data_2RM8 # _entry.id 2RM8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RM8 pdb_00002rm8 10.2210/pdb2rm8/pdb RCSB RCSB150027 ? ? WWPDB D_1000150027 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RM8 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-10-15 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hayashi, K.' 1 'Sudo, Y.' 2 'Jee, J.' 3 'Mishima, M.' 4 'Hara, H.' 5 'Kamo, N.' 6 'Kojima, C.' 7 # _citation.id primary _citation.title 'Structural Analysis of the Phototactic Transducer Protein HtrII Linker Region from Natronomonas pharaonis' _citation.journal_abbrev Biochemistry _citation.journal_volume 46 _citation.page_first 14380 _citation.page_last 14390 _citation.year 2007 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18001143 _citation.pdbx_database_id_DOI 10.1021/bi701837n # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hayashi, K.' 1 ? primary 'Sudo, Y.' 2 ? primary 'Jee, J.' 3 ? primary 'Mishima, M.' 4 ? primary 'Hara, H.' 5 ? primary 'Kamo, N.' 6 ? primary 'Kojima, C.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Sensory rhodopsin II transducer' _entity.formula_weight 7953.507 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Residues UNP 100-159' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HTR-II, Methyl-accepting phototaxis protein II, MPP-II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MGDGDLDVELETRREDEIGDLYAAFDEMRQSVRTSLEDAKNAREDAEQAQKRAEEINTELLEHHHHHH _entity_poly.pdbx_seq_one_letter_code_can MGDGDLDVELETRREDEIGDLYAAFDEMRQSVRTSLEDAKNAREDAEQAQKRAEEINTELLEHHHHHH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 ASP n 1 4 GLY n 1 5 ASP n 1 6 LEU n 1 7 ASP n 1 8 VAL n 1 9 GLU n 1 10 LEU n 1 11 GLU n 1 12 THR n 1 13 ARG n 1 14 ARG n 1 15 GLU n 1 16 ASP n 1 17 GLU n 1 18 ILE n 1 19 GLY n 1 20 ASP n 1 21 LEU n 1 22 TYR n 1 23 ALA n 1 24 ALA n 1 25 PHE n 1 26 ASP n 1 27 GLU n 1 28 MET n 1 29 ARG n 1 30 GLN n 1 31 SER n 1 32 VAL n 1 33 ARG n 1 34 THR n 1 35 SER n 1 36 LEU n 1 37 GLU n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 ASN n 1 42 ALA n 1 43 ARG n 1 44 GLU n 1 45 ASP n 1 46 ALA n 1 47 GLU n 1 48 GLN n 1 49 ALA n 1 50 GLN n 1 51 LYS n 1 52 ARG n 1 53 ALA n 1 54 GLU n 1 55 GLU n 1 56 ILE n 1 57 ASN n 1 58 THR n 1 59 GLU n 1 60 LEU n 1 61 LEU n 1 62 GLU n 1 63 HIS n 1 64 HIS n 1 65 HIS n 1 66 HIS n 1 67 HIS n 1 68 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Natronomonas _entity_src_gen.pdbx_gene_src_gene htrII _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Natronomonas pharaonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2257 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Star(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET21 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details 'pHtrII(1-159) was expressed, and pHtrII(100-159) was obtained