data_2RFU # _entry.id 2RFU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RFU pdb_00002rfu 10.2210/pdb2rfu/pdb RCSB RCSB044807 ? ? WWPDB D_1000044807 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2024-04-03 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' entity_name_com 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_molecule_features 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 16 3 'Structure model' pdbx_validate_close_contact 17 3 'Structure model' struct_asym 18 3 'Structure model' struct_conn 19 3 'Structure model' struct_site 20 3 'Structure model' struct_site_gen 21 4 'Structure model' chem_comp 22 4 'Structure model' chem_comp_atom 23 4 'Structure model' chem_comp_bond 24 4 'Structure model' database_2 25 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_entity.formula_weight' 17 3 'Structure model' '_entity.pdbx_description' 18 3 'Structure model' '_entity.pdbx_number_of_molecules' 19 3 'Structure model' '_entity.src_method' 20 3 'Structure model' '_entity.type' 21 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 22 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_asym_id' 23 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_seq_id' 24 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 25 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_seq_id' 26 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 27 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 28 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 29 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 30 3 'Structure model' '_struct_conn.pdbx_dist_value' 31 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 3 'Structure model' '_struct_conn.pdbx_role' 33 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 4 'Structure model' '_chem_comp.pdbx_synonyms' 46 4 'Structure model' '_database_2.pdbx_DOI' 47 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2RFU _pdbx_database_status.recvd_initial_deposition_date 2007-10-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2RFT _pdbx_database_related.details '2RFT is the same protein in complex with LSTa receptor analog' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, Q.' 1 'Tian, X.' 2 'Chen, X.' 3 'Ma, J.' 4 # _citation.id primary _citation.title 'Structural basis for receptor specificity of influenza B virus hemagglutinin.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 104 _citation.page_first 16874 _citation.page_last 16879 _citation.year 2007 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17942670 _citation.pdbx_database_id_DOI 10.1073/pnas.0708363104 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Q.' 1 ? primary 'Tian, X.' 2 ? primary 'Chen, X.' 3 ? primary 'Ma, J.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Influenza B hemagglutinin (HA)' 37161.562 1 ? ? ? ? 2 polymer man 'Influenza B hemagglutinin (HA)' 18948.252 1 ? ? ? ? 3 branched syn '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 4 ? ? ? ? 4 branched man 'N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 674.604 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 6 water nat water 18.015 2 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name "6'-sialyl-N-acetyllactosamine" # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DRICTGITSSNSPHVVKTATQGEVNVTGVIPLTTTPTKSHFANLKGTQTRGKLCPNCLNCTDLDVALGRPKCMGTIPSAK ASILHEVKPVTSGCFPIMHDRTKIRQLPNLLRGYENIRLSARNVTNAETAPGGPYIVGTSGSCPNVTNGNGFFATMAWAV PKNKTATNPLTVEVPYICTKGEDQITVWGFHSDDETQMVKLYGDSKPQKFTSSANGVTTHYVSQIGGFPNQAEDEGLPQS GRIVVDYMVQKPGKTGTIAYQRGVLLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGLNKSKPYYTGEHAKAIGNCPI WVKTPLKLANGTKYRPPAKLLKER ; ;DRICTGITSSNSPHVVKTATQGEVNVTGVIPLTTTPTKSHFANLKGTQTRGKLCPNCLNCTDLDVALGRPKCMGTIPSAK ASILHEVKPVTSGCFPIMHDRTKIRQLPNLLRGYENIRLSARNVTNAETAPGGPYIVGTSGSCPNVTNGNGFFATMAWAV PKNKTATNPLTVEVPYICTKGEDQITVWGFHSDDETQMVKLYGDSKPQKFTSSANGVTTHYVSQIGGFPNQAEDEGLPQS GRIVVDYMVQKPGKTGTIAYQRGVLLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGLNKSKPYYTGEHAKAIGNCPI WVKTPLKLANGTKYRPPAKLLKER ; A ? 2 'polypeptide(L)' no no ;GFFGAIAGFLEGGWEGMIAGWHGYTSHGAHGVAVAADLKSTQEAINKITKNLNSLSELEVKNLQRLSGAMDELHNEILEL DEKVDDLRADTISSQIELAVLLSNEGIINSEDEHLLALERKLKKMLGPSAVDIGNGCFETKHKCNQTCLDRIAAGTFNAG EFSLPTFDSLNITAAS ; ;GFFGAIAGFLEGGWEGMIAGWHGYTSHGAHGVAVAADLKSTQEAINKITKNLNSLSELEVKNLQRLSGAMDELHNEILEL DEKVDDLRADTISSQIELAVLLSNEGIINSEDEHLLALERKLKKMLGPSAVDIGNGCFETKHKCNQTCLDRIAAGTFNAG EFSLPTFDSLNITAAS ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ARG n 1 3 ILE n 1 4 CYS n 1 5 THR n 1 6 GLY n 1 7 ILE n 1 8 THR n 1 9 SER n 1 10 SER n 1 11 ASN n 1 12 SER n 1 13 PRO n 1 14 HIS n 1 15 VAL n 1 16 VAL n 1 17 LYS n 1 18 THR n 1 19 ALA n 1 20 THR n 1 21 GLN n 1 22 GLY n 1 23 GLU n 1 24 VAL n 1 25 ASN n 1 26 VAL n 1 27 THR n 1 28 GLY n 1 29 VAL n 1 30 ILE n 1 31 PRO n 1 32 LEU n 1 33 THR n 1 34 THR n 1 35 THR n 1 36 PRO n 1 37 THR n 1 38 LYS n 1 39 SER n 1 40 HIS n 1 41 PHE n 1 42 ALA n 1 43 ASN n 1 44 LEU n 1 45 LYS n 1 46 GLY n 1 47 THR n 1 48 GLN n 1 49 THR n 1 50 ARG n 1 51 GLY n 1 52 LYS n 1 53 LEU n 1 54 CYS n 1 55 PRO n 1 56 ASN n 1 57 CYS n 1 58 LEU n 1 59 ASN n 1 60 CYS n 1 61 THR n 1 62 ASP n 1 63 LEU n 1 64 ASP n 1 65 VAL n 1 66 ALA n 1 67 LEU n 1 68 GLY n 1 69 ARG n 1 70 PRO n 1 71 LYS n 1 72 CYS n 1 73 MET n 1 74 GLY n 1 75 THR n 1 76 ILE n 1 77 PRO n 1 78 SER n 1 79 ALA n 1 80 LYS n 1 81 ALA n 1 82 SER n 1 83 ILE n 1 84 LEU n 1 85 HIS n 1 86 GLU n 1 87 VAL n 1 88 LYS n 1 89 PRO n 1 90 VAL n 1 91 THR n 1 92 SER n 1 93 GLY n 1 94 CYS n 1 95 PHE n 1 96 PRO n 1 97 ILE n 1 98 MET n 1 99 HIS n 1 100 ASP n 1 101 ARG n 1 102 THR n 1 103 LYS n 1 104 ILE n 1 105 ARG n 1 106 GLN n 1 107 LEU n 1 108 PRO n 1 109 ASN n 1 110 LEU n 1 111 LEU n 1 112 ARG n 1 113 GLY n 1 114 TYR n 1 115 GLU n 1 116 ASN n 1 117 ILE n 1 118 ARG n 1 119 LEU n 1 120 SER n 