data_2RMQ # _entry.id 2RMQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RMQ pdb_00002rmq 10.2210/pdb2rmq/pdb RCSB RCSB150041 ? ? WWPDB D_1000150041 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 4 'Structure model' 1 3 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_conn 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RMQ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-11-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Matsugami, A.' 1 'Ohyama, T.' 2 'Inada, M.' 3 'Katahira, M.' 4 # _citation.id primary _citation.title ;Unexpected A-form formation of 4'-thioDNA in solution, revealed by NMR, and the implications as to the mechanism of nuclease resistance ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 36 _citation.page_first 1805 _citation.page_last 1812 _citation.year 2008 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18252770 _citation.pdbx_database_id_DOI 10.1093/nar/gkn011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Matsugami, A.' 1 ? primary 'Ohyama, T.' 2 ? primary 'Inada, M.' 3 ? primary 'Inoue, N.' 4 ? primary 'Minakawa, N.' 5 ? primary 'Matsuda, A.' 6 ? primary 'Katahira, M.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*(C4S)P*(S4G)P*(C4S)P*(S4G)P*(S4A)P*(S4A)P*(T49)P*(T49)P*(C4S)P*(S4G)P*(C4S)P*(S4G))-3') ; _entity.formula_weight 3856.182 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details "4'-thio-DNA" # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(C4S)(S4G)(C4S)(S4G)(S4A)(S4A)(T49)(T49)(C4S)(S4G)(C4S)(S4G)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C4S n 1 2 S4G n 1 3 C4S n 1 4 S4G n 1 5 S4A n 1 6 S4A n 1 7 T49 n 1 8 T49 n 1 9 C4S n 1 10 S4G n 1 11 C4S n 1 12 S4G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'chemically synthesized' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C4S 'DNA linking' n ;2'-deoxy-4'-thiocytidine 5'-(dihydrogen phosphate) ; ? 'C9 H14 N3 O6 P S' 323.263 S4A 'DNA linking' n ;2'-deoxy-4'-thioadenosine 5'-(dihydrogen phosphate) ; ? 'C10 H14 N5 O5 P S' 347.287 S4G 'DNA linking' n ;2'-deoxy-4'-thioguanosine 5'-(dihydrogen phosphate) ; ? 'C10 H14 N5 O6 P S' 363.287 T49 'DNA linking' n ;S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O7 P S' 338.274 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C4S 1 1 1 C4S C4S A . n A 1 2 S4G 2 2 2 S4G S4G A . n A 1 3 C4S 3 3 3 C4S C4S A . n A 1 4 S4G 4 4 4 S4G S4G A . n A 1 5 S4A 5 5 5 S4A S4A A . n A 1 6 S4A 6 6 6 S4A S4A A . n A 1 7 T49 7 7 7 T49 T49 A . n A 1 8 T49 8 8 8 T49 T49 A . n A 1 9 C4S 9 9 9 C4S C4S A . n A 1 10 S4G 10 10 10 S4G S4G A . n A 1 11 C4S 11 11 11 C4S C4S A . n A 1 12 S4G 12 12 12 S4G S4G A . n B 1 1 C4S 1 13 13 C4S C4S B . n B 1 2 S4G 2 14 14 S4G S4G B . n B 1 3 C4S 3 15 15 C4S C4S B . n B 1 4 S4G 4 16 16 S4G S4G B . n B 1 5 S4A 5 17 17 S4A S4A B . n B 1 6 S4A 6 18 18 S4A S4A B . n B 1 7 T49 7 19 19 T49 T49 B . n B 1 8 T49 8 20 20 T49 T49 B . n B 1 9 C4S 9 21 21 C4S C4S B . n B 1 10 S4G 10 22 22 S4G S4G B . n B 1 11 C4S 11 23 23 C4S C4S B . n B 1 12 S4G 12 24 24 S4G S4G B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RMQ _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RMQ _struct.title ;Solution structure of fully modified 4'-thioDNA with the sequence of d(CGCGAATTCGCG) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RMQ _struct_keywords.pdbx_keywords DNA _struct_keywords.text ;4'-thioDNA, A-form, DNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # loop_ _struct_ref.id _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 2RMQ PDB 1 2RMQ 1 CGCGAATTCGCG ? 2 2RMQ PDB 1 2RMQ 13 CGCGAATTCGCG ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2RMQ A 1 ? 12 ? 2RMQ 1 ? 12 ? 1 12 2 2 2RMQ B 1 ? 12 ? 2RMQ 13 ? 24 ? 13 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C4S 1 "O3'" ? ? ? 1_555 A S4G 2 P ? ? A C4S 1 A S4G 2 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? A S4G 2 "O3'" ? ? ? 1_555 A C4S 3 P ? ? A S4G 2 A C4S 3 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale3 covale both ? A C4S 3 "O3'" ? ? ? 1_555 A S4G 4 P ? ? A C4S 3 A S4G 4 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale4 covale both ? A S4G 4 "O3'" ? ? ? 1_555 A S4A 5 P ? ? A S4G 4 A S4A 5 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale5 covale both ? A S4A 5 "O3'" ? ? ? 1_555 A S4A 6 P ? ? A S4A 5 A S4A 6 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale6 covale both ? A S4A 6 "O3'" ? ? ? 1_555 A T49 7 P ? ? A S4A 6 A T49 7 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale7 covale both ? A T49 7 "O3'" ? ? ? 1_555 A T49 8 P ? ? A T49 7 A T49 8 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale8 covale both ? A T49 8 "O3'" ? ? ? 1_555 A C4S 9 P ? ? A T49 8 A C4S 9 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale9 covale both ? A C4S 9 "O3'" ? ? ? 1_555 A S4G 10 P ? ? A C4S 9 A S4G 10 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale10 covale both ? A S4G 10 "O3'" ? ? ? 1_555 A C4S 11 P ? ? A S4G 10 A C4S 11 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale11 covale both ? A C4S 11 "O3'" ? ? ? 1_555 A S4G 12 P ? ? A C4S 11 A S4G 12 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale12 covale both ? B C4S 1 "O3'" ? ? ? 1_555 B S4G 2 P ? ? B C4S 13 B S4G 14 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale13 covale both ? B S4G 2 "O3'" ? ? ? 1_555 B C4S 3 P ? ? B S4G 14 B C4S 15 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale14 covale both ? B C4S 3 "O3'" ? ? ? 1_555 B S4G 4 P ? ? B C4S 15 B S4G 16 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale15 covale both ? B S4G 4 "O3'" ? ? ? 1_555 B S4A 5 P ? ? B S4G 16 B S4A 17 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale16 covale both ? B S4A 5 "O3'" ? ? ? 1_555 B S4A 6 P ? ? B S4A 17 B S4A 18 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale17 covale both ? B S4A 6 "O3'" ? ? ? 