by trypsin digestion.' _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HTR2_NATPH _struct_ref.pdbx_db_accession P42259 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MGDGDLDVELETRREDEIGDLYAAFDEMRQSVRTSLEDAKNAREDAEQAQKRAEEINTEL _struct_ref.pdbx_align_begin 100 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RM8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 60 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42259 _struct_ref_seq.db_align_beg 100 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 159 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 100 _struct_ref_seq.pdbx_auth_seq_align_end 159 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2RM8 LEU A 61 ? UNP P42259 ? ? 'expression tag' 160 1 1 2RM8 GLU A 62 ? UNP P42259 ? ? 'expression tag' 161 2 1 2RM8 HIS A 63 ? UNP P42259 ? ? 'expression tag' 162 3 1 2RM8 HIS A 64 ? UNP P42259 ? ? 'expression tag' 163 4 1 2RM8 HIS A 65 ? UNP P42259 ? ? 'expression tag' 164 5 1 2RM8 HIS A 66 ? UNP P42259 ? ? 'expression tag' 165 6 1 2RM8 HIS A 67 ? UNP P42259 ? ? 'expression tag' 166 7 1 2RM8 HIS A 68 ? UNP P42259 ? ? 'expression tag' 167 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D HNCACB' 1 3 1 '3D HNCA' 1 4 1 '3D HNCO' 1 5 1 '3D HN(COCA)CB' 1 6 1 '3D H(CCO)NH' 1 7 2 '3D 1H-15N NOESY' 1 8 2 '3D 1H-15N TOCSY' 1 9 1 '3D H(CA)CONH' 1 10 1 '3D HCCH-TOCSY' 1 11 2 '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.05 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 277 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.6-0.8mM [U-100% 13C; U-100% 15N] pHtrII(100-159), 10mM citric acid, 50mM potassium chloride, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.6-0.8mM [U-15N] pHtrII(100-159), 10mM citric acid, 50mM potassium chloride, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2RM8 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RM8 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2RM8 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'chemical shift assignment' CYANA 2.1 1 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 2 'Cornilescu, Delaglio and Bax' 'collection of dihedral angles' TALOS ? 3 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Koll' refinement Amber 9.0 4 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRDraw ? 5 Goddard 'peak picking' Sparky ? 6 Goddard 'chemical shift assignment' Sparky ? 7 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RM8 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RM8 _struct.title 'The solution structure of phototactic transducer protein HtrII linker region from Natronomonas pharaonis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RM8 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;PROTEIN, Chemotaxis, Chromophore, Membrane, Methylation, Photoreceptor