1 121 ALA n 1 122 ARG n 1 123 ASN n 1 124 VAL n 1 125 THR n 1 126 ASN n 1 127 ALA n 1 128 GLU n 1 129 THR n 1 130 ALA n 1 131 PRO n 1 132 GLY n 1 133 GLY n 1 134 PRO n 1 135 TYR n 1 136 ILE n 1 137 VAL n 1 138 GLY n 1 139 THR n 1 140 SER n 1 141 GLY n 1 142 SER n 1 143 CYS n 1 144 PRO n 1 145 ASN n 1 146 VAL n 1 147 THR n 1 148 ASN n 1 149 GLY n 1 150 ASN n 1 151 GLY n 1 152 PHE n 1 153 PHE n 1 154 ALA n 1 155 THR n 1 156 MET n 1 157 ALA n 1 158 TRP n 1 159 ALA n 1 160 VAL n 1 161 PRO n 1 162 LYS n 1 163 ASN n 1 164 LYS n 1 165 THR n 1 166 ALA n 1 167 THR n 1 168 ASN n 1 169 PRO n 1 170 LEU n 1 171 THR n 1 172 VAL n 1 173 GLU n 1 174 VAL n 1 175 PRO n 1 176 TYR n 1 177 ILE n 1 178 CYS n 1 179 THR n 1 180 LYS n 1 181 GLY n 1 182 GLU n 1 183 ASP n 1 184 GLN n 1 185 ILE n 1 186 THR n 1 187 VAL n 1 188 TRP n 1 189 GLY n 1 190 PHE n 1 191 HIS n 1 192 SER n 1 193 ASP n 1 194 ASP n 1 195 GLU n 1 196 THR n 1 197 GLN n 1 198 MET n 1 199 VAL n 1 200 LYS n 1 201 LEU n 1 202 TYR n 1 203 GLY n 1 204 ASP n 1 205 SER n 1 206 LYS n 1 207 PRO n 1 208 GLN n 1 209 LYS n 1 210 PHE n 1 211 THR n 1 212 SER n 1 213 SER n 1 214 ALA n 1 215 ASN n 1 216 GLY n 1 217 VAL n 1 218 THR n 1 219 THR n 1 220 HIS n 1 221 TYR n 1 222 VAL n 1 223 SER n 1 224 GLN n 1 225 ILE n 1 226 GLY n 1 227 GLY n 1 228 PHE n 1 229 PRO n 1 230 ASN n 1 231 GLN n 1 232 ALA n 1 233 GLU n 1 234 ASP n 1 235 GLU n 1 236 GLY n 1 237 LEU n 1 238 PRO n 1 239 GLN n 1 240 SER n 1 241 GLY n 1 242 ARG n 1 243 ILE n 1 244 VAL n 1 245 VAL n 1 246 ASP n 1 247 TYR n 1 248 MET n 1 249 VAL n 1 250 GLN n 1 251 LYS n 1 252 PRO n 1 253 GLY n 1 254 LYS n 1 255 THR n 1 256 GLY n 1 257 THR n 1 258 ILE n 1 259 ALA n 1 260 TYR n 1 261 GLN n 1 262 ARG n 1 263 GLY n 1 264 VAL n 1 265 LEU n 1 266 LEU n 1 267 PRO n 1 268 GLN n 1 269 LYS n 1 270 VAL n 1 271 TRP n 1 272 CYS n 1 273 ALA n 1 274 SER n 1 275 GLY n 1 276 ARG n 1 277 SER n 1 278 LYS n 1 279 VAL n 1 280 ILE n 1 281 LYS n 1 282 GLY n 1 283 SER n 1 284 LEU n 1 285 PRO n 1 286 LEU n 1 287 ILE n 1 288 GLY n 1 289 GLU n 1 290 ALA n 1 291 ASP n 1 292 CYS n 1 293 LEU n 1 294 HIS n 1 295 GLU n 1 296 LYS n 1 297 TYR n 1 298 GLY n 1 299 GLY n 1 300 LEU n 1 301 ASN n 1 302 LYS n 1 303 SER n 1 304 LYS n 1 305 PRO n 1 306 TYR n 1 307 TYR n 1 308 THR n 1 309 GLY n 1 310 GLU n 1 311 HIS n 1 312 ALA n 1 313 LYS n 1 314 ALA n 1 315 ILE n 1 316 GLY n 1 317 ASN n 1 318 CYS n 1 319 PRO n 1 320 ILE n 1 321 TRP n 1 322 VAL n 1 323 LYS n 1 324 THR n 1 325 PRO n 1 326 LEU n 1 327 LYS n 1 328 LEU n 1 329 ALA n 1 330 ASN n 1 331 GLY n 1 332 THR n 1 333 LYS n 1 334 TYR n 1 335 ARG n 1 336 PRO n 1 337 PRO n 1 338 ALA n 1 339 LYS n 1 340 LEU n 1 341 LEU n 1 342 LYS n 1 343 GLU n 1 344 ARG n 2 1 GLY n 2 2 PHE n 2 3 PHE n 2 4 GLY n 2 5 ALA n 2 6 ILE n 2 7 ALA n 2 8 GLY n 2 9 PHE n 2 10 LEU n 2 11 GLU n 2 12 GLY n 2 13 GLY n 2 14 TRP n 2 15 GLU n 2 16 GLY n 2 17 MET n 2 18 ILE n 2 19 ALA n 2 20 GLY n 2 21 TRP n 2 22 HIS n 2 23 GLY n 2 24 TYR n 2 25 THR n 2 26 SER n 2 27 HIS n 2 28 GLY n 2 29 ALA n 2 30 HIS n 2 31 GLY n 2 32 VAL n 2 33 ALA n 2 34 VAL n 2 35 ALA n 2 36 ALA n 2 37 ASP n 2 38 LEU n 2 39 LYS n 2 40 SER n 2 41 THR n 2 42 GLN n 2 43 GLU n 2 44 ALA n 2 45 ILE n 2 46 ASN n 2 47 LYS n 2 48 ILE n 2 49 THR n 2 50 LYS n 2 51 ASN n 2 52 LEU n 2 53 ASN n 2 54 SER n 2 55 LEU n 2 56 SER n 2 57 GLU n 2 58 LEU n 2 59 GLU n 2 60 VAL n 2 61 LYS n 2 62 ASN n 2 63 LEU n 2 64 GLN n 2 65 ARG n 2 66 LEU n 2 67 SER n 2 68 GLY n 2 69 ALA n 2 70 MET n 2 71 ASP n 2 72 GLU n 2 73 LEU n 2 74 HIS n 2 75 ASN n 2 76 GLU n 2 77 ILE n 2 78 LEU n 2 79 GLU n 2 80 LEU n 2 81 ASP n 2 82 GLU n 2 83 LYS n 2 84 VAL n 2 85 ASP n 2 86 ASP n 2 87 LEU n 2 88 ARG n 2 89 ALA n 2 90 ASP n 2 91 THR n 2 92 ILE n 2 93 SER n 2 94 SER n 2 95 GLN n 2 96 ILE n 2 97 GLU n 2 98 LEU n 2 99 ALA n 2 100 VAL n 2 101 LEU n 2 102 LEU n 2 103 SER n 2 104 ASN n 2 105 GLU n 2 106 GLY n 2 107 ILE n 2 108 ILE n 2 109 ASN n 2 110 SER n 2 111 GLU n 2 112 ASP n 2 113 GLU n 2 114 HIS n 2 115 LEU n 2 116 LEU n 2 117 ALA n 2 118 LEU n 2 119 GLU n 2 120 ARG n 2 121 LYS n 2 122 LEU n 2 123 LYS n 2 124 LYS n 2 125 MET n 2 126 LEU n 2 127 GLY n 2 128 PRO n 2 129 SER n 2 130 ALA n 2 131 VAL n 2 132 ASP n 2 133 ILE n 2 134 GLY n 2 135 ASN n 2 136 GLY n 2 137 CYS n 2 138 PHE n 2 139 GLU n 2 140 THR n 2 141 LYS n 2 142 HIS n 2 143 LYS n 2 144 CYS n 2 145 ASN n 2 146 GLN n 2 147 THR n 2 148 CYS n 2 149 LEU n 2 150 ASP n 2 151 ARG n 2 152 ILE n 2 153 ALA n 2 154 ALA n 2 155 GLY n 2 156 THR n 2 157 PHE n 2 158 ASN n 2 159 ALA n 2 160 GLY n 2 161 GLU n 2 162 PHE n 2 163 SER n 2 164 LEU n 2 165 PRO n 2 166 THR n 2 167 PHE n 2 168 ASP n 2 169 SER n 2 170 LEU n 2 171 ASN n 2 172 ILE n 2 173 THR n 2 174 ALA n 2 175 ALA n 2 176 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? 'Influenzavirus B' Hemagglutinin 'Influenza B virus' B/HongKong/8/73 ? ? ? ? 'Influenza B virus (STRAIN B/HONG KONG/8/73)' 11531 ? ? ? ? ? ? ? ? 'Influenza B virus' 11520 'Influenzavirus B' ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? 'Influenzavirus B' Hemagglutinin 'Influenza B virus' B/HongKong/8/73 ? ? ? ? 'Influenza B virus (STRAIN B/HONG KONG/8/73)' 11531 ? ? ? ? ? ? ? ? 'Influenza B virus' 11520 'Influenzavirus B' ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? 4 4 DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/3,3,2/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a4-b1_b6-c2' WURCS PDB2Glycan 1.1.0 6 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-Galp]{[(6+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 2 GAL C1 O1 1 NAG O4 HO4 sing ? 