HEADER CYTOKINE, HORMONE/GROWTH FACTOR 25-SEP-07 2RE9 TITLE CRYSTAL STRUCTURE OF TL1A AT 2.1 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF SUPERFAMILY LIGAND TL1A; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: SOLUBLE PART: RESIDUES 72-251; COMPND 5 SYNONYM: TUMOR NECROSIS FACTOR (LIGAND) SUPERFAMILY, MEMBER 15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNFSF15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS VEGI, HOMOTRIMER, METAL BINDING, CYTOKINE, MEMBRANE, TRANSMEMBRANE, KEYWDS 2 HORMONE-GROWTH FACTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.C.JIN,F.GUO,S.KIM,A.J.HOWARD,Y.Z.ZHANG REVDAT 7 20-NOV-24 2RE9 1 REMARK REVDAT 6 30-AUG-23 2RE9 1 REMARK SEQADV LINK REVDAT 5 25-OCT-17 2RE9 1 REMARK REVDAT 4 13-JUL-11 2RE9 1 VERSN REVDAT 3 24-FEB-09 2RE9 1 VERSN REVDAT 2 30-OCT-07 2RE9 1 JRNL REVDAT 1 09-OCT-07 2RE9 0 JRNL AUTH T.JIN,F.GUO,S.KIM,A.HOWARD,Y.Z.ZHANG JRNL TITL X-RAY CRYSTAL STRUCTURE OF TNF LIGAND FAMILY MEMBER TL1A AT JRNL TITL 2 2.1 A. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 364 1 2007 JRNL REFN ISSN 0006-291X JRNL PMID 17935696 JRNL DOI 10.1016/J.BBRC.2007.09.097 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.C.JIN,F.GUO,S.KIM,A.J.HOWARD,Y.Z.ZHANG REMARK 1 TITL PURIFICATION AND CRYSTALLIZATION OF RECOMBINANT HUMAN REMARK 1 TITL 2 TNF-LIKE LIGAND TL1A REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 43958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 2194 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3945 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.349 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 78.26 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:GLYCEROL.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RE9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044755. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.86 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : ID REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.96000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1A8M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE, PH 6.86, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.67300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.45550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.83650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.45550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 89.50950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.45550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.83650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.45550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.45550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 89.50950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.67300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT BIOLOGICAL UNIT IS THE SAME AS REMARK 300 ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7660 