data_2RQ5 # _entry.id 2RQ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RQ5 pdb_00002rq5 10.2210/pdb2rq5/pdb RCSB RCSB150151 ? ? WWPDB D_1000150151 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RQ5 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-02-06 _pdbx_database_status.SG_entry . _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kusunoki, H.' 1 'Kohno, T.' 2 # _citation.id primary _citation.title 'Solution structure of the AT-rich interaction domain of Jumonji/JARID2' _citation.journal_abbrev Proteins _citation.journal_volume 76 _citation.page_first 1023 _citation.page_last 1028 _citation.year 2009 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19455710 _citation.pdbx_database_id_DOI 10.1002/prot.22449 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kusunoki, H.' 1 ? primary 'Takeuchi, T.' 2 ? primary 'Kohno, T.' 3 ? # _cell.entry_id 2RQ5 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RQ5 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Protein Jumonji' _entity.formula_weight 13979.377 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'ARID domain, UNP residues 615-730' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Jumonji/ARID domain-containing protein 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQ DRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEK ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQ DRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 GLY n 1 8 ARG n 1 9 ARG n 1 10 TRP n 1 11 GLY n 1 12 PRO n 1 13 ASN n 1 14 VAL n 1 15 GLN n 1 16 ARG n 1 17 LEU n 1 18 ALA n 1 19 CYS n 1 20 ILE n 1 21 LYS n 1 22 LYS n 1 23 HIS n 1 24 LEU n 1 25 ARG n 1 26 SER n 1 27 GLN n 1 28 GLY n 1 29 ILE n 1 30 THR n 1 31 MET n 1 32 ASP n 1 33 GLU n 1 34 LEU n 1 35 PRO n 1 36 LEU n 1 37 ILE n 1 38 GLY n 1 39 GLY n 1 40 CYS n 1 41 GLU n 1 42 LEU n 1 43 ASP n 1 44 LEU n 1 45 ALA n 1 46 CYS n 1 47 PHE n 1 48 PHE n 1 49 ARG n 1 50 LEU n 1 51 ILE n 1 52 ASN n 1 53 GLU n 1 54 MET n 1 55 GLY n 1 56 GLY n 1 57 MET n 1 58 GLN n 1 59 GLN n 1 60 VAL n 1 61 THR n 1 62 ASP n 1 63 LEU n 1 64 LYS n 1 65 LYS n 1 66 TRP n 1 67 ASN n 1 68 LYS n 1 69 LEU n 1 70 ALA n 1 71 ASP n 1 72 MET n 1 73 LEU n 1 74 ARG n 1 75 ILE n 1 76 PRO n 1 77 LYS n 1 78 THR n 1 79 ALA n 1 80 GLN n 1 81 ASP n 1 82 ARG n 1 83 LEU n 1 84 ALA n 1 85 LYS n 1 86 LEU n 1 87 GLN n 1 88 GLU n 1 89 ALA n 1 90 TYR n 1 91 CYS n 1 92 GLN n 1 93 TYR n 1 94 LEU n 1 95 LEU n 1 96 SER n 1 97 TYR n 1 98 ASP n 1 99 SER n 1 100 LEU n 1 101 SER n 1 102 PRO n 1 103 GLU n 1 104 GLU n 1 105 HIS n 1 106 ARG n 1 107 ARG n 1 108 LEU n 1 109 GLU n 1 110 LYS n 1 111 GLU n 1 112 VAL n 1 113 LEU n 1 114 MET n 1 115 GLU n 1 116 LYS n 1 117 GLU n 1 118 ILE n 1 119 LEU n 1 120 GLU n 1 121 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Jmj _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pGEX-6P2 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code