1_555 B T49 7 P ? ? B S4A 18 B T49 19 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale18 covale both ? B T49 7 "O3'" ? ? ? 1_555 B T49 8 P ? ? B T49 19 B T49 20 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale19 covale both ? B T49 8 "O3'" ? ? ? 1_555 B C4S 9 P ? ? B T49 20 B C4S 21 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale20 covale both ? B C4S 9 "O3'" ? ? ? 1_555 B S4G 10 P ? ? B C4S 21 B S4G 22 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale21 covale both ? B S4G 10 "O3'" ? ? ? 1_555 B C4S 11 P ? ? B S4G 22 B C4S 23 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale22 covale both ? B C4S 11 "O3'" ? ? ? 1_555 B S4G 12 P ? ? B C4S 23 B S4G 24 1_555 ? ? ? ? ? ? ? 1.609 ? ? hydrog1 hydrog ? ? A C4S 1 N3 ? ? ? 1_555 B S4G 12 N1 ? ? A C4S 1 B S4G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C4S 1 N4 ? ? ? 1_555 B S4G 12 O6 ? ? A C4S 1 B S4G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C4S 1 O2 ? ? ? 1_555 B S4G 12 N2 ? ? A C4S 1 B S4G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A S4G 2 N1 ? ? ? 1_555 B C4S 11 N3 ? ? A S4G 2 B C4S 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A S4G 2 N2 ? ? ? 1_555 B C4S 11 O2 ? ? A S4G 2 B C4S 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A S4G 2 O6 ? ? ? 1_555 B C4S 11 N4 ? ? A S4G 2 B C4S 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C4S 3 N3 ? ? ? 1_555 B S4G 10 N1 ? ? A C4S 3 B S4G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C4S 3 N4 ? ? ? 1_555 B S4G 10 O6 ? ? A C4S 3 B S4G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C4S 3 O2 ? ? ? 1_555 B S4G 10 N2 ? ? A C4S 3 B S4G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A S4G 4 N1 ? ? ? 1_555 B C4S 9 N3 ? ? A S4G 4 B C4S 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A S4G 4 N2 ? ? ? 1_555 B C4S 9 O2 ? ? A S4G 4 B C4S 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A S4G 4 O6 ? ? ? 1_555 B C4S 9 N4 ? ? A S4G 4 B C4S 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A S4A 5 N6 ? ? ? 1_555 B T49 7 O4 ? ? A S4A 5 B T49 19 1_555 ? ? ? ? ? ? 'S4A-T49 PAIR' ? ? ? hydrog14 hydrog ? ? A S4A 5 N1 ? ? ? 1_555 B T49 8 N3 ? ? A S4A 5 B T49 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A S4A 5 N6 ? ? ? 1_555 B T49 8 O4 ? ? A S4A 5 B T49 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A S4A 6 N1 ? ? ? 1_555 B T49 7 N3 ? ? A S4A 6 B T49 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A S4A 6 N6 ? ? ? 1_555 B T49 7 O4 ? ? A S4A 6 B T49 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A T49 7 O4 ? ? ? 1_555 B S4A 5 N6 ? ? A T49 7 B S4A 17 1_555 ? ? ? ? ? ? 'T49-S4A PAIR' ? ? ? hydrog19 hydrog ? ? A T49 7 N3 ? ? ? 1_555 B S4A 6 N1 ? ? A T49 7 B S4A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A T49 7 O4 ? ? ? 1_555 B S4A 6 N6 ? ? A T49 7 B S4A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A T49 8 N3 ? ? ? 1_555 B S4A 5 N1 ? ? A T49 8 B S4A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A T49 8 O4 ? ? ? 