HEADER HYDROLASE 03-MAR-09 2RQ7 TITLE SOLUTION STRUCTURE OF THE EPSILON SUBUNIT CHIMERA COMBINING THE N- TITLE 2 TERMINAL BETA-SANDWICH DOMAIN FROM T. ELONGATUS BP-1 F1 AND THE C- TITLE 3 TERMINAL ALPHA-HELICAL DOMAIN FROM SPINACH CHLOROPLAST F1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SYNTHASE EPSILON CHAIN,ATP SYNTHASE EPSILON CHAIN, COMPND 3 CHLOROPLASTIC; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT,F-ATPASE EPSILON COMPND 6 SUBUNIT,ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT,F-ATPASE EPSILON COMPND 7 SUBUNIT; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 OTHER_DETAILS: THE FUSION PROTEIN OF BETA-SANDWICH DOMAIN (RESIDUES COMPND 11 1-88) FROM T. ELONGATUS BP-1 F1 AND ALPHA-HELICAL DOMAIN (RESIDUES COMPND 12 89-134) FROM SPINACH CHLOROPLAST F1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS (STRAIN BP-1), SOURCE 3 SPINACIA OLERACEA; SOURCE 4 ORGANISM_COMMON: SPINACH; SOURCE 5 ORGANISM_TAXID: 197221, 3562; SOURCE 6 STRAIN: BP-1; SOURCE 7 GENE: ATPC, ATPE, TLR0526, ATPE; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR, VECTOR; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PET23A KEYWDS ATP SYNTHASE, F1FO ATP SYNTHASE, F1-ATPASE, EPSILON SUBUNIT, KEYWDS 2 CHLOROPLAST, ATP SYNTHESIS, CF1, HYDROGEN ION TRANSPORT, HYDROLASE, KEYWDS 3 ION TRANSPORT, MEMBRANE, THYLAKOID, TRANSPORT, PLASTID, CF(1) EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.YAGI,H.KONNO,T.MURAKAMI-FUSE,H.OROGUCHI,T.AKUTSU,M.IKEGUCHI, AUTHOR 2 T.HISABORI REVDAT 3 01-MAY-24 2RQ7 1 REMARK REVDAT 2 01-JAN-20 2RQ7 1 COMPND SOURCE REMARK SEQADV REVDAT 1 12-JAN-10 2RQ7 0 JRNL AUTH H.YAGI,H.KONNO,T.MURAKAMI-FUSE,A.ISU,T.OROGUCHI,H.AKUTSU, JRNL AUTH 2 M.IKEGUCHI,T.HISABORI JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THE INTRINSIC JRNL TITL 2 INHIBITOR SUBUNIT EPSILON OF F1-ATPASE FROM PHOTOSYNTHETIC JRNL TITL 3 ORGANISMS. JRNL REF BIOCHEM.J. V. 425 85 2010 JRNL REFN ISSN 0264-6021 JRNL PMID 19785575 JRNL DOI 10.1042/BJ20091247 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.6 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RQ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000150153. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-99% 15N] ATP SYNTHASE REMARK 210 EPSILON CHAIN-1, 1.0 MM [U-99% REMARK 210 13C; U-99% 15N] ATP SYNTHASE REMARK 210 EPSILON CHAIN-2, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 2D 1H-1H NOESY; 3D REMARK 210 H(CCO)NH; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY; 3D HBHA(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 12 -169.31 177.24 REMARK 500 1 VAL A 14 -69.79 -97.71 REMARK 500 1 TRP A 15 174.23 179.35 REMARK 500 1 GLU A 20 -40.11 -131.68 REMARK 500 1 ASP A 54 -56.72 -176.92 REMARK 500 1 MET A 63 -169.17 -74.45 REMARK 500 1 GLU A 70 119.99 -172.55 REMARK 500 1 THR A 86 35.28 -95.06 REMARK 500 1 ALA A 106 -171.69 -60.61 REMARK 500 1 ASN A 130 46.04 -96.04 REMARK 500 2 LYS A 12 -169.91 177.44 REMARK 500 2 VAL A 14 -69.53 -91.34 REMARK 500 2 TRP A 15 -177.27 -179.98 REMARK 500 2 HIS A 37 159.26 -49.54 REMARK 500 2 ASP A 54 -74.53 -176.90 REMARK 500 2 GLU