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 LEU A 1 REMARK 465 LYS A 2 REMARK 465 GLY A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 5 REMARK 465 PHE A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 HIS A 10 REMARK 465 GLN A 11 REMARK 465 GLN A 12 REMARK 465 VAL A 13 REMARK 465 TYR A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 GLY B 0 REMARK 465 LEU B 1 REMARK 465 LYS B 2 REMARK 465 GLY B 3 REMARK 465 GLN B 4 REMARK 465 GLU B 5 REMARK 465 PHE B 6 REMARK 465 ALA B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 HIS B 10 REMARK 465 GLN B 11 REMARK 465 GLN B 12 REMARK 465 VAL B 13 REMARK 465 TYR B 14 REMARK 465 ALA B 15 REMARK 465 PRO B 16 REMARK 465 GLY C 0 REMARK 465 LEU C 1 REMARK 465 LYS C 2 REMARK 465 GLY C 3 REMARK 465 GLN C 4 REMARK 465 GLU C 5 REMARK 465 PHE C 6 REMARK 465 ALA C 7 REMARK 465 PRO C 8 REMARK 465 SER C 9 REMARK 465 HIS C 10 REMARK 465 GLN C 11 REMARK 465 GLN C 12 REMARK 465 VAL C 13 REMARK 465 TYR C 14 REMARK 465 ALA C 15 REMARK 465 PRO C 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE B 39 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 309 O HOH A 309 7555 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 59.96 -91.46 REMARK 500 ASP A 22 29.18 -79.34 REMARK 500 GLU A 51 -4.22 -141.80 REMARK 500 ARG A 60 -10.58 84.11 REMARK 500 SER A 89 -155.72 -74.43 REMARK 500 GLN A 96 94.54 -49.01 REMARK 500 ALA A 97 18.17 -170.70 REMARK 500 PRO A 118 30.25 -99.67 REMARK 500 ARG B 18 -158.18 -103.85 REMARK 500 ALA B 19 -12.77 -145.78 REMARK 500 ASN B 41 49.90 -92.22 REMARK 500 GLN B 42 151.84 175.74 REMARK 500 GLU B 51 -13.67 -144.29 REMARK 500 ARG B 60 -5.66 78.84 REMARK 500 LYS B 66 -0.84 72.25 REMARK 500 GLN B 96 3.99 -68.74 REMARK 500 SER B 116 -84.81 -71.92 REMARK 500 CYS B 131 64.79 -156.66 REMARK 500 GLU C 51 -25.39 -141.63 REMARK 500 ARG C 60 -6.98 81.83 REMARK 500 LYS C 66 -16.45 76.18 REMARK 500 SER C 80 147.72 -170.78 REMARK 500 SER C 89 -168.04 -69.94 REMARK 500 GLU C 93 -141.82 -146.24 REMARK 500 ARG C 95 -153.04 -86.15 REMARK 500 GLN C 96 -157.97 -92.71 REMARK 500 ALA C 97 47.27 -80.22 REMARK 500 CYS C 131 60.02 -163.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 181 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 183 O REMARK 620 2 HOH A 184 O 87.3 REMARK 620 3 HOH A 185 O 93.0 87.2 REMARK 620 4 HOH A 186 O 88.2 95.3 177.3 REMARK 620 5 HOH A 187 O 85.8 172.8 91.4 86.3 REMARK 620 6 HOH A 188 O 174.4 96.4 83.0 95.7 90.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 181 DBREF 2RE9 A 1 180 UNP Q8NFE9 Q8NFE9_HUMAN 72 251 DBREF 2RE9 B 1 180 UNP Q8NFE9 Q8NFE9_HUMAN 72 251 DBREF 2RE9 C 1 180 UNP Q8NFE9 Q8NFE9_HUMAN 72 251 SEQADV 2RE9 GLY A 0 UNP Q8NFE9 EXPRESSION TAG SEQADV 2RE9 GLY B 0 UNP Q8NFE9 EXPRESSION TAG SEQADV 2RE9 GLY C 0 UNP Q8NFE9 EXPRESSION TAG SEQRES 1 A 181 GLY LEU LYS GLY GLN GLU PHE ALA PRO SER HIS GLN GLN SEQRES 2 A 181 VAL TYR ALA PRO LEU ARG ALA ASP GLY ASP LYS