3 4 3 SIA C2 O2 2 GAL O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 HIS 85 85 85 HIS HIS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 PRO 131 131 131 PRO PRO A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 CYS 143 143 143 CYS CYS A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 MET 156 156 156 MET MET A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 TRP 158 158 158 TRP TRP A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 THR 165 165 165 THR THR A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 ASN 168 168 168 ASN ASN A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 GLN 184 184 184 GLN GLN A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 TRP 188 188 188 TRP TRP A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 PHE 190 190 190 PHE PHE A . n A 1 191 HIS 191 191 191 HIS HIS A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 MET 198 198 198 MET MET A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 TYR 202 202 202 TYR TYR A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 SER 205 205 205 SER SER A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 GLN 208 208 208 GLN GLN A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 PHE 210 210 210 PHE PHE A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 ASN 215 215 215 ASN ASN A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 HIS 220 220 220 HIS HIS A . n A 1 221 TYR 221 221 221 TYR TYR A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 GLN 224 224 224 GLN GLN A . n A 1 225 ILE 225 225 225 ILE ILE A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 PHE 228 228 228 PHE PHE A . n A 1 229 PRO 229 229 229 PRO PRO A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 GLN 231 231 231 GLN GLN A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 ASP 234 234 234 ASP ASP A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 PRO 238 238 238 PRO PRO A . n A 1 239 GLN 239 239 239 GLN GLN A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 ARG 242 242 242 ARG ARG A . n A 1 243 ILE 243 243 243 ILE ILE A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 VAL 245 245 245 VAL VAL A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 TYR 247 247 247 TYR TYR A . n A 1 248 MET 248 248 248 MET MET A . n A 1 249 VAL 249 249 249 VAL VAL A . n A 1 250 GLN 250 250 250 GLN GLN A . n A 1 251 LYS 251 251 251 LYS LYS A . n A 1 252 PRO 252 252 252 PRO PRO A . n A 1 253 GLY 253 253 253 GLY GLY A . n A 1 254 LYS 254 254 254 LYS LYS A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 THR 257 257 257 THR THR A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 TYR 260 260 260 TYR TYR A . n A 1 261 GLN 261 261 261 GLN GLN A . n A 1 262 ARG 262 262 262 ARG ARG A . n A 1 263 GLY 263 263 263 GLY GLY A . n A 1 264 VAL 264 264 264 VAL VAL A . n A 1 265 LEU 265 265 265 LEU LEU A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 PRO 267 267 267 PRO PRO A . n A 1 268 GLN 268 268 268 GLN GLN A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 TRP 271 271 271 TRP TRP A . n A 1 272 CYS 272 272 272 CYS CYS A . n A 1 273 ALA 273 273 273 ALA ALA A . n A 1 274 SER 274 274 274 SER SER A . n A 1 275 GLY 275 275 275 GLY GLY A . n A 1 276 ARG 276 276 276 ARG ARG A . n A 1 277 SER 277 277 277 SER SER A . n A 1 278 LYS 278 278 278 LYS LYS A . n A 1 279 VAL 279 279 279 VAL VAL A . n A 1 280 ILE 280 280 280 ILE ILE A . n A 1 281 LYS 281 281 281 LYS LYS A . n A 1 282 GLY 282 282 282 GLY GLY A . n A 1 283 SER 283 283 283 SER SER A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 PRO 285 285 285 PRO PRO A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 ILE 287 287 287 ILE ILE A . n A 1 288 GLY 288 288 288 GLY GLY A . n A 1 289 GLU 289 289 289 GLU GLU A . n A 1 290 ALA 290 290 290 ALA ALA A . n A 1 291 ASP 291 291 291 ASP ASP A . n A 1 292 CYS 292 292 292 CYS CYS A . n A 1 293 LEU 293 293 293 LEU LEU A . n A 1 294 HIS 294 294 294 HIS HIS A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 LYS 296 296 296 LYS LYS A . n A 1 297 TYR 297 297 297 TYR TYR A . n A 1 298 GLY 298 298 298 GLY GLY A . n A 1 299 GLY 299 299 299 GLY GLY A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 ASN 301 301 301 ASN ASN A . n A 1 302 LYS 302 302 302 LYS LYS A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 PRO 305 305 305 PRO PRO A . n A 1 306 TYR 306 306 306 TYR TYR A . n A 1 307 TYR 307 307 307 TYR TYR A . n A 1 308 THR 308 308 308 THR THR A . n A 1 309 GLY 309 309 309 GLY GLY A . n A 1 310 GLU 310 310 310 GLU GLU A . n A 1 311 HIS 311 311 311 HIS HIS A . n A 1 312 ALA 312 312 312 ALA ALA A . n A 1 313 LYS 313 313 313 LYS LYS A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 ILE 315 315 315 ILE ILE A . n A 1 316 GLY 316 316 316 GLY GLY A . n A 1 317 ASN 317 317 317 ASN ASN A . n A 1 318 CYS 318 318 318 CYS CYS A . n A 1 319 PRO 319 319 319 PRO PRO A . n A 1 320 ILE 320 320 320 ILE ILE A . n A 1 321 TRP 321 321 321 TRP TRP A . n A 1 322 VAL 322 322 322 VAL VAL A . n A 1 323 LYS 323 323 323 LYS LYS A . n A 1 324 THR 324 324 324 THR THR A . n A 1 325 PRO 325 325 325 PRO PRO A . n A 1 326 LEU 326 326 326 LEU LEU A . n A 1 327 LYS 327 327 327 LYS LYS A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 ALA 329 329 329 ALA ALA A . n A 1 330 ASN 330 330 330 ASN ASN A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 THR 332 332 332 THR THR A . n A 1 333 LYS 333 333 333 LYS LYS A . n A 1 334 TYR 334 334 334 TYR TYR A . n A 1 335 ARG 335 335 335 ARG ARG A . n A 1 336 PRO 336 336 336 PRO PRO A . n A 1 337 PRO 337 337 337 PRO PRO A . n A 1 338 ALA 338 338 338 ALA ALA A . n A 1 339 LYS 339 339 339 LYS LYS A . n A 1 340 LEU 340 340 340 LEU LEU A . n A 1 341 LEU 341 341 341 LEU LEU A . n A 1 342 LYS 342 342 342 LYS LYS A . n A 1 343 GLU 343 343 ? ? ? A . n A 1 344 ARG 344 344 ? ? ? A . n B 2 1 GLY 1 1 1 GLY GLY B . n B 2 2 PHE 2 2 2 PHE PHE B . n B 2 3 PHE 3 3 3 PHE PHE B . n B 2 4 GLY 4 4 4 GLY GLY B . n B 2 5 ALA 5 5 5 ALA ALA B . n B 2 6 ILE 6 6 6 ILE ILE B . n B 2 7 ALA 7 7 7 ALA ALA B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 