HEADER HYDROLASE, TOXIN 03-OCT-07 2RG9 TITLE CRYSTAL STRUCTURE OF VISCUM ALBUM MISTLETOE LECTIN I IN NATIVE STATE TITLE 2 AT 1.95 A RESOLUTION, COMPARISON OF STRUCTURE ACTIVE SITE TITLE 3 CONFORMATION IN RICIN AND IN VISCUMIN CAVEAT 2RG9 GLU A 49 HAS WRONG CHIRALITY AT ATOM CA CYS B 5 HAS WRONG CAVEAT 2 2RG9 CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GALACTOSIDE-SPECIFIC LECTIN 1 CHAIN A ISOFORM 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-GALACTOSIDE-SPECIFIC LECTIN I CHAIN A ISOFORM 1, MLA, COMPND 5 ML-I A, RRNA N-GLYCOSIDASE; COMPND 6 EC: 3.2.2.22; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-GALACTOSIDE-SPECIFIC LECTIN 1 CHAIN B; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: BETA-GALACTOSIDE-SPECIFIC LECTIN I CHAIN B, MLB, ML-I B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VISCUM ALBUM; SOURCE 3 ORGANISM_COMMON: EUROPEAN MISTLETOE; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: VISCUM ALBUM; SOURCE 6 ORGANISM_COMMON: EUROPEAN MISTLETOE KEYWDS RIBOSOME-INACTIVATING PROTEIN TYPE II, GLYCOPROTEIN, HYDROLASE, KEYWDS 2 LECTIN, PLANT DEFENSE, PROTEIN SYNTHESIS INHIBITOR, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR N.U.KARPECHENKO,V.I.TIMOFEEV,A.G.GABDOULKHAKOV,A.M.MIKHAILOV REVDAT 5 20-NOV-24 2RG9 1 HETSYN SHEET REVDAT 4 29-JUL-20 2RG9 1 CAVEAT COMPND REMARK SEQADV REVDAT 4 2 1 HETNAM LINK SITE REVDAT 3 13-JUL-11 2RG9 1 VERSN REVDAT 2 24-FEB-09 2RG9 1 VERSN REVDAT 1 07-OCT-08 2RG9 0 JRNL AUTH N.U.KARPECHENKO,V.I.TIMOFEEV,A.G.GABDOULKHAKOV,A.M.MIKHAILOV JRNL TITL CRYSTAL STRUCTURE OF VISCUM ALBUM MISTLETOE LECTIN I IN JRNL TITL 2 NATIVE STATE AT 1.95 A RESOLUTION, COMPARISON OF STRUCTURE JRNL TITL 3 ACTIVE SITE CONFORMATION IN RICIN AND IN VISCUMIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 73865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000044822. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75021 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 92.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 207.30000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.65000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 155.47500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.82500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 259.12500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 207.30000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 103.65000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 51.82500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 155.47500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 259.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8210 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B3104 LIES ON A SPECIAL POSITION. REMARK 375 HOH B3188 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 ALA A 50 CB REMARK 470 GLU A 61 CG CD OE1 OE2 REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 THR A 102 OG1 CG2 REMARK 470 GLN A 137 CG CD OE1 NE2 REMARK 470 ARG A 219 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 156 CG OD1 ND2 REMARK 470 ILE B 167 CG1 CG2 CD1 REMARK 470 GLU B 222 CG CD OE1 OE2 REMARK 470 LYS B 242 CG CD CE NZ REMARK 470 ARG B 244 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 119 O2 SO4 A 4001 1.