JARD2_MOUSE _struct_ref.pdbx_db_accession Q62315 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAK LQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEK ; _struct_ref.pdbx_align_begin 615 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RQ5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 121 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q62315 _struct_ref_seq.db_align_beg 615 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 730 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 615 _struct_ref_seq.pdbx_auth_seq_align_end 730 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2RQ5 GLY A 1 ? UNP Q62315 ? ? 'expression tag' 610 1 1 2RQ5 PRO A 2 ? UNP Q62315 ? ? 'expression tag' 611 2 1 2RQ5 LEU A 3 ? UNP Q62315 ? ? 'expression tag' 612 3 1 2RQ5 GLY A 4 ? UNP Q62315 ? ? 'expression tag' 613 4 1 2RQ5 SER A 5 ? UNP Q62315 ? ? 'expression tag' 614 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 2 '2D 1H-15N HSQC' 1 3 1 '3D 1H-15N NOESY' 1 4 1 '3D HNHA' 1 5 1 '3D HNHB' 1 6 2 '2D 1H-13C HSQC' 1 7 4 '2D 1H-13C HSQC' 1 8 2 '3D HNCO' 1 9 2 '3D HCACO' 1 10 2 '3D HN(CO)CA' 1 11 2 '3D HNCA' 1 12 2 '3D CBCA(CO)NH' 1 13 2 '3D HNCACB' 1 14 2 '3D C(CO)NH' 1 15 2 '3D H(CCO)NH' 1 16 2 '3D HBHA(CO)NH' 1 17 2 '3D HCCH-TOCSY' 1 18 3 '3D HCCH-TOCSY' 1 19 2 '3D 1H-13C NOESY' 1 20 3 '3D 1H-13C NOESY' 1 21 2 '2D HBCBCGCDHD' 1 22 2 '2D HBCBCGCDCEHE' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 90 _pdbx_nmr_exptl_sample_conditions.pH 6.4 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 288 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.25-1.6 mM [U-15N] Jmj-ARID(615-730)-1, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.25-1.6 mM [U-13C; U-15N] Jmj-ARID(615-730)-2, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '0.25-1.6 mM [U-13C; U-15N] Jmj-ARID(615-730)-3, 100% D2O' 3 '100% D2O' '0.25-1.6 mM [U-10% 13C; U-15N] Jmj-ARID(615-730)-4, 90% H2O/10% D2O' 4 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Bruker AVANCE 1 'Bruker Avance' 700 Bruker 'AVANCE II' 2 'Bruker Avance II' # _pdbx_nmr_refine.entry_id 2RQ5 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RQ5 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2RQ5 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.1 1 'Guntert, Mumenthaler and Wuthrich' collection CYANA 2.1 2 'Bruker Biospin' processing TopSpin . 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe . 4 Goddard 'data analysis' Sparky . 5 Garrett 'data analysis' PIPP . 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RQ5 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RQ5 _struct.title 'Solution structure of the AT-rich interaction domain (ARID) of Jumonji/JARID2' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RQ5 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'PROTEIN, Developmental protein, Nucleus, Repressor, Transcription, Transcription regulation' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? GLN A 27 ? PRO A 621 GLN A 636 1 ? 