PHE 9 9 9 PHE PHE B . n B 2 10 LEU 10 10 10 LEU LEU B . n B 2 11 GLU 11 11 11 GLU GLU B . n B 2 12 GLY 12 12 12 GLY GLY B . n B 2 13 GLY 13 13 13 GLY GLY B . n B 2 14 TRP 14 14 14 TRP TRP B . n B 2 15 GLU 15 15 15 GLU GLU B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 MET 17 17 17 MET MET B . n B 2 18 ILE 18 18 18 ILE ILE B . n B 2 19 ALA 19 19 19 ALA ALA B . n B 2 20 GLY 20 20 20 GLY GLY B . n B 2 21 TRP 21 21 21 TRP TRP B . n B 2 22 HIS 22 22 22 HIS HIS B . n B 2 23 GLY 23 23 23 GLY GLY B . n B 2 24 TYR 24 24 24 TYR TYR B . n B 2 25 THR 25 25 25 THR THR B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 HIS 27 27 27 HIS HIS B . n B 2 28 GLY 28 28 28 GLY GLY B . n B 2 29 ALA 29 29 29 ALA ALA B . n B 2 30 HIS 30 30 30 HIS HIS B . n B 2 31 GLY 31 31 31 GLY GLY B . n B 2 32 VAL 32 32 32 VAL VAL B . n B 2 33 ALA 33 33 33 ALA ALA B . n B 2 34 VAL 34 34 34 VAL VAL B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 ALA 36 36 36 ALA ALA B . n B 2 37 ASP 37 37 37 ASP ASP B . n B 2 38 LEU 38 38 38 LEU LEU B . n B 2 39 LYS 39 39 39 LYS LYS B . n B 2 40 SER 40 40 40 SER SER B . n B 2 41 THR 41 41 41 THR THR B . n B 2 42 GLN 42 42 42 GLN GLN B . n B 2 43 GLU 43 43 43 GLU GLU B . n B 2 44 ALA 44 44 44 ALA ALA B . n B 2 45 ILE 45 45 45 ILE ILE B . n B 2 46 ASN 46 46 46 ASN ASN B . n B 2 47 LYS 47 47 47 LYS LYS B . n B 2 48 ILE 48 48 48 ILE ILE B . n B 2 49 THR 49 49 49 THR THR B . n B 2 50 LYS 50 50 50 LYS LYS B . n B 2 51 ASN 51 51 51 ASN ASN B . n B 2 52 LEU 52 52 52 LEU LEU B . n B 2 53 ASN 53 53 53 ASN ASN B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 LEU 55 55 55 LEU LEU B . n B 2 56 SER 56 56 56 SER SER B . n B 2 57 GLU 57 57 57 GLU GLU B . n B 2 58 LEU 58 58 58 LEU LEU B . n B 2 59 GLU 59 59 59 GLU GLU B . n B 2 60 VAL 60 60 60 VAL VAL B . n B 2 61 LYS 61 61 61 LYS LYS B . n B 2 62 ASN 62 62 62 ASN ASN B . n B 2 63 LEU 63 63 63 LEU LEU B . n B 2 64 GLN 64 64 64 GLN GLN B . n B 2 65 ARG 65 65 65 ARG ARG B . n B 2 66 LEU 66 66 66 LEU LEU B . n B 2 67 SER 67 67 67 SER SER B . n B 2 68 GLY 68 68 68 GLY GLY B . n B 2 69 ALA 69 69 69 ALA ALA B . n B 2 70 MET 70 70 70 MET MET B . n B 2 71 ASP 71 71 71 ASP ASP B . n B 2 72 GLU 72 72 72 GLU GLU B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 HIS 74 74 74 HIS HIS B . n B 2 75 ASN 75 75 75 ASN ASN B . n B 2 76 GLU 76 76 76 GLU GLU B . n B 2 77 ILE 77 77 77 ILE ILE B . n B 2 78 LEU 78 78 78 LEU LEU B . n B 2 79 GLU 79 79 79 GLU GLU B . n B 2 80 LEU 80 80 80 LEU LEU B . n B 2 81 ASP 81 81 81 ASP ASP B . n B 2 82 GLU 82 82 82 GLU GLU B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 VAL 84 84 84 VAL VAL B . n B 2 85 ASP 85 85 85 ASP ASP B . n B 2 86 ASP 86 86 86 ASP ASP B . n B 2 87 LEU 87 87 87 LEU LEU B . n B 2 88 ARG 88 88 88 ARG ARG B . n B 2 89 ALA 89 89 89 ALA ALA B . n B 2 90 ASP 90 90 90 ASP ASP B . n B 2 91 THR 91 91 91 THR THR B . n B 2 92 ILE 92 92 92 ILE ILE B . n B 2 93 SER 93 93 93 SER SER B . n B 2 94 SER 94 94 94 SER SER B . n B 2 95 GLN 95 95 95 GLN GLN B . n B 2 96 ILE 96 96 96 ILE ILE B . n B 2 97 GLU 97 97 97 GLU GLU B . n B 2 98 LEU 98 98 98 LEU LEU B . n B 2 99 ALA 99 99 99 ALA ALA B . n B 2 100 VAL 100 100 100 VAL VAL B . n B 2 101 LEU 101 101 101 LEU LEU B . n B 2 102 LEU 102 102 102 LEU LEU B . n B 2 103 SER 103 103 103 SER SER B . n B 2 104 ASN 104 104 104 ASN ASN B . n B 2 105 GLU 105 105 105 GLU GLU B . n B 2 106 GLY 106 106 106 GLY GLY B . n B 2 107 ILE 107 107 107 ILE ILE B . n B 2 108 ILE 108 108 108 ILE ILE B . n B 2 109 ASN 109 109 109 ASN ASN B . n B 2 110 SER 110 110 110 SER SER B . n B 2 111 GLU 111 111 111 GLU GLU B . n B 2 112 ASP 112 112 112 ASP ASP B . n B 2 113 GLU 113 113 113 GLU GLU B . n B 2 114 HIS 114 114 114 HIS HIS B . n B 2 115 LEU 115 115 115 LEU LEU B . n B 2 116 LEU 116 116 116 LEU LEU B . n B 2 117 ALA 117 117 117 ALA ALA B . n B 2 118 LEU 118 118 118 LEU LEU B . n B 2 119 GLU 119 119 119 GLU GLU B . n B 2 120 ARG 120 120 120 ARG ARG B . n B 2 121 LYS 121 121 121 LYS LYS B . n B 2 122 LEU 122 122 122 LEU LEU B . n B 2 123 LYS 123 123 123 LYS LYS B . n B 2 124 LYS 124 124 124 LYS LYS B . n B 2 125 MET 125 125 125 MET MET B . n B 2 126 LEU 126 126 126 LEU LEU B . n B 2 127 GLY 127 127 127 GLY GLY B . n B 2 128 PRO 128 128 128 PRO PRO B . n B 2 129 SER 129 129 129 SER SER B . n B 2 130 ALA 130 130 130 ALA ALA B . n B 2 131 VAL 131 131 131 VAL VAL B . n B 2 132 ASP 132 132 132 ASP ASP B . n B 2 133 ILE 133 133 133 ILE ILE B . n B 2 134 GLY 134 134 134 GLY GLY B . n B 2 135 ASN 135 135 135 ASN ASN B . n B 2 136 GLY 136 136 136 GLY GLY B . n B 2 137 CYS 137 137 137 CYS CYS B . n B 2 138 PHE 138 138 138 PHE PHE B . n B 2 139 GLU 139 139 139 GLU GLU B . n B 2 140 THR 140 140 140 THR THR B . n B 2 141 LYS 141 141 141 LYS LYS B . n B 2 142 HIS 142 142 142 HIS HIS B . n B 2 143 LYS 143 143 143 LYS LYS B . n B 2 144 CYS 144 144 144 CYS CYS B . n B 2 145 ASN 145 145 145 ASN ASN B . n B 2 146 GLN 146 146 146 GLN GLN B . n B 2 147 THR 147 147 147 THR THR B . n B 2 148 CYS 148 148 148 CYS CYS B . n B 2 149 LEU 149 149 149 LEU LEU B . n B 2 150 ASP 150 150 150 ASP ASP B . n B 2 151 ARG 151 151 151 ARG ARG B . n B 2 152 ILE 152 152 152 ILE ILE B . n B 2 153 ALA 153 153 153 ALA ALA B . n B 2 154 ALA 154 154 154 ALA ALA B . n B 2 155 GLY 155 155 155 GLY GLY B . n B 2 156 THR 156 156 156 THR THR B . n B 2 157 PHE 157 157 157 PHE PHE B . n B 2 158 ASN 158 158 158 ASN ASN B . n B 2 159 ALA 159 159 159 ALA ALA B . n B 2 160 GLY 160 160 160 GLY GLY B . n B 2 161 GLU 161 161 161 GLU GLU B . n B 2 162 PHE 162 162 162 PHE PHE B . n B 2 163 SER 163 163 163 SER SER B . n B 2 164 LEU 164 164 164 LEU LEU B . n B 2 165 PRO 165 165 165 PRO PRO B . n B 2 166 THR 166 166 166 THR THR B . n B 2 167 PHE 167 167 167 PHE PHE B . n B 2 168 ASP 168 168 168 ASP ASP B . n B 2 169 SER 169 169 169 SER