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 43 23.12 -71.84 REMARK 500 SER A 48 -154.82 -109.32 REMARK 500 GLU A 49 -162.48 152.63 REMARK 500 ALA A 50 41.82 146.20 REMARK 500 ILE A 163 -68.43 -120.93 REMARK 500 PRO A 224 11.81 -65.02 REMARK 500 VAL B 3 108.72 -37.06 REMARK 500 CYS B 5 -28.14 -142.78 REMARK 500 ALA B 7 -6.62 -143.93 REMARK 500 ASN B 43 -166.02 -128.48 REMARK 500 GLN B 238 59.73 -102.52 REMARK 500 ASN B 240 138.04 -176.34 REMARK 500 PRO B 241 4.72 -53.23 REMARK 500 ARG B 244 12.36 58.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 46 VAL A 47 -83.30 REMARK 500 VAL A 47 SER A 48 43.44 REMARK 500 SER A 48 GLU A 49 -39.47 REMARK 500 GLU A 49 ALA A 50 -104.67 REMARK 500 ALA A 50 SER A 51 -142.55 REMARK 500 SER A 51 ARG A 52 143.57 REMARK 500 VAL A 246 CYS A 247 -139.33 REMARK 500 GLY A 248 GLU A 249 -146.91 REMARK 500 ASP B 1 ASP B 2 142.06 REMARK 500 THR B 4 CYS B 5 -133.64 REMARK 500 GLN B 238 ALA B 239 146.47 REMARK 500 LYS B 242 LEU B 243 145.56 REMARK 500 ARG B 244 ARG B 245 149.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 5003 REMARK 610 NAG B 5002 REMARK 610 NAG B 5004 DBREF 2RG9 A 1 249 UNP P81446 ML1_VISAL 34 282 DBREF 2RG9 B 1 263 UNP P81446 ML1_VISAL 302 564 SEQADV 2RG9 SER A 5 UNP P81446 ARG 38 CONFLICT SEQADV 2RG9 THR A 8 UNP P81446 VAL 41 CONFLICT SEQADV 2RG9 VAL A 9 UNP P81446 THR 42 CONFLICT SEQADV 2RG9 GLN A 10 UNP P81446 HIS 43 CONFLICT SEQADV 2RG9 SER A 19 UNP P81446 ARG 52 CONFLICT SEQADV 2RG9 PHE A 27 UNP P81446 TYR 60 CONFLICT SEQADV 2RG9 ASN A 36 UNP P81446 GLU 69 CONFLICT SEQADV 2RG9 GLU A 49 UNP P81446 ASP 82 CONFLICT SEQADV 2RG9 SER A 51 UNP P81446 GLN 84 CONFLICT SEQADV 2RG9 GLN A 84 UNP P81446 ASP 117 CONFLICT SEQADV 2RG9 LYS A 90 UNP P81446 ARG 123 CONFLICT SEQADV 2RG9 GLN A 99 UNP P81446 HIS 132 CONFLICT SEQADV 2RG9 ASP A 100 UNP P81446 LEU 133 CONFLICT SEQADV 2RG9 HIS A 208 UNP P81446 GLN 241 CONFLICT SEQADV 2RG9 LEU A 222 UNP P81446 ILE 255 CONFLICT SEQADV 2RG9 VAL A 227 UNP P81446 PHE 260 CONFLICT SEQADV 2RG9 ILE A 233 UNP P81446 VAL 266 CONFLICT SEQADV 2RG9 ILE B 11 UNP P81446 THR 312 CONFLICT SEQADV 2RG9 THR B 21 UNP P81446 CYS 322 CONFLICT SEQADV 2RG9 GLN B 30 UNP P81446 HIS 331 CONFLICT SEQADV 2RG9 LYS B 54 UNP P81446 ARG 355 CONFLICT SEQADV 2RG9 ILE B 90 UNP P81446 LEU 391 CONFLICT SEQADV 2RG9 GLN B 92 UNP P81446 GLU 393 CONFLICT SEQADV 2RG9 THR B 166 UNP P81446 VAL 467 CONFLICT SEQADV 2RG9 GLY B 168 UNP P81446 SER 469 CONFLICT SEQADV 2RG9 GLU B 170 UNP P81446 GLN 471 CONFLICT SEQADV 2RG9 SER B 189 UNP P81446 ASP 490 CONFLICT SEQADV 2RG9 ASN B 194 UNP P81446 CYS 495 CONFLICT SEQADV 2RG9 ASN B 254 UNP P81446 LYS 555 CONFLICT SEQRES 1 A 249 TYR GLU ARG LEU SER LEU ARG THR VAL GLN GLN THR