16 HELX_P HELX_P2 2 LEU A 44 ? GLU A 53 ? LEU A 653 GLU A 662 1 ? 10 HELX_P HELX_P3 3 MET A 57 ? ASP A 62 ? MET A 666 ASP A 671 1 ? 6 HELX_P HELX_P4 4 TRP A 66 ? MET A 72 ? TRP A 675 MET A 681 1 ? 7 HELX_P HELX_P5 5 ARG A 82 ? CYS A 91 ? ARG A 691 CYS A 700 1 ? 10 HELX_P HELX_P6 6 LEU A 94 ? SER A 99 ? LEU A 703 SER A 708 1 ? 6 HELX_P HELX_P7 7 PRO A 102 ? GLU A 117 ? PRO A 711 GLU A 726 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 36 ? ILE A 37 ? LEU A 645 ILE A 646 A 2 CYS A 40 ? GLU A 41 ? CYS A 649 GLU A 650 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 37 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 646 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id CYS _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 40 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id CYS _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 649 # _atom_sites.entry_id 2RQ5 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 610 610 GLY GLY A . n A 1 2 PRO 2 611 611 PRO PRO A . n A 1 3 LEU 3 612 612 LEU LEU A . n A 1 4 GLY 4 613 613 GLY GLY A . n A 1 5 SER 5 614 614 SER SER A . n A 1 6 LEU 6 615 615 LEU LEU A . n A 1 7 GLY 7 616 616 GLY GLY A . n A 1 8 ARG 8 617 617 ARG ARG A . n A 1 9 ARG 9 618 618 ARG ARG A . n A 1 10 TRP 10 619 619 TRP TRP A . n A 1 11 GLY 11 620 620 GLY GLY A . n A 1 12 PRO 12 621 621 PRO PRO A . n A 1 13 ASN 13 622 622 ASN ASN A . n A 1 14 VAL 14 623 623 VAL VAL A . n A 1 15 GLN 15 624 624 GLN GLN A . n A 1 16 ARG 16 625 625 ARG ARG A . n A 1 17 LEU 17 626 626 LEU LEU A . n A 1 18 ALA 18 627 627 ALA ALA A . n A 1 19 CYS 19 628 628 CYS CYS A . n A 1 20 ILE 20 629 629 ILE ILE A . n A 1 21 LYS 21 630 630 LYS LYS A . n A 1 22 LYS 22 631 631 LYS LYS A . n A 1 23 HIS 23 632 632 HIS HIS A . n A 1 24 LEU 24 633 633 LEU LEU A . n A 1 25 ARG 25 634 634 ARG ARG A . n A 1 26 SER 26 635 635 SER SER A . n A 1 27 GLN 27 636 636 GLN GLN A . n A 1 28 GLY 28 637 637 GLY GLY A . n A 1 29 ILE 29 638 638 ILE ILE A . n A 1 30 THR 30 639 639 THR THR A . n A 1 31 MET 31 640 640 MET MET A . n A 1 32 ASP 32 641 641 ASP ASP A . n A 1 33 GLU 33 642 642 GLU GLU A . n A 1 34 LEU 34 643 643 LEU LEU A . n A 1 35 PRO 35 644 644 PRO PRO A . n A 1 36 LEU 36 645 645 LEU LEU A . n A 1 37 ILE 37 646 646 ILE ILE A . n A 1 38 GLY 38 647 647 GLY GLY A . n A 1 39 GLY 39 648 648 GLY GLY A . n A 1 40 CYS 40 649 649 CYS CYS A . n A 1 41 GLU 41 650 650 GLU GLU A . n A 1 42 LEU 42 651 651 LEU LEU A . n A 1 43 ASP 43 652 652 ASP ASP A . n A 1 44 LEU 44 653 653 LEU LEU A . n A 1 45 ALA 45 654 654 ALA ALA A . n A 1 46 CYS 46 655 655 CYS CYS A . n A 1 47 PHE 47 656 656 PHE PHE A . n A 1 48 PHE 48 657 657 PHE PHE A . n A 1 49 ARG 49 658 658 ARG ARG A . n A 1 50 LEU 50 659 659 LEU LEU A . n A 1 51 ILE 51 660 660 