SER B . n B 2 170 LEU 170 170 ? ? ? B . n B 2 171 ASN 171 171 ? ? ? B . n B 2 172 ILE 172 172 ? ? ? B . n B 2 173 THR 173 173 ? ? ? B . n B 2 174 ALA 174 174 ? ? ? B . n B 2 175 ALA 175 175 ? ? ? B . n B 2 176 SER 176 176 ? ? ? B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 ? NAG 1 n C 3 NAG 2 C NAG 2 ? NAG 2 n D 3 NAG 1 D NAG 1 ? NAG 11 n D 3 NAG 2 D NAG 2 ? NAG 12 n E 3 NAG 1 E NAG 1 ? NAG 41 n E 3 NAG 2 E NAG 2 ? NAG 42 n F 3 NAG 1 F NAG 1 ? NAG 51 n F 3 NAG 2 F NAG 2 ? NAG 52 n G 4 NAG 1 G NAG 1 ? NAG 803 n G 4 GAL 2 G GAL 2 ? GAL 802 n G 4 SIA 3 G SIA 3 ? SIA 801 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code H 5 NAG 1 347 21 NAG NAG A . I 5 NAG 1 348 31 NAG NAG A . J 5 NAG 1 170 61 NAG NAG B . K 6 HOH 1 804 101 HOH HOH A . K 6 HOH 2 805 102 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 D NAG 1 ? O1 ? D NAG 1 O1 2 1 N 1 G NAG 1 ? O1 ? G NAG 1 O1 3 1 N 1 A NAG 348 ? O1 ? I NAG 1 O1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 AMoRE phasing . ? 5 # _cell.entry_id 2RFU _cell.length_a 98.369 _cell.length_b 98.369 _cell.length_c 135.896 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2RFU _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2RFU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.38 _exptl_crystal.density_percent_sol 63.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '100 mM Pipes, 2.5 M ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-11-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bent Ge(111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.entry_id 2RFU _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.7 _reflns.number_obs 19705 _reflns.number_all 21280 _reflns.percent_possible_obs 92.6 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 89.9 _reflns_shell.Rmerge_I_obs 0.297 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2RFU _refine.ls_number_reflns_obs 15990 _refine.ls_number_reflns_all 17320 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 92.32 _refine.ls_R_factor_obs 0.29627 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.29466 _refine.ls_R_factor_R_free 0.31093 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 1753 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.887 _refine.correlation_coeff_Fo_to_Fc_free 0.875 _refine.B_iso_mean 52.168 _refine.aniso_B[1][1] 6.59 _refine.aniso_B[2][2] 6.59 _refine.aniso_B[3][3] -9.89 _refine.aniso_B[1][2] 3.30 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Unliganded influenza B virus hemagglutinin' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.467 _refine.overall_SU_ML 0.391 _refine.overall_SU_B 20.930 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3864 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 199 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 4065 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 4159 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2792 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.519 2.018 ? 5656 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.658 3.004 ? 6807 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.784 5.000 ? 509 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.401 25.000 ? 156 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.975 15.000 ? 675 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.418 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.072 0.200 ? 670 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 4442 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 722 'X-RAY DIFFRACTION' ? r_nbd_refined 0.245 0.200 ? 1142 'X-RAY DIFFRACTION' ? r_nbd_other 0.242 0.200 ? 3063 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.189 0.200 ? 2010 'X-RAY DIFFRACTION' ? r_nbtor_other 0.105 0.200 ? 2254 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.192 0.200 ? 154 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.011 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.235 0.200 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.236 0.200 ? 77 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.179 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.364 3.000 ? 3244 'X-RAY DIFFRACTION' ? r_mcbond_other 0.124 3.000 ? 1044 'X-RAY DIFFRACTION' ? r_mcangle_it 1.631 5.000 ? 4078 'X-RAY DIFFRACTION' ? r_scbond_it 1.974 6.000 ? 1852 'X-RAY DIFFRACTION' ? r_scangle_it 3.041 8.000 ? 1578 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.871 _refine_ls_shell.number_reflns_R_work 1116 _refine_ls_shell.R_factor_R_work 0.443 _refine_ls_shell.percent_reflns_obs 90.49 _refine_ls_shell.R_factor_R_free 0.453 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 131 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2RFU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2RFU _struct.title 'Crystal structure of influenza B virus hemagglutinin in complex with LSTc receptor analog' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RFU _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text ;Influenza, receptor specificity, human receptor analog, Envelope protein, Fusion protein, Hemagglutinin, Membrane, Transmembrane, Virion, Glycoprotein, Lipoprotein, Palmitate, VIRAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q84097_9INFB Q84097 1 ;DRICTGITSSNSPHVVKTATQGEVNVTGVIPLTTTPTKSHFANLKGTQTRGKLCPNCLNCTDLDVALGRPKCMGTIPSAK ASILHEVKPVTSGCFPIMHDRTKIRQLPNLLRGYENIRLSARNVTNAETAPGGPYIVGTSGSCPNVTNGNGFFATMAWAV PKNKTATNPLTVEVPYICTKGEDQITVWGFHSDDETQMVKLYGDSKPQKFTSSANGVTTHYVSQIGGFPNQAEDEGLPQS GRIVVDYMVQKPGKTGTIAYQRGVLLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGLNKSKPYYTGEHAKAIGNCPI WVKTPLKLANGTKYRPPAKLLKER ; 16 ? 2 UNP Q84097_9INFB Q84097 2 ;GFFGAIAGFLEGGWEGMIAGWHGYTSHGAHGVAVAADLKSTQEAINKITKNLNSLSELEVKNLQRLSGAMDELHNEILEL DEKVDDLRADTISSQIELAVLLSNEGIINSEDEHLLALERKLKKMLGPSAVDIGNGCFETKHKCNQTCLDRIAAGTFNAG EFSLPTFDSLNITAAS ; 360 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2RFU A 1 ? 