protein, Receptor, Sensory transduction, Transducer, Transmembrane, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LEU _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 36 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 51 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LEU _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 135 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 150 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2RM8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 100 100 MET MET A . n A 1 2 GLY 2 101 101 GLY GLY A . n A 1 3 ASP 3 102 102 ASP ASP A . n A 1 4 GLY 4 103 103 GLY GLY A . n A 1 5 ASP 5 104 104 ASP ASP A . n A 1 6 LEU 6 105 105 LEU LEU A . n A 1 7 ASP 7 106 106 ASP ASP A . n A 1 8 VAL 8 107 107 VAL VAL A . n A 1 9 GLU 9 108 108 GLU GLU A . n A 1 10 LEU 10 109 109 LEU LEU A . n A 1 11 GLU 11 110 110 GLU GLU A . n A 1 12 THR 12 111 111 THR THR A . n A 1 13 ARG 13 112 112 ARG ARG A . n A 1 14 ARG 14 113 113 ARG ARG A . n A 1 15 GLU 15 114 114 GLU GLU A . n A 1 16 ASP 16 115 115 ASP ASP A . n A 1 17 GLU 17 116 116 GLU GLU A . n A 1 18 ILE 18 117 117 ILE ILE A . n A 1 19 GLY 19 118 118 GLY GLY A . n A 1 20 ASP 20 119 119 ASP ASP A . n A 1 21 LEU 21 120 120 LEU LEU A . n A 1 22 TYR 22 121 121 TYR TYR A . n A 1 23 ALA 23 122 122 ALA ALA A . n A 1 24 ALA 24 123 123 ALA ALA A . n A 1 25 PHE 25 124 124 PHE PHE A . n A 1 26 ASP 26 125 125 ASP ASP A . n A 1 27 GLU 27 126 126 GLU GLU A . n A 1 28 MET 28 127 127 MET MET A . n A 1 29 ARG 29 128 128 ARG ARG A . n A 1 30 GLN 30 129 129 GLN GLN A . n A 1 31 SER 31 130 130 SER SER A . n A 1 32 VAL 32 131 131 VAL VAL A . n A 1 33 ARG 33 132 132 ARG ARG A . n A 1 34 THR 34 133 133 THR THR A . n A 1 35 SER 35 134 134 SER SER A . n A 1 36 LEU 36 135 135 LEU LEU A . n A 1 37 GLU 37 136 136 GLU GLU A . n A 1 38 ASP 38 137 137 ASP ASP A . n A 1 39 ALA 39 138 138 ALA ALA A . n A 1 40 LYS 40 139 139 LYS LYS A . n A 1 41 ASN 41 140 140 ASN ASN A . n A 1 42 ALA 42 141 141 ALA ALA A . n A 1 43 ARG 43 142 142 ARG ARG A . n A 1 44 GLU 44 143 143 GLU GLU A . n A 1 45 ASP 45 144 144 ASP ASP A . n A 1 46 ALA 46 145 145 ALA ALA A . n A 1 47 GLU 47 146 146 GLU GLU A . n A 1 48 GLN 48 147 147 GLN GLN A . n A 1 49 ALA 49 148 148 ALA ALA A . n A 1 50 GLN 50 149 149 GLN GLN A . n A 1 51 LYS 51 150 150 LYS LYS A . n A 1 52 ARG 52 151 151 ARG ARG A . n A 1 53 ALA 53 152 152 ALA ALA A . n A 1 54 GLU 54 153 153 GLU GLU A . n A 1 55 GLU 55 154 154 GLU GLU A . n A 1 56 ILE 56 155 155 ILE ILE A . n A 1 57 ASN 57 156 156 ASN ASN A . n A 1 58 THR 58 157 157 THR THR A . n A 1 59 GLU 59 158 158 GLU GLU A . n A 1 60 LEU 60 159 159 LEU LEU A . n A 1 61 LEU 61 160 160 LEU LEU A . n A 1 62 GLU 62 161 161 GLU GLU A . n A 1 63 HIS 63 162 162 HIS HIS A . n A 1 64 HIS 64 163 163 HIS HIS A . n A 1 65 HIS 65 164 164 HIS HIS A . n A 1 66 HIS 66 165 165 HIS HIS A . n A 1 67 HIS 67 166 166 HIS HIS A . n A 1 68 HIS 68 167 167 HIS HIS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'pHtrII(100-159)' 0.6 mM '[U-100% 13C; U-100% 15N]' 1 'citric acid' 10 mM ? 