HEADER TRANSPORT PROTEIN 31-AUG-07 2R4N TITLE CRYSTAL STRUCTURE OF THE LONG-CHAIN FATTY ACID TRANSPORTER FADL MUTANT TITLE 2 N33A COMPND MOL_ID: 1; COMPND 2 MOLECULE: LONG-CHAIN FATTY ACID TRANSPORT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OUTER MEMBRANE FADL PROTEIN, OUTER MEMBRANE FLP PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FADL, TTR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C43(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD22 KEYWDS BETA BARREL, OUTER MEMBRANE PROTEIN, LIPID TRANSPORT, PHAGE KEYWDS 2 RECOGNITION, TRANSMEMBRANE, TRANSPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.M.HEARN,D.R.PATEL,B.W.LEPORE,M.INDIC,B.VAN DEN BERG REVDAT 9 30-AUG-23 2R4N 1 REMARK REVDAT 8 20-OCT-21 2R4N 1 REMARK SEQADV REVDAT 7 09-JUN-09 2R4N 1 REVDAT REVDAT 6 31-MAR-09 2R4N 1 JRNL REVDAT 5 24-MAR-09 2R4N 1 JRNL REVDAT 4 24-FEB-09 2R4N 1 VERSN REVDAT 3 27-JAN-09 2R4N 1 JRNL REVDAT 2 16-DEC-08 2R4N 1 JRNL REVDAT 1 16-SEP-08 2R4N 0 JRNL AUTH E.M.HEARN,D.R.PATEL,B.W.LEPORE,M.INDIC,B.VAN DEN BERG JRNL TITL TRANSMEMBRANE PASSAGE OF HYDROPHOBIC COMPOUNDS THROUGH A JRNL TITL 2 PROTEIN CHANNEL WALL JRNL REF NATURE V. 458 367 2009 JRNL REFN ISSN 0028-0836 JRNL PMID 19182779 JRNL DOI 10.1038/NATURE07678 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.VAN DEN BERG,P.N.BLACK,W.M.CLEMONS JR.,T.A.RAPOPORT REMARK 1 TITL CRYSTAL STRUCTURE OF THE LONG-CHAIN FATTY ACID TRANSPORTER REMARK 1 TITL 2 FADL REMARK 1 REF SCIENCE V. 304 1506 2004 REMARK 1 REFN ISSN 0036-8075 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 85.2 REMARK 3 NUMBER OF REFLECTIONS : 13667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.332 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1049 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE : 0.3930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 133 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6496 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.01600 REMARK 3 B22 (A**2) : -16.24400 REMARK 3 B33 (A**2) : 10.22800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM SIGMAA (A) : 0.41 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.59 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.72 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2R4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044419. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.10 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL CUT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15295 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.110 REMARK 200 RESOLUTION RANGE LOW (A) : 37.