data_2RP1 # _entry.id 2RP1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RP1 pdb_00002rp1 10.2210/pdb2rp1/pdb RCSB RCSB150112 ? ? WWPDB D_1000150112 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 1KPY PDB 'previous lower resolution structure' unspecified 1KPZ PDB 'previous lower resolution structure' unspecified 2RP0 PDB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RP1 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-04-25 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cornish, P.V.' 1 'Hennig, M.' 2 'Giedroc, D.P.' 3 # _citation.id primary _citation.title 'Frameshifting RNA pseudoknots: Structure and mechanism.' _citation.journal_abbrev 'Virus Res.' _citation.journal_volume 139 _citation.page_first 193 _citation.page_last 208 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country NE _citation.journal_id_ISSN 0168-1702 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18621088 _citation.pdbx_database_id_DOI 10.1016/j.virusres.2008.06.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Giedroc, D.P.' 1 ? primary 'Cornish, P.V.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'PEMV-1 mRNA pseudoknot' _entity.formula_weight 8672.255 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'UCCGGU(CH)GACUCCGGAGAAACAAAGUC' _entity_poly.pdbx_seq_one_letter_code_can UCCGGUCGACUCCGGAGAAACAAAGUC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 C n 1 3 C n 1 4 G n 1 5 G n 1 6 U n 1 7 CH n 1 8 G n 1 9 A n 1 10 C n 1 11 U n 1 12 C n 1 13 C n 1 14 G n 1 15 G n 1 16 A n 1 17 G n 1 18 A n 1 19 A n 1 20 A n 1 21 C n 1 22 A n 1 23 A n 1 24 A n 1 25 G n 1 26 U n 1 27 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'RNA was produced by in vitro transcription using SP6 RNA polymerase' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2RP1 _struct_ref.pdbx_db_accession 2RP1 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RP1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 27 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2RP1 _struct_ref_seq.db_align_beg 4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 30 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CH 'RNA linking' n ;N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE ; ? 'C9 H15 N3 O8 P 1' 324.204 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '3D 1H-13C NOESY' 1 2 1 '2D 1H-1H NOESY' 1 3 3 'J-modulated CT-HSQC' 1 4 3 CT-TROSY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '2 mM RNA, 10 mM potassium phosphate, 100 mM potassium chloride, 0.1 mM DSS, 5 mM magnesium chloride, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' ;2 mM [U-100% 13C; U-100% 15N] RNA, 10 mM potassium phosphate, 100 mM potassium chloride, 0.1 mM DSS, 5 mM magnesium chloride, 100% D2O ; 2 '100% D2O' ;2 mM [U-100% 13C; U-100% 15N] RNA, 10 mM potassium phosphate, 100 mM potassium chloride, 0.1 mM DSS, 20 mg/ml Pf1 phage, 5 mM magnesium chloride, 100% D2O ; 3 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 900 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' 500 Varian INOVA 3 'Varian INOVA' 600 Varian INOVA 4 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2RP1 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 28 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RP1 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2RP1 _pdbx_nmr_representative.conformer_id ? _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Schwieters, Kuszewski, Tjandra, Clore' refinement 'X-PLOR NIH' ? 