344 ? Q84097 16 ? 359 ? 1 344 2 2 2RFU B 1 ? 176 ? Q84097 360 ? 535 ? 1 176 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 44650 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 98.3690000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 49.1845000000 -0.8660254038 -0.5000000000 0.0000000000 85.1900529449 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 61 ? GLY A 68 ? THR A 61 GLY A 68 1 ? 8 HELX_P HELX_P2 2 MET A 98 ? ARG A 105 ? MET A 98 ARG A 105 5 ? 8 HELX_P HELX_P3 3 GLN A 106 ? GLY A 113 ? GLN A 106 GLY A 113 1 ? 8 HELX_P HELX_P4 4 ASP A 194 ? TYR A 202 ? ASP A 194 TYR A 202 1 ? 9 HELX_P HELX_P5 5 GLY B 1 ? ALA B 7 ? GLY B 1 ALA B 7 1 ? 7 HELX_P HELX_P6 6 LYS B 39 ? LEU B 58 ? LYS B 39 LEU B 58 1 ? 20 HELX_P HELX_P7 7 HIS B 74 ? GLY B 127 ? HIS B 74 GLY B 127 1 ? 54 HELX_P HELX_P8 8 ASN B 145 ? GLY B 155 ? ASN B 145 GLY B 155 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 B CYS 137 SG ? ? A CYS 4 B CYS 137 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf2 disulf ? ? A CYS 54 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 54 A CYS 57 1_555 ? ? ? ? ? ? ? 2.014 ? ? disulf3 disulf ? ? A CYS 60 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 60 A CYS 72 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf4 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 143 SG ? ? A CYS 94 A CYS 143 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf5 disulf ? ? A CYS 178 SG ? ? ? 1_555 A CYS 272 SG ? ? A CYS 178 A CYS 272 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf6 disulf ? ? A CYS 292 SG ? ? ? 1_555 A CYS 318 SG ? ? A CYS 292 A CYS 318 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf7 disulf ? ? B CYS 144 SG ? ? ? 1_555 B CYS 148 SG ? ? B CYS 144 B CYS 148 1_555 ? ? ? ? ? ? ? 2.052 ? ? covale1 covale one ? A ASN 25 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 25 C NAG 1 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale2 covale one ? A ASN 145 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 145 A NAG 347 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale3 covale one ? A ASN 301 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 301 E NAG 1 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale4 covale one ? A ASN 330 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 330 F NAG 1 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale5 covale one ? B ASN 145 ND2 ? ? ? 1_555 J NAG . C1 ? ? B ASN 145 B NAG 170 1_555 ? ? ? ? ? ? ? 1.456 ? N-Glycosylation covale6 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale7 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.454 ? ? covale8 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale9 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale10 covale both ? G NAG . O4 ? ? ? 1_555 G GAL . C1 ? ? G NAG 1 G GAL 2 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale11 covale both ? G GAL . O6 ? ? ? 1_555 G SIA . C2 ? ? G GAL 2 G SIA 3 1_555 ? ? ? ? ? ? ? 1.438 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 3 ? F ? 6 ? G ? 4 ? H ? 4 ? I ? 3 ? J ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel E 1 2 ? parallel E 2 3 ? parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel F 5 6 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel J 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY B 31 ? ALA B 36 ? GLY B 31 ALA B 36 A 2 HIS B 22 ? GLY B 28 ? HIS B 22 GLY B 28 A 3 ARG A 2 ? ILE A 7 ? ARG A 2 ILE A 7 A 4 CYS B 137 ? GLU B 139 ? CYS B 137 GLU B 139 A 5 VAL B 131 ? ASP B 132 ? VAL B 131 ASP B 132 B 1 HIS A 14 ? LYS A 17 ? HIS A 14 LYS A 17 B 2 GLU A 23 ? VAL A 26 ? GLU A 23 VAL A 26 C 1 VAL A 29 ? PRO A 31 ? VAL A 29 PRO A 31 C 2 LYS A 327 ? ALA A 329 ? LYS A 327 ALA A 329 D 1 ASN A 43 ? LEU A 44 ? ASN A 43 LEU A 44 D 2 GLU A 289 ? ALA A 290 ? GLU A 289 ALA A 290 E 1 THR A 49 ? ARG A 50 ? THR A 49 ARG A 50 E 2 ALA A 81 ? ILE A 83 ? ALA A 81 ILE A 83 E 3 LYS A 278 ? ILE A 280 ? LYS A 278 ILE A 280 F 1 TYR A 114 ? ARG A 118 ? TYR A 114 ARG A 118 F 2 TRP A 271 ? ARG A 276 ? TRP A 271 ARG A 276 F 3 ASP A 183 ? SER A 192 ? ASP A 183 SER A 192 F 4 VAL A 264 ? PRO A 267 ? VAL A 264 PRO A 267 F 5 MET A 156 ? PRO A 161 ? MET A 156 PRO A 161 F 6 TYR A 135 ? GLY A 138 ? TYR A 135 GLY A 138 G 1 TYR A 114 ? ARG A 118 ? TYR A 114 ARG A 118 G 2 TRP A 271 ? ARG A 276 ? TRP A 271 ARG A 276 G 3 ASP A 183 ? SER A 192 ? ASP A 183 SER A 192 G 4 ARG A 242 ? GLN A 250 ? ARG A 242 GLN A 250 H 1 LEU A 170 ? VAL A 172 ? LEU A 170 VAL A 172 H 2 GLY A 256 ? TYR A 260 ? GLY A 256 TYR A 260 H 3 LYS A 209 ? ALA A 214 ? LYS A 209 ALA A 214 H 4 VAL A 217 ? VAL A 222 ? VAL A 217 VAL A 222 I 1 GLY A 298 ? LEU A 300 ? GLY A 298 LEU A 300 I 2 CYS A 292 ? HIS A 294 ? CYS A 292 HIS A 294 I 3 ALA A 314 ? GLY A 316 ? ALA A 314 GLY A 316 J 1 TYR A 306 ? TYR A 307 ? TYR A 306 TYR A 307 J 2 ILE A 320 ? TRP A 321 ? ILE A 320 TRP A 321 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA B 33 ? O ALA B 33 N SER B 26 ? N SER B 26 A 2 3 O GLY B 23 ? O GLY B 23 N GLY A 6 ? N GLY A 6 A 3 4 N ILE A 3 ? N ILE A 3 O PHE B 138 ? O PHE B 138 A 4 5 O GLU B 139 ? O GLU B 139 N VAL B 131 ? N VAL B 131 B 1 2 N VAL A 16 ? N VAL A 16 O VAL A 24 ? O VAL A 24 C 1 2 N ILE A 30 ? N ILE A 30 O LEU A 328 ? O LEU A 328 D 1 2 N ASN A 43 ? N ASN A 43 O ALA A 290 ? O ALA A 290 E 1 2 N ARG A 50 ? N ARG A 50 O ILE A 83 ? O ILE A 83 E 2 3 N SER A 82 ? N SER A 82 O LYS A 278 ? O LYS A 278 F 1 2 N ASN A 116 ? N ASN A 116 O SER A 274 ? O SER A 274 F 2 3 O ALA A 273 ? O ALA A 273 N ASP A 183 ? N ASP A 183 F 3 4 N GLY A 189 ? N GLY A 189 O LEU A 265 ? O LEU A 265 F 4 5 O LEU A 266 ? O LEU A 266 N ALA A 157 ? N ALA A 157 F 5 6 O VAL A 160 ? O VAL A 160 N ILE A 136 ? N ILE A 136 G 1 2 N ASN A 116 ? N ASN A 116 O SER A 274 ? O SER A 274 G 2 3 O ALA A 273 ? O ALA A 273 N ASP A 183 ? N ASP A 183 G 3 4 N TRP A 188 ? N TRP A 188 O ASP A 246 ? O ASP A 246 H 1 2 N LEU A 170 ? N LEU A 170 O TYR A 260 ? O TYR A 260 H 2 3 O ALA A 259 ? O ALA A 259 N THR A 211 ? N THR A 211 H 3 4 N PHE A 210 ? N PHE A 210 O TYR A 221 ? O TYR A 221 I 1 2 O LEU A 300 ? O LEU A 300 N CYS A 292 ? N CYS A 292 I 2 3 N LEU A 293 ? N LEU A 293 O ILE A 315 ? O ILE A 315 J 1 2 N TYR A 307 ? N TYR A 307 O ILE A 320 ? O ILE A 320 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O4 F NAG 1 ? ? O5 F NAG 2 ? ? 