1_555 B S4A 5 N6 ? ? A T49 8 B S4A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C4S 9 N3 ? ? ? 1_555 B S4G 4 N1 ? ? A C4S 9 B S4G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C4S 9 N4 ? ? ? 1_555 B S4G 4 O6 ? ? A C4S 9 B S4G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C4S 9 O2 ? ? ? 1_555 B S4G 4 N2 ? ? A C4S 9 B S4G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A S4G 10 N1 ? ? ? 1_555 B C4S 3 N3 ? ? A S4G 10 B C4S 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A S4G 10 N2 ? ? ? 1_555 B C4S 3 O2 ? ? A S4G 10 B C4S 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A S4G 10 O6 ? ? ? 1_555 B C4S 3 N4 ? ? A S4G 10 B C4S 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C4S 11 N3 ? ? ? 1_555 B S4G 2 N1 ? ? A C4S 11 B S4G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C4S 11 N4 ? ? ? 1_555 B S4G 2 O6 ? ? A C4S 11 B S4G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C4S 11 O2 ? ? ? 1_555 B S4G 2 N2 ? ? A C4S 11 B S4G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A S4G 12 N1 ? ? ? 1_555 B C4S 1 N3 ? ? A S4G 12 B C4S 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A S4G 12 N2 ? ? ? 1_555 B C4S 1 O2 ? ? A S4G 12 B C4S 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A S4G 12 O6 ? ? ? 1_555 B C4S 1 N4 ? ? A S4G 12 B C4S 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O6 A S4G 10 ? ? H2N4 B C4S 15 ? ? 1.38 2 1 H2N4 A C4S 9 ? ? O6 B S4G 16 ? ? 1.38 3 1 O6 A S4G 4 ? ? H2N4 B C4S 21 ? ? 1.38 4 1 H2N4 A C4S 3 ? ? O6 B S4G 22 ? ? 1.39 5 1 H1N6 A S4A 6 ? ? O4 B T49 19 ? ? 1.40 6 1 O4 A T49 7 ? ? H1N6 B S4A 18 ? ? 1.43 7 1 H1N6 A S4A 5 ? ? O4 B T49 20 ? ? 1.46 8 1 O4 A T49 8 ? ? H1N6 B S4A 17 ? ? 1.49 9 1 N3 A C4S 3 ? ? HN1 B S4G 22 ? ? 1.51 10 1 HN1 A S4G 10 ? ? N3 B C4S 15 ? ? 1.52 11 1 N3 A C4S 9 ? ? HN1 B S4G 16 ? ? 1.57 12 1 HN1 A S4G 4 ? ? N3 B C4S 21 ? ? 1.57 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A C4S 1 A C4S 1 ? DC ? 2 A S4G 2 A S4G 2 ? DG ? 3 A C4S 3 A C4S 3 ? DC ? 4 A S4G 4 A S4G 4 ? DG ? 5 A S4A 5 A S4A 5 ? DA ? 6 A S4A 6 A S4A 6 ? DA ? 7 A T49 7 A T49 7 ? DT ;S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE ; 8 A T49 8 A T49 8 ? DT ;S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE ; 9 A C4S 9 A C4S 9 ? DC ? 10 A S4G 10 A S4G 10 ? DG ? 11 A C4S 11 A C4S 11 ? DC ? 12 A S4G 12 A S4G 12 ? DG ? 13 B C4S 1 B C4S 13 ? DC ? 14 B S4G 2 B S4G 14 ? DG ? 15 B C4S 3 B C4S 15 ? DC ? 16 B S4G 4 B S4G 16 ? DG ? 17 B S4A 5 B S4A 17 ? DA ? 18 B S4A 6 B S4A 18 ? DA ? 19 B T49 7 B T49 19 ? DT ;S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE ; 20 B T49 8 B T49 20 ? DT ;S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE ; 21 B C4S 9 B C4S 21 ? DC ? 22 B S4G 10 B S4G 22 ? DG ? 23 B C4S 11 B C4S 23 ? DC ? 