1 Goddard 'chemical shift assignment' Sparky ? 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 3 'Accelrys Software Inc.' 'peak picking' Felix ? 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RP1 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RP1 _struct.title 'Refined solution structure of the PEMV-1 mRNA pseudoknot, regularized average structure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2RP1 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA pseudoknot, frameshifting, RNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A U 6 "O3'" ? ? ? 1_555 A CH 7 P ? ? A U 9 A CH 10 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? A CH 7 "O3'" ? ? ? 1_555 A G 8 P ? ? A CH 10 A G 11 1_555 ? ? ? ? ? ? ? 1.592 ? ? hydrog1 hydrog ? ? A U 1 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 4 A A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A U 1 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 4 A A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 15 N1 ? ? A C 5 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 15 O6 ? ? A C 5 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 15 N2 ? ? A C 5 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 14 N1 ? ? A C 6 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 14 O6 ? ? A C 6 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 14 N2 ? ? A C 6 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 13 N3 ? ? A G 7 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 13 O2 ? ? A G 7 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 13 N4 ? ? A G 7 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 N2 ? ? ? 1_555 A A 22 N7 ? ? A G 7 A A 25 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog13 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 12 N3 ? ? A G 8 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 12 O2 ? ? A G 8 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 12 N4 ? ? A G 8 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 5 N2 ? ? ? 1_555 A A 23 N1 ? ? A G 8 A A 26 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog17 hydrog ? ? A G 5 N3 ? ? ? 1_555 A A 23 N6 ? ? A G 8 A A 26 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog18 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 24 N7 ? ? A U 9 A A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog19 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 24 N6 ? ? A U 9 A A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog20 hydrog ? ? A CH 7 O2 ? ? ? 1_555 A C 10 N4 ? ? A CH 10 A C 13 1_555 ? ? ? ? ? ? 'CH-C MISPAIR' ? ? ? hydrog21 hydrog ? ? A CH 7 N4 ? ? ? 1_555 A G 25 N7 ? ? A CH 10 A G 28 1_555 ? ? ? ? ? ? 'CH-G PAIR' ? ? ? hydrog22 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 27 N3 ? ? A G 11 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 27 O2 ? ? A G 11 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 27 N4 ? ? A G 11 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 13 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 13 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 13 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 O2 ? ? ? 