data_2RFK # _entry.id 2RFK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RFK pdb_00002rfk 10.2210/pdb2rfk/pdb NDB PR0309 ? ? RCSB RCSB044797 ? ? WWPDB D_1000044797 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetDB Pfu-1661227-001 . unspecified TargetDB Pfu-1095826-001 . unspecified TargetDB Pfu-1665068-001 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2RFK _pdbx_database_status.recvd_initial_deposition_date 2007-09-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liang, B.' 1 'Xue, S.' 2 'Terns, R.M.' 3 'Terns, M.P.' 4 'Li, H.' 5 'Southeast Collaboratory for Structural Genomics (SECSG)' 6 # _citation.id primary _citation.title 'Substrate RNA positioning in the archaeal H/ACA ribonucleoprotein complex.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 14 _citation.page_first 1189 _citation.page_last 1195 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18059286 _citation.pdbx_database_id_DOI 10.1038/nsmb1336 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liang, B.' 1 ? primary 'Xue, S.' 2 ? primary 'Terns, R.M.' 3 ? primary 'Terns, M.P.' 4 ? primary 'Li, H.' 5 ? # _cell.entry_id 2RFK _cell.length_a 96.561 _cell.length_b 96.561 _cell.length_c 240.978 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2RFK _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'guide RNA 1' 6797.132 1 ? ? ? ? 2 polymer syn 'guide RNA 2' 8229.945 1 ? ? ? ? 3 polymer syn 'target RNA' 4535.716 1 ? ? ? ? 4 polymer man 'Probable tRNA pseudouridine synthase B' 37862.188 1 5.4.99.- D85A ? ? 5 polymer man 'Ribosome biogenesis protein Nop10' 6352.509 1 ? ? ? ? 6 polymer man 'Small nucleolar rnp similar to gar1' 8515.109 1 ? ? ? ? 7 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name 'tRNA pseudouridine 55 synthase, Psi55 synthase, tRNA-uridine isomerase, tRNA pseudouridylate synthase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGGCUCCGGAAACCGCGGCGC GGGCUCCGGAAACCGCGGCGC D ? 2 polyribonucleotide no no GCGCUUCGCUCCCGGAGCCCACACUA GCGCUUCGCUCCCGGAGCCCACACUA E ? 3 polyribonucleotide no no GGAGCGUGCGGUUU GGAGCGUGCGGUUU F ? 4 'polypeptide(L)' no no ;EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLAPK VSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIE GRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPME KAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVF MPRDWYPKLWEKRD ; ;EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLAPK VSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIE GRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPME KAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVF MPRDWYPKLWEKRD ; A Pfu-1661227-001 5 'polypeptide(L)' no no FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI B Pfu-1095826-001 6 'polypeptide(L)' no no MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDE MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDE C 'Pfu-1665068-001 ' # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 C n 1 5 U n 1 6 C n 1 7 C n 1 8 G n 1 9 G n 1 10 A n 1 11 A n 1 12 A n 1 13 C n 1 14 C n 1 15 G n 1 16 C n 1 17 G n 1 18 G n 1 19 C n 1 20 G n 1 21 C n 2 1 G n 2 2 C n 2 3 G n 2 4 C n 2 5 U n 2 6 U n 2 7 C n 2 8 G n 2 9 C n 2 10 U n 2 11 C n 2 12 C n 2 13 C n 2 14 G n 2 15 G n 2 16 A n 2 17 G n 2 18 C n 2 19 C n 2 20 C n 2 21 A n 2 22 C n 2 23 A n 2 24 C n 2 25 U n 2 26 A n 3 1 G n 3 2 G n 3 3 A n 3 4 G n 3 5 C n 3 6 G n 3 7 U n 3 8 G n 3 9 C n 3 10 G n 3 11 G n 3 12 U n 3 13 U n 3 14 U n 4 1 GLU n 4 2 VAL n 4 3 ARG n 4 4 ARG n 4 5 ILE n 4 6 LEU n 4 7 PRO n 4 8 ALA n 4 9 ASP n 4 10 ILE n 4 11 LYS n 4 12 ARG n 4 13 GLU n 4 14 VAL n 4 15 LEU n 4 16 ILE n 4 17 LYS n 4 18 ASP n 4 19 GLU n 4 20 ASN n 4 21 ALA n 4 22 GLU n 4 23 THR n 4 24 ASN n 4 25 PRO n 4 26 ASP n 4 27 TRP n 4 28 GLY n 4 29 PHE n 4 30 PRO n 4 31 PRO n 4 32 GLU n 4 33 LYS n 4 34 ARG n 4 35 PRO n 4 36 ILE n 4 37 GLU n 4 38 MET n 4 39 HIS n 4 40 ILE n 4 41 GLN n 4 42 PHE n 4 43 GLY n 4 44 VAL n 4 45 ILE n 4 46 ASN n 4 47 LEU n 4 48 ASP n 4 49 LYS n 4 50 PRO n 4 51 PRO n 4 52 GLY n 4 53 PRO n 4 54 THR n 4 55 SER n 4 56 HIS n 4 57 GLU n 4 58 VAL n 4 59 VAL n 4 60 ALA n 4 61 TRP n 4 62 ILE n 4 63 LYS n 4 64 LYS n 4 65 ILE n 4 66 LEU n 4 67 ASN n 4 68 LEU n 4 69 GLU n 4 70 LYS n 4 71 ALA n 4 72 GLY n 4 73 HIS n 4 74 GLY n 4 75 GLY n 4 76 THR n 4 77 LEU n 4 78 ALA n 4 79 PRO n 4 80 LYS n 4 81 VAL n 4 82 SER n 4 83 GLY n 4 84 VAL n 4 85 LEU n 4 86 PRO n 4 87 VAL n 4 88 ALA n 4 89 LEU n 4 90 GLU n 4 91 LYS n 4 92 ALA n 4 93 THR n 4 94 ARG n 4 95 VAL n 4 96 VAL n 4 97 GLN n 4 98 ALA n 4 99 LEU n 4 100 LEU n 4 101 PRO n 4 102 ALA n 4 103 GLY n 4 104 LYS n 4 105 GLU n 4 106 TYR n 4 107 VAL n 4 108 ALA n 4 109 LEU n 4 110 MET n 4 111 HIS n 4 112 LEU n 4 113 HIS n 4 114 GLY n 4 115 ASP n 4 116 VAL n 4 117 PRO n 4 118 GLU n 4 119 ASP n 4 120 LYS n 4 121 ILE n 4 122 ILE n 4 123 GLN n 4 124 VAL n 4 125 MET n 4 126 LYS n 4 127 GLU n 4 128 PHE n 4 129 GLU n 4 130 GLY n 4 131 GLU n 4 132 ILE n 4 133 ILE n 4 134 GLN n 4 135 ARG n 4 136 PRO n 4 137 PRO n 4 138 LEU n 4 139 ARG n 4 140 SER n 4 141 ALA n 4 142 VAL n 4 143 LYS n 4 144 ARG n 4 145 ARG n 4 146 LEU n 4 147 ARG n 4 148 THR n 4 149 ARG n 4 150 LYS n 4 151 VAL n 4 152 TYR n 4 153 TYR n 4 154 ILE n 4 155 GLU n 4 156 VAL n 4 157 LEU n 4 158 GLU n 4 159 ILE n 4 160 GLU n 4 161 GLY n 4 162 ARG n 4 163 ASP n 4 164 VAL n 4 165 LEU n 4 166 PHE n 4 167 ARG n 4 168 VAL n 4 169 GLY n 4 170 VAL n 4 171 GLU n 4 172 ALA n 4 173 GLY n 4 174 THR n 4 175 TYR n 4 176 ILE n 4 177 ARG n 4 178 SER n 4 179 LEU n 4 180 ILE n 4 181 HIS n 4 182 HIS n 4 183 ILE n 4 184 GLY n 4 185 LEU n 4 186 ALA n 4 187 LEU n 4 188 GLY n 4 189 VAL n 4 190 GLY n 4 191 ALA n 4 192 HIS n 4 193 MET n 4 194 SER n 4 195 GLU n 4 196 LEU n 4 197 ARG n 4 198 ARG n 4 199 THR n 4 200 ARG n 4 201 SER n 4 202 GLY n 4 203 PRO n 4 204 PHE n 4 205 LYS n 4 206 GLU n 4 207 ASP n 4 208 GLU n 4 209 THR n 4 210 LEU n 4 211 ILE n 4 212 THR n 4 213 LEU n 4 214 HIS n 4 215 ASP n 4 216 LEU n 4 217 VAL n 4 218 ASP n 4 219 TYR n 4 220 TYR n 4 221 TYR n 4 222 PHE n 4 223 TRP n 4 224 LYS n 4 225 GLU n 4 226 ASP n 4 227 GLY n 4 228 ILE n 4 229 GLU n 4 230 GLU n 4 231 TYR n 4 232 PHE n 4 233 ARG n 4 234 LYS n 4 235 ALA n 4 236 ILE n 4 237 GLN n 4 238 PRO n 4 239 MET n 4 240 GLU n 4 241 LYS n 4 242 ALA n 4 243 VAL n 4 244 GLU n 4 245 HIS n 4 246 LEU n 4 247 PRO n 4 248 LYS n 4 249 VAL n 4 250 TRP n 4 251 ILE n 4 252 LYS n 4 253 ASP n 4 254 SER n 4 255 ALA n 4 256 VAL n 4 257 ALA n 4 258 ALA n 4 259 VAL n 4 260 THR n 4 261 HIS n 4 262 GLY n 4 263 ALA n 4 264 ASP n 4 265 LEU n 4 266 ALA n 4 267 VAL n 4 268 PRO n 4 269 GLY n 4 270 ILE n 4 271 ALA n 4 272 LYS n 4 273 LEU n 4 274 HIS n 4 275 ALA n 4 276 GLY n 4 277 