24 B S4G 12 B S4G 24 ? DG ? # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RMQ _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2RMQ _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.42mM 4'-thio DNA; 10mM sodium phosphate; 10mM sodium chloride; 0.01mM DSS; 95% H2O, 5% D2O ; 1 '95% H2O/5% D2O' ;0.42mM 4'-thio DNA; 10mM sodium phosphate; 10mM sodium chloride; 0.01mM DSS; 100% D2O ; 2 '100% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ;4'-thio DNA ; 0.42 mM ? 1 'sodium phosphate' 10 mM ? 1 'sodium chloride' 10 mM ? 1 DSS 0.01 mM ? 1 ;4'-thio DNA ; 0.42 mM ? 2 'sodium phosphate' 10 mM ? 2 'sodium chloride' 10 mM ? 2 DSS 0.01 mM ? 2 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 20 6.5 ambient ? 278 K 2 20 6.5 ambient ? 298 K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 2 1 2 '2D DQF-COSY' 2 2 2 '2D 1H-1H TOCSY' 2 3 2 '2D 1H-1H NOESY' 2 4 2 '2D 1H-1H NOESY' 2 5 2 '2D 1H-13C HSQC' 1 6 1 '2D 1H-1H NOESY' 1 7 1 '2D 1H-1H NOESY' 1 8 1 '2D 1H-13C JR-HMBC' # _pdbx_nmr_refine.entry_id 2RMQ _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection XwinNMR 3.5 1 'Bruker Biospin' collection TopSpin 1.0 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2.4 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRDraw 2.4 4 Goddard 'data analysis' Sparky 3.111 5 Goddard 'peak picking' Sparky 3.111 6 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNSSOLVE 1.1 7 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNSSOLVE 1.1 8 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal C4S O3P O N N 1 C4S P P N N 2 C4S O1P O N N 3 C4S O2P O N N 4 C4S "O5'" O N N 5 C4S N1 N N N 6 C4S C6 C N N 7 C4S C2 C N N 8 C4S O2 O N N 9 C4S N3 N N N 10 C4S C4 C N N 11 C4S N4 N N N 12 C4S C5 C N N 13 C4S "C2'" C N N 14 C4S "C5'" C N N 15 C4S "C4'" C N R 16 C4S "S4'" S N N 17 C4S "C1'" C N R 18 C4S "C3'" C N S 19 C4S "O3'" O N N 20 C4S "H15'" H N N 21 C4S "H25'" H N N 22 C4S "H4'" H N N 23 C4S "H1'" H N N 24 C4S H6 H N N 25 C4S H1N4 H N N 26 C4S H2N4 H N N 27 C4S H5 H N N 28 C4S "H12'" H N N 29 C4S "H22'" H N N 30 C4S "H3'" H N N 31 C4S HO3P H N N 32 C4S HO1P H N N 33 C4S "HO3'" H N N 34 S4A O3P O N N 35 S4A P P N N 36 S4A O1P O N N 37 S4A O2P O N N 38 S4A "O5'" O N N 39 S4A N9 N Y N 40 S4A C4 C Y N 41 S4A N3 N Y N 42 S4A C2 C Y N 43 S4A N1 N Y N 44 S4A C6 C Y N 45 S4A N6 N N N 46 S4A C5 C Y N 47 S4A N7 N Y N 48 S4A C8 C Y N 49 S4A "C2'" C N N 50 S4A "C5'" C N N 51 S4A "C4'" C N R 52 S4A "S4'" S N N 53 S4A "C1'" C N R 54 S4A "C3'" C N S 55 S4A "O3'" O N N 56 S4A "H15'" H N N 57 S4A "H25'" H N N 58 S4A "H4'" H N N 59 S4A "H1'" H N N 60 S4A H2 H N N 61 S4A H1N6 H N N 62 S4A H2N6 H N N 63 S4A H8 H N N 64 S4A "H12'" H N N 65 S4A "H22'" H N N 66 S4A "H3'" H N N 67 S4A HO3P H N N 68 S4A HO1P H N N 69 S4A "HO3'" H N N 70 S4G O3P O N N 71 S4G P P N N 72 S4G O1P O N N 73 S4G O2P O N N 74 S4G "O5'" O N N 75 S4G N9 N Y N 76 S4G C4 C Y N 77 S4G N3 N N N 78 S4G C2 C N N 79 S4G N2 N N N 80 S4G N1 N N N 81 S4G C6 C N N 82 S4G O6 O N N 83 S4G C5 C Y N 84 S4G N7 N Y N 85 S4G C8 C Y N 86 S4G "C2'" C N N 87 S4G "C5'" C N N 88 S4G "C4'" C N R 89 S4G "S4'" S N N 90 S4G "C1'" C N R 91 S4G "C3'" C N S 92 S4G "O3'" O N N 93 S4G "H15'" H N N 94 S4G "H25'" H N N 95 S4G "H4'" H N N 96 S4G "H1'" H N N 97 S4G H1N2 H N N 98 S4G H2N2 H N N 99 S4G HN1 H N N 100 S4G H8 H N N 101 S4G "H12'" H N N 102 S4G "H22'" H N N 103 S4G "H3'" H N N 104 S4G HO3P H N N 105 S4G HO2P H N N 106 S4G "HO3'" H N N 107 T49 O3P O N N 108 T49 P P N N 109 T49 O1P O N N 110 T49 O2P O N N 111 T49 "O5'" O N N 112 T49 "C5'" C N N 113 T49 "C4'" C N R 114 T49 "C3'" C N S 115 T49 "O3'" O N N 116 T49 "C2'" C N N 117 T49 "C1'" C N R 118 T49 N1 N N N 119 T49 C2 C N N 120 T49 O2 O N N 121 T49 N3 N N N 122 T49 C4 C N N 123 T49 O4 O N N 124 T49 C5 C N N 125 T49 C5M C N N 126 T49 C6 C N N 127 T49 S S N N 128 T49 H1P H N N 129 T49 H2P H N N 130 T49 "H5'1" H N N 131 T49 "H5'2" H N N 132 T49 "H4'" H N N 133 T49 "H3'" H N N 134 T49 HA H N N 135 T49 "H2'1" H N N 136 T49 "H2'2" H N N 137 T49 "H1'" H N N 138 T49 H3 H N N 139 T49 H5M1 H N N 140 T49 H5M2 H N N 141 T49 H5M3 H N N 142 T49 H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C4S O3P P sing N N 1 C4S O3P HO3P sing N N 2 C4S O2P P doub N N 3 C4S P "O5'" sing N N 4 C4S P O1P sing N N 5 C4S O1P HO1P sing N N 6 C4S "C5'" "O5'" sing N N 7 C4S "C1'" N1 sing N N 8 C4S N1 C6 sing N N 9 C4S N1 C2 sing N N 10 C4S H6 C6 sing N N 11 C4S C6 C5 doub N N 12 C4S O2 C2 doub N N 13 C4S C2 N3 sing N N 14 C4S N3 C4 doub N N 15 C4S C5 C4 sing N N 16 C4S C4 N4 sing N N 17 C4S N4 H1N4 sing N N 18 C4S N4 H2N4 sing N N 19 C4S C5 H5 sing N N 20 C4S "C3'" "C2'" sing N N 21 C4S "H22'" "C2'" sing N N 22 C4S "C2'" "H12'" sing N N 23 C4S "C2'" "C1'" sing N N 24 C4S "H15'" "C5'" sing N N 25 C4S "H25'" "C5'" sing N N 26 C4S "C5'" "C4'" sing N N 27 C4S "H4'" "C4'" sing N N 28 C4S "C4'" "C3'" sing N N 29 C4S "C4'" "S4'" sing N N 30 C4S "S4'" "C1'" sing N N 31 C4S "C1'" "H1'" sing N N 32 C4S "O3'" "C3'" sing N N 33 C4S "C3'" "H3'" sing N N 34 C4S "O3'" "HO3'" sing N N 35 S4A O3P P sing N N 36 S4A O3P HO3P sing N N 37 S4A O2P P doub N N 38 S4A P O1P sing N N 39 S4A P "O5'" sing N N 40 S4A O1P HO1P sing N N 41 S4A "O5'" "C5'" sing N N 42 S4A C8 N9 sing Y N 43 S4A "C1'" N9 sing N N 44 S4A N9 C4 sing Y N 45 S4A C5 C4 doub Y N 46 S4A C4 N3 sing Y N 47 S4A N3 C2 doub Y N 48 S4A C2 N1 sing Y N 49 S4A C2 H2 sing N N 50 S4A C6 N1 doub Y N 51 S4A C5 C6 sing Y N 52 S4A N6 C6 sing N N 53 S4A H1N6 N6 sing N N 54 S4A N6 H2N6 sing N N 55 S4A N7 C5 sing Y N 56 S4A C8 N7 doub Y N 57 S4A H8 C8 sing N N 58 S4A "C3'" "C2'" sing N N 59 S4A "C1'" "C2'" sing N N 60 S4A "C2'" "H22'" sing N N 61 S4A "C2'" "H12'" sing N N 62 S4A "H15'" "C5'" sing N N 63 S4A "H25'" "C5'" sing N N 64 S4A "C5'" "C4'" sing N N 65 S4A "H4'" "C4'" sing N N 66 S4A "C4'" "S4'" sing N N 67 S4A "C4'" "C3'" sing N N 68 S4A "S4'" "C1'" sing N N 69 S4A "C1'" "H1'" sing N N 70 S4A "H3'" "C3'" sing N N 71 S4A "C3'" "O3'" sing N N 72 S4A "O3'" "HO3'" sing N N 73 S4G P O3P sing N N 74 S4G O3P HO3P sing N N 75 