1_555 A A 24 N6 ? ? A C 15 A A 27 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog29 hydrog ? ? A C 13 O2 ? ? ? 1_555 A A 22 N6 ? ? A C 16 A A 25 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog30 hydrog ? ? A G 14 N3 ? ? ? 1_555 A C 21 N4 ? ? A G 17 A C 24 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 2RP1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 4 4 U U A . n A 1 2 C 2 5 5 C C A . n A 1 3 C 3 6 6 C C A . n A 1 4 G 4 7 7 G G A . n A 1 5 G 5 8 8 G G A . n A 1 6 U 6 9 9 U U A . n A 1 7 CH 7 10 10 CH CH A . n A 1 8 G 8 11 11 G G A . n A 1 9 A 9 12 12 A A A . n A 1 10 C 10 13 13 C C A . n A 1 11 U 11 14 14 U U A . n A 1 12 C 12 15 15 C C A . n A 1 13 C 13 16 16 C C A . n A 1 14 G 14 17 17 G G A . n A 1 15 G 15 18 18 G G A . n A 1 16 A 16 19 19 A A A . n A 1 17 G 17 20 20 G G A . n A 1 18 A 18 21 21 A A A . n A 1 19 A 19 22 22 A A A . n A 1 20 A 20 23 23 A A A . n A 1 21 C 21 24 24 C C A . n A 1 22 A 22 25 25 A A A . n A 1 23 A 23 26 26 A A A . n A 1 24 A 24 27 27 A A A . n A 1 25 G 25 28 28 G G A . n A 1 26 U 26 29 29 U U A . n A 1 27 C 27 30 30 C C A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CH _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CH _pdbx_struct_mod_residue.auth_seq_id 10 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id C _pdbx_struct_mod_residue.details ;N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE ; # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'RNA (27-MER)' 2 mM ? 1 'potassium phosphate' 10 mM ? 1 'potassium chloride' 100 mM ? 1 DSS .1 mM ? 1 'magnesium chloride' 5 mM ? 1 'RNA (27-MER)' 2 mM '[U-100% 13C; U-100% 15N]' 2 'potassium phosphate' 10 mM ? 2 'potassium chloride' 100 mM ? 2 DSS .1 mM ? 2 'magnesium chloride' 5 mM ? 2 'RNA (27-MER)' 2 mM '[U-100% 13C; U-100% 15N]' 3 'potassium phosphate' 10 mM ? 3 'potassium chloride' 100 mM ? 3 DSS .1 mM ? 3 'Pf1 phage' 20 % ? 3 'magnesium chloride' 5 mM ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO2'" A G 7 ? ? "O4'" A G 8 ? ? 1.53 2 1 "HO2'" A A 21 ? ? "O3'" A A 22 ? ? 1.53 3 1 "HO2'" A U 4 ? ? "O5'" A C 5 ? ? 1.54 4 1 "HO2'" A C 24 ? ? "O5'" A A 25 ? ? 1.58 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O5'" A C 16 ? ? "C5'" A C 16 ? ? 1.344 1.420 -0.076 0.009 N 2 1 "C4'" A A 19 ? ? "C3'" A A 19 ? ? 1.458 1.521 -0.063 0.010 N 3 1 "O3'" A A 19 ? ? "C3'" A A 19 ? ? 1.327 1.417 -0.090 0.014 N 4 1 "O3'" A A 19 ? ? P A G 20 ? ? 1.518 1.607 -0.089 0.012 Y 5 1 P A G 20 ? ? "O5'" A G 20 ? ? 1.470 1.593 -0.123 0.010 N 6 1 "O5'" A G 20 ? ? "C5'" A G 20 ? ? 1.335 1.420 -0.085 0.009 N 7 1 "C5'" A G 20 ? ? "C4'" A G 20 ? ? 1.429 1.508 -0.079 0.007 N 8 1 "C3'" A G 20 ? ? "C2'" A G 20 ? ? 1.441 1.523 -0.082 0.011 N 9 1 "O3'" A G 20 ? ? "C3'" A G 20 ? ? 1.292 1.417 -0.125 0.014 N 10 1 "C1'" A G 20 ? ? N9 A G 20 ? ? 1.273 1.464 -0.191 0.014 N 11 1 C2 A G 20 ? ? N3 A G 20 ? ? 1.270 1.323 -0.053 0.008 N 12 1 C5 A G 20 ? ? N7 A G 20 ? ? 1.433 1.388 0.045 0.006 N 13 1 C8 A G 20 ? ? N9 A G 20 ? ? 1.331 1.374 -0.043 0.007 N 14 1 N9 A G 20 ? ? C4 A G 20 ? ? 