1 'potassium chloride' 50 mM ? 1 D2O 10 % '[U-2H]' 1 'pHtrII(100-159)' 0.6 mM '[U-15N]' 2 'citric acid' 10 mM ? 2 'potassium chloride' 50 mM ? 2 D2O 10 % '[U-2H]' 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2RM8 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 9 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 480 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 209 _pdbx_nmr_constraints.NOE_long_range_total_count 0 _pdbx_nmr_constraints.NOE_medium_range_total_count 74 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 197 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 22 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 22 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 3 NE A ARG 113 ? ? CZ A ARG 113 ? ? NH1 A ARG 113 ? ? 123.50 120.30 3.20 0.50 N 2 4 NE A ARG 128 ? ? CZ A ARG 128 ? ? NH1 A ARG 128 ? ? 123.37 120.30 3.07 0.50 N 3 8 NE A ARG 151 ? ? CZ A ARG 151 ? ? NH1 A ARG 151 ? ? 123.62 120.30 3.32 0.50 N 4 17 NE A ARG 112 ? ? CZ A ARG 112 ? ? NH1 A ARG 112 ? ? 123.99 120.30 3.69 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 105 ? ? -160.12 -137.80 2 1 VAL A 107 ? ? -63.54 6.70 3 1 LEU A 109 ? ? -155.38 -31.24 4 1 GLU A 110 ? ? 76.50 112.53 5 1 THR A 111 ? ? 70.63 -20.06 6 1 ALA A 122 ? ? -155.87 -155.63 7 1 PHE A 124 ? ? -84.89 36.39 8 1 ASP A 125 ? ? -145.40 -48.86 9 1 SER A 134 ? ? 178.65 -47.91 10 1 GLU A 154 ? ? 68.74 -65.55 11 1 ILE A 155 ? ? 59.62 4.99 12 1 GLU A 161 ? ? -122.16 -57.97 13 1 HIS A 166 ? ? -43.45 101.13 14 2 LEU A 105 ? ? -134.54 -46.92 15 2 ASP A 106 ? ? -143.36 13.68 16 2 LEU A 109 ? ? -163.27 -41.89 17 2 GLU A 110 ? ? 56.48 -25.58 18 2 THR A 111 ? ? -149.79 -119.68 19 2 ILE A 117 ? ? 54.55 10.69 20 2 ASP A 119 ? ? 69.27 -22.67 21 2 LEU A 120 ? ? -138.62 -88.50 22 2 ALA A 122 ? ? -151.11 25.46 23 2 PHE A 124 ? ? -143.34 10.20 24 2 VAL A 131 ? ? -83.22 30.01 25 2 GLU A 154 ? ? -168.28 -35.27 26 2 HIS A 166 ? ? 60.72 68.52 27 3 ASP A 102 ? ? -159.98 78.03 28 3 LEU A 109 ? ? -152.95 -38.25 29 3 THR A 111 ? ? 179.29 158.61 30 3 ARG A 113 ? ? -48.30 97.67 31 3 ASP A 115 ? ? -156.90 46.03 32 3 ALA A 122 ? ? -97.64 -140.06 33 3 PHE A 124 ? ? -163.49 -13.13 34 3 GLN A 129 ? ? -156.67 -1.54 35 3 GLU A 154 ? ? -77.47 44.86 36 3 ASN A 156 ? ? -162.70 -36.74 37 3 LEU A 159 ? ? -97.14 49.06 38 3 GLU A 161 ? ? -149.92 36.15 39 4 ASP A 102 ? ? -142.87 -15.90 40 4 ASP A 104 ? ? 69.98 134.47 41 4 ILE A 117 ? ? -131.63 -53.11 42 5 ASP A 102 ? ? -178.34 -49.91 43 5 LEU A 105 ? ? -145.26 -13.67 44 5 GLU A 110 ? ? 68.70 -176.62 45 5 ARG A 113 ? ? 86.26 150.98 46 5 ASP A 115 ? ? 