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.1 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.28800 REMARK 200 R SYM FOR SHELL (I) : 0.28800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1T16 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 400, 0.1M CADMIUM CHLORIDE, REMARK 280 0.1M SODIUM ACETATE, PH 4.60, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.99300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 422 REMARK 465 HIS A 423 REMARK 465 HIS A 424 REMARK 465 HIS A 425 REMARK 465 HIS A 426 REMARK 465 HIS A 427 REMARK 465 HIS B 422 REMARK 465 HIS B 423 REMARK 465 HIS B 424 REMARK 465 HIS B 425 REMARK 465 HIS B 426 REMARK 465 HIS B 427 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE B 37 N MET B 39 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 272 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 17 79.21 53.93 REMARK 500 ALA A 24 53.15 -118.18 REMARK 500 THR A 38 80.83 -65.53 REMARK 500 MET A 39 -2.94 179.30 REMARK 500 SER A 46 133.83 -179.55 REMARK 500 ALA A 49 148.47 -174.75 REMARK 500 SER A 64 35.21 -84.73 REMARK 500 ASN A 72 84.77 45.68 REMARK 500 ALA A 105 95.52 -161.39 REMARK 500 LEU A 136 -81.38 -137.94 REMARK 500 ASN A 137 -161.38 -109.76 REMARK 500 ALA A 139 -32.47 -139.56 REMARK 500 GLU A 156 115.56 -160.36 REMARK 500 SER A 173 -165.55 -115.95 REMARK 500 GLN A 177 55.62 -92.32 REMARK 500 ILE A 191 104.08 -40.10 REMARK 500 ASN A 194 45.52 -94.66 REMARK 500 ALA A 198 141.43 179.92 REMARK 500 LYS A 219 -17.86 -37.51 REMARK 500 LYS A 236 83.82 -150.05 REMARK 500 ASN A 244 158.18 -44.36 REMARK 500 ASN A 249 -18.99 84.14 REMARK 500 PRO A 253 61.48 -62.33 REMARK 500 THR A 256 137.96 -24.82 REMARK 500 PRO A 272 151.51 -41.01 REMARK 500 LEU A 314 -76.03 -102.88 REMARK 500 GLN A 316 125.43 -179.79 REMARK 500 PRO A 353 99.90 -60.06 REMARK 500 ALA A 354 100.10 -33.30 REMARK 500 GLN A 355 -35.51 151.76 REMARK 500 PRO A 362 91.37 -68.11 REMARK 500 ASP A 365 129.48 -25.26 REMARK 500 ASN A 378 22.61 -160.85 REMARK 500 LYS A 379 -3.65 89.79 REMARK 500 SER A 382 130.77 175.01 REMARK 500 PHE A 404 -167.12 -119.48 REMARK 500 GLU A 405 113.87 -166.52 REMARK 500 PHE A 413 112.64 -169.14 REMARK 500 TYR B 17 82.60 45.80 REMARK 500 GLU B 20 109.09 -37.85 REMARK 500 ALA B 33 90.04 178.74 REMARK 500 THR B 38 60.03 -44.27 REMARK 500 MET B 39 18.75 -169.92 REMARK 500 ALA B 49 149.35 -178.46 REMARK 500 SER B 64 46.26 -96.86 REMARK 500 ASN B 72 79.97 41.18 REMARK 500 ILE B 88 -34.15 -142.24 REMARK 500 LEU B 104 134.28 -175.77 REMARK 500 GLU B 107 120.38 -173.38 REMARK 500 ASN B 137 -151.32 -135.10 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 335 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T16 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LONG-CHAIN FATTY ACID TRANSPORTER FADL REMARK 900 (WILD-TYPE, MONOCLINIC SPACE GROUP P21) REMARK 900 RELATED ID: 1T1L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LONG-CHAIN FATTY ACID TRANSPORTER FADL REMARK 900 (HEXAGONAL SPACE GROUP P3121) REMARK 900 RELATED ID: 2R4L RELATED DB: PDB REMARK 900 FADL MUTANT P34A REMARK 900 RELATED ID: 2R4M RELATED DB: PDB REMARK 900 FADL MUTANT A77E/S100R REMARK 900 RELATED ID: 2R4O RELATED DB: PDB REMARK 900 FADL MUTANT DELTA NPA REMARK 900 RELATED ID: 2R4P RELATED DB: PDB REMARK 900 FADL MUTANT G212E REMARK 900 RELATED ID: 2R88 RELATED DB: PDB REMARK 900 FADL MUTANT DELTA S3 KINK REMARK 900 RELATED ID: 2R89 RELATED DB: PDB REMARK 900 FADL MUTANT DELTA N3 REMARK 900 RELATED ID: 2R8A RELATED DB: PDB REMARK 900 FADL MUTANT DELTA N8 REMARK 900 RELATED ID: 3DWO RELATED DB: PDB REMARK 900 FADL HOMOLOGUE IN PSEUDOMONAS AERUGINOSA REMARK 900 RELATED ID: 3DWN RELATED DB: PDB REMARK 900 FADL MUTANT A77E/S100R DBREF 2R4N A 1 421 UNP P10384 FADL_ECOLI 26 446 DBREF 2R4N B 1 421 UNP P10384 FADL_ECOLI 26 446 SEQADV 2R4N ALA A 33 UNP P10384 ASN 58 ENGINEERED MUTATION SEQADV 2R4N THR A 197 UNP P10384 ILE 222 CONFLICT SEQADV 2R4N HIS A 422 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS A 423 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS A 424 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS A 425 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS A 426 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS A 427 UNP P10384 EXPRESSION TAG SEQADV 2R4N ALA B 33 UNP P10384 ASN 58 ENGINEERED MUTATION SEQADV 2R4N THR B 197 UNP P10384 ILE 222 CONFLICT SEQADV 2R4N HIS B 422 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS B 423 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS B 424 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS B 425 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS B 426 UNP P10384 EXPRESSION TAG SEQADV 2R4N HIS B 427 UNP P10384 EXPRESSION TAG SEQRES 1 A 427 ALA GLY PHE GLN LEU ASN GLU PHE SER SER SER GLY LEU SEQRES 2 A 427 GLY ARG ALA TYR SER GLY GLU GLY ALA ILE ALA ASP ASP SEQRES 3 A 427 ALA GLY ASN VAL SER ARG ALA PRO ALA LEU ILE THR MET SEQRES 4 A 427 PHE ASP ARG PRO THR PHE SER ALA GLY ALA VAL TYR ILE SEQRES 5 A 427 ASP PRO ASP VAL ASN ILE SER GLY THR SER PRO SER GLY SEQRES 6 A 427 ARG SER LEU LYS ALA ASP ASN ILE ALA PRO THR ALA TRP SEQRES 7 A 427 VAL PRO ASN MET HIS PHE VAL