1.214 1.375 -0.161 0.008 N 15 1 "O3'" A G 20 ? ? P A A 21 ? ? 1.416 1.607 -0.191 0.012 Y 16 1 P A A 21 ? ? "O5'" A A 21 ? ? 1.522 1.593 -0.071 0.010 N 17 1 "O5'" A A 21 ? ? "C5'" A A 21 ? ? 1.306 1.420 -0.114 0.009 N 18 1 P A A 22 ? ? "O5'" A A 22 ? ? 1.530 1.593 -0.063 0.010 N 19 1 "C3'" A A 26 ? ? "C2'" A A 26 ? ? 1.447 1.523 -0.076 0.011 N 20 1 "O5'" A A 27 ? ? "C5'" A A 27 ? ? 1.351 1.420 -0.069 0.009 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N7 A G 7 ? ? C8 A G 7 ? ? N9 A G 7 ? ? 117.53 113.10 4.43 0.50 N 2 1 C8 A G 7 ? ? N9 A G 7 ? ? C4 A G 7 ? ? 103.61 106.40 -2.79 0.40 N 3 1 N7 A G 8 ? ? C8 A G 8 ? ? N9 A G 8 ? ? 117.61 113.10 4.51 0.50 N 4 1 C8 A G 8 ? ? N9 A G 8 ? ? C4 A G 8 ? ? 103.47 106.40 -2.93 0.40 N 5 1 N7 A G 11 ? ? C8 A G 11 ? ? N9 A G 11 ? ? 117.56 113.10 4.46 0.50 N 6 1 C8 A G 11 ? ? N9 A G 11 ? ? C4 A G 11 ? ? 103.60 106.40 -2.80 0.40 N 7 1 "O5'" A A 12 ? ? "C5'" A A 12 ? ? "C4'" A A 12 ? ? 104.19 109.40 -5.21 0.80 N 8 1 N7 A A 12 ? ? C8 A A 12 ? ? N9 A A 12 ? ? 117.62 113.80 3.82 0.50 N 9 1 C8 A A 12 ? ? N9 A A 12 ? ? C4 A A 12 ? ? 103.26 105.80 -2.54 0.40 N 10 1 "O4'" A C 13 ? ? "C1'" A C 13 ? ? N1 A C 13 ? ? 112.97 108.50 4.47 0.70 N 11 1 "O4'" A U 14 ? ? "C1'" A U 14 ? ? N1 A U 14 ? ? 112.92 108.50 4.42 0.70 N 12 1 "C5'" A C 15 ? ? "C4'" A C 15 ? ? "O4'" A C 15 ? ? 115.71 109.80 5.91 0.90 N 13 1 "C5'" A C 16 ? ? "C4'" A C 16 ? ? "C3'" A C 16 ? ? 103.94 115.20 -11.26 1.40 N 14 1 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 117.53 113.10 4.43 0.50 N 15 1 C8 A G 17 ? ? N9 A G 17 ? ? C4 A G 17 ? ? 103.96 106.40 -2.44 0.40 N 16 1 N7 A G 18 ? ? C8 A G 18 ? ? N9 A G 18 ? ? 117.44 113.10 4.34 0.50 N 17 1 "C5'" A A 19 ? ? "C4'" A A 19 ? ? "O4'" A A 19 ? ? 115.27 109.80 5.47 0.90 N 18 1 "C4'" A A 19 ? ? "C3'" A A 19 ? ? "C2'" A A 19 ? ? 109.00 102.60 6.40 1.00 N 19 1 N7 A A 19 ? ? C8 A A 19 ? ? N9 A A 19 ? ? 117.21 113.80 3.41 0.50 N 20 1 P A G 20 ? ? "O5'" A G 20 ? ? "C5'" A G 20 ? ? 110.87 120.90 -10.03 1.60 N 21 1 "C5'" A G 20 ? ? "C4'" A G 20 ? ? "C3'" A G 20 ? ? 106.64 115.20 -8.56 1.40 N 22 1 "C5'" A G 20 ? ? "C4'" A G 20 ? ? "O4'" A G 20 ? ? 116.63 109.80 6.83 0.90 N 23 1 "C1'" A G 20 ? ? "O4'" A G 20 ? ? "C4'" A G 20 ? ? 103.82 109.70 -5.88 0.70 N 24 1 "C2'" A G 20 ? ? "C3'" A G 20 ? ? "O3'" A G 20 ? ? 95.41 109.50 -14.09 2.20 N 25 1 "C4'" A G 20 ? ? "C3'" A G 20 ? ? "C2'" A G 20 ? ? 109.84 102.60 7.24 1.00 N 26 1 "C3'" A G 20 ? ? "C2'" A G 20 ? ? "C1'" A G 20 ? ? 96.73 101.30 -4.57 0.70 N 27 1 "O4'" A G 20 ? ? "C1'" A G 20 ? ? "C2'" A G 20 ? ? 113.35 107.60 5.75 0.90 N 28 1 N9 A G 20 ? ? "C1'" A G 20 ? ? "C2'" A G 20 ? ? 100.27 112.00 -11.73 1.10 N 29 1 N3 A G 20 ? ? C4 A G 20 ? ? C5 A G 20 ? ? 132.52 128.60 3.92 0.50 N 30 1 C5 A G 20 ? ? N7 A G 20 ? ? C8 A G 20 ? ? 99.22 104.30 -5.08 0.50 N 31 1 C8 A G 20 ? ? N9 A G 20 ? ? C4 A G 20 ? ? 110.38 106.40 3.98 0.40 N 32 1 N3 A G 20 ? ? C4 A G 20 ? ? N9 A G 20 ? ? 120.62 126.00 -5.38 0.60 N 33 1 C4 A G 20 ? ? N9 A G 20 ? ? "C1'" A G 20 ? ? 115.67 126.50 -10.83 1.30 N 34 1 "O3'" A G 20 ? ? P A A 21 ? ? "O5'" A A 21 ? ? 89.80 104.00 -14.20 1.90 Y 35 1 "C5'" A A 21 ? ? "C4'" A A 21 ? ? "C3'" A A 21 ? ? 106.21 115.20 -8.99 1.40 N 36 1 "O5'" A A 23 ? ? P A A 23 ? ? OP2 A A 23 ? ? 