2.07 2 1 OE1 A GLN 268 ? ? N2 D NAG 1 ? ? 2.13 3 1 OG A SER 240 ? ? O9 G SIA 3 ? ? 2.15 4 1 O A GLY 51 ? ? NE2 A HIS 85 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 276 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 276 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 276 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.31 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.01 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 45 ? ? -54.43 -81.33 2 1 LEU A 53 ? ? -32.67 -36.62 3 1 LEU A 58 ? ? 44.93 -158.08 4 1 ASN A 59 ? ? -52.61 86.30 5 1 PRO A 77 ? ? -96.47 -133.81 6 1 CYS A 94 ? ? 60.81 -163.47 7 1 ASP A 100 ? ? -56.81 8.06 8 1 ARG A 112 ? ? -37.82 -37.72 9 1 SER A 120 ? ? 151.05 136.82 10 1 ALA A 121 ? ? -92.00 36.12 11 1 ARG A 122 ? ? 160.27 177.56 12 1 THR A 125 ? ? 67.79 112.02 13 1 ALA A 127 ? ? -39.84 -36.32 14 1 PRO A 131 ? ? -49.60 151.83 15 1 VAL A 137 ? ? -67.54 87.64 16 1 SER A 142 ? ? 80.43 -3.24 17 1 PRO A 144 ? ? -40.09 -178.10 18 1 ASN A 148 ? ? 76.10 67.66 19 1 PHE A 153 ? ? 10.85 101.16 20 1 ASN A 163 ? ? 73.89 76.51 21 1 PRO A 169 ? ? -35.23 127.68 22 1 ILE A 177 ? ? 80.24 -28.73 23 1 LYS A 180 ? ? 71.20 -150.18 24 1 ASP A 204 ? ? 176.47 138.64 25 1 ASP A 234 ? ? -147.89 -153.94 26 1 GLU A 235 ? ? -135.36 -79.31 27 1 LEU A 237 ? ? 81.04 5.14 28 1 PRO A 238 ? ? -67.31 56.82 29 1 GLN A 261 ? ? -136.21 -97.10 30 1 VAL A 264 ? ? -42.86 98.53 31 1 GLN A 268 ? ? -140.70 -97.94 32 1 LYS A 281 ? ? -62.60 98.24 33 1 LEU A 286 ? ? -57.85 109.39 34 1 LYS A 296 ? ? -80.15 -114.88 35 1 TYR A 297 ? ? -8.09 -30.42 36 1 SER A 303 ? ? -93.84 -70.95 37 1 LEU B 38 ? ? -84.83 49.89 38 1 LYS B 39 ? ? -149.16 -52.78 39 1 LEU B 63 ? ? 83.21 87.58 40 1 GLN B 64 ? ? -119.08 -156.19 41 1 HIS B 74 ? ? -116.07 53.46 42 1 GLU B 111 ? ? -25.91 -70.64 43 1 SER B 163 ? ? -50.50 94.15 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU A 284 ? ? PRO A 285 ? ? 132.95 2 1 ALA A 338 ? ? LYS A 339 ? ? 145.99 # _pdbx_molecule_features.prd_id PRD_900046 _pdbx_molecule_features.name "6'-sialyl-N-acetyllactosamine" _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Glycan component' _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900046 _pdbx_molecule.asym_id G # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 25 A ASN 25 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 145 A ASN 145 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 301 A ASN 301 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 330 A ASN 330 ? ASN 'GLYCOSYLATION SITE' 5 B ASN 145 B ASN 145 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 343 ? A GLU 343 2 1 Y 1 A ARG 344 ? A ARG 344 3 1 Y 1 B LEU 170 ? B LEU 170 4 1 Y 1 B ASN 171 ? B ASN 171 5 1 Y 1 B ILE 172 ? B ILE 172 6 1 Y 1 B THR 173 ? B THR 173 7 1 Y 1 B ALA 174 ? B ALA 174 8 1 Y 1 B ALA 175 ? B ALA 175 9 1 Y 1 B SER 176 ? B SER 176 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GAL C1 C N R 88 GAL C2 C N R 89 GAL C3 C N S 90 GAL C4 C N R 91 GAL C5 C N R 92 GAL C6 C N N 93 GAL O1 O N N 94 GAL O2 O N N 95 GAL O3 O N N 96 GAL O4 O N N 97 GAL O5 O N N 98 GAL O6 O N N 99 GAL H1 H N N 100 GAL H2 H N N 101 GAL H3 H N N 102 GAL H4 H N N 103 GAL H5 H N N 104 GAL H61 H N N 105 GAL H62 H N N 106 GAL HO1 H N N 107 GAL HO2 H N N 108 GAL HO3 H N N 109 GAL HO4 H N N 110 GAL HO6 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 NAG C1 C N R 274 NAG C2 C N R 275 NAG C3 C N R 276 NAG C4 C N S 277 NAG C5 C N R 278 NAG C6 C N N 279 NAG C7 C N N 280 NAG C8 C N N 281 NAG N2 N N N 282 NAG O1 O N N 283 NAG O3 O N N 284 NAG O4 O N N 285 NAG O5 O N N 286 NAG O6 O N N 287 NAG O7 O N N 288 NAG H1 H N N 289 NAG H2 H N N 290 NAG H3 H N N 291 NAG H4 H N N 292 NAG H5 H N N 293 NAG H61 H N N 294 NAG H62 H N N 295 NAG H81 H N N 296 NAG H82 H N N 297 NAG H83 H N N 298 NAG HN2 H N N 299 NAG HO1 H N N 300 NAG HO3 H N N 301 NAG HO4 H N N 302 NAG HO6 H N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 SIA C1 C N N 358 SIA C2 C N R 359 SIA C3 C N N 360 SIA C4 C N S 361 SIA C5 C N R 362 SIA C6 C N R 363 SIA C7 C N R 364 SIA C8 C N R 365 SIA C9 C N N 366 SIA C10 C N N 367 SIA C11 C N N 368 SIA N5 N N N 369 SIA O1A O N N 370 SIA O1B O N N 371 SIA O2 O N N 372 SIA O4 O N N 373 SIA O6 O N N 374 SIA O7 O N N 375 SIA O8 O N N 376 SIA O9 O N N 377 SIA O10 O N N 378 SIA H32 H N N 379 SIA H31 H N N 380 SIA H4 H N N 381 SIA H5 H N N 382 SIA H6 H N N 383 SIA H7 H N N 384 SIA H8 H N N 385 SIA H92 H N N 386 SIA H91 H N N 387 SIA H111 H N N 388 SIA H113 H N N 389 SIA H112 H N N 390 SIA HN5 H N N 391 SIA HO1B H N N 392 SIA HO2 H N N 393 SIA HO4 H N N 394 SIA HO7 H N N 395 SIA HO8 H N N 396 SIA HO9 H N N 397 THR N N N N 398 THR CA C N S 399 THR C C N N 400 THR O O N N 401 THR CB C N R 402 THR OG1 O N N 403 THR CG2 C N N 404 THR OXT O N N 405 THR H H N N 406 THR H2 H N N 407 THR HA H N N 408 THR HB H N N 409 THR HG1 H N N 410 THR HG21 H N N 411 THR HG22 H N N 412 THR HG23 H N N 413 THR HXT H N N 414 TRP N N N N 415 TRP CA C N S 416 TRP C C N N 417 TRP O O N N 418 TRP CB C N N 419 TRP CG C Y N 420 TRP CD1 C Y N 421 TRP CD2 C Y N 422 TRP NE1 N Y N 423 TRP CE2 C Y N 424 TRP CE3 C Y N 425 TRP CZ2 C Y N 426 TRP CZ3 C Y N 427 TRP CH2 C Y N 428 TRP OXT O N N 429 TRP H H N N 430 TRP H2 