THR SEQRES 2 A 249 GLY GLU GLU TYR PHE SER PHE ILE THR LEU LEU ARG ASP SEQRES 3 A 249 PHE VAL SER SER GLY SER PHE SER ASN ASN ILE PRO LEU SEQRES 4 A 249 LEU ARG GLN SER THR ILE PRO VAL SER GLU ALA SER ARG SEQRES 5 A 249 PHE VAL LEU VAL GLU LEU THR ASN GLU GLY GLY ASP SER SEQRES 6 A 249 ILE THR ALA ALA ILE ASP VAL THR ASN LEU TYR VAL VAL SEQRES 7 A 249 ALA TYR GLN ALA GLY GLN GLN SER TYR PHE LEU LYS ASP SEQRES 8 A 249 ALA PRO ARG GLY ALA GLU THR GLN ASP PHE THR GLY THR SEQRES 9 A 249 THR ARG SER SER LEU PRO PHE ASN GLY SER TYR PRO ASP SEQRES 10 A 249 LEU GLU ARG TYR ALA GLY HIS ARG ASP GLN ILE PRO LEU SEQRES 11 A 249 GLY ILE ASP GLN LEU ILE GLN SER VAL THR ALA LEU ARG SEQRES 12 A 249 PHE PRO GLY GLY SER THR ARG THR GLN ALA ARG SER ILE SEQRES 13 A 249 LEU ILE LEU ILE GLN MET ILE SER GLU ALA ALA ARG PHE SEQRES 14 A 249 ASN PRO ILE LEU TRP ARG ALA ARG GLN TYR ILE ASN SER SEQRES 15 A 249 GLY ALA SER PHE LEU PRO ASP VAL TYR MET LEU GLU LEU SEQRES 16 A 249 GLU THR SER TRP GLY GLN GLN SER THR GLN VAL GLN HIS SEQRES 17 A 249 SER THR ASP GLY VAL PHE ASN ASN PRO ILE ARG LEU ALA SEQRES 18 A 249 LEU PRO PRO GLY ASN VAL VAL THR LEU THR ASN ILE ARG SEQRES 19 A 249 ASP VAL ILE ALA SER LEU ALA ILE MET LEU PHE VAL CYS SEQRES 20 A 249 GLY GLU SEQRES 1 B 263 ASP ASP VAL THR CYS SER ALA SER GLU PRO ILE VAL ARG SEQRES 2 B 263 ILE VAL GLY ARG ASN GLY MET THR VAL ASP VAL ARG ASP SEQRES 3 B 263 ASP ASP PHE GLN ASP GLY ASN GLN ILE GLN LEU TRP PRO SEQRES 4 B 263 SER LYS SER ASN ASN ASP PRO ASN GLN LEU TRP THR ILE SEQRES 5 B 263 LYS LYS ASP GLY THR ILE ARG SER ASN GLY SER CYS LEU SEQRES 6 B 263 THR THR TYR GLY TYR THR ALA GLY VAL TYR VAL MET ILE SEQRES 7 B 263 PHE ASP CYS ASN THR ALA VAL ARG GLU ALA THR ILE TRP SEQRES 8 B 263 GLN ILE TRP GLY ASN GLY THR ILE ILE ASN PRO ARG SER SEQRES 9 B 263 ASN LEU VAL LEU ALA ALA SER SER GLY ILE LYS GLY THR SEQRES 10 B 263 THR LEU THR VAL GLN THR LEU ASP TYR THR LEU GLY GLN SEQRES 11 B 263 GLY TRP LEU ALA GLY ASN ASP THR ALA PRO ARG GLU VAL SEQRES 12 B 263 THR ILE TYR GLY PHE ARG ASP LEU CYS MET GLU SER ASN SEQRES 13 B 263 GLY GLY SER VAL TRP VAL GLU THR CYS THR ILE GLY GLN SEQRES 14 B 263 GLU ASN GLN ARG TRP ALA LEU TYR GLY ASP GLY SER ILE SEQRES 15 B 263 ARG PRO LYS GLN ASN GLN SER GLN CYS LEU THR ASN GLY SEQRES 16 B 263 ARG ASP SER VAL SER THR VAL ILE ASN ILE VAL SER CYS SEQRES 17 B 263 SER ALA GLY SER SER GLY GLN ARG TRP VAL PHE THR ASN SEQRES 18 B 263 GLU GLY ALA ILE LEU ASN LEU LYS ASN GLY LEU ALA MET SEQRES 19 B 263 ASP VAL ALA GLN ALA ASN PRO LYS LEU ARG ARG ILE ILE SEQRES 20 B 263 ILE TYR PRO ALA THR GLY ASN PRO ASN GLN MET TRP LEU SEQRES 21 B 263 PRO VAL PRO MODRES 2RG9 ASN B 136 ASN GLYCOSYLATION SITE HET NAG A5003 14 HET SO4 A4001 5 HET AZI A4004 3 HET CL A4021 1 HET CL A4022 1 HET GOL A4007 6 HET GOL A4008 6 HET GOL A4009 6 HET GOL A4010 6 HET GOL A4011 6 HET GOL A4016 6 HET GOL A4019 6 HET GOL A4020 6 HET NAG B5001 14 HET NAG B5002 14 HET NAG B5004 14 HET AZI B4003 3 HET AZI B4005 3 HET GOL B4006 6 