63.85 -27.44 47 5 ALA A 122 ? ? -151.94 7.66 48 5 PHE A 124 ? ? -141.03 -1.56 49 5 HIS A 162 ? ? -144.31 32.39 50 6 ASP A 102 ? ? -141.26 -35.07 51 6 GLU A 110 ? ? 70.10 115.12 52 6 ASP A 115 ? ? -83.09 40.17 53 6 ASP A 119 ? ? 63.76 -0.43 54 6 ALA A 122 ? ? -161.81 -159.90 55 6 ASP A 125 ? ? -150.15 -49.99 56 6 GLN A 129 ? ? -145.50 -38.18 57 6 VAL A 131 ? ? -171.34 103.05 58 6 THR A 133 ? ? 158.59 94.40 59 6 SER A 134 ? ? -172.69 -52.84 60 6 GLU A 136 ? ? -132.59 -71.17 61 6 HIS A 165 ? ? -82.68 45.74 62 7 ASP A 106 ? ? -150.15 -34.89 63 7 GLU A 108 ? ? -166.91 -55.47 64 7 LEU A 109 ? ? -161.46 -5.05 65 7 ARG A 112 ? ? -141.13 -121.55 66 7 ARG A 113 ? ? 73.97 159.76 67 7 LEU A 120 ? ? 67.86 82.36 68 7 PHE A 124 ? ? -157.02 35.69 69 7 GLU A 153 ? ? 69.13 168.87 70 7 ILE A 155 ? ? -60.28 98.15 71 7 ASN A 156 ? ? 64.21 -1.98 72 7 HIS A 162 ? ? 68.69 125.88 73 8 GLU A 108 ? ? 177.90 -56.17 74 8 GLU A 110 ? ? 61.95 -122.48 75 8 ILE A 117 ? ? -139.76 -39.82 76 8 LEU A 120 ? ? -145.38 -56.87 77 8 GLU A 154 ? ? -150.63 17.54 78 8 HIS A 163 ? ? -79.60 38.76 79 8 HIS A 166 ? ? 57.48 1.31 80 9 VAL A 107 ? ? -69.02 7.12 81 9 LEU A 109 ? ? -164.56 -43.29 82 9 THR A 111 ? ? -161.69 111.87 83 9 ARG A 112 ? ? -164.22 30.78 84 9 GLU A 114 ? ? -174.85 144.43 85 9 ASP A 115 ? ? 66.71 -41.66 86 9 ASP A 119 ? ? 67.00 -66.38 87 9 ALA A 122 ? ? -153.14 -145.50 88 9 THR A 133 ? ? -132.20 -45.36 89 9 GLU A 153 ? ? 78.68 143.91 90 9 LEU A 159 ? ? -58.01 -7.96 91 9 GLU A 161 ? ? -157.19 9.08 92 9 HIS A 164 ? ? -162.38 -31.35 93 10 LEU A 105 ? ? -153.39 0.69 94 10 GLU A 108 ? ? -168.79 -58.77 95 10 LEU A 109 ? ? -146.40 -6.36 96 10 GLU A 110 ? ? 74.40 126.58 97 10 GLU A 114 ? ? -170.69 144.95 98 10 ASP A 115 ? ? -157.66 44.36 99 10 ASP A 119 ? ? 71.23 -35.32 100 10 PHE A 124 ? ? -142.97 10.65 101 10 ILE A 155 ? ? -160.93 -39.94 102 10 LEU A 159 ? ? -165.12 117.57 103 10 GLU A 161 ? ? 74.57 51.55 104 10 HIS A 166 ? ? -86.06 42.05 105 11 ASP A 102 ? ? 72.05 148.97 106 11 THR A 111 ? ? -159.85 -154.65 107 11 ARG A 113 ? ? -142.93 23.36 108 11 GLU A 114 ? ? 74.54 119.89 109 11 PHE A 124 ? ? -155.16 7.43 110 11 SER A 134 ? ? 74.13 -51.21 111 11 GLU A 154 ? ? -144.27 12.47 112 11 HIS A 163 ? ? -173.12 -102.47 113 12 VAL A 107 ? ? -69.87 2.34 114 12 GLU A 110 ? ? 62.99 -175.83 115 12 ARG A 112 ? ? -64.86 97.43 116 12 GLU A 114 ? ? -120.46 -51.68 117 12 ASP A 115 ? ? 52.18 18.35 118 12 ASP A 119 ? ? 68.59 -15.67 119 12 ASP A 125 ? ? -143.83 -30.42 120 12 GLU A 154 ? ? 68.52 -10.81 121 12 LEU A 159 ? ? -130.25 -53.32 122 12 GLU A 161 ? ? -161.15 41.75 123 13 LEU A 105 ? ? -160.39 -2.01 124 13 ASP A 115 ? ? 173.25 -27.76 125 13 ASP A 119 ? ? 69.15 -38.60 126 13 SER A 130 ? ? 66.16 -49.90 127 13 GLU A 153 ? ? 66.18 -27.34 128 13 GLU A 154 ? ? -164.90 -97.58 129 13 ILE A 155 ? ? 