H N N 431 TRP HA H N N 432 TRP HB2 H N N 433 TRP HB3 H N N 434 TRP HD1 H N N 435 TRP HE1 H N N 436 TRP HE3 H N N 437 TRP HZ2 H N N 438 TRP HZ3 H N N 439 TRP HH2 H N N 440 TRP HXT H N N 441 TYR N N N N 442 TYR CA C N S 443 TYR C C N N 444 TYR O O N N 445 TYR CB C N N 446 TYR CG C Y N 447 TYR CD1 C Y N 448 TYR CD2 C Y N 449 TYR CE1 C Y N 450 TYR CE2 C Y N 451 TYR CZ C Y N 452 TYR OH O N N 453 TYR OXT O N N 454 TYR H H N N 455 TYR H2 H N N 456 TYR HA H N N 457 TYR HB2 H N N 458 TYR HB3 H N N 459 TYR HD1 H N N 460 TYR HD2 H N N 461 TYR HE1 H N N 462 TYR HE2 H N N 463 TYR HH H N N 464 TYR HXT H N N 465 VAL N N N N 466 VAL CA C N S 467 VAL C C N N 468 VAL O O N N 469 VAL CB C N N 470 VAL CG1 C N N 471 VAL CG2 C N N 472 VAL OXT O N N 473 VAL H H N N 474 VAL H2 H N N 475 VAL HA H N N 476 VAL HB H N N 477 VAL HG11 H N N 478 VAL HG12 H N N 479 VAL HG13 H N N 480 VAL HG21 H N N 481 VAL HG22 H N N 482 VAL HG23 H N N 483 VAL HXT H N N 484 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GAL C1 C2 sing N N 83 GAL C1 O1 sing N N 84 GAL C1 O5 sing N N 85 GAL C1 H1 sing N N 86 GAL C2 C3 sing N N 87 GAL C2 O2 sing N N 88 GAL C2 H2 sing N N 89 GAL C3 C4 sing N N 90 GAL C3 O3 sing N N 91 GAL C3 H3 sing N N 92 GAL C4 C5 sing N N 93 GAL C4 O4 sing N N 94 GAL C4 H4 sing N N 95 GAL C5 C6 sing N N 96 GAL C5 O5 sing N N 97 GAL C5 H5 sing N N 98 GAL C6 O6 sing N N 99 GAL C6 H61 sing N N 100 GAL C6 H62 sing N N 101 GAL O1 HO1 sing N N 102 GAL O2 HO2 sing N N 103 GAL O3 HO3 sing N N 104 GAL O4 HO4 sing N N 105 GAL O6 HO6 sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 NAG C1 C2 sing N N 261 NAG C1 O1 sing N N 262 NAG C1 O5 sing N N 263 NAG C1 H1 sing N N 264 NAG C2 C3 sing N N 265 NAG C2 N2 sing N N 266 NAG C2 H2 sing N N 267 NAG C3 C4 sing N N 268 NAG C3 O3 sing N N 269 NAG C3 H3 sing N N 270 NAG C4 C5 sing N N 271 NAG C4 O4 sing N N 272 NAG C4 H4 sing N N 273 NAG C5 C6 sing N N 274 NAG C5 O5 sing N N 275 NAG C5 H5 sing N N 276 NAG C6 O6 sing N N 277 NAG C6 H61 sing N N 278 NAG C6 H62 sing N N 279 NAG C7 C8 sing N N 280 NAG C7 N2 sing N N 281 NAG C7 O7 doub N N 282 NAG C8 H81 sing N N 283 NAG C8 H82 sing N N 284 NAG C8 H83 sing N N 285 NAG N2 HN2 sing N N 286 NAG O1 HO1 sing N N 287 NAG O3 HO3 sing N N 288 NAG O4 HO4 sing N N 289 NAG O6 HO6 sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 SIA C1 C2 sing N N 344 SIA C1 O1A doub N N 345 SIA C1 O1B sing N N 346 SIA C2 C3 sing N N 347 SIA C2 O2 sing N N 348 SIA C2 O6 sing N N 349 SIA C3 C4 sing N N 350 SIA C3 H32 sing N N 351 SIA C3 H31 sing N N 352 SIA C4 C5 sing N N 353 SIA C4 O4 sing N N 354 SIA C4 H4 sing N N 355 SIA C5 C6 sing N N 356 SIA C5 N5 sing N N 357 SIA C5 H5 sing N N 358 SIA C6 C7 sing N N 359 SIA C6 O6 sing N N 360 SIA C6 H6 sing N N 361 SIA C7 C8 sing N N 362 SIA C7 O7 sing N N 363 SIA C7 H7 sing N N 364 SIA C8 C9 sing N N 365 SIA C8 O8 sing N N 366 SIA C8 H8 sing N N 367 SIA C9 O9 sing N N 368 SIA C9 H92 sing N N 369 SIA C9 H91 sing N N 370 SIA C10 C11 sing N N 371 SIA C10 N5 sing N N 372 SIA C10 O10 doub N N 373 SIA C11 H111 sing N N 374 SIA C11 H113 sing N N 375 SIA C11 H112 sing N N 376 SIA N5 HN5 sing N N 377 SIA O1B HO1B sing N N 378 SIA O2 HO2 sing N N 379 SIA O4 HO4 sing N N 380 SIA O7 HO7 sing N N 381 SIA O8 HO8 sing N N 382 SIA O9 HO9 sing N N 383 THR N CA sing N N 384 THR N H sing N N 385 THR N H2 sing N N 386 THR CA C sing N N 387 THR CA CB sing N N 388 THR CA HA sing N N 389 THR C O doub N N 390 THR C OXT sing N N 391 THR CB OG1 sing N N 392 THR CB CG2 sing N N 393 THR CB HB sing N N 394 THR OG1 HG1 sing N N 395 THR CG2 HG21 sing N N 396 THR CG2 HG22 sing N N 397 THR CG2 HG23 sing N N 398 THR OXT HXT sing N N 399 TRP N CA sing N N 400 TRP N H sing N N 401 TRP N H2 sing N N 402 TRP CA C sing N N 403 TRP CA CB sing N N 404 TRP CA HA sing N N 405 TRP C O doub N N 406 TRP C OXT sing N N 407 TRP CB CG sing N N 408 TRP CB HB2 sing N N 409 TRP CB HB3 sing N N 410 TRP CG CD1 doub Y N 411 TRP CG CD2 sing Y N 412 TRP CD1 NE1 sing Y N 413 TRP CD1 HD1 sing N N 414 TRP CD2 CE2 doub Y N 415 TRP CD2 CE3 sing Y N 416 TRP NE1 CE2 sing Y N 417 TRP NE1 HE1 sing N N 418 TRP CE2 CZ2 sing Y N 419 TRP CE3 CZ3 doub Y N 420 TRP CE3 HE3 sing N N 421 TRP CZ2 CH2 doub Y N 422 TRP CZ2 HZ2 sing N N 423 TRP CZ3 CH2 sing Y N 424 TRP CZ3 HZ3 sing N N 425 TRP CH2 HH2 sing N N 426 TRP OXT HXT sing N N 427 TYR N CA sing N N 428 TYR N H sing N N 429 TYR N H2 sing N N 430 TYR CA C sing N N 431 TYR CA CB sing N N 432 TYR CA HA sing N N 433 TYR C O doub N N 434 TYR C OXT sing N N 435 TYR CB CG sing N N 436 TYR CB HB2 sing N N 437 TYR CB HB3 sing N N 438 TYR CG CD1 doub Y N 439 TYR CG CD2 sing Y N 440 TYR CD1 CE1 sing Y N 441 TYR CD1 HD1 sing N N 442 TYR CD2 CE2 doub Y N 443 TYR CD2 HD2 sing N N 444 TYR CE1 CZ doub Y N 445 TYR CE1 HE1 sing N N 446 TYR CE2 CZ sing Y N 447 TYR CE2 HE2 sing N N 448 TYR CZ OH sing N N 449 TYR OH HH sing N N 450 TYR OXT HXT sing N N 451 VAL N CA sing N N 452 VAL N H sing N N 453 VAL N H2 sing N N 454 VAL CA C sing N N 455 VAL CA CB sing N N 456 VAL CA HA sing N N 457 VAL C O doub N N 458 VAL C OXT sing N N 459 VAL CB CG1 sing N N 460 VAL CB CG2 sing N N 461 VAL CB HB sing N N 462 VAL CG1 HG11 sing N N 463 VAL CG1 HG12 sing N N 464 VAL CG1 HG13 sing N N 465 VAL CG2 HG21 sing N N 466 VAL CG2 HG22 sing N N 467 VAL CG2 HG23 sing N N 468 VAL OXT HXT sing N N 469 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 4 NAG 1 n 4 GAL 2 n 4 SIA 3 n # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Unliganded influenza B virus hemagglutinin' # _atom_sites.entry_id 2RFU _atom_sites.fract_transf_matrix[1][1] 0.010166 _atom_sites.fract_transf_matrix[1][2] 0.005869 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011738 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007359 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_