ILE n 4 278 LYS n 4 279 ARG n 4 280 GLY n 4 281 ASP n 4 282 LEU n 4 283 VAL n 4 284 ALA n 4 285 ILE n 4 286 MET n 4 287 THR n 4 288 LEU n 4 289 LYS n 4 290 ASP n 4 291 GLU n 4 292 LEU n 4 293 VAL n 4 294 ALA n 4 295 LEU n 4 296 GLY n 4 297 LYS n 4 298 ALA n 4 299 MET n 4 300 MET n 4 301 THR n 4 302 SER n 4 303 GLN n 4 304 GLU n 4 305 MET n 4 306 LEU n 4 307 GLU n 4 308 LYS n 4 309 THR n 4 310 LYS n 4 311 GLY n 4 312 ILE n 4 313 ALA n 4 314 VAL n 4 315 ASP n 4 316 VAL n 4 317 GLU n 4 318 LYS n 4 319 VAL n 4 320 PHE n 4 321 MET n 4 322 PRO n 4 323 ARG n 4 324 ASP n 4 325 TRP n 4 326 TYR n 4 327 PRO n 4 328 LYS n 4 329 LEU n 4 330 TRP n 4 331 GLU n 4 332 LYS n 4 333 ARG n 4 334 ASP n 5 1 PHE n 5 2 ARG n 5 3 ILE n 5 4 ARG n 5 5 LYS n 5 6 CYS n 5 7 PRO n 5 8 LYS n 5 9 CYS n 5 10 GLY n 5 11 ARG n 5 12 TYR n 5 13 THR n 5 14 LEU n 5 15 LYS n 5 16 GLU n 5 17 VAL n 5 18 CYS n 5 19 PRO n 5 20 VAL n 5 21 CYS n 5 22 GLY n 5 23 GLU n 5 24 LYS n 5 25 THR n 5 26 LYS n 5 27 VAL n 5 28 ALA n 5 29 HIS n 5 30 PRO n 5 31 PRO n 5 32 ARG n 5 33 PHE n 5 34 SER n 5 35 PRO n 5 36 GLU n 5 37 ASP n 5 38 PRO n 5 39 TYR n 5 40 GLY n 5 41 GLU n 5 42 TYR n 5 43 ARG n 5 44 ARG n 5 45 ARG n 5 46 TRP n 5 47 LYS n 5 48 ARG n 5 49 GLU n 5 50 VAL n 5 51 LEU n 5 52 GLY n 5 53 ILE n 6 1 MET n 6 2 LYS n 6 3 ARG n 6 4 LEU n 6 5 GLY n 6 6 LYS n 6 7 VAL n 6 8 LEU n 6 9 HIS n 6 10 TYR n 6 11 ALA n 6 12 LYS n 6 13 GLN n 6 14 GLY n 6 15 PHE n 6 16 LEU n 6 17 ILE n 6 18 VAL n 6 19 ARG n 6 20 THR n 6 21 ASN n 6 22 TRP n 6 23 VAL n 6 24 PRO n 6 25 SER n 6 26 LEU n 6 27 ASN n 6 28 ASP n 6 29 ARG n 6 30 VAL n 6 31 VAL n 6 32 ASP n 6 33 LYS n 6 34 ARG n 6 35 LEU n 6 36 GLN n 6 37 PHE n 6 38 VAL n 6 39 GLY n 6 40 ILE n 6 41 VAL n 6 42 LYS n 6 43 ASP n 6 44 VAL n 6 45 PHE n 6 46 GLY n 6 47 PRO n 6 48 VAL n 6 49 LYS n 6 50 MET n 6 51 PRO n 6 52 TYR n 6 53 VAL n 6 54 ALA n 6 55 ILE n 6 56 LYS n 6 57 PRO n 6 58 LYS n 6 59 VAL n 6 60 SER n 6 61 ASN n 6 62 PRO n 6 63 GLU n 6 64 ILE n 6 65 TYR n 6 66 VAL n 6 67 GLY n 6 68 GLU n 6 69 VAL n 6 70 LEU n 6 71 TYR n 6 72 VAL n 6 73 ASP n 6 74 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 4 1 sample ? ? ? ? Pyrococcus ? ? ? ? ? ? ? 'Pyrococcus furiosus' 2261 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET ? ? 5 1 sample ? ? ? ? Pyrococcus ? ? ? ? ? ? ? 'Pyrococcus furiosus' 2261 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET ? ? 6 1 sample ? ? ? ? Pyrococcus ? ? ? ? ? ? ? 'Pyrococcus furiosus' 2261 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TRUB_PYRFU Q7LWY0 4 ;EVRRILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPK VSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIE GRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPME KAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVF MPRDWYPKLWEKRD ; 5 ? 2 UNP NOP10_PYRFU Q8U1R4 5 FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 3 ? 3 UNP Q8U029_PYRFU Q8U029 6 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDE 8 ? 4 PDB 2RFK 2RFK 1 GGGCUCCGGAAACCGCGGCGC 1 ? 5 PDB 2RFK 2RFK 2 GCGCUUCGCUCCCGGAGCCCACACUA 1 ? 6 PDB 2RFK 2RFK 3 GGAGCGUGCGGUUU 4 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2RFK A 1 ? 334 ? Q7LWY0 5 ? 338 ? 8 341 2 2 2RFK B 1 ? 53 ? Q8U1R4 3 ? 55 ? 3 55 3 3 2RFK C 1 ? 74 ? Q8U029 8 ? 81 ? 1 74 4 4 2RFK D 1 ? 21 ? 2RFK 1 ? 21 ? 1 21 5 5 2RFK E 1 ? 26 ? 2RFK 1 ? 26 ? 1 26 6 6 2RFK F 1 ? 14 ? 2RFK 4 ? 17 ? 4 17 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2RFK _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 78 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q7LWY0 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 82 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 85 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2RFK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.89 _exptl_crystal.density_percent_sol 68.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '50 mM MES, 100 mM NH4COOCH3, 5 mM MgSO4, 1.0 M NaCl, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 303K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MES ? ? ? 1 2 1 NH4COOCH3 ? ? ? 1 3 1 MgSO4 ? ? ? 1 4 1 NaCl ? ? ? 1 5 2 MES ? ? ? 1 6 2 NH4COOCH3 ? ? ? 1 7 2 MgSO4 ? ? ? 1 8 2 NaCl ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-02-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2RFK _reflns.observed_criterion_sigma_I 5.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 42.52 _reflns.d_resolution_high 2.87 _reflns.number_obs 20534 _reflns.number_all 29512 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.11 _reflns.pdbx_netI_over_sigmaI 41.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 15.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.870 _reflns_shell.d_res_low 2.945 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2RFK _refine.ls_number_reflns_obs 20534 _refine.ls_number_reflns_all 29512 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.52 _refine.ls_d_res_high 2.87 _refine.ls_percent_reflns_obs 79.97 _refine.ls_R_factor_obs 0.25031 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.24783 _refine.ls_R_factor_R_free 0.30042 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 1019 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.929 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 48.255 _refine.aniso_B[1][1] 6.54 _refine.aniso_B[2][2] 6.54 _refine.aniso_B[3][3] -13.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2EY4' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 2.430 _refine.pdbx_overall_ESU_R_Free 0.466 _refine.overall_SU_ML 0.460 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 56.708 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3711 _refine_hist.pdbx_number_atoms_nucleic_acid 1293 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5005 _refine_hist.d_res_high 2.87 _refine_hist.d_res_low 42.52 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 5247 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.725 2.291 ? 7389 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.092 5.000 ? 458 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.831 22.733 ? 161 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.588 15.000 ? 704 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.798 15.000 ? 33 'X-RAY DIFFRACTION' ? r_chiral_restr 0.084 0.200 ? 866 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 3455 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.239 0.200 ? 2525 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.310 0.200 ? 3425 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.181 0.200 ? 171 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.192 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.238 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.385 1.500 ? 