S4G O1P P doub N N 76 S4G "O5'" P sing N N 77 S4G P O2P sing N N 78 S4G O2P HO2P sing N N 79 S4G "C5'" "O5'" sing N N 80 S4G "C1'" N9 sing N N 81 S4G N9 C4 sing Y N 82 S4G N9 C8 sing Y N 83 S4G N3 C4 sing N N 84 S4G C4 C5 doub Y N 85 S4G N3 C2 doub N N 86 S4G N2 C2 sing N N 87 S4G C2 N1 sing N N 88 S4G H1N2 N2 sing N N 89 S4G N2 H2N2 sing N N 90 S4G N1 HN1 sing N N 91 S4G N1 C6 sing N N 92 S4G C5 C6 sing N N 93 S4G C6 O6 doub N N 94 S4G C5 N7 sing Y N 95 S4G C8 N7 doub Y N 96 S4G H8 C8 sing N N 97 S4G "H22'" "C2'" sing N N 98 S4G "C3'" "C2'" sing N N 99 S4G "C2'" "H12'" sing N N 100 S4G "C2'" "C1'" sing N N 101 S4G "H25'" "C5'" sing N N 102 S4G "H15'" "C5'" sing N N 103 S4G "C4'" "C5'" sing N N 104 S4G "H4'" "C4'" sing N N 105 S4G "C4'" "C3'" sing N N 106 S4G "C4'" "S4'" sing N N 107 S4G "S4'" "C1'" sing N N 108 S4G "H1'" "C1'" sing N N 109 S4G "O3'" "C3'" sing N N 110 S4G "C3'" "H3'" sing N N 111 S4G "O3'" "HO3'" sing N N 112 T49 O3P P doub N N 113 T49 P O1P sing N N 114 T49 P O2P sing N N 115 T49 P "O5'" sing N N 116 T49 O1P H1P sing N N 117 T49 O2P H2P sing N N 118 T49 "O5'" "C5'" sing N N 119 T49 "C5'" "C4'" sing N N 120 T49 "C5'" "H5'1" sing N N 121 T49 "C5'" "H5'2" sing N N 122 T49 "C4'" "C3'" sing N N 123 T49 "C4'" S sing N N 124 T49 "C4'" "H4'" sing N N 125 T49 "C3'" "O3'" sing N N 126 T49 "C3'" "C2'" sing N N 127 T49 "C3'" "H3'" sing N N 128 T49 "O3'" HA sing N N 129 T49 "C2'" "C1'" sing N N 130 T49 "C2'" "H2'1" sing N N 131 T49 "C2'" "H2'2" sing N N 132 T49 "C1'" N1 sing N N 133 T49 "C1'" S sing N N 134 T49 "C1'" "H1'" sing N N 135 T49 N1 C2 sing N N 136 T49 N1 C6 sing N N 137 T49 C2 O2 doub N N 138 T49 C2 N3 sing N N 139 T49 N3 C4 sing N N 140 T49 N3 H3 sing N N 141 T49 C4 O4 doub N N 142 T49 C4 C5 sing N N 143 T49 C5 C5M sing N N 144 T49 C5 C6 doub N N 145 T49 C5M H5M1 sing N N 146 T49 C5M H5M2 sing N N 147 T49 C5M H5M3 sing N N 148 T49 C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2RMQ 'double helix' 2RMQ 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C4S 1 1_555 B S4G 12 1_555 1.098 -0.291 0.167 3.064 1.028 -3.946 1 A_C4S1:S4G24_B A 1 ? B 24 ? 19 1 1 A S4G 2 1_555 B C4S 11 1_555 0.279 -0.411 0.398 3.637 -9.432 -4.999 2 A_S4G2:C4S23_B A 2 ? B 23 ? 19 1 1 A C4S 3 1_555 B S4G 10 1_555 0.249 -0.597 -0.187 7.140 -15.464 -4.453 3 A_C4S3:S4G22_B A 3 ? B 22 ? 19 1 1 A S4G 4 1_555 B C4S 9 1_555 -0.054 -0.506 -0.470 -10.414 -12.872 -5.080 4 A_S4G4:C4S21_B A 4 ? B 21 ? 19 1 1 A S4A 5 1_555 B T49 8 1_555 0.787 -0.270 -0.019 -12.798 -15.287 -16.771 5 A_S4A5:T4920_B A 5 ? B 20 ? 20 1 1 A S4A 6 1_555 B T49 7 1_555 0.991 -0.083 0.365 -4.032 -3.269 -26.131 6 A_S4A6:T4919_B A 6 ? B 19 ? 20 1 1 A T49 7 1_555 B S4A 6 1_555 -0.209 0.068 0.334 0.054 -5.120 -31.341 7 A_T497:S4A18_B A 7 ? B 18 ? 20 1 1 A T49 8 1_555 B S4A 5 1_555 -0.312 -0.293 0.193 11.484 -16.140 -19.926 8 A_T498:S4A17_B A 8 ? B 17 ? 20 1 1 A C4S 9 1_555 B S4G 4 1_555 0.019 -0.485 -0.399 11.093 -7.881 -5.965 9 A_C4S9:S4G16_B A 9 ? B 16 ? 