 9 HOH HOH A . B 2 HOH 10 114 10 HOH HOH A . B 2 HOH 11 115 11 HOH HOH A . B 2 HOH 12 116 12 HOH HOH A . B 2 HOH 13 117 13 HOH HOH A . B 2 HOH 14 118 14 HOH HOH A . B 2 HOH 15 119 16 HOH HOH A . B 2 HOH 16 120 17 HOH HOH A . B 2 HOH 17 121 18 HOH HOH A . B 2 HOH 18 122 19 HOH HOH A . B 2 HOH 19 123 20 HOH HOH A . B 2 HOH 20 124 21 HOH HOH A . B 2 HOH 21 125 22 HOH HOH A . B 2 HOH 22 126 23 HOH HOH A . B 2 HOH 23 127 24 HOH HOH A . B 2 HOH 24 128 25 HOH HOH A . B 2 HOH 25 129 26 HOH HOH A . B 2 HOH 26 130 27 HOH HOH A . B 2 HOH 27 131 28 HOH HOH A . B 2 HOH 28 132 30 HOH HOH A . B 2 HOH 29 133 31 HOH HOH A . B 2 HOH 30 134 32 HOH HOH A . B 2 HOH 31 135 33 HOH HOH A . B 2 HOH 32 136 34 HOH HOH A . B 2 HOH 33 137 35 HOH HOH A . B 2 HOH 34 138 36 HOH HOH A . B 2 HOH 35 139 37 HOH HOH A . B 2 HOH 36 140 38 HOH HOH A . B 2 HOH 37 141 39 HOH HOH A . B 2 HOH 38 142 40 HOH HOH A . B 2 HOH 39 143 41 HOH HOH A . B 2 HOH 40 144 42 HOH HOH A . B 2 HOH 41 145 43 HOH HOH A . B 2 HOH 42 146 44 HOH HOH A . B 2 HOH 43 147 47 HOH HOH A . B 2 HOH 44 148 48 HOH HOH A . B 2 HOH 45 149 49 HOH HOH A . B 2 HOH 46 150 50 HOH HOH A . B 2 HOH 47 151 51 HOH HOH A . B 2 HOH 48 152 52 HOH HOH A . B 2 HOH 49 153 53 HOH HOH A . B 2 HOH 50 154 54 HOH HOH A . B 2 HOH 51 155 55 HOH HOH A . B 2 HOH 52 156 56 HOH HOH A . B 2 HOH 53 157 57 HOH HOH A . B 2 HOH 54 158 58 HOH HOH A . B 2 HOH 55 159 59 HOH HOH A . B 2 HOH 56 160 60 HOH HOH A . B 2 HOH 57 161 61 HOH HOH A . #