2357 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.706 2.000 ? 3745 'X-RAY DIFFRACTION' ? r_scbond_it 0.876 3.000 ? 3690 'X-RAY DIFFRACTION' ? r_scangle_it 1.547 4.500 ? 3642 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.870 _refine_ls_shell.d_res_low 2.945 _refine_ls_shell.number_reflns_R_work 667 _refine_ls_shell.R_factor_R_work 0.405 _refine_ls_shell.percent_reflns_obs 35.78 _refine_ls_shell.R_factor_R_free 0.421 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2RFK _struct.title 'Substrate RNA Positioning in the Archaeal H/ACA Ribonucleoprotein Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RFK _struct_keywords.pdbx_keywords Isomerase/RNA _struct_keywords.text ;PROTEIN-RNA COMPLEX, Archaeal H-ACA Ribonucleoprotein Complex, Isomerase, tRNA processing, Ribosome biogenesis, rRNA processing, Isomerase-RNA COMPLEX, Structural Genomics, Southeast Collaboratory for Structural Genomics, SECSG, PSI-2, Protein Structure Initiative ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO D 35 ? PHE D 42 ? PRO A 42 PHE A 49 1 ? 8 HELX_P HELX_P2 2 THR D 54 ? ASN D 67 ? THR A 61 ASN A 74 1 ? 14 HELX_P HELX_P3 3 LYS D 91 ? LEU D 100 ? LYS A 98 LEU A 107 5 ? 10 HELX_P HELX_P4 4 PRO D 117 ? PHE D 128 ? PRO A 124 PHE A 135 1 ? 12 HELX_P HELX_P5 5 ILE D 176 ? GLY D 188 ? ILE A 183 GLY A 195 1 ? 13 HELX_P HELX_P6 6 LEU D 213 ? GLU D 225 ? LEU A 220 GLU A 232 1 ? 13 HELX_P HELX_P7 7 ILE D 228 ? ALA D 235 ? ILE A 235 ALA A 242 1 ? 8 HELX_P HELX_P8 8 GLU D 240 ? GLU D 244 ? GLU A 247 GLU A 251 5 ? 5 HELX_P HELX_P9 9 LYS D 252 ? HIS D 261 ? LYS A 259 HIS A 268 1 ? 10 HELX_P HELX_P10 10 THR D 301 ? LEU D 306 ? THR A 308 LEU A 313 1 ? 6 HELX_P HELX_P11 11 TYR E 39 ? LEU E 51 ? TYR B 41 LEU B 53 1 ? 13 HELX_P HELX_P12 12 PRO F 62 ? VAL F 66 ? PRO C 62 VAL C 66 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? E CYS 6 SG ? ? ? 1_555 E CYS 21 SG ? ? B CYS 8 B CYS 23 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? E CYS 9 SG ? ? ? 1_555 E CYS 21 SG ? ? B CYS 11 B CYS 23 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc1 metalc ? ? G ZN . ZN ? ? ? 1_555 E CYS 6 SG ? ? B ZN 1 B CYS 8 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc2 metalc ? ? G ZN . ZN ? ? ? 1_555 E CYS 9 SG ? ? B ZN 1 B CYS 11 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc3 metalc ? ? G ZN . ZN ? ? ? 1_555 E CYS 21 SG ? ? B ZN 1 B CYS 23 1_555 ? ? ? ? ? ? ? 2.345 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 20 N3 ? ? D G 1 E C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 20 O2 ? ? D G 1 E C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 20 N4 ? ? D G 1 E C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 19 N3 ? ? D G 2 E C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 19 O2 ? ? D G 2 E C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 19 N4 ? ? D G 2 E C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 18 N3 ? ? D G 3 E C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 18 O2 ? ? D G 3 E C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 18 N4 ? ? D G 3 E C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 17 N1 ? ? D C 4 E G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 17 O6 ? ? D C 4 E G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 17 N2 ? ? D C 4 E G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 N3 ? ? ? 1_555 B A 16 N1 ? ? D U 5 E A 16 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 15 N1 ? ? D C 6 E G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 15 O6 ? ? D C 6 E G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 15 N2 ? ? D C 6 E G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 14 N1 ? ? D C 7 E G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 14 O6 ? ? D C 7 E G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 14 N2 ? ? D C 7 E G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 13 N3 ? ? D G 8 E C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 13 O2 ? ? D G 8 E C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 13 N4 ? ? D G 8 E C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 B C 12 N3 ? ? D G 9 E C 12 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog24 hydrog ? ? A A 10 N1 ? ? ? 1_555 C U 14 N3 ? ? D A 10 F U 17 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog25 hydrog ? ? A A 11 N1 ? ? ? 1_555 C U 13 N3 ? ? D A 11 F U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 11 N6 ? ? ? 1_555 C U 13 O4 ? ? D A 11 F U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 12 N1 ? ? ? 1_555 C U 12 N3 ? ? D A 12 F U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A A 12 N6 ? ? ? 1_555 C U 12 O4 ? ? D A 12 F U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 13 N3 ? ? ? 1_555 C G 11 N1 ? ? D C 13 F G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 13 N4 ? ? ? 1_555 C G 11 O6 ? ? D C 13 F G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 13 O2 ? ? ? 1_555 C G 11 N2 ? ? D C 13 F G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 14 N3 ? ? ? 1_555 C G 10 N2 ? ? D C 14 F G 13 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog33 hydrog ? ? A C 14 O2 ? ? ? 1_555 C G 11 N2 ? ? D C 14 F G 14 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog34 hydrog ? ? A G 15 N1 ? ? ? 1_555 C C 9 N3 ? ? D G 15 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 15 N2 ? ? ? 1_555 C C 9 O2 ? ? D G 15 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 15 O6 ? ? ? 1_555 C C 9 N4 ? ? D G 15 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 16 O2 ? ? ? 1_555 C G 8 N1 ? ? D C 16 F G 11 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog38 hydrog ? ? A C 16 N3 ? ? ? 1_555 C C 9 N4 ? ? D C 16 F C 12 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog39 hydrog ? ? A G 17 N1 ? ? ? 1_555 B U 5 O2 ? ? D G 17 E U 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog40 hydrog ? ? A G 17 O6 ? ? ? 1_555 B U 5 N3 ? ? D G 17 E U 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog41 hydrog ? ? A G 17 N2 ? ? ? 1_555 C U 7 O2 ? ? D G 17 F U 10 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog42 hydrog ? ? A G 18 N1 ? ? ? 1_555 B C 4 N3 ? ? D G 18 E C 4 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog43 hydrog ? ? A C 19 N3 ? ? ? 1_555 B G 3 N1 ? ? D C 19 E G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 19 N4 ? ? ? 1_555 B G 3 O6 ? ? D C 19 E G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 19 O2 ? ? ? 1_555 B G 3 N2 ? ? D C 19 E G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 20 N1 ? ? ? 1_555 B C 2 N3 ? ? D G 20 E C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 20 N2 ? ? ? 