ILE ILE A . n A 1 52 ASN 52 661 661 ASN ASN A . n A 1 53 GLU 53 662 662 GLU GLU A . n A 1 54 MET 54 663 663 MET MET A . n A 1 55 GLY 55 664 664 GLY GLY A . n A 1 56 GLY 56 665 665 GLY GLY A . n A 1 57 MET 57 666 666 MET MET A . n A 1 58 GLN 58 667 667 GLN GLN A . n A 1 59 GLN 59 668 668 GLN GLN A . n A 1 60 VAL 60 669 669 VAL VAL A . n A 1 61 THR 61 670 670 THR THR A . n A 1 62 ASP 62 671 671 ASP ASP A . n A 1 63 LEU 63 672 672 LEU LEU A . n A 1 64 LYS 64 673 673 LYS LYS A . n A 1 65 LYS 65 674 674 LYS LYS A . n A 1 66 TRP 66 675 675 TRP TRP A . n A 1 67 ASN 67 676 676 ASN ASN A . n A 1 68 LYS 68 677 677 LYS LYS A . n A 1 69 LEU 69 678 678 LEU LEU A . n A 1 70 ALA 70 679 679 ALA ALA A . n A 1 71 ASP 71 680 680 ASP ASP A . n A 1 72 MET 72 681 681 MET MET A . n A 1 73 LEU 73 682 682 LEU LEU A . n A 1 74 ARG 74 683 683 ARG ARG A . n A 1 75 ILE 75 684 684 ILE ILE A . n A 1 76 PRO 76 685 685 PRO PRO A . n A 1 77 LYS 77 686 686 LYS LYS A . n A 1 78 THR 78 687 687 THR THR A . n A 1 79 ALA 79 688 688 ALA ALA A . n A 1 80 GLN 80 689 689 GLN GLN A . n A 1 81 ASP 81 690 690 ASP ASP A . n A 1 82 ARG 82 691 691 ARG ARG A . n A 1 83 LEU 83 692 692 LEU LEU A . n A 1 84 ALA 84 693 693 ALA ALA A . n A 1 85 LYS 85 694 694 LYS LYS A . n A 1 86 LEU 86 695 695 LEU LEU A . n A 1 87 GLN 87 696 696 GLN GLN A . n A 1 88 GLU 88 697 697 GLU GLU A . n A 1 89 ALA 89 698 698 ALA ALA A . n A 1 90 TYR 90 699 699 TYR TYR A . n A 1 91 CYS 91 700 700 CYS CYS A . n A 1 92 GLN 92 701 701 GLN GLN A . n A 1 93 TYR 93 702 702 TYR TYR A . n A 1 94 LEU 94 703 703 LEU LEU A . n A 1 95 LEU 95 704 704 LEU LEU A . n A 1 96 SER 96 705 705 SER SER A . n A 1 97 TYR 97 706 706 TYR TYR A . n A 1 98 ASP 98 707 707 ASP ASP A . n A 1 99 SER 99 708 708 SER SER A . n A 1 100 LEU 100 709 709 LEU LEU A . n A 1 101 SER 101 710 710 SER SER A . n A 1 102 PRO 102 711 711 PRO PRO A . n A 1 103 GLU 103 712 712 GLU GLU A . n A 1 104 GLU 104 713 713 GLU GLU A . n A 1 105 HIS 105 714 714 HIS HIS A . n A 1 106 ARG 106 715 715 ARG ARG A . n A 1 107 ARG 107 716 716 ARG ARG A . n A 1 108 LEU 108 717 717 LEU LEU A . n A 1 109 GLU 109 718 718 GLU GLU A . n A 1 110 LYS 110 719 719 LYS LYS A . n A 1 111 GLU 111 720 720 GLU GLU A . n A 1 112 VAL 112 721 721 VAL VAL A . n A 1 113 LEU 113 722 722 LEU LEU A . n A 1 114 MET 114 723 723 MET MET A . n A 1 115 GLU 115 724 724 GLU GLU A . n A 1 116 LYS 116 725 725 LYS LYS A . n A 1 117 GLU 117 726 726 GLU GLU A . n A 1 118 ILE 118 727 727 ILE ILE A . n A 1 119 LEU 119 728 728 LEU LEU A . n A 1 120 GLU 120 729 729 GLU GLU A . n A 1 121 LYS 121 730 730 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINE METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Jmj-ARID(615-730)-1' ? 0.25-1.6 mM '[U-15N]' 1 'Jmj-ARID(615-730)-2' ? 0.25-1.6 mM '[U-13C; U-15N]' 2 'Jmj-ARID(615-730)-3' ? 0.25-1.6 mM '[U-13C; U-15N]' 3 'Jmj-ARID(615-730)-4' ? 