ALA PRO ILE ASN ASP GLN SEQRES 8 A 427 PHE GLY TRP GLY ALA SER ILE THR SER ASN TYR GLY LEU SEQRES 9 A 427 ALA THR GLU PHE ASN ASP THR TYR ALA GLY GLY SER VAL SEQRES 10 A 427 GLY GLY THR THR ASP LEU GLU THR MET ASN LEU ASN LEU SEQRES 11 A 427 SER GLY ALA TYR ARG LEU ASN ASN ALA TRP SER PHE GLY SEQRES 12 A 427 LEU GLY PHE ASN ALA VAL TYR ALA ARG ALA LYS ILE GLU SEQRES 13 A 427 ARG PHE ALA GLY ASP LEU GLY GLN LEU VAL ALA GLY GLN SEQRES 14 A 427 ILE MET GLN SER PRO ALA GLY GLN THR GLN GLN GLY GLN SEQRES 15 A 427 ALA LEU ALA ALA THR ALA ASN GLY ILE ASP SER ASN THR SEQRES 16 A 427 LYS THR ALA HIS LEU ASN GLY ASN GLN TRP GLY PHE GLY SEQRES 17 A 427 TRP ASN ALA GLY ILE LEU TYR GLU LEU ASP LYS ASN ASN SEQRES 18 A 427 ARG TYR ALA LEU THR TYR ARG SER GLU VAL LYS ILE ASP SEQRES 19 A 427 PHE LYS GLY ASN TYR SER SER ASP LEU ASN ARG ALA PHE SEQRES 20 A 427 ASN ASN TYR GLY LEU PRO ILE PRO THR ALA THR GLY GLY SEQRES 21 A 427 ALA THR GLN SER GLY TYR LEU THR LEU ASN LEU PRO GLU SEQRES 22 A 427 MET TRP GLU VAL SER GLY TYR ASN ARG VAL ASP PRO GLN SEQRES 23 A 427 TRP ALA ILE HIS TYR SER LEU ALA TYR THR SER TRP SER SEQRES 24 A 427 GLN PHE GLN GLN LEU LYS ALA THR SER THR SER GLY ASP SEQRES 25 A 427 THR LEU PHE GLN LYS HIS GLU GLY PHE LYS ASP ALA TYR SEQRES 26 A 427 ARG ILE ALA LEU GLY THR THR TYR TYR TYR ASP ASP ASN SEQRES 27 A 427 TRP THR PHE ARG THR GLY ILE ALA PHE ASP ASP SER PRO SEQRES 28 A 427 VAL PRO ALA GLN ASN ARG SER ILE SER ILE PRO ASP GLN SEQRES 29 A 427 ASP ARG PHE TRP LEU SER ALA GLY THR THR TYR ALA PHE SEQRES 30 A 427 ASN LYS ASP ALA SER VAL ASP VAL GLY VAL SER TYR MET SEQRES 31 A 427 HIS GLY GLN SER VAL LYS ILE ASN GLU GLY PRO TYR GLN SEQRES 32 A 427 PHE GLU SER GLU GLY LYS ALA TRP LEU PHE GLY THR ASN SEQRES 33 A 427 PHE ASN TYR ALA PHE HIS HIS HIS HIS HIS HIS SEQRES 1 B 427 ALA GLY PHE GLN LEU ASN GLU PHE SER SER SER GLY LEU SEQRES 2 B 427 GLY ARG ALA TYR SER GLY GLU GLY ALA ILE ALA ASP ASP SEQRES 3 B 427 ALA GLY ASN VAL SER ARG ALA PRO ALA LEU ILE THR MET SEQRES 4 B 427 PHE ASP ARG PRO THR PHE SER ALA GLY ALA VAL TYR ILE SEQRES 5 B 427 ASP PRO ASP VAL ASN ILE SER GLY THR SER PRO SER GLY SEQRES 6 B 427 ARG SER LEU LYS ALA ASP ASN ILE ALA PRO THR ALA TRP SEQRES 7 B 427 VAL PRO ASN MET HIS PHE VAL ALA PRO ILE ASN ASP GLN SEQRES 8 B 427 PHE GLY TRP GLY ALA SER ILE THR SER ASN TYR GLY LEU SEQRES 9 B 427 ALA THR GLU PHE ASN ASP THR TYR ALA GLY GLY SER VAL SEQRES 10 B 427 GLY GLY THR THR ASP LEU GLU THR MET ASN LEU ASN LEU SEQRES 11 B 427 SER GLY ALA TYR ARG LEU ASN ASN ALA TRP SER PHE GLY SEQRES 12 B 427 LEU GLY PHE ASN ALA VAL TYR ALA ARG ALA LYS ILE