1_555 B C 2 O2 ? ? D G 20 E C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 20 O6 ? ? ? 1_555 B C 2 N4 ? ? D G 20 E C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 21 N3 ? ? ? 1_555 B G 1 N1 ? ? D C 21 E G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 21 N4 ? ? ? 1_555 B G 1 O6 ? ? D C 21 E G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 21 O2 ? ? ? 1_555 B G 1 N2 ? ? D C 21 E G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B C 7 N4 ? ? ? 1_555 C G 6 O6 ? ? E C 7 F G 9 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog53 hydrog ? ? B G 8 N1 ? ? ? 1_555 C C 5 N3 ? ? E G 8 F C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B G 8 N2 ? ? ? 1_555 C C 5 O2 ? ? E G 8 F C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B G 8 O6 ? ? ? 1_555 C C 5 N4 ? ? E G 8 F C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B C 9 N3 ? ? ? 1_555 C G 4 N1 ? ? E C 9 F G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B C 9 N4 ? ? ? 1_555 C G 4 O6 ? ? E C 9 F G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B C 9 O2 ? ? ? 1_555 C G 4 N2 ? ? E C 9 F G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B U 10 N3 ? ? ? 1_555 C A 3 N1 ? ? E U 10 F A 6 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog60 hydrog ? ? B C 11 O2 ? ? ? 1_555 C G 2 N2 ? ? E C 11 F G 5 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog61 hydrog ? ? B C 19 O2 ? ? ? 1_555 B A 21 N6 ? ? E C 19 E A 21 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 4 ? C ? 5 ? D ? 11 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel D 7 8 ? anti-parallel D 8 9 ? anti-parallel D 9 10 ? anti-parallel D 10 11 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL D 14 ? ILE D 16 ? VAL A 21 ILE A 23 A 2 ILE D 270 ? HIS D 274 ? ILE A 277 HIS A 281 A 3 LYS D 248 ? ILE D 251 ? LYS A 255 ILE A 258 A 4 LEU D 282 ? THR D 287 ? LEU A 289 THR A 294 A 5 LEU D 292 ? ALA D 298 ? LEU A 299 ALA A 305 A 6 ILE D 312 ? VAL D 319 ? ILE A 319 VAL A 326 A 7 LEU D 265 ? ALA D 266 ? LEU A 272 ALA A 273 B 1 ILE D 211 ? THR D 212 ? ILE A 218 THR A 219 B 2 GLY D 43 ? LYS D 49 ? GLY A 50 LYS A 56 B 3 SER D 82 ? LEU D 89 ? SER A 89 LEU A 96 B 4 ALA D 71 ? HIS D 73 ? ALA A 78 HIS A 80 C 1 ILE D 236 ? PRO D 238 ? ILE A 243 PRO A 245 C 2 GLY D 43 ? LYS D 49 ? GLY A 50 LYS A 56 C 3 SER D 82 ? LEU D 89 ? SER A 89 LEU A 96 C 4 ALA D 191 ? SER D 201 ? ALA A 198 SER A 208 C 5 PHE D 204 ? LYS D 205 ? PHE A 211 LYS A 212 D 1 ALA D 71 ? HIS D 73 ? ALA A 78 HIS A 80 D 2 SER D 82 ? LEU D 89 ? SER A 89 LEU A 96 D 3 ALA D 191 ? SER D 201 ? ALA A 198 SER A 208 D 4 LYS D 104 ? LEU D 112 ? LYS A 111 LEU A 119 D 5 ASP D 163 ? VAL D 170 ? ASP A 170 VAL A 177 D 6 THR D 148 ? GLU D 160 ? THR A 155 GLU A 167 D 7 GLY D 130 ? ILE D 133 ? GLY A 137 ILE A 140 D 8 GLY F 39 ? PRO F 47 ? GLY C 39 PRO C 47 D 9 TYR F 52 ? PRO F 57 ? TYR C 52 PRO C 57 D 10 PHE F 15 ? ARG F 19 ? PHE C 15 ARG C 19 D 11 VAL F 7 ? ALA F 11 ? VAL C 7 ALA C 11 E 1 TYR E 12 ? THR E 13 ? TYR B 14 THR B 15 E 2 ARG E 4 ? LYS E 5 ? ARG B 6 LYS B 7 E 3 LYS E 26 ? VAL E 27 ? LYS B 28 VAL B 29 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU D 15 ? N LEU A 22 O LEU D 273 ? O LEU A 280 A 2 3 O LYS D 272 ? O LYS A 279 N TRP D 250 ? N TRP A 257 A 3 4 N VAL D 249 ? N VAL A 256 O MET D 286 ? O MET A 293 A 4 5 N ILE D 285 ? N ILE A 292 O ALA D 294 ? O ALA A 301 A 5 6 N LEU D 295 ? N LEU A 302 O GLU D 317 ? O GLU A 324 A 6 7 O ALA D 313 ? O ALA A 320 N LEU D 265 ? N LEU A 272 B 1 2 O ILE D 211 ? O ILE A 218 N ASP D 48 ? N ASP A 55 B 2 3 N ILE D 45 ? N ILE A 52 O VAL D 87 ? O VAL A 94 B 3 4 O ALA D 88 ? O ALA A 95 N GLY D 72 ? N GLY A 79 C 1 2 O GLN D 237 ? O GLN A 244 N VAL D 44 ? N VAL A 51 C 2 3 N ILE D 45 ? N ILE A 52 O VAL D 87 ? O VAL A 94 C 3 4 N VAL D 84 ? N VAL A 91 O ARG D 198 ? O ARG A 205 C 4 5 N SER D 201 ? N SER A 208 O PHE D 204 ? O PHE A 211 D 1 2 N GLY D 72 ? N GLY A 79 O ALA D 88 ? O ALA A 95 D 2 3 N VAL D 84 ? N VAL A 91 O ARG D 198 ? O ARG A 205 D 3 4 O GLU D 195 ? O GLU A 202 N LEU D 109 ? N LEU A 116 D 4 5 N MET D 110 ? N MET A 117 O VAL D 164 ? O VAL A 171 D 5 6 O ARG D 167 ? O ARG A 174 N GLU D 155 ? N GLU A 162 D 6 7 O ARG D 149 ? O ARG A 156 N ILE D 132 ? N ILE A 139 D 7 8 N ILE D 133 ? N ILE A 140 O GLY F 46 ? O GLY C 46 D 8 9 N ASP F 43 ? N ASP C 43 O ALA F 54 ? O ALA C 54 D 9 10 O ILE F 55 ? O ILE C 55 N LEU F 16 ? N LEU C 16 D 10 11 O PHE F 15 ? O PHE C 15 N ALA F 11 ? N ALA C 11 E 1 2 O THR E 13 ? O THR B 15 N ARG E 4 ? N ARG B 6 E 2 3 N LYS E 5 ? N LYS B 7 O LYS E 26 ? O LYS B 28 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS E 6 ? CYS B 8 . ? 1_555 ? 2 AC1 4 CYS E 9 ? CYS B 11 . ? 1_555 ? 3 AC1 4 CYS E 18 ? CYS B 20 . ? 1_555 ? 4 AC1 4 CYS E 21 ? CYS B 23 . ? 1_555 ? # _database_PDB_matrix.entry_id 2RFK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2RFK _atom_sites.fract_transf_matrix[1][1] 0.010356 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010356 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004150 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G D . n A 1 2 G 2 2 2 G G D . n A 1 3 G 3 3 3 G G D . n A 1 4 C 4 4 4 C C D . n A 1 5 U 5 5 5 U U D . n A 1 6 C 6 6 6 C C D . n A 1 7 C 7 7 7 C C D . n A 1 8 G 8 8 8 G G D . n A 1 9 G 9 9 9 G G D . n A 1 10 A 10 10 10 A A D . n A 1 11 A 11 11 11 A A D . n A 1 12 A 12 12 12 A A D . n A 1 13 C 13 13 13 C C D . n A 1 14 C 14 14 14 C C D . n A 1 15 G 15 15 15 G G D . n A 1 16 C 16 16 16 C C D . n A 1 17 G 17 17 17 G G D . n A 1 18 G 18 18 18 G G D . n A 1 19 C 19 19 19 C C D . n A 1 20 G 20 20 20 G G D . n A 1 21 C 21 21 21 C C D . n B 2 1 G 1 1 1 G G E . n B 2 2 C 2 2 2 C C E . n B 2 3 G 3 3 3 G G E . n B 2 4 C 4 4 4 C C E . n B 2 5 U 5 5 5 U U E . n B 2 6 U 6 6 6 U U E . n B 2 7 C 7 7 7 C C E . n B 2 8 G 8 8 8 G G E . n B 2 9 C 9 9 9 C C E . n B 2 10 U 10 10 10 U U E . n B 2 11 C 11 11 11 C C E . n B 2 12 C 12 12 12 C C E . n B 2 13 C 13 13 13 C C E . n B 2 14 G 14 14 14 G G E . n B 2 15 G 15 15 15 G G E . n B 2 16 A 16 16 16 A A E . n B 2 17 G 17 17 17 G G E . n B 2 18 C 18 18 18 C C E . n B 2 19 C 19 19 19 C C E . n B 2 20 C 20 20 20 C C E . n B 2 21 A 21 21 21 A A E . n B 2 22 C 22 22 22 C C E . n B 2 23 A 23 23 23 A A E . n B 2 24 C 24 24 24 C C E . n B 2 25 U 25 25 25 U U E . n B 2 26 A 26 26 26 A A E . n C 3 1 G 1 4 4 G G F . n C 3 2 G 2 5 5 G G F . n C 3 3 A 3 6 6 A A F . n C 3 4 G 4 7 7 G G F . n C 3 5 C 5 8 8 C C F . n C 3 6 G 6 9 9 G G F . n C 3 7 U 7 10 10 U U F . n C 3 8 G 8 11 11 G G F . n C 3 9 C 9 12 12 C C F . n C 3 10 G 10 13 13 G G F . n C 3 11 G 11 14 14 G G F . n C 3 12 U 12 15 15 U U F . n C 3 13 U 13 16 16 U U F . n C 3 14 U 14 17 17 U U F . n D 4 1 GLU 1 