A 70 121.56 -172.39 REMARK 500 2 ALA A 106 171.02 -59.95 REMARK 500 2 GLU A 107 -170.57 -65.34 REMARK 500 3 LYS A 12 -169.26 175.43 REMARK 500 3 TRP A 15 -169.95 179.89 REMARK 500 3 ASP A 54 -72.89 -178.40 REMARK 500 3 MET A 63 -168.23 -62.46 REMARK 500 3 GLU A 70 114.17 -172.12 REMARK 500 3 ASN A 79 53.37 -118.15 REMARK 500 3 GLU A 82 149.92 -179.28 REMARK 500 3 THR A 86 35.47 -95.08 REMARK 500 3 ALA A 106 -176.24 -68.50 REMARK 500 3 GLU A 107 -170.61 -62.68 REMARK 500 4 LYS A 12 161.84 175.01 REMARK 500 4 VAL A 14 -74.45 -65.33 REMARK 500 4 TRP A 15 -169.58 178.84 REMARK 500 4 HIS A 37 159.20 -48.25 REMARK 500 4 ASP A 54 -66.53 -173.82 REMARK 500 4 GLU A 70 124.48 -172.68 REMARK 500 4 THR A 86 35.18 -95.55 REMARK 500 4 GLU A 107 84.57 -168.60 REMARK 500 4 ASN A 130 46.56 -100.55 REMARK 500 4 ILE A 132 109.12 -179.32 REMARK 500 5 LYS A 12 -169.52 177.41 REMARK 500 5 VAL A 14 -70.22 -103.56 REMARK 500 5 ALA A 19 138.94 -177.03 REMARK 500 5 GLN A 53 -74.47 -86.44 REMARK 500 5 ASP A 54 36.25 -179.00 REMARK 500 5 ARG A 55 -49.17 -178.09 REMARK 500 5 MET A 63 -169.54 -65.65 REMARK 500 5 GLU A 70 122.90 -172.62 REMARK 500 5 ASN A 79 43.22 -92.72 REMARK 500 5 THR A 86 31.56 -95.56 REMARK 500 5 GLU A 107 90.68 -176.84 REMARK 500 5 ASN A 130 46.60 -106.42 REMARK 500 REMARK 500 THIS ENTRY HAS 206 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RQ6 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FUSION PROTEIN OF BETA-SANDWICH DOMAIN (RESIDUES 1-88) FROM T. REMARK 999 ELONGATUS BP-1 F1 AND ALPHA-HELICAL DOMAIN (RESIDUES 89-134) FROM REMARK 999 SPINACH CHLOROPLAST F1 DBREF 2RQ7 A 1 88 UNP Q8DLG7 ATPE_THEEB 1 88 DBREF 2RQ7 A 89 134 UNP P00833 ATPE_SPIOL 89 134 SEQADV 2RQ7 ALA A 109 UNP P00833 LYS 109 ENGINEERED MUTATION SEQRES 1 A 134 MET VAL MET THR VAL ARG VAL ILE ALA PRO ASP LYS THR SEQRES 2 A 134 VAL TRP ASP ALA PRO ALA GLU GLU VAL ILE LEU PRO SER SEQRES 3 A 134 THR THR GLY GLN LEU GLY ILE LEU SER ASN HIS ALA PRO SEQRES 4 A 134 LEU LEU THR ALA LEU GLU THR GLY VAL MET ARG VAL ARG SEQRES 5 A 134 GLN ASP ARG GLU TRP VAL ALA ILE ALA LEU MET GLY GLY SEQRES 6 A 134 PHE ALA GLU VAL GLU ASN ASN GLU VAL THR ILE LEU VAL SEQRES 7 A 134 ASN GLY ALA GLU ARG GLY ASP THR ILE ASP PRO GLN GLU SEQRES 8 A 134 ALA GLN GLN THR LEU GLU ILE ALA GLU ALA ASN LEU ARG SEQRES 9 A 134 LYS ALA GLU GLY ALA ARG GLN LYS ILE GLU ALA ASN LEU SEQRES 10 A 134 ALA LEU ARG ARG ALA ARG THR ARG VAL GLU ALA SER ASN SEQRES 11 A 134 THR ILE SER SER HELIX 1 1 ASP A 85 ILE A 87 5 3 HELIX 2 2 ASP A 88 LYS A 105 1 18 HELIX 3 3 GLY A 108 ASN A 130 1 23 SHEET 1 A 5 THR A 13 ALA A 19 0 SHEET 2 A 5 MET A 3 ILE A 8 -1 N MET A 3 O ALA A 19 SHEET 3 A 5 VAL A 74 VAL A 78 1 O ILE A 76 N ILE A 8 SHEET 4 A 5 GLY A 65 VAL A 69 -1 N PHE A 66 O LEU A 77 SHEET 5 A 5 LEU A 40 LEU A 44 -1 N THR A 42 O ALA A 67 SHEET 1 B 5 LEU A 31 LEU A 34 0 SHEET 2 B 5 GLU A 21 LEU A 24 -1 N VAL A 22 O ILE A 33 SHEET 3 B 5 GLY A 47 ARG A 52 -1 O ARG A 52 N GLU A 21 SHEET 4 B 5 TRP A 57 LEU A 62 -1 O VAL A 58 N VAL A 51 SHEET 5 B 5 ALA A 81 ARG A 83 -1 O GLU A 82 N ALA A 61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1