0.25-1.6 mM '[U-10% 13C; U-15N]' 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 16 _pdbx_validate_close_contact.auth_atom_id_1 H _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ILE _pdbx_validate_close_contact.auth_seq_id_1 646 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 CYS _pdbx_validate_close_contact.auth_seq_id_2 649 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 614 ? ? -98.85 31.84 2 1 ARG A 617 ? ? -110.89 -143.85 3 1 GLU A 642 ? ? -63.57 -79.90 4 1 LEU A 643 ? ? -178.37 132.34 5 1 MET A 663 ? ? -95.46 36.61 6 1 LYS A 673 ? ? 49.71 81.77 7 1 LYS A 674 ? ? -144.48 20.18 8 1 ARG A 683 ? ? 70.40 71.74 9 1 TYR A 702 ? ? -119.11 -78.21 10 2 SER A 614 ? ? 61.75 69.17 11 2 ARG A 617 ? ? 59.33 134.59 12 2 GLU A 642 ? ? -71.61 -78.21 13 2 LEU A 643 ? ? -179.93 128.37 14 2 LYS A 673 ? ? 50.46 84.15 15 2 LYS A 674 ? ? -148.73 21.63 16 2 ARG A 683 ? ? 71.66 71.79 17 2 TYR A 702 ? ? -118.44 -78.83 18 3 ARG A 617 ? ? -115.25 -143.07 19 3 ARG A 618 ? ? 70.41 147.24 20 3 GLU A 642 ? ? -72.39 -78.23 21 3 LEU A 643 ? ? -177.37 138.54 22 3 LYS A 673 ? ? 49.86 82.96 23 3 LYS A 674 ? ? -142.73 23.73 24 3 ARG A 683 ? ? 68.84 71.77 25 3 TYR A 702 ? ? -117.57 -75.94 26 4 SER A 614 ? ? 59.22 108.93 27 4 GLU A 642 ? ? -70.91 -73.67 28 4 LEU A 643 ? ? -179.73 130.77 29 4 LYS A 673 ? ? 48.56 84.81 30 4 LYS A 674 ? ? -145.06 22.90 31 4 ARG A 683 ? ? 69.38 71.81 32 4 TYR A 702 ? ? -113.47 -78.99 33 5 SER A 614 ? ? -94.65 43.88 34 5 ARG A 617 ? ? -123.24 -146.00 35 5 GLU A 642 ? ? -71.23 -79.49 36 5 LEU A 643 ? ? -178.36 133.82 37 5 MET A 663 ? ? -96.16 33.59 38 5 LYS A 673 ? ? 49.07 83.43 39 5 LYS A 674 ? ? -146.18 22.70 40 5 ARG A 683 ? ? 70.02 71.80 41 5 TYR A 702 ? ? -122.55 -75.94 42 6 SER A 614 ? ? 60.59 91.24 43 6 ARG A 617 ? ? -119.53 -144.08 44 6 TRP A 619 ? ? -52.43 178.60 45 6 GLU A 642 ? ? -71.57 -76.18 46 6 LEU A 643 ? ? -179.75 139.24 47 6 LYS A 673 ? ? 48.92 84.18 48 6 LYS A 674 ? ? -145.65 22.16 49 6 ARG A 683 ? ? 71.23 71.74 50 6 TYR A 702 ? ? -121.61 -74.83 51 7 ARG A 617 ? ? -118.29 -144.88 52 7 GLU A 642 ? ? -60.96 -76.40 53 7 LEU A 643 ? ? -178.74 123.28 54 7 MET A 663 ? ? -95.49 35.91 55 7 LYS A 673 ? ? 48.87 83.63 56 7 LYS A 674 ? ? -142.46 22.98 57 7 ARG A 683 ? ? 70.86 71.69 58 7 TYR A 702 ? ? -115.47 -77.16 59 8 GLU A 642 ? ? -70.28 -78.33 60 8 LEU A 643 ? ? -177.59 132.53 61 8 MET A 663 ? ? -94.24 36.63 62 8 LYS A 673 ? ? 49.46 82.70 63 8 LYS A 674 ? ? -146.31 22.47 64 8 ARG A 683 ? ? 68.68 71.79 65 8 TYR A 702 ? ? -117.42 -78.59 66 9 SER A 614 ? ? 61.25 94.66 67 9 GLU A 642 ? ? -66.95 -77.83 68 9 LEU A 643 ? ? -176.43 140.96 69 9 MET A 663 ? ? -94.57 36.49 70 9 LYS A 673 ? ? 48.89 85.62 71 9 LYS A 674 ? ? -147.13 22.07 72 9 ARG A 683 ? ? 73.68 71.88 73 9 TYR A 702 ? ? -115.55 -78.85 74 10 SER A 614 ? ? -158.27 60.54 75 10 GLU A 642 ? ? -72.73 -78.61 76 10 LEU A 643 ? ? -178.87 126.79 77 10 MET A 663 ? ? -94.93 36.44 78 10 LYS A 673 ? ? 