8 8 GLU GLU A . n D 4 2 VAL 2 9 9 VAL VAL A . n D 4 3 ARG 3 10 10 ARG ARG A . n D 4 4 ARG 4 11 11 ARG ARG A . n D 4 5 ILE 5 12 12 ILE ILE A . n D 4 6 LEU 6 13 13 LEU LEU A . n D 4 7 PRO 7 14 14 PRO PRO A . n D 4 8 ALA 8 15 15 ALA ALA A . n D 4 9 ASP 9 16 16 ASP ASP A . n D 4 10 ILE 10 17 17 ILE ILE A . n D 4 11 LYS 11 18 18 LYS LYS A . n D 4 12 ARG 12 19 19 ARG ARG A . n D 4 13 GLU 13 20 20 GLU GLU A . n D 4 14 VAL 14 21 21 VAL VAL A . n D 4 15 LEU 15 22 22 LEU LEU A . n D 4 16 ILE 16 23 23 ILE ILE A . n D 4 17 LYS 17 24 24 LYS LYS A . n D 4 18 ASP 18 25 25 ASP ASP A . n D 4 19 GLU 19 26 26 GLU GLU A . n D 4 20 ASN 20 27 27 ASN ASN A . n D 4 21 ALA 21 28 28 ALA ALA A . n D 4 22 GLU 22 29 29 GLU GLU A . n D 4 23 THR 23 30 30 THR THR A . n D 4 24 ASN 24 31 31 ASN ASN A . n D 4 25 PRO 25 32 32 PRO PRO A . n D 4 26 ASP 26 33 33 ASP ASP A . n D 4 27 TRP 27 34 34 TRP TRP A . n D 4 28 GLY 28 35 35 GLY GLY A . n D 4 29 PHE 29 36 36 PHE PHE A . n D 4 30 PRO 30 37 37 PRO PRO A . n D 4 31 PRO 31 38 38 PRO PRO A . n D 4 32 GLU 32 39 39 GLU GLU A . n D 4 33 LYS 33 40 40 LYS LYS A . n D 4 34 ARG 34 41 41 ARG ARG A . n D 4 35 PRO 35 42 42 PRO PRO A . n D 4 36 ILE 36 43 43 ILE ILE A . n D 4 37 GLU 37 44 44 GLU GLU A . n D 4 38 MET 38 45 45 MET MET A . n D 4 39 HIS 39 46 46 HIS HIS A . n D 4 40 ILE 40 47 47 ILE ILE A . n D 4 41 GLN 41 48 48 GLN GLN A . n D 4 42 PHE 42 49 49 PHE PHE A . n D 4 43 GLY 43 50 50 GLY GLY A . n D 4 44 VAL 44 51 51 VAL VAL A . n D 4 45 ILE 45 52 52 ILE ILE A . n D 4 46 ASN 46 53 53 ASN ASN A . n D 4 47 LEU 47 54 54 LEU LEU A . n D 4 48 ASP 48 55 55 ASP ASP A . n D 4 49 LYS 49 56 56 LYS LYS A . n D 4 50 PRO 50 57 57 PRO PRO A . n D 4 51 PRO 51 58 58 PRO PRO A . n D 4 52 GLY 52 59 59 GLY GLY A . n D 4 53 PRO 53 60 60 PRO PRO A . n D 4 54 THR 54 61 61 THR THR A . n D 4 55 SER 55 62 62 SER SER A . n D 4 56 HIS 56 63 63 HIS HIS A . n D 4 57 GLU 57 64 64 GLU GLU A . n D 4 58 VAL 58 65 65 VAL VAL A . n D 4 59 VAL 59 66 66 VAL VAL A . n D 4 60 ALA 60 67 67 ALA ALA A . n D 4 61 TRP 61 68 68 TRP TRP A . n D 4 62 ILE 62 69 69 ILE ILE A . n D 4 63 LYS 63 70 70 LYS LYS A . n D 4 64 LYS 64 71 71 LYS LYS A . n D 4 65 ILE 65 72 72 ILE ILE A . n D 4 66 LEU 66 73 73 LEU LEU A . n D 4 67 ASN 67 74 74 ASN ASN A . n D 4 68 LEU 68 75 75 LEU LEU A . n D 4 69 GLU 69 76 76 GLU GLU A . n D 4 70 LYS 70 77 77 LYS LYS A . n D 4 71 ALA 71 78 78 ALA ALA A . n D 4 72 GLY 72 79 79 GLY GLY A . n D 4 73 HIS 73 80 80 HIS HIS A . n D 4 74 GLY 74 81 81 GLY GLY A . n D 4 75 GLY 75 82 82 GLY GLY A . n D 4 76 THR 76 83 83 THR THR A . n D 4 77 LEU 77 84 84 LEU LEU A . n D 4 78 ALA 78 85 85 ALA ALA A . n D 4 79 PRO 79 86 86 PRO PRO A . n D 4 80 LYS 80 87 87 LYS LYS A . n D 4 81 VAL 81 88 88 VAL VAL A . n D 4 82 SER 82 89 89 SER SER A . n D 4 83 GLY 83 90 90 GLY GLY A . n D 4 84 VAL 84 91 91 VAL VAL A . n D 4 85 LEU 85 92 92 LEU LEU A . n D 4 86 PRO 86 93 93 PRO PRO A . n D 4 87 VAL 87 94 94 VAL VAL A . n D 4 88 ALA 88 95 95 ALA ALA A . n D 4 89 LEU 89 96 96 LEU LEU A . n D 4 90 GLU 90 97 97 GLU GLU A . n D 4 91 LYS 91 98 98 LYS LYS A . n D 4 92 ALA 92 99 99 ALA ALA A . n D 4 93 THR 93 100 100 THR THR A . n D 4 94 ARG 94 101 101 ARG ARG A . n D 4 95 VAL 95 102 102 VAL VAL A . n D 4 96 VAL 96 103 103 VAL VAL A . n D 4 97 GLN 97 104 104 GLN GLN A . n D 4 98 ALA 98 105 105 ALA ALA A . n D 4 99 LEU 99 106 106 LEU LEU A . n D 4 100 LEU 100 107 107 LEU LEU A . n D 4 101 PRO 101 108 108 PRO PRO A . n D 4 102 ALA 102 109 109 ALA ALA A . n D 4 103 GLY 103 110 110 GLY GLY A . n D 4 104 LYS 104 111 111 LYS LYS A . n D 4 105 GLU 105 112 112 GLU GLU A . n D 4 106 TYR 106 113 113 TYR TYR A . n D 4 107 VAL 107 114 114 VAL VAL A . n D 4 108 ALA 108 115 115 ALA ALA A . n D 4 109 LEU 109 116 116 LEU LEU A . n D 4 110 MET 110 117 117 MET MET A . n D 4 111 HIS 111 118 118 HIS HIS A . n D 4 112 LEU 112 119 119 LEU LEU A . n D 4 113 HIS 113 120 120 HIS HIS A . n D 4 114 GLY 114 121 121 GLY GLY A . n D 4 115 ASP 115 122 122 ASP ASP A . n D 4 116 VAL 116 123 123 VAL VAL A . n D 4 117 PRO 117 124 124 PRO PRO A . n D 4 118 GLU 118 125 125 GLU GLU A . n D 4 119 ASP 119 126 126 ASP ASP A . n D 4 120 LYS 120 127 127 LYS LYS A . n D 4 121 ILE 121 128 128 ILE ILE A . n D 4 122 ILE 122 129 129 ILE ILE A . n D 4 123 GLN 123 130 130 GLN GLN A . n D 4 124 VAL 124 131 131 VAL VAL A . n D 4 125 MET 125 132 132 MET MET A . n D 4 126 LYS 126 133 133 LYS LYS A . n D 4 127 GLU 127 134 134 GLU GLU A . n D 4 128 PHE 128 135 135 PHE PHE A . n D 4 129 GLU 129 136 136 GLU GLU A . n D 4 130 GLY 130 137 137 GLY GLY A . n D 4 131 GLU 131 138 138 GLU GLU A . n D 4 132 ILE 132 139 139 ILE ILE A . n D 4 133 ILE 133 140 140 ILE ILE A . n D 4 134 GLN 134 141 141 GLN GLN A . n D 4 135 ARG 135 142 142 ARG ARG A . n D 4 136 PRO 136 143 143 PRO PRO A . n D 4 137 PRO 137 144 144 PRO PRO A . n D 4 138 LEU 138 145 145 LEU LEU A . n D 4 139 ARG 139 146 146 ARG ARG A . n D 4 140 SER 140 147 147 SER SER A . n D 4 141 ALA 141 148 148 ALA ALA A . n D 4 142 VAL 142 149 149 VAL VAL A . n D 4 143 LYS 143 150 150 LYS LYS A . n D 4 144 ARG 144 151 151 ARG ARG A . n D 4 145 ARG 145 152 152 ARG ARG A . n D 4 146 LEU 146 153 153 LEU LEU A . n D 4 147 ARG 147 154 154 ARG ARG A . n D 4 148 THR 148 155 155 THR THR A . n D 4 149 ARG 149 156 156 ARG ARG A . n D 4 150 LYS 150 157 157 LYS LYS A . n D 4 151 VAL 151 158 158 VAL VAL A . n D 4 152 TYR 152 159 159 TYR TYR A . n D 4 153 TYR 153 160 160 TYR TYR A . n D 4 154 ILE 154 161 161 ILE ILE A . n D 4 155 GLU 155 162 162 GLU GLU A . n D 4 156 VAL 156 163 163 VAL VAL A . n D 4 157 LEU 157 164 164 LEU LEU A . n D 4 158 GLU 158 165 165 GLU GLU A . n D 4 159 ILE 159 166 166 ILE ILE A . n D 4 160 GLU 160 167 167 GLU GLU A . n D 4 161 GLY 161 168 168 GLY GLY A . n D 4 162 ARG 162 169 169 ARG ARG A . n D 4 163 ASP 163 170 170 ASP ASP A . n D 4 164 VAL 164 171 171 VAL VAL A . n D 4 165 LEU 165 172 172 LEU LEU A . n D 4 166 PHE 166 173 173 PHE PHE A . n D 4 167 ARG 167 174 174 ARG ARG A . n D 4 168 VAL 168 175 175 VAL VAL A . n D 4 169 GLY 169 176 176 GLY GLY A . n D 4 170 VAL 170 177 177 VAL VAL A . n D 4 171 GLU 171 178 178 GLU GLU A . n D 4 172 ALA 172 179 179 ALA ALA A . n D 4 173 GLY 173 180 180 GLY GLY A . n D 4 174 THR 174 181 181 THR THR A . n D 4 175 TYR 175 182 182 TYR TYR A . n D 4 176 ILE 176 183 183 ILE ILE A . n D 4 177 ARG 177 184 184 ARG ARG A . n D 4 178 SER 178 185 185 SER SER A . n D 4 179 LEU 179 186 186 LEU LEU A . n D 4 180 ILE 180 187 187 ILE ILE A . n D 4 181 HIS 181 188 188 HIS HIS A . n D 4 182 HIS 182 189 189 HIS HIS A . n D 4 183 ILE 183 190 190 ILE ILE A . n D 4 184 GLY 184 191 191 GLY GLY A . n D 4 185 LEU 185 192 192 LEU LEU A . n D 4 186 ALA 186 193 193 ALA