GLU SEQRES 13 B 427 ARG PHE ALA GLY ASP LEU GLY GLN LEU VAL ALA GLY GLN SEQRES 14 B 427 ILE MET GLN SER PRO ALA GLY GLN THR GLN GLN GLY GLN SEQRES 15 B 427 ALA LEU ALA ALA THR ALA ASN GLY ILE ASP SER ASN THR SEQRES 16 B 427 LYS THR ALA HIS LEU ASN GLY ASN GLN TRP GLY PHE GLY SEQRES 17 B 427 TRP ASN ALA GLY ILE LEU TYR GLU LEU ASP LYS ASN ASN SEQRES 18 B 427 ARG TYR ALA LEU THR TYR ARG SER GLU VAL LYS ILE ASP SEQRES 19 B 427 PHE LYS GLY ASN TYR SER SER ASP LEU ASN ARG ALA PHE SEQRES 20 B 427 ASN ASN TYR GLY LEU PRO ILE PRO THR ALA THR GLY GLY SEQRES 21 B 427 ALA THR GLN SER GLY TYR LEU THR LEU ASN LEU PRO GLU SEQRES 22 B 427 MET TRP GLU VAL SER GLY TYR ASN ARG VAL ASP PRO GLN SEQRES 23 B 427 TRP ALA ILE HIS TYR SER LEU ALA TYR THR SER TRP SER SEQRES 24 B 427 GLN PHE GLN GLN LEU LYS ALA THR SER THR SER GLY ASP SEQRES 25 B 427 THR LEU PHE GLN LYS HIS GLU GLY PHE LYS ASP ALA TYR SEQRES 26 B 427 ARG ILE ALA LEU GLY THR THR TYR TYR TYR ASP ASP ASN SEQRES 27 B 427 TRP THR PHE ARG THR GLY ILE ALA PHE ASP ASP SER PRO SEQRES 28 B 427 VAL PRO ALA GLN ASN ARG SER ILE SER ILE PRO ASP GLN SEQRES 29 B 427 ASP ARG PHE TRP LEU SER ALA GLY THR THR TYR ALA PHE SEQRES 30 B 427 ASN LYS ASP ALA SER VAL ASP VAL GLY VAL SER TYR MET SEQRES 31 B 427 HIS GLY GLN SER VAL LYS ILE ASN GLU GLY PRO TYR GLN SEQRES 32 B 427 PHE GLU SER GLU GLY LYS ALA TRP LEU PHE GLY THR ASN SEQRES 33 B 427 PHE ASN TYR ALA PHE HIS HIS HIS HIS HIS HIS HET LDA A 501 16 HET LDA B 502 16 HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE FORMUL 3 LDA 2(C14 H31 N O) HELIX 1 1 SER A 9 ARG A 15 1 7 HELIX 2 2 ASP A 26 ARG A 32 5 7 HELIX 3 3 ALA A 33 THR A 38 5 6 HELIX 4 4 ALA A 113 VAL A 117 5 5 HELIX 5 5 ASP A 161 GLN A 172 1 12 HELIX 6 6 THR A 178 ASN A 189 1 12 HELIX 7 7 TRP A 298 PHE A 301 5 4 HELIX 8 8 SER B 9 ARG B 15 1 7 HELIX 9 9 ASP B 26 THR B 38 5 13 HELIX 10 10 ASP B 161 GLN B 172 1 12 HELIX 11 11 PRO B 174 THR B 178 5 5 HELIX 12 12 GLN B 182 GLY B 190 1 9 HELIX 13 13 ASN B 244 ASN B 248 5 5 HELIX 14 14 TRP B 298 PHE B 301 5 4 SHEET 1 A10 TYR A 402 ALA A 420 0 SHEET 2 A10 THR A 44 SER A 59 -1 N TYR A 51 O PHE A 413 SHEET 3 A10 ALA A 77 ASN A 89 -1 O VAL A 85 N THR A 44 SHEET 4 A10 PHE A 92 THR A 99 -1 O PHE A 92 N ASN A 89 SHEET 5 A10 THR A 120 ARG A 135 -1 O ASN A 127 N THR A 99 SHEET 6 A10 LEU A 104 GLU A 107 -1 N LEU A 104 O LEU A 123 SHEET 7 A10 THR A 120 ARG A 135 -1 O LEU A 123 N LEU A 104 SHEET 8 A10 TRP A 140 ALA A 159 -1 O LEU A 144 N GLY A 132 SHEET 9 A10 THR A 195 ASP A 218 -1 O GLY A 206 N VAL A 149 SHEET 10 A10 ASN A 238 SER A 240 -1 O ASN A 238 N ASN A 201 SHEET 1 B10 THR