HET GOL B4012 6 HET GOL B4013 6 HET GOL B4014 6 HET GOL B4015 6 HET GOL B4017 6 HET GOL B4018 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM AZI AZIDE ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 4 SO4 O4 S 2- FORMUL 5 AZI 3(N3 1-) FORMUL 6 CL 2(CL 1-) FORMUL 8 GOL 15(C3 H8 O3) FORMUL 28 HOH *317(H2 O) HELIX 1 1 THR A 13 VAL A 28 1 16 HELIX 2 2 SER A 114 GLY A 123 1 10 HELIX 3 3 HIS A 124 ILE A 128 5 5 HELIX 4 4 GLY A 131 PHE A 144 1 14 HELIX 5 5 SER A 148 ILE A 163 1 16 HELIX 6 6 ILE A 163 PHE A 169 1 7 HELIX 7 7 PHE A 169 GLY A 183 1 15 HELIX 8 8 ASP A 189 SER A 209 1 21 HELIX 9 9 ARG A 234 VAL A 236 5 3 HELIX 10 10 GLY B 16 MET B 20 5 5 HELIX 11 11 ASP B 26 ASP B 28 5 3 HELIX 12 12 ASP B 45 LEU B 49 5 5 HELIX 13 13 VAL B 85 ILE B 90 5 6 HELIX 14 14 THR B 127 GLY B 131 5 5 HELIX 15 15 GLY B 147 ARG B 149 5 3 HELIX 16 16 GLN B 169 ASN B 171 5 3 HELIX 17 17 SER B 212 GLN B 215 5 4 HELIX 18 18 ASN B 254 MET B 258 5 5 SHEET 1 A 6 GLU A 2 THR A 8 0 SHEET 2 A 6 PHE A 53 ASN A 60 1 O GLU A 57 N LEU A 4 SHEET 3 A 6 SER A 65 ASP A 71 -1 O ILE A 70 N VAL A 54 SHEET 4 A 6 VAL A 77 ALA A 82 -1 O ALA A 79 N ALA A 69 SHEET 5 A 6 GLN A 85 PHE A 88 -1 O TYR A 87 N TYR A 80 SHEET 6 A 6 THR A 105 SER A 108 1 O THR A 105 N SER A 86 SHEET 1 B 2 SER A 29 SER A 34 0 SHEET 2 B 2 ILE A 37 LEU A 40 -1 O LEU A 39 N SER A 30 SHEET 1 C 2 VAL A 213 LEU A 222 0 SHEET 2 C 2 ASN A 226 ASN A 232 -1 O ASN A 226 N LEU A 222 SHEET 1 D 5 ILE B 11 VAL B 12 0 SHEET 2 D 5 TRP B 50 ILE B 52 -1 O TRP B 50 N VAL B 12 SHEET 3 D 5 ILE B 58 SER B 60 -1 O ARG B 59 N THR B 51 SHEET 4 D 5 SER B 63 THR B 67 -1 O LEU B 65 N ILE B 58 SHEET 5 D 5 VAL B 76 PHE B 79 -1 O MET B 77 N THR B 66 SHEET 1 E 2 ILE B 14 VAL B 15 0 SHEET 2 E 2 LEU B 133 ALA B 134 -1 O LEU B 133 N VAL B 15 SHEET 1 F 2 THR B 21 VAL B 24 0 SHEET 2 F 2 ILE B 35 TRP B 38 -1 O TRP B 38 N THR B 21 SHEET 1 G 4 GLN B 92 ILE B 93 0 SHEET 2 G 4 ILE B 99 ASN B 101 -1 O ILE B 100 N GLN B 92 SHEET 3 G 4 LEU B 106 ALA B 109 -1 O LEU B 106 N ASN B 101 SHEET 4 G 4 THR B 120 GLN B 122 -1 O GLN B 122 N VAL B 107 SHEET 1 H 4 ILE B 182 PRO B 184 0 SHEET 2 H 4 ARG B 173 LEU B 176 -1 N ALA B 175 O ARG B 183 SHEET 3 H 4 ARG B 141 TYR B 146 -1 N ARG B 141 O LEU B 176 SHEET 4 H 4 LEU B 260 VAL B 262 -1 O LEU B 260 N TYR B 146 SHEET 1 I 1 SER B 159 THR B 164 0 SHEET 1 J 2 GLN B 190 THR B 193 0 SHEET 2 J 2 ASN B 204 SER B 207 -1 O ASN B 204 N THR B 193 SHEET 1 K 2 TRP B 217 PHE B 219 0 SHEET 2 K 2 ILE B 225 ASN B 227 -1 O LEU B 226 N VAL B 218 SHEET 1 L 2 ALA B 233 VAL B 236 0 SHEET 2 L 2 ILE B 246 TYR B 249 -1 O TYR B 249 N ALA B 233 SSBOND 1 CYS B 64 CYS B 81 1555 1555 2.05 SSBOND 2 CYS B 152 CYS B 165 1555 1555 2.04 SSBOND 3 CYS B 191 CYS B 208 1555 1555 2.03 LINK ND2 ASN B 136 C1 NAG B5001 1555 1555 1.66 CRYST1 106.950 106.950 310.950 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009350 0.005398 0.000000 0.00000 SCALE2 0.000000 0.010797 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003216 0.00000