ALA A . n D 4 187 LEU 187 194 194 LEU LEU A . n D 4 188 GLY 188 195 195 GLY GLY A . n D 4 189 VAL 189 196 196 VAL VAL A . n D 4 190 GLY 190 197 197 GLY GLY A . n D 4 191 ALA 191 198 198 ALA ALA A . n D 4 192 HIS 192 199 199 HIS HIS A . n D 4 193 MET 193 200 200 MET MET A . n D 4 194 SER 194 201 201 SER SER A . n D 4 195 GLU 195 202 202 GLU GLU A . n D 4 196 LEU 196 203 203 LEU LEU A . n D 4 197 ARG 197 204 204 ARG ARG A . n D 4 198 ARG 198 205 205 ARG ARG A . n D 4 199 THR 199 206 206 THR THR A . n D 4 200 ARG 200 207 207 ARG ARG A . n D 4 201 SER 201 208 208 SER SER A . n D 4 202 GLY 202 209 209 GLY GLY A . n D 4 203 PRO 203 210 210 PRO PRO A . n D 4 204 PHE 204 211 211 PHE PHE A . n D 4 205 LYS 205 212 212 LYS LYS A . n D 4 206 GLU 206 213 213 GLU GLU A . n D 4 207 ASP 207 214 214 ASP ASP A . n D 4 208 GLU 208 215 215 GLU GLU A . n D 4 209 THR 209 216 216 THR THR A . n D 4 210 LEU 210 217 217 LEU LEU A . n D 4 211 ILE 211 218 218 ILE ILE A . n D 4 212 THR 212 219 219 THR THR A . n D 4 213 LEU 213 220 220 LEU LEU A . n D 4 214 HIS 214 221 221 HIS HIS A . n D 4 215 ASP 215 222 222 ASP ASP A . n D 4 216 LEU 216 223 223 LEU LEU A . n D 4 217 VAL 217 224 224 VAL VAL A . n D 4 218 ASP 218 225 225 ASP ASP A . n D 4 219 TYR 219 226 226 TYR TYR A . n D 4 220 TYR 220 227 227 TYR TYR A . n D 4 221 TYR 221 228 228 TYR TYR A . n D 4 222 PHE 222 229 229 PHE PHE A . n D 4 223 TRP 223 230 230 TRP TRP A . n D 4 224 LYS 224 231 231 LYS LYS A . n D 4 225 GLU 225 232 232 GLU GLU A . n D 4 226 ASP 226 233 233 ASP ASP A . n D 4 227 GLY 227 234 234 GLY GLY A . n D 4 228 ILE 228 235 235 ILE ILE A . n D 4 229 GLU 229 236 236 GLU GLU A . n D 4 230 GLU 230 237 237 GLU GLU A . n D 4 231 TYR 231 238 238 TYR TYR A . n D 4 232 PHE 232 239 239 PHE PHE A . n D 4 233 ARG 233 240 240 ARG ARG A . n D 4 234 LYS 234 241 241 LYS LYS A . n D 4 235 ALA 235 242 242 ALA ALA A . n D 4 236 ILE 236 243 243 ILE ILE A . n D 4 237 GLN 237 244 244 GLN GLN A . n D 4 238 PRO 238 245 245 PRO PRO A . n D 4 239 MET 239 246 246 MET MET A . n D 4 240 GLU 240 247 247 GLU GLU A . n D 4 241 LYS 241 248 248 LYS LYS A . n D 4 242 ALA 242 249 249 ALA ALA A . n D 4 243 VAL 243 250 250 VAL VAL A . n D 4 244 GLU 244 251 251 GLU GLU A . n D 4 245 HIS 245 252 252 HIS HIS A . n D 4 246 LEU 246 253 253 LEU LEU A . n D 4 247 PRO 247 254 254 PRO PRO A . n D 4 248 LYS 248 255 255 LYS LYS A . n D 4 249 VAL 249 256 256 VAL VAL A . n D 4 250 TRP 250 257 257 TRP TRP A . n D 4 251 ILE 251 258 258 ILE ILE A . n D 4 252 LYS 252 259 259 LYS LYS A . n D 4 253 ASP 253 260 260 ASP ASP A . n D 4 254 SER 254 261 261 SER SER A . n D 4 255 ALA 255 262 262 ALA ALA A . n D 4 256 VAL 256 263 263 VAL VAL A . n D 4 257 ALA 257 264 264 ALA ALA A . n D 4 258 ALA 258 265 265 ALA ALA A . n D 4 259 VAL 259 266 266 VAL VAL A . n D 4 260 THR 260 267 267 THR THR A . n D 4 261 HIS 261 268 268 HIS HIS A . n D 4 262 GLY 262 269 269 GLY GLY A . n D 4 263 ALA 263 270 270 ALA ALA A . n D 4 264 ASP 264 271 271 ASP ASP A . n D 4 265 LEU 265 272 272 LEU LEU A . n D 4 266 ALA 266 273 273 ALA ALA A . n D 4 267 VAL 267 274 274 VAL VAL A . n D 4 268 PRO 268 275 275 PRO PRO A . n D 4 269 GLY 269 276 276 GLY GLY A . n D 4 270 ILE 270 277 277 ILE ILE A . n D 4 271 ALA 271 278 278 ALA ALA A . n D 4 272 LYS 272 279 279 LYS LYS A . n D 4 273 LEU 273 280 280 LEU LEU A . n D 4 274 HIS 274 281 281 HIS HIS A . n D 4 275 ALA 275 282 282 ALA ALA A . n D 4 276 GLY 276 283 283 GLY GLY A . n D 4 277 ILE 277 284 284 ILE ILE A . n D 4 278 LYS 278 285 285 LYS LYS A . n D 4 279 ARG 279 286 286 ARG ARG A . n D 4 280 GLY 280 287 287 GLY GLY A . n D 4 281 ASP 281 288 288 ASP ASP A . n D 4 282 LEU 282 289 289 LEU LEU A . n D 4 283 VAL 283 290 290 VAL VAL A . n D 4 284 ALA 284 291 291 ALA ALA A . n D 4 285 ILE 285 292 292 ILE ILE A . n D 4 286 MET 286 293 293 MET MET A . n D 4 287 THR 287 294 294 THR THR A . n D 4 288 LEU 288 295 295 LEU LEU A . n D 4 289 LYS 289 296 296 LYS LYS A . n D 4 290 ASP 290 297 297 ASP ASP A . n D 4 291 GLU 291 298 298 GLU GLU A . n D 4 292 LEU 292 299 299 LEU LEU A . n D 4 293 VAL 293 300 300 VAL VAL A . n D 4 294 ALA 294 301 301 ALA ALA A . n D 4 295 LEU 295 302 302 LEU LEU A . n D 4 296 GLY 296 303 303 GLY GLY A . n D 4 297 LYS 297 304 304 LYS LYS A . n D 4 298 ALA 298 305 305 ALA ALA A . n D 4 299 MET 299 306 306 MET MET A . n D 4 300 MET 300 307 307 MET MET A . n D 4 301 THR 301 308 308 THR THR A . n D 4 302 SER 302 309 309 SER SER A . n D 4 303 GLN 303 310 310 GLN GLN A . n D 4 304 GLU 304 311 311 GLU GLU A . n D 4 305 MET 305 312 312 MET MET A . n D 4 306 LEU 306 313 313 LEU LEU A . n D 4 307 GLU 307 314 314 GLU GLU A . n D 4 308 LYS 308 315 315 LYS LYS A . n D 4 309 THR 309 316 316 THR THR A . n D 4 310 LYS 310 317 317 LYS LYS A . n D 4 311 GLY 311 318 318 GLY GLY A . n D 4 312 ILE 312 319 319 ILE ILE A . n D 4 313 ALA 313 320 320 ALA ALA A . n D 4 314 VAL 314 321 321 VAL VAL A . n D 4 315 ASP 315 322 322 ASP ASP A . n D 4 316 VAL 316 323 323 VAL VAL A . n D 4 317 GLU 317 324 324 GLU GLU A . n D 4 318 LYS 318 325 325 LYS LYS A . n D 4 319 VAL 319 326 326 VAL VAL A . n D 4 320 PHE 320 327 327 PHE PHE A . n D 4 321 MET 321 328 328 MET MET A . n D 4 322 PRO 322 329 329 PRO PRO A . n D 4 323 ARG 323 330 330 ARG ARG A . n D 4 324 ASP 324 331 331 ASP ASP A . n D 4 325 TRP 325 332 332 TRP TRP A . n D 4 326 TYR 326 333 333 TYR TYR A . n D 4 327 PRO 327 334 334 PRO PRO A . n D 4 328 LYS 328 335 335 LYS LYS A . n D 4 329 LEU 329 336 336 LEU LEU A . n D 4 330 TRP 330 337 337 TRP TRP A . n D 4 331 GLU 331 338 338 GLU GLU A . n D 4 332 LYS 332 339 339 LYS LYS A . n D 4 333 ARG 333 340 340 ARG ARG A . n D 4 334 ASP 334 341 341 ASP ASP A . n E 5 1 PHE 1 3 3 PHE PHE B . n E 5 2 ARG 2 4 4 ARG ARG B . n E 5 3 ILE 3 5 5 ILE ILE B . n E 5 4 ARG 4 6 6 ARG ARG B . n E 5 5 LYS 5 7 7 LYS LYS B . n E 5 6 CYS 6 8 8 CYS CYS B . n E 5 7 PRO 7 9 9 PRO PRO B . n E 5 8 LYS 8 10 10 LYS LYS B . n E 5 9 CYS 9 11 11 CYS CYS B . n E 5 10 GLY 10 12 12 GLY GLY B . n E 5 11 ARG 11 13 13 ARG ARG B . n E 5 12 TYR 12 14 14 TYR TYR B . n E 5 13 THR 13 15 15 THR THR B . n E 5 14 LEU 14 16 16 LEU LEU B . n E 5 15 LYS 15 17 17 LYS LYS B . n E 5 16 GLU 16 18 18 GLU GLU B . n E 5 17 VAL 17 19 19 VAL VAL B . n E 5 18 CYS 18 20 20 CYS CYS B . n E 5 19 PRO 19 21 21 PRO PRO B . n E 5 20 VAL 20 22 22 VAL VAL B . n E 5 21 CYS 21 23 23 CYS CYS B . n E 5 22 GLY 22 24 24 GLY GLY B . n E 5 23 GLU 23 25 25 GLU GLU B . n E 5 24 LYS 24 26 26 LYS LYS B . n E 5 25 THR 25 27 27 THR THR B . n E 5 26 LYS 26 28 28 LYS LYS B . n E 5 27 VAL 27 29 29 VAL VAL B . n E 5 28 ALA 28 30 30 ALA ALA B . n E 5 29 HIS 29 31 31 HIS HIS B . n E 5 30 PRO 30 32 32 PRO PRO B . n E 5 31 PRO 31 33 33 