98.82 105.70 -6.88 0.90 N 37 1 N7 A A 25 ? ? C8 A A 25 ? ? N9 A A 25 ? ? 116.97 113.80 3.17 0.50 N 38 1 N7 A A 26 ? ? C8 A A 26 ? ? N9 A A 26 ? ? 117.02 113.80 3.22 0.50 N 39 1 "O3'" A A 26 ? ? P A A 27 ? ? "O5'" A A 27 ? ? 90.22 104.00 -13.78 1.90 Y 40 1 N7 A A 27 ? ? C8 A A 27 ? ? N9 A A 27 ? ? 117.31 113.80 3.51 0.50 N 41 1 C5 A G 28 ? ? N7 A G 28 ? ? C8 A G 28 ? ? 101.22 104.30 -3.08 0.50 N 42 1 N7 A G 28 ? ? C8 A G 28 ? ? N9 A G 28 ? ? 117.64 113.10 4.54 0.50 N 43 1 C8 A G 28 ? ? N9 A G 28 ? ? C4 A G 28 ? ? 103.81 106.40 -2.59 0.40 N 44 1 "O5'" A U 29 ? ? "C5'" A U 29 ? ? "C4'" A U 29 ? ? 99.23 109.40 -10.17 0.80 N 45 1 "O3'" A U 29 ? ? P A C 30 ? ? "O5'" A C 30 ? ? 90.09 104.00 -13.91 1.90 Y 46 1 "O5'" A C 30 ? ? P A C 30 ? ? OP2 A C 30 ? ? 99.47 105.70 -6.23 0.90 N 47 1 "O5'" A C 30 ? ? "C5'" A C 30 ? ? "C4'" A C 30 ? ? 100.76 109.40 -8.64 0.80 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G A 8 ? ? 0.052 'SIDE CHAIN' 2 1 G A 11 ? ? 0.068 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2RP1 'double helix' 2RP1 'a-form double helix' 2RP1 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 1 1_555 A A 16 1_555 0.002 -0.150 -0.013 0.497 -0.353 1.251 1 A_U4:A19_A A 4 ? A 19 ? 20 1 1 A C 2 1_555 A G 15 1_555 0.116 -0.130 0.012 0.150 0.714 -1.971 2 A_C5:G18_A A 5 ? A 18 ? 19 1 1 A C 3 1_555 A G 14 1_555 0.144 -0.130 -0.004 -0.127 -0.408 -1.757 3 A_C6:G17_A A 6 ? A 17 ? 19 1 1 A G 4 1_555 A C 13 1_555 -0.118 -0.111 0.013 0.515 -0.943 -1.358 4 A_G7:C16_A A 7 ? A 16 ? 19 1 1 A G 5 1_555 A C 12 1_555 -0.330 -0.189 0.067 -1.116 -3.274 -6.586 5 A_G8:C15_A A 8 ? A 15 ? 19 1 1 A A 24 1_555 A U 6 1_555 0.834 -3.569 -1.198 20.616 3.168 74.930 6 A_A27:U9_A A 27 ? A 9 ? 23 3 1 A G 25 1_555 A C 10 1_555 -0.115 -0.112 0.034 -2.269 -5.154 -1.726 7 A_G28:C13_A A 28 ? A 13 ? 19 1 1 A G 8 1_555 A C 27 1_555 -0.146 -0.107 0.017 -3.297 -3.887 -0.449 8 A_G11:C30_A A 11 ? A 30 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 1 1_555 A A 16 1_555 A C 2 1_555 A G 15 1_555 0.418 -1.695 3.930 -0.054 -3.969 29.270 -2.283 -0.835 4.118 -7.809 0.105 29.532 1 AA_U4C5:G18A19_AA A 4 ? A 19 ? A 5 ? A 18 ? 1 A C 2 1_555 A G 15 1_555 A C 3 1_555 A G 14 1_555 -0.901 -1.853 3.463 2.494 17.506 31.458 -5.275 1.783 2.100 29.548 -4.209 35.978 2 AA_C5C6:G17G18_AA A 5 ? A 18 ? A 6 ? A 17 ? 1 A C 3 1_555 A G 14 1_555 A G 4 1_555 A C 13 1_555 -0.139 -0.123 3.921 -1.254 15.168 33.708 -2.653 0.017 3.549 24.657 2.038 36.894 3 AA_C6G7:C16G17_AA A 6 ? A 17 ? A 7 ? A 16 ? 1 A G 4 1_555 A C 13 1_555 A G 5 1_555 A C 12 1_555 0.751 -0.634 4.154 -1.603 9.934 34.295 -2.817 -1.513 3.792 16.413 2.649 35.698 4 AA_G7G8:C15C16_AA A 7 ? A 16 ? A 8 ? A 15 ? 1 A G 5 1_555 A C 12 1_555 A A 24 1_555 A U 6 1_555 -6.174 -0.428 1.419 16.637 -11.877 26.271 -0.867 10.649 -1.761 -22.328 -31.277 33.176 5 AA_G8A27:U9C15_AA A 8 ? A 15 ? A 27 ? A 9 ? 1 A A 24 1_555 A U 6 1_555 A G 25 1_555 A C 10 1_555 0.368 -2.432 4.009 -1.973 5.884 80.849 -2.053 -0.344 3.848 4.531 1.519 81.046 6 AA_A27G28:C13U9_AA A 27 ? A 9 ? A 28 ? A 13 ? 1 A G 25 1_555 A C 10 1_555 A G 8 1_555 A C 27 1_555 2.752 -5.457 -3.483 -138.087 -82.784 101.133 -3.285 -0.480 -2.424 -42.490 70.875 167.965 7 AA_G28G11:C30C13_AA A 28 ? A 13 ? A 11 ? A 30 ? #