A 195 ASP A 218 0 SHEET 2 B10 ASN A 221 ARG A 228 -1 O ASN A 221 N LEU A 217 SHEET 3 B10 MET A 274 ARG A 282 -1 O SER A 278 N ALA A 224 SHEET 4 B10 TRP A 287 THR A 296 -1 O ILE A 289 N ASN A 281 SHEET 5 B10 ALA A 324 TYR A 333 -1 O ARG A 326 N ALA A 294 SHEET 6 B10 TRP A 339 ASP A 348 -1 O PHE A 341 N TYR A 333 SHEET 7 B10 ARG A 366 ALA A 376 -1 O GLY A 372 N ARG A 342 SHEET 8 B10 ALA A 381 HIS A 391 -1 O TYR A 389 N LEU A 369 SHEET 9 B10 TYR A 402 ALA A 420 -1 O LEU A 412 N SER A 388 SHEET 10 B10 VAL A 395 GLU A 399 -1 N ILE A 397 O PHE A 404 SHEET 1 C 2 THR A 61 SER A 62 0 SHEET 2 C 2 ARG A 66 SER A 67 -1 O ARG A 66 N SER A 62 SHEET 1 D 2 VAL A 231 ASP A 234 0 SHEET 2 D 2 THR A 268 LEU A 271 -1 O LEU A 271 N VAL A 231 SHEET 1 E 2 GLN A 303 THR A 307 0 SHEET 2 E 2 THR A 313 HIS A 318 -1 O PHE A 315 N ALA A 306 SHEET 1 F10 PHE B 404 ALA B 420 0 SHEET 2 F10 THR B 44 GLY B 60 -1 N PHE B 45 O TYR B 419 SHEET 3 F10 ALA B 77 VAL B 85 -1 O VAL B 85 N THR B 44 SHEET 4 F10 PHE B 92 THR B 99 -1 O ALA B 96 N PHE B 84 SHEET 5 F10 THR B 120 ARG B 135 -1 O ASN B 127 N THR B 99 SHEET 6 F10 GLY B 103 GLU B 107 -1 N THR B 106 O THR B 121 SHEET 7 F10 THR B 120 ARG B 135 -1 O THR B 121 N THR B 106 SHEET 8 F10 TRP B 140 ARG B 157 -1 O LEU B 144 N GLY B 132 SHEET 9 F10 ALA B 198 GLN B 204 -1 O LEU B 200 N ILE B 155 SHEET 10 F10 ASN B 221 ARG B 228 0 SHEET 1 G10 ALA B 198 GLN B 204 0 SHEET 2 G10 PHE B 207 ASP B 218 0 SHEET 3 G10 MET B 274 ARG B 282 0 SHEET 4 G10 TRP B 287 THR B 296 -1 O ILE B 289 N ASN B 281 SHEET 5 G10 ALA B 324 TYR B 334 -1 O GLY B 330 N HIS B 290 SHEET 6 G10 THR B 340 ASP B 348 -1 O PHE B 347 N ILE B 327 SHEET 7 G10 ARG B 366 ALA B 376 -1 O ARG B 366 N ASP B 348 SHEET 8 G10 ALA B 381 HIS B 391 -1 O TYR B 389 N LEU B 369 SHEET 9 G10 PHE B 404 ALA B 420 -1 O ALA B 410 N MET B 390 SHEET 10 G10 VAL B 395 ILE B 397 -1 N VAL B 395 O SER B 406 SHEET 1 H 2 VAL B 231 ASP B 234 0 SHEET 2 H 2 THR B 268 LEU B 271 -1 O LEU B 269 N ILE B 233 SHEET 1 I 2 GLN B 303 THR B 307 0 SHEET 2 I 2 THR B 313 HIS B 318 -1 O LYS B 317 N LEU B 304 SITE 1 AC1 11 LEU A 104 THR A 121 ALA A 153 ILE A 155 SITE 2 AC1 11 LEU A 200 ASN A 201 GLY A 237 LEU A 267 SITE 3 AC1 11 LEU A 304 GLU A 319 ILE A 361 SITE 1 AC2 12 LEU B 104 THR B 121 ALA B 153 ILE B 155 SITE 2 AC2 12 ARG B 157 ASN B 201 GLY B 202 GLY B 237 SITE 3 AC2 12 LEU B 267 LEU B 304 GLU B 319 ILE B 361 CRYST1 70.206 39.986 174.996 90.00 89.98 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014244 0.000000 -0.000005 0.00000 SCALE2 0.000000 0.025009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005714 0.00000