PRO PRO B . n E 5 32 ARG 32 34 34 ARG ARG B . n E 5 33 PHE 33 35 35 PHE PHE B . n E 5 34 SER 34 36 36 SER SER B . n E 5 35 PRO 35 37 37 PRO PRO B . n E 5 36 GLU 36 38 38 GLU GLU B . n E 5 37 ASP 37 39 39 ASP ASP B . n E 5 38 PRO 38 40 40 PRO PRO B . n E 5 39 TYR 39 41 41 TYR TYR B . n E 5 40 GLY 40 42 42 GLY GLY B . n E 5 41 GLU 41 43 43 GLU GLU B . n E 5 42 TYR 42 44 44 TYR TYR B . n E 5 43 ARG 43 45 45 ARG ARG B . n E 5 44 ARG 44 46 46 ARG ARG B . n E 5 45 ARG 45 47 47 ARG ARG B . n E 5 46 TRP 46 48 48 TRP TRP B . n E 5 47 LYS 47 49 49 LYS LYS B . n E 5 48 ARG 48 50 50 ARG ARG B . n E 5 49 GLU 49 51 51 GLU GLU B . n E 5 50 VAL 50 52 52 VAL VAL B . n E 5 51 LEU 51 53 53 LEU LEU B . n E 5 52 GLY 52 54 54 GLY GLY B . n E 5 53 ILE 53 55 55 ILE ILE B . n F 6 1 MET 1 1 1 MET MET C . n F 6 2 LYS 2 2 2 LYS LYS C . n F 6 3 ARG 3 3 3 ARG ARG C . n F 6 4 LEU 4 4 4 LEU LEU C . n F 6 5 GLY 5 5 5 GLY GLY C . n F 6 6 LYS 6 6 6 LYS LYS C . n F 6 7 VAL 7 7 7 VAL VAL C . n F 6 8 LEU 8 8 8 LEU LEU C . n F 6 9 HIS 9 9 9 HIS HIS C . n F 6 10 TYR 10 10 10 TYR TYR C . n F 6 11 ALA 11 11 11 ALA ALA C . n F 6 12 LYS 12 12 12 LYS LYS C . n F 6 13 GLN 13 13 13 GLN GLN C . n F 6 14 GLY 14 14 14 GLY GLY C . n F 6 15 PHE 15 15 15 PHE PHE C . n F 6 16 LEU 16 16 16 LEU LEU C . n F 6 17 ILE 17 17 17 ILE ILE C . n F 6 18 VAL 18 18 18 VAL VAL C . n F 6 19 ARG 19 19 19 ARG ARG C . n F 6 20 THR 20 20 20 THR THR C . n F 6 21 ASN 21 21 21 ASN ASN C . n F 6 22 TRP 22 22 22 TRP TRP C . n F 6 23 VAL 23 23 23 VAL VAL C . n F 6 24 PRO 24 24 24 PRO PRO C . n F 6 25 SER 25 25 25 SER SER C . n F 6 26 LEU 26 26 26 LEU LEU C . n F 6 27 ASN 27 27 27 ASN ASN C . n F 6 28 ASP 28 28 28 ASP ASP C . n F 6 29 ARG 29 29 29 ARG ARG C . n F 6 30 VAL 30 30 30 VAL VAL C . n F 6 31 VAL 31 31 31 VAL VAL C . n F 6 32 ASP 32 32 32 ASP ASP C . n F 6 33 LYS 33 33 33 LYS LYS C . n F 6 34 ARG 34 34 34 ARG ARG C . n F 6 35 LEU 35 35 35 LEU LEU C . n F 6 36 GLN 36 36 36 GLN GLN C . n F 6 37 PHE 37 37 37 PHE PHE C . n F 6 38 VAL 38 38 38 VAL VAL C . n F 6 39 GLY 39 39 39 GLY GLY C . n F 6 40 ILE 40 40 40 ILE ILE C . n F 6 41 VAL 41 41 41 VAL VAL C . n F 6 42 LYS 42 42 42 LYS LYS C . n F 6 43 ASP 43 43 43 ASP ASP C . n F 6 44 VAL 44 44 44 VAL VAL C . n F 6 45 PHE 45 45 45 PHE PHE C . n F 6 46 GLY 46 46 46 GLY GLY C . n F 6 47 PRO 47 47 47 PRO PRO C . n F 6 48 VAL 48 48 48 VAL VAL C . n F 6 49 LYS 49 49 49 LYS LYS C . n F 6 50 MET 50 50 50 MET MET C . n F 6 51 PRO 51 51 51 PRO PRO C . n F 6 52 TYR 52 52 52 TYR TYR C . n F 6 53 VAL 53 53 53 VAL VAL C . n F 6 54 ALA 54 54 54 ALA ALA C . n F 6 55 ILE 55 55 55 ILE ILE C . n F 6 56 LYS 56 56 56 LYS LYS C . n F 6 57 PRO 57 57 57 PRO PRO C . n F 6 58 LYS 58 58 58 LYS LYS C . n F 6 59 VAL 59 59 59 VAL VAL C . n F 6 60 SER 60 60 60 SER SER C . n F 6 61 ASN 61 61 61 ASN ASN C . n F 6 62 PRO 62 62 62 PRO PRO C . n F 6 63 GLU 63 63 63 GLU GLU C . n F 6 64 ILE 64 64 64 ILE ILE C . n F 6 65 TYR 65 65 65 TYR TYR C . n F 6 66 VAL 66 66 66 VAL VAL C . n F 6 67 GLY 67 67 67 GLY GLY C . n F 6 68 GLU 68 68 68 GLU GLU C . n F 6 69 VAL 69 69 69 VAL VAL C . n F 6 70 LEU 70 70 70 LEU LEU C . n F 6 71 TYR 71 71 71 TYR TYR C . n F 6 72 VAL 72 72 72 VAL VAL C . n F 6 73 ASP 73 73 73 ASP ASP C . n F 6 74 GLU 74 74 74 GLU GLU C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Southeast Collaboratory for Structural Genomics' _pdbx_SG_project.initial_of_center SECSG # _pdbx_nonpoly_scheme.asym_id G _pdbx_nonpoly_scheme.entity_id 7 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 11200 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? E CYS 6 ? B CYS 8 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 SG ? E CYS 9 ? B CYS 11 ? 1_555 53.8 ? 2 SG ? E CYS 6 ? B CYS 8 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 SG ? E CYS 21 ? B CYS 23 ? 1_555 51.2 ? 3 SG ? E CYS 9 ? B CYS 11 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 SG ? E CYS 21 ? B CYS 23 ? 1_555 53.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 3 'Structure model' struct_site 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 3 'Structure model' '_struct_ref_seq_dif.details' 16 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 SG B CYS 8 ? ? SG B CYS 20 ? ? 2.03 2 1 O A ARG 41 ? ? NH2 A ARG 240 ? ? 2.09 3 1 SG B CYS 8 ? ? SG B CYS 11 ? ? 2.09 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD C GLU 74 ? ? OE1 C GLU 74 ? ? 1.490 1.252 0.238 0.011 N 2 1 CD C GLU 74 ? ? OE2 C GLU 74 ? ? 1.483 1.252 0.231 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" D U 5 ? ? "C2'" D U 5 ? ? "C1'" D U 5 ? ? 95.32 101.30 -5.98 0.70 N 2 1 "C3'" E C 12 ? ? "C2'" E C 12 ? ? "C1'" E C 12 ? ? 96.63 101.30 -4.67 0.70 N 3 1 "C3'" F G 4 ? ? "O3'" F G 4 ? ? P F G 5 ? ? 127.76 119.70 8.06 1.20 Y 4 1 CA B CYS 8 ? ? CB B CYS 8 ? ? SG B CYS 8 ? ? 122.76 114.20 8.56 1.10 N 5 1 CA B CYS 23 ? ? CB B CYS 23 ? ? SG B CYS 23 ? ? 125.29 114.20 11.09 1.10 N 6 1 OE1 C GLU 74 ? ? CD C GLU 74 ? ? OE2 C GLU 74 ? ? 133.32 123.30 10.02 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 17 ? ? -38.28 119.07 2 1 PRO A 38 ? ? -31.68 -91.08 3 1 GLU A 39 ? ? -61.54 27.23 4 1 LYS A 40 ? ? -150.45 52.85 5 1 GLU A 97 ? ? 48.20 -114.66 6 1 VAL A 103 ? ? -16.10 -52.01 7 1 GLN A 104 ? ? -27.48 -67.88 8 1 ALA A 105 ? ? -30.99 -37.09 9 1 HIS A 120 ? ? -104.96 53.75 10 1 ILE A 129 ? ? -64.16 5.12 11 1 PRO A 144 ? ? -94.80 -122.88 12 1 LEU A 145 ? ? -4.11 94.97 13 1 ARG A 146 ? ? -111.80 -125.38 14 1 ALA A 148 ? ? -64.33 89.30 15 1 ARG A 151 ? ? -92.05 -156.24 16 1 ARG A 152 ? ? 36.05 -176.47 17 1 ALA A 179 ? ? -10.13 -85.81 18 1 GLU A 215 ? ? -52.55 -5.25 19 1 ALA A 249 ? ? -64.26 3.82 20 1 VAL A 300 ? ? -120.87 -53.10 21 1 GLN A 310 ? ? -39.33 -27.32 22 1 PHE A 327 ? ? -90.75 -61.52 23 1 LYS A 339 ? ? -78.64 -155.03 24 1 GLU B 25 ? ? -76.07 -163.65 25 1 ASP B 39 ? ? 37.25 62.53 26 1 HIS C 9 ? ? -176.59 -173.92 27 1 PRO C 24 ? ? -83.39 -128.12 28 1 LYS C 33 ? ? -50.39 -2.55 29 1 VAL C 38 ? ? -100.60 -61.16 30 1 PRO C 47 ? ? -37.92 118.20 31 1 PRO C 51 ? ? -77.42 -166.80 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 ZN ZN ZN N N 532 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2RFK 'double helix' 2RFK 'a-form double helix' 2RFK 'mismatched base pair' 2RFK 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 20 1_555 -0.694 -0.049 0.020 -11.076 -14.763 1.710 1 D_G1:C20_E D 1 ? E 20 ? 19 1 1 A G 2 1_555 B C 19 1_555 -0.401 0.081 -0.268 -11.582 -21.911 0.613 2 D_G2:C19_E D 2 ? E 19 ? 19 1 1 A G 3 1_555 B C 18 1_555 -0.290 0.260 0.781 5.773 -8.529 0.289 3 D_G3:C18_E D 3 ? E 18 ? 19 1 1 A C 4 1_555 B G 17 1_555 0.513 0.015 0.578 6.275 -27.764 -1.444 4 D_C4:G17_E D 4 ? E 17 ? 