49.22 84.47 79 10 LYS A 674 ? ? -144.72 21.86 80 10 ARG A 683 ? ? 72.10 71.85 81 10 TYR A 702 ? ? -116.33 -79.59 82 11 ARG A 617 ? ? -129.67 -145.97 83 11 GLU A 642 ? ? -70.84 -79.01 84 11 LEU A 643 ? ? -178.97 135.02 85 11 LYS A 673 ? ? 48.98 83.48 86 11 LYS A 674 ? ? -144.79 21.51 87 11 ARG A 683 ? ? 70.49 72.01 88 11 TYR A 702 ? ? -121.56 -75.47 89 11 GLU A 729 ? ? -79.86 -71.07 90 12 SER A 614 ? ? -98.79 31.42 91 12 LEU A 615 ? ? -68.47 -176.75 92 12 ARG A 617 ? ? -109.94 -143.66 93 12 GLU A 642 ? ? -66.43 -80.80 94 12 LEU A 643 ? ? -177.11 118.52 95 12 MET A 663 ? ? -90.20 36.67 96 12 LYS A 673 ? ? 49.36 87.21 97 12 LYS A 674 ? ? -150.08 22.07 98 12 ARG A 683 ? ? 71.44 72.03 99 12 TYR A 702 ? ? -118.69 -78.67 100 13 SER A 614 ? ? 60.99 77.35 101 13 GLU A 642 ? ? -62.02 -82.00 102 13 LEU A 643 ? ? -177.80 117.43 103 13 LYS A 673 ? ? 48.27 86.09 104 13 LYS A 674 ? ? -149.15 21.68 105 13 ARG A 683 ? ? 70.56 71.92 106 13 TYR A 702 ? ? -121.51 -78.64 107 14 ARG A 618 ? ? -176.18 134.77 108 14 GLU A 642 ? ? -50.55 -72.39 109 14 LEU A 643 ? ? 179.67 134.40 110 14 MET A 663 ? ? -95.67 34.70 111 14 LYS A 673 ? ? 49.07 86.43 112 14 LYS A 674 ? ? -144.88 22.21 113 14 ARG A 683 ? ? 70.63 71.93 114 14 TYR A 702 ? ? -117.69 -79.05 115 15 ARG A 617 ? ? -121.47 -143.09 116 15 ARG A 618 ? ? 64.30 149.06 117 15 GLU A 642 ? ? -59.49 -73.40 118 15 LEU A 643 ? ? 179.13 118.41 119 15 LYS A 673 ? ? 49.87 84.20 120 15 LYS A 674 ? ? -146.02 21.63 121 15 ARG A 683 ? ? 73.17 71.70 122 15 TYR A 702 ? ? -114.44 -76.56 123 16 GLU A 642 ? ? -67.48 -78.62 124 16 LEU A 643 ? ? 178.06 129.81 125 16 MET A 663 ? ? -95.03 36.66 126 16 LYS A 673 ? ? 46.67 77.19 127 16 ARG A 683 ? ? 74.89 71.72 128 16 TYR A 702 ? ? -123.30 -76.58 129 17 SER A 614 ? ? 62.91 79.88 130 17 ARG A 618 ? ? 64.41 130.85 131 17 GLU A 642 ? ? -49.59 -72.60 132 17 LEU A 643 ? ? -178.05 117.66 133 17 MET A 663 ? ? -96.74 36.58 134 17 LYS A 673 ? ? 50.14 85.19 135 17 LYS A 674 ? ? -147.88 19.88 136 17 ARG A 683 ? ? 71.88 71.85 137 17 TYR A 702 ? ? -117.98 -74.94 138 18 SER A 614 ? ? 60.24 97.97 139 18 GLU A 642 ? ? -79.86 -80.13 140 18 LEU A 643 ? ? -177.54 140.14 141 18 LYS A 673 ? ? 48.77 86.60 142 18 LYS A 674 ? ? -149.15 21.75 143 18 ARG A 683 ? ? 68.50 71.81 144 18 TYR A 702 ? ? -117.68 -78.27 145 18 GLU A 729 ? ? -71.98 -70.64 146 19 SER A 614 ? ? -142.37 33.15 147 19 GLU A 642 ? ? -69.59 -77.39 148 19 LEU A 643 ? ? -179.98 136.68 149 19 MET A 663 ? ? -94.25 31.86 150 19 LYS A 673 ? ? 49.02 86.35 151 19 LYS A 674 ? ? -146.20 21.91 152 19 ARG A 683 ? ? 72.34 71.76 153 19 TYR A 702 ? ? -118.46 -78.53 154 20 SER A 614 ? ? -171.48 35.76 155 20 GLU A 642 ? ? -74.51 -80.09 156 20 LEU A 643 ? ? -179.08 132.09 157 20 MET A 663 ? ? -96.49 32.30 158 20 LYS A 673 ? ? 49.54 82.17 159 20 LYS A 674 ? ? -142.19 23.40 160 20 ARG A 683 ? ? 66.84 71.88 161 20 TYR A 702 ? ? -119.06 -79.08 #