PRO ARG SEQRES 3 A 181 ALA HIS LEU THR VAL VAL ARG GLN THR PRO THR GLN HIS SEQRES 4 A 181 PHE LYS ASN GLN PHE PRO ALA LEU HIS TRP GLU HIS GLU SEQRES 5 A 181 LEU GLY LEU ALA PHE THR LYS ASN ARG MET ASN TYR THR SEQRES 6 A 181 ASN LYS PHE LEU LEU ILE PRO GLU SER GLY ASP TYR PHE SEQRES 7 A 181 ILE TYR SER GLN VAL THR PHE ARG GLY MET THR SER GLU SEQRES 8 A 181 CYS SER GLU ILE ARG GLN ALA GLY ARG PRO ASN LYS PRO SEQRES 9 A 181 ASP SER ILE THR VAL VAL ILE THR LYS VAL THR ASP SER SEQRES 10 A 181 TYR PRO GLU PRO THR GLN LEU LEU MET GLY THR LYS SER SEQRES 11 A 181 VAL CYS GLU VAL GLY SER ASN TRP PHE GLN PRO ILE TYR SEQRES 12 A 181 LEU GLY ALA MET PHE SER LEU GLN GLU GLY ASP LYS LEU SEQRES 13 A 181 MET VAL ASN VAL SER ASP ILE SER LEU VAL ASP TYR THR SEQRES 14 A 181 LYS GLU ASP LYS THR PHE PHE GLY ALA PHE LEU LEU SEQRES 1 B 181 GLY LEU LYS GLY GLN GLU PHE ALA PRO SER HIS GLN GLN SEQRES 2 B 181 VAL TYR ALA PRO LEU ARG ALA ASP GLY ASP LYS PRO ARG SEQRES 3 B 181 ALA HIS LEU THR VAL VAL ARG GLN THR PRO THR GLN HIS SEQRES 4 B 181 PHE LYS ASN GLN PHE PRO ALA LEU HIS TRP GLU HIS GLU SEQRES 5 B 181 LEU GLY LEU ALA PHE THR LYS ASN ARG MET ASN TYR THR SEQRES 6 B 181 ASN LYS PHE LEU LEU ILE PRO GLU SER GLY ASP TYR PHE SEQRES 7 B 181 ILE TYR SER GLN VAL THR PHE ARG GLY MET THR SER GLU SEQRES 8 B 181 CYS SER GLU ILE ARG GLN ALA GLY ARG PRO ASN LYS PRO SEQRES 9 B 181 ASP SER ILE THR VAL VAL ILE THR LYS VAL THR ASP SER SEQRES 10 B 181 TYR PRO GLU PRO THR GLN LEU LEU MET GLY THR LYS SER SEQRES 11 B 181 VAL CYS GLU VAL GLY SER ASN TRP PHE GLN PRO ILE TYR SEQRES 12 B 181 LEU GLY ALA MET PHE SER LEU GLN GLU GLY ASP LYS LEU SEQRES 13 B 181 MET VAL ASN VAL SER ASP ILE SER LEU VAL ASP TYR THR SEQRES 14 B 181 LYS GLU ASP LYS THR PHE PHE GLY ALA PHE LEU LEU SEQRES 1 C 181 GLY LEU LYS GLY GLN GLU PHE ALA PRO SER HIS GLN GLN SEQRES 2 C 181 VAL TYR ALA PRO LEU ARG ALA ASP GLY ASP LYS PRO ARG SEQRES 3 C 181 ALA HIS LEU THR VAL VAL ARG GLN THR PRO THR GLN HIS SEQRES 4 C 181 PHE LYS ASN GLN PHE PRO ALA LEU HIS TRP GLU HIS GLU SEQRES 5 C 181 LEU GLY LEU ALA PHE THR LYS ASN ARG MET ASN TYR THR SEQRES 6 C 181 ASN LYS PHE LEU LEU ILE PRO GLU SER GLY ASP TYR PHE SEQRES 7 C 181 ILE TYR SER GLN VAL THR PHE ARG GLY MET THR SER GLU SEQRES 8 C 181 CYS SER GLU ILE ARG GLN ALA GLY ARG PRO ASN LYS PRO SEQRES 9 C 181 ASP SER ILE THR VAL VAL ILE THR LYS VAL THR ASP SER SEQRES 10 C 181 TYR PRO GLU PRO THR GLN LEU LEU MET GLY THR LYS SER SEQRES 11 C 181 VAL CYS GLU VAL GLY SER ASN TRP PHE GLN PRO ILE TYR SEQRES 12 C 181 LEU GLY ALA MET PHE SER LEU GLN GLU GLY ASP LYS LEU SEQRES 13 C 181 MET VAL ASN VAL SER ASP ILE SER LEU VAL ASP TYR THR SEQRES 14 C 181 LYS GLU ASP LYS THR PHE PHE GLY ALA PHE LEU LEU HET MG A 181 1 HET GOL A 182 6 HET GOL B 181 6 HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 MG MG 2+ FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *500(H2 O) HELIX 1 1 ASP A 161 VAL A 165 5 5 HELIX 2 2 ASP B 161 