65.36 -54.47 130 13 LEU A 160 ? ? 72.13 147.87 131 13 GLU A 161 ? ? -146.99 -46.38 132 13 HIS A 163 ? ? -143.85 15.84 133 13 HIS A 165 ? ? 73.40 -34.15 134 14 LEU A 105 ? ? 70.39 -27.43 135 14 GLU A 108 ? ? -168.35 -56.93 136 14 GLU A 110 ? ? 67.72 109.70 137 14 ARG A 112 ? ? -69.56 4.21 138 14 ASP A 119 ? ? 63.23 -71.81 139 14 LEU A 120 ? ? -145.04 -0.63 140 14 ALA A 122 ? ? -156.71 -47.24 141 14 PHE A 124 ? ? 70.12 -24.19 142 14 LEU A 159 ? ? -165.64 112.18 143 14 GLU A 161 ? ? -152.32 20.76 144 15 ASP A 102 ? ? -167.73 -40.06 145 15 ASP A 106 ? ? -77.77 40.46 146 15 VAL A 107 ? ? -168.02 93.17 147 15 GLU A 108 ? ? -172.58 -58.04 148 15 GLU A 110 ? ? 57.08 -122.08 149 15 ARG A 112 ? ? 65.41 112.34 150 15 ASP A 115 ? ? -151.14 42.98 151 15 ASP A 119 ? ? 68.61 -23.18 152 15 ALA A 122 ? ? -84.73 37.01 153 15 SER A 134 ? ? 68.98 -41.54 154 15 LEU A 159 ? ? -90.78 50.11 155 15 GLU A 161 ? ? -160.94 67.23 156 15 HIS A 164 ? ? 60.74 -131.38 157 15 HIS A 165 ? ? 67.77 -61.55 158 15 HIS A 166 ? ? 45.88 29.37 159 16 GLU A 110 ? ? 54.81 12.95 160 16 ARG A 112 ? ? -155.76 27.20 161 16 ASP A 119 ? ? 68.22 -40.72 162 16 GLU A 154 ? ? -152.67 23.63 163 16 GLU A 161 ? ? -167.99 -50.36 164 16 HIS A 162 ? ? -158.39 -149.21 165 16 HIS A 163 ? ? 74.63 -44.42 166 16 HIS A 166 ? ? 59.54 10.50 167 17 ASP A 115 ? ? -160.82 51.03 168 17 SER A 134 ? ? -66.00 6.33 169 17 LEU A 160 ? ? -148.25 -142.72 170 17 HIS A 163 ? ? 68.42 161.96 171 17 HIS A 165 ? ? 70.35 -32.23 172 18 VAL A 107 ? ? -68.77 3.68 173 18 LEU A 109 ? ? -156.34 -21.66 174 18 GLU A 110 ? ? 64.22 -168.80 175 18 ASP A 115 ? ? -158.64 39.57 176 18 TYR A 121 ? ? -160.47 99.51 177 18 ALA A 122 ? ? -162.59 -149.33 178 18 PHE A 124 ? ? -157.00 -40.70 179 18 HIS A 162 ? ? -149.83 22.11 180 18 HIS A 163 ? ? 73.05 161.57 181 18 HIS A 164 ? ? -98.55 -89.67 182 18 HIS A 165 ? ? -159.30 46.45 183 19 LEU A 105 ? ? 68.99 -0.49 184 19 VAL A 107 ? ? -67.04 0.07 185 19 GLU A 110 ? ? 47.84 -113.40 186 19 TYR A 121 ? ? -155.24 50.74 187 19 PHE A 124 ? ? -156.73 14.48 188 19 GLN A 129 ? ? -161.24 -38.53 189 19 VAL A 131 ? ? -146.42 26.95 190 19 SER A 134 ? ? 81.54 -18.27 191 19 GLU A 153 ? ? 72.89 150.98 192 19 ILE A 155 ? ? -156.57 56.46 193 19 GLU A 161 ? ? -165.26 99.32 194 19 HIS A 162 ? ? -157.87 -90.79 195 19 HIS A 165 ? ? -164.61 41.44 196 20 GLU A 108 ? ? -167.93 -54.32 197 20 LEU A 109 ? ? -141.44 -8.71 198 20 ARG A 112 ? ? -59.43 -7.17 199 20 ASP A 115 ? ? -145.65 47.97 200 20 ASP A 119 ? ? 64.80 -76.88 201 20 LEU A 120 ? ? -140.08 18.29 202 20 TYR A 121 ? ? 76.28 150.27 203 20 ALA A 122 ? ? -154.50 27.38 204 20 PHE A 124 ? ? 68.17 -8.51 205 20 ALA A 152 ? ? -54.47 -0.95 206 20 GLU A 153 ? ? 72.44 -80.00 207 20 GLU A 154 ? ? 64.77 -43.17 208 20 GLU A 161 ? ? -146.77 -10.59 209 20 HIS A 164 ? ? -151.78 -21.71 210 20 HIS A 165 ? ? 66.98 -6.58 #