19 1 1 A U 5 1_555 B A 16 1_555 -1.204 0.014 0.972 1.105 -21.649 1.360 5 D_U5:A16_E D 5 ? E 16 ? ? ? 1 A C 6 1_555 B G 15 1_555 0.417 -0.229 0.503 8.581 -20.115 -0.773 6 D_C6:G15_E D 6 ? E 15 ? 19 1 1 A C 7 1_555 B G 14 1_555 -0.739 -0.040 0.072 10.779 -28.408 2.196 7 D_C7:G14_E D 7 ? E 14 ? 19 1 1 A G 8 1_555 B C 13 1_555 -0.819 -0.508 0.250 2.223 -18.836 -11.427 8 D_G8:C13_E D 8 ? E 13 ? 19 1 1 A G 9 1_555 B C 12 1_555 -0.372 -0.230 0.196 5.135 -16.485 -17.235 9 D_G9:C12_E D 9 ? E 12 ? ? ? 1 C G 2 1_555 B C 11 1_555 1.001 0.434 0.302 -13.285 -11.096 13.755 10 F_G5:C11_E F 5 ? E 11 ? ? 1 1 C A 3 1_555 B U 10 1_555 0.772 0.408 0.336 -6.876 -0.995 5.964 11 F_A6:U10_E F 6 ? E 10 ? ? ? 1 C G 4 1_555 B C 9 1_555 -0.100 0.134 0.079 -4.388 -11.827 1.209 12 F_G7:C9_E F 7 ? E 9 ? 19 1 1 C C 5 1_555 B G 8 1_555 0.313 0.088 -0.099 15.932 -13.709 5.796 13 F_C8:G8_E F 8 ? E 8 ? 19 1 1 C G 6 1_555 B C 7 1_555 -2.100 5.855 1.186 -31.253 12.480 -145.147 14 F_G9:C7_E F 9 ? E 7 ? ? ? 1 A A 10 1_555 C U 14 1_555 -1.926 0.062 -2.050 -59.422 -21.098 21.000 15 D_A10:U17_F D 10 ? F 17 ? ? 1 1 A A 11 1_555 C U 13 1_555 0.077 -0.033 0.115 4.163 -12.123 15.380 16 D_A11:U16_F D 11 ? F 16 ? 20 1 1 A A 12 1_555 C U 12 1_555 -0.901 -0.262 0.119 3.443 -12.294 0.739 17 D_A12:U15_F D 12 ? F 15 ? 20 1 1 A C 13 1_555 C G 11 1_555 0.204 0.254 -0.356 18.422 -5.927 7.336 18 D_C13:G14_F D 13 ? F 14 ? 19 1 1 A C 14 1_555 C G 10 1_555 -1.876 0.499 -1.297 35.639 -6.735 1.010 19 D_C14:G13_F D 14 ? F 13 ? ? ? 1 A G 15 1_555 C C 9 1_555 1.488 -0.006 -1.042 -9.703 -0.686 5.867 20 D_G15:C12_F D 15 ? F 12 ? 19 1 1 A C 16 1_555 C G 8 1_555 1.504 -0.220 -1.393 10.413 -1.519 -0.108 21 D_C16:G11_F D 16 ? F 11 ? ? 1 1 A G 17 1_555 B U 5 1_555 -2.124 -0.236 -0.327 -0.650 2.444 4.452 22 D_G17:U5_E D 17 ? E 5 ? 28 1 1 A G 18 1_555 B C 4 1_555 -0.225 0.171 0.239 3.511 -17.514 13.286 23 D_G18:C4_E D 18 ? E 4 ? ? 1 1 A C 19 1_555 B G 3 1_555 -0.374 -0.333 0.394 -4.985 -12.843 -1.046 24 D_C19:G3_E D 19 ? E 3 ? 19 1 1 A G 20 1_555 B C 2 1_555 0.115 -0.138 0.118 -1.591 -15.469 0.195 25 D_G20:C2_E D 20 ? E 2 ? 19 1 1 A C 21 1_555 B G 1 1_555 -0.269 0.098 0.587 2.066 -11.569 3.716 26 D_C21:G1_E D 21 ? E 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 20 1_555 A G 2 1_555 B C 19 1_555 -0.490 -1.677 3.181 -1.514 9.567 38.608 -3.485 0.559 2.722 14.199 2.247 39.759 1 DD_G1G2:C19C20_EE D 1 ? E 20 ? D 2 ? E 19 ? 1 A G 2 1_555 B C 19 1_555 A G 3 1_555 B C 18 1_555 -0.694 -2.105 2.553 -11.317 4.087 23.125 -5.547 -0.876 2.243 9.422 26.087 26.030 2 DD_G2G3:C18C19_EE D 2 ? E 19 ? D 3 ? E 18 ? 1 A G 3 1_555 B C 18 1_555 A C 4 1_555 B G 17 1_555 -0.544 -1.468 3.223 1.876 -3.031 35.460 -1.959 1.161 3.301 -4.961 -3.070 35.633 3 DD_G3C4:G17C18_EE D 3 ? E 18 ? D 4 ? E 17 ? 1 A C 4 1_555 B G 17 1_555 A U 5 1_555 B A 16 1_555 0.163 -1.953 3.266 -4.811 4.986 24.617 -5.742 -1.650 2.742 11.408 11.008 25.559 4 DD_C4U5:A16G17_EE D 4 ? E 17 ? D 5 ? E 16 ? 1 A U 5 1_555 B A 16 1_555 A C 6 1_555 B G 15 1_555 0.222 -1.249 2.941 2.331 0.562 42.842 -1.758 -0.096 2.933 0.768 -3.188 42.906 5 DD_U5C6:G15A16_EE D 5 ? E 16 ? D 6 ? E 15 ? 1 A C 6 1_555 B G 15 1_555 A C 7 1_555 B G 14 1_555 -0.142 -1.693 3.059 3.651 6.329 26.525 -4.919 1.082 2.552 13.471 -7.772 27.496 6 DD_C6C7:G14G15_EE D 6 ? E 15 ? D 7 ? E 14 ? 1 A C 7 1_555 B G 14 1_555 A G 8 1_555 B C 13 1_555 -0.093 -2.419 3.462 -4.716 11.800 26.275 -7.152 -0.751 2.181 24.237 9.686 29.138 7 DD_C7G8:C13G14_EE D 7 ? E 14 ? D 8 ? E 13 ? 1 A G 8 1_555 B C 13 1_555 A G 9 1_555 B C 12 1_555 0.214 -1.644 3.142 2.975 9.092 33.826 -3.949 0.046 2.634 15.251 -4.991 35.114 8 DD_G8G9:C12C13_EE D 8 ? E 13 ? D 9 ? E 12 ? 1 A G 9 1_555 B C 12 1_555 C G 2 1_555 B C 11 1_555 -0.338 -0.991 3.370 -1.012 6.527 55.187 -1.449 0.303 3.248 7.018 1.088 55.550 9 DF_G9G5:C11C12_EE D 9 ? E 12 ? F 5 ? E 11 ? 1 C G 2 1_555 B C 11 1_555 C A 3 1_555 B U 10 1_555 -0.909 -2.461 3.024 3.297 3.808 29.916 -5.366 2.311 2.585 7.311 -6.331 30.328 10 FF_G5A6:U10C11_EE F 5 ? E 11 ? F 6 ? E 10 ? 1 C A 3 1_555 B U 10 1_555 C G 4 1_555 B C 9 1_555 0.268 -1.987 3.016 5.440 10.414 25.276 -6.167 0.505 2.063 22.324 -11.661 27.833 11 FF_A6G7:C9U10_EE F 6 ? E 10 ? F 7 ? E 9 ? 1 C G 4 1_555 B C 9 1_555 C C 5 1_555 B G 8 1_555 0.819 -1.325 2.915 6.152 -4.146 32.436 -1.664 -0.465 3.154 -7.303 -10.838 33.251 12 FF_G7C8:G8C9_EE F 7 ? E 9 ? F 8 ? E 8 ? 1 C C 5 1_555 B G 8 1_555 C G 6 1_555 B C 7 1_555 2.569 -3.099 0.948 -72.517 -154.666 12.828 -0.435 -1.814 1.811 -81.023 37.988 170.880 13 FF_C8G9:C7G8_EE F 8 ? E 8 ? F 9 ? E 7 ? 1 A A 10 1_555 C U 14 1_555 A A 11 1_555 C U 13 1_555 -1.847 0.027 2.984 -32.230 -0.259 31.232 0.064 -1.044 3.418 -0.378 47.024 44.590 14 DD_A10A11:U16U17_FF D 10 ? F 17 ? D 11 ? F 16 ? 1 A A 11 1_555 C U 13 1_555 A A 12 1_555 C U 12 1_555 -0.373 -1.664 2.826 -5.162 16.380 32.130 -4.406 0.052 1.830 27.298 8.602 36.325 15 DD_A11A12:U15U16_FF D 11 ? F 16 ? D 12 ? F 15 ? 1 A A 12 1_555 C U 12 1_555 A C 13 1_555 C G 11 1_555 1.142 -1.987 3.073 1.273 -2.258 29.891 -3.388 -1.953 3.255 -4.368 -2.462 30.001 16 DD_A12C13:G14U15_FF D 12 ? F 15 ? D 13 ? F 14 ? 1 A C 13 1_555 C G 11 1_555 A C 14 1_555 C G 10 1_555 -0.109 -1.291 2.904 4.330 4.891 23.851 -4.277 1.369 2.534 11.559 -10.232 24.716 17 DD_C13C14:G13G14_FF D 13 ? F 14 ? D 14 ? F 13 ? 1 A C 14 1_555 C G 10 1_555 A G 15 1_555 C C 9 1_555 -0.038 -1.225 4.274 -3.782 27.177 52.355 -3.007 -0.206 3.324 28.684 3.992 58.657 18 DD_C14G15:C12G13_FF D 14 ? F 13 ? D 15 ? F 12 ? 1 A G 15 1_555 C C 9 1_555 A C 16 1_555 C G 8 1_555 -0.520 -1.785 2.969 1.530 -0.476 28.274 -3.548 1.384 2.966 -0.973 -3.130 28.319 19 DD_G15C16:G11C12_FF D 15 ? F 12 ? D 16 ? F 11 ? 1 A C 16 1_555 C G 8 1_555 A G 17 1_555 B U 5 1_555 2.690 -1.779 3.837 -13.156 6.093 32.050 -3.837 -6.377 2.231 10.397 22.448 35.098 20 DD_C16G17:U5G11_EF D 16 ? F 11 ? D 17 ? E 5 ? 1 A G 17 1_555 B U 5 1_555 A G 18 1_555 B C 4 1_555 0.262 -1.279 3.178 -4.999 4.590 41.737 -2.220 -0.849 2.978 6.392 6.962 42.261 21 DD_G17G18:C4U5_EE D 17 ? E 5 ? D 18 ? E 4 ? 1 A G 18 1_555 B C 4 1_555 A C 19 1_555 B G 3 1_555 -0.770 -2.051 3.389 -3.154 1.627 31.997 -4.000 0.808 3.342 2.940 5.700 32.188 22 DD_G18C19:G3C4_EE D 18 ? E 4 ? D 19 ? E 3 ? 1 A C 19 1_555 B G 3 1_555 A G 20 1_555 B C 2 1_555 0.045 -1.981 3.141 4.284 8.242 31.149 -4.824 0.585 2.532 14.937 -7.764 32.471 23 DD_C19G20:C2G3_EE D 19 ? E 3 ? D 20 ? E 2 ? 1 A G 20 1_555 B C 2 1_555 A C 21 1_555 B G 1 1_555 0.536 -1.795 3.172 -2.463 1.818 29.676 -3.846 -1.526 3.006 3.538 4.792 29.830 24 DD_G20C21:G1C2_EE D 20 ? E 2 ? D 21 ? E 1 ? # _pdbx_entity_nonpoly.entity_id 7 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2EY4 _pdbx_initial_refinement_model.details 'PDB ENTRY 2EY4' #