19 1 1 A S4G 10 1_555 B C4S 3 1_555 -0.283 -0.598 -0.418 -9.798 -13.686 -3.124 10 A_S4G10:C4S15_B A 10 ? B 15 ? 19 1 1 A C4S 11 1_555 B S4G 2 1_555 -0.338 -0.399 0.425 -3.778 -8.522 -5.781 11 A_C4S11:S4G14_B A 11 ? B 14 ? 19 1 1 A S4G 12 1_555 B C4S 1 1_555 -1.250 -0.412 0.165 -5.303 0.534 -3.762 12 A_S4G12:C4S13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C4S 1 1_555 B S4G 12 1_555 A S4G 2 1_555 B C4S 11 1_555 -0.266 -2.269 2.477 -1.684 26.548 30.116 -4.882 0.291 0.422 42.216 2.678 39.977 1 AA_C4S1S4G2:C4S23S4G24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A S4G 2 1_555 B C4S 11 1_555 A C4S 3 1_555 B S4G 10 1_555 0.223 -2.505 2.733 5.391 -6.234 29.591 -3.605 0.555 3.173 -11.918 -10.305 30.692 2 AA_S4G2C4S3:S4G22C4S23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A C4S 3 1_555 B S4G 10 1_555 A S4G 4 1_555 B C4S 9 1_555 -0.639 -2.564 3.147 2.494 19.912 28.201 -6.542 1.356 1.090 35.711 -4.474 34.494 3 AA_C4S3S4G4:C4S21S4G22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A S4G 4 1_555 B C4S 9 1_555 A S4A 5 1_555 B T49 8 1_555 -0.606 -1.997 2.815 -3.016 5.743 31.788 -4.400 0.652 2.471 10.350 5.435 32.426 4 AA_S4G4S4A5:T4920C4S21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A S4A 5 1_555 B T49 8 1_555 A S4A 6 1_555 B T49 7 1_555 -0.933 -2.155 2.240 -1.089 4.054 44.702 -3.065 1.157 2.068 5.317 1.428 44.889 5 AA_S4A5S4A6:T4919T4920_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A S4A 6 1_555 B T49 7 1_555 A T49 7 1_555 B S4A 6 1_555 -0.192 -2.631 2.592 0.626 -1.582 36.073 -4.064 0.381 2.698 -2.553 -1.010 36.111 6 AA_S4A6T497:S4A18T4919_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A T49 7 1_555 B S4A 6 1_555 A T49 8 1_555 B S4A 5 1_555 0.953 -2.158 2.175 0.215 4.552 42.561 -3.245 -1.292 1.949 6.249 -0.296 42.793 7 AA_T497T498:S4A17S4A18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A T49 8 1_555 B S4A 5 1_555 A C4S 9 1_555 B S4G 4 1_555 0.779 -2.128 2.745 4.123 3.126 30.540 -4.483 -0.804 2.599 5.882 -7.757 30.965 8 AA_T498C4S9:S4G16S4A17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A C4S 9 1_555 B S4G 4 1_555 A S4G 10 1_555 B C4S 3 1_555 0.618 -2.834 3.401 -0.896 13.426 29.265 -7.173 -1.252 1.928 24.975 1.666 32.149 9 AA_C4S9S4G10:C4S15S4G16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A S4G 10 1_555 B C4S 3 1_555 A C4S 11 1_555 B S4G 2 1_555 -0.293 -2.396 2.814 -7.278 -9.694 28.082 -2.638 -0.879 3.407 -18.901 14.191 30.538 10 AA_S4G10C4S11:S4G14C4S15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A C4S 11 1_555 B S4G 2 1_555 A S4G 12 1_555 B C4S 1 1_555 -0.022 -2.584 2.396 0.115 13.518 31.644 -5.597 0.047 1.221 23.494 -0.200 34.343 11 AA_C4S11S4G12:C4S13S4G14_BB A 11 ? B 14 ? A 12 ? B 13 ? # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Bruker DRX 1 'Bruker DRX' 600 Bruker DRX 2 'Bruker DRX' # _atom_sites.entry_id 2RMQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_