VAL B 165 5 5 HELIX 3 3 ALA C 19 LYS C 23 5 5 HELIX 4 4 ASP C 161 VAL C 165 5 5 SHEET 1 A 3 TRP A 48 GLU A 49 0 SHEET 2 A 3 ARG A 25 VAL A 30 -1 N THR A 29 O GLU A 49 SHEET 3 A 3 PHE A 56 LYS A 58 -1 O PHE A 56 N HIS A 27 SHEET 1 B 5 TRP A 48 GLU A 49 0 SHEET 2 B 5 ARG A 25 VAL A 30 -1 N THR A 29 O GLU A 49 SHEET 3 B 5 PHE A 174 LEU A 179 -1 O PHE A 175 N LEU A 28 SHEET 4 B 5 GLY A 74 MET A 87 -1 N TYR A 79 O GLY A 176 SHEET 5 B 5 ASN A 136 LEU A 149 -1 O LEU A 149 N GLY A 74 SHEET 1 C 5 ASN A 62 THR A 64 0 SHEET 2 C 5 PHE A 67 LEU A 69 -1 O LEU A 69 N ASN A 62 SHEET 3 C 5 LYS A 154 VAL A 159 -1 O LEU A 155 N LEU A 68 SHEET 4 C 5 ASP A 104 VAL A 113 -1 N VAL A 109 O ASN A 158 SHEET 5 C 5 THR A 121 VAL A 130 -1 O VAL A 130 N ASP A 104 SHEET 1 D 3 TRP B 48 GLU B 49 0 SHEET 2 D 3 ARG B 25 VAL B 30 -1 N THR B 29 O GLU B 49 SHEET 3 D 3 PHE B 56 LYS B 58 -1 O LYS B 58 N ARG B 25 SHEET 1 E 5 TRP B 48 GLU B 49 0 SHEET 2 E 5 ARG B 25 VAL B 30 -1 N THR B 29 O GLU B 49 SHEET 3 E 5 PHE B 174 LEU B 179 -1 O PHE B 175 N LEU B 28 SHEET 4 E 5 GLY B 74 MET B 87 -1 N TYR B 79 O GLY B 176 SHEET 5 E 5 ASN B 136 LEU B 149 -1 O LEU B 149 N GLY B 74 SHEET 1 F 5 ASN B 62 THR B 64 0 SHEET 2 F 5 PHE B 67 LEU B 69 -1 O LEU B 69 N ASN B 62 SHEET 3 F 5 LYS B 154 VAL B 159 -1 O LEU B 155 N LEU B 68 SHEET 4 F 5 ASP B 104 VAL B 113 -1 N VAL B 109 O ASN B 158 SHEET 5 F 5 THR B 121 VAL B 130 -1 O VAL B 130 N ASP B 104 SHEET 1 G 3 TRP C 48 GLU C 49 0 SHEET 2 G 3 ARG C 25 VAL C 30 -1 N THR C 29 O GLU C 49 SHEET 3 G 3 PHE C 56 LYS C 58 -1 O LYS C 58 N ARG C 25 SHEET 1 H 5 TRP C 48 GLU C 49 0 SHEET 2 H 5 ARG C 25 VAL C 30 -1 N THR C 29 O GLU C 49 SHEET 3 H 5 PHE C 174 LEU C 179 -1 O PHE C 175 N LEU C 28 SHEET 4 H 5 GLY C 74 MET C 87 -1 N TYR C 79 O GLY C 176 SHEET 5 H 5 ASN C 136 LEU C 149 -1 O GLN C 139 N PHE C 84 SHEET 1 I 5 ASN C 62 THR C 64 0 SHEET 2 I 5 PHE C 67 LEU C 69 -1 O LEU C 69 N ASN C 62 SHEET 3 I 5 LYS C 154 VAL C 159 -1 O LEU C 155 N LEU C 68 SHEET 4 I 5 ASP C 104 THR C 114 -1 N VAL C 109 O ASN C 158 SHEET 5 I 5 TYR C 117 VAL C 130 -1 O GLY C 126 N VAL C 108 SSBOND 1 CYS A 91 CYS A 131 1555 1555 2.04 SSBOND 2 CYS B 91 CYS B 131 1555 1555 2.03 SSBOND 3 CYS C 91 CYS C 131 1555 1555 2.03 LINK MG MG A 181 O HOH A 183 1555 1555 2.32 LINK MG MG A 181 O HOH A 184 1555 1555 2.28 LINK MG MG A 181 O HOH A 185 1555 1555 2.34 LINK MG MG A 181 O HOH A 186 1555 1555 2.32 LINK MG MG A 181 O HOH A 187 1555 1555 2.44 LINK MG MG A 181 O HOH A 188 1555 1555 2.38 CISPEP 1 TYR A 117 PRO A 118 0 -0.22 SITE 1 AC1 6 HOH A 183 HOH A 184 HOH A 185 HOH A 186 SITE 2 AC1 6 HOH A 187 HOH A 188 SITE 1 AC2 8 LYS A 128 TYR A 142 HOH A 197 HOH A 201 SITE 2 AC2 8 LYS B 128 ILE B 141 TYR B 142 LYS C 128 SITE 1 AC3 5 THR A 64 ASN A 65 THR B 57 LYS B 58 SITE 2 AC3 5 HOH B 189 CRYST1 114.911 114.911 119.346 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008702 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008379 0.00000