HEADER CELL CYCLE 14-OCT-09 2RQQ TITLE STRUCTURE OF C-TERMINAL REGION OF CDT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPLICATION FACTOR CDT1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 450-557; COMPND 5 SYNONYM: DOUBLE PARKED HOMOLOG, DUP, RETROVIRAL INSERTION SITE 2 COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CDT1, RIS2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX KEYWDS LICENSING FACTOR, CELL CYCLE, DNA REPLICATION, DNA-BINDING, PROTO- KEYWDS 2 ONCOGENE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.G.JEE,T.MIZUNO,K.KAMADA,H.TOCHIO,H.HIROAKI,F.HANAOKA,M.SHIRAKAWA REVDAT 4 29-MAY-24 2RQQ 1 REMARK REVDAT 3 16-MAR-22 2RQQ 1 REMARK SEQADV REVDAT 2 21-JUL-10 2RQQ 1 JRNL REVDAT 1 23-MAR-10 2RQQ 0 JRNL AUTH J.G.JEE,T.MIZUNO,K.KAMADA,H.TOCHIO,Y.CHIBA,K.YANAGI, JRNL AUTH 2 G.YASUDA,H.HIROAKI,F.HANAOKA,M.SHIRAKAWA JRNL TITL STRUCTURE AND MUTAGENESIS STUDIES OF THE C-TERMINAL REGION JRNL TITL 2 OF LICENSING FACTOR CDT1 ENABLE THE IDENTIFICATION OF KEY JRNL TITL 3 RESIDUES FOR BINDING TO REPLICATIVE HELICASE MCM PROTEINS JRNL REF J.BIOL.CHEM. V. 285 15931 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20335175 JRNL DOI 10.1074/JBC.M109.075333 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0, CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RQQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000150172. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN; 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 ARG A 465 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 4 ARG A 474 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 6 ARG A 465 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 14 ARG A 547 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 15 ARG A 465 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 18 ARG A 474 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 529 -22.56 -150.31 REMARK 500 2 MET A 450 26.84 46.61 REMARK 500 2 THR A 451 11.76 57.12 REMARK 500 2 ARG A 452 46.99 -159.51 REMARK 500 2 THR A 529 -22.99 -146.25 REMARK 500 3 MET A 450 108.26 -55.24 REMARK 500 3 THR A 451 70.99 34.14 REMARK 500 3 THR A 529 -22.61 -153.29 REMARK 500 4 LEU A 447 -41.51 76.96 REMARK 500 4 ARG A 452 13.13 -142.20 REMARK 500 4 THR A 529 -22.75 -147.03 REMARK 500 5 LEU A 447 -34.08 178.56 REMARK 500 5 SER A 449 64.42 -155.79 REMARK 500 5 ARG A 452 48.93 -147.75 REMARK 500 5 ARG A 481 33.54 71.96 REMARK 500 5 THR A 529 -22.90 -147.07 REMARK 500 6 LEU A 447 3.89 -65.06 REMARK 500 6 ARG A 452 57.90 32.69 REMARK 500 6 THR A 529 -22.68 -145.63 REMARK 500 7 PRO A 446 -71.89 -64.95 REMARK 500 7 LEU A 447 51.88 34.49 REMARK 500 7 THR A 529 -7.75 -142.97 REMARK 500 8 LEU A 447 -174.57 54.18 REMARK 500 8 SER A 449 97.93 65.68 REMARK 500 8 ARG A 452 -165.96 54.53 REMARK 500 8 THR A 529 -12.60 -141.48 REMARK 500 9 LEU A 447 26.68 45.56 REMARK 500 9 CYS A 453 155.64 64.51 REMARK 500 9 ILE A 527 -158.32 -84.33 REMARK 500 9 THR A 529 -22.98 -148.98 REMARK 500 10 PRO A 446 34.68 -81.38 REMARK 500 10 LEU A 447 -27.65 71.72 REMARK 500 10 ARG A 452 44.63 38.60 REMARK 500 10 PRO A 519 3.89 -69.94 REMARK 500 10 ILE A 527 -159.32 -84.38 REMARK 500 10 THR A 529 -22.96 -147.48 REMARK 500 11 CYS A 453 157.31 -45.27 REMARK 500 11 PRO A 519 21.86 -73.85 REMARK 500 11 THR A 529 -22.56 -154.62 REMARK 500 12 LEU A 447 36.48 38.74 REMARK 500 12 MET A 450 40.89 38.76 REMARK 500 12 ALA A 501 98.55 -67.66 REMARK 500 12 THR A 529 -23.21 -155.97 REMARK 500 13 SER A 449 79.52 61.33 REMARK 500 13 MET A 450 153.27 -44.15 REMARK 500 13 CYS A 453 81.98 8.92 REMARK 500 13 THR A 529 -22.79 -146.08 REMARK 500 14 SER A 449 32.53 -89.74 REMARK 500 14 ARG A 452 43.35 -69.46 REMARK 500 14 PRO A 519 20.16 -73.52 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2RQQ A 450 557 UNP Q8R4E9 CDT1_MOUSE 450 557 SEQADV 2RQQ GLY A 445 UNP Q8R4E9 EXPRESSION TAG SEQADV 2RQQ PRO A 446 UNP Q8R4E9 EXPRESSION TAG SEQADV 2RQQ LEU A 447 UNP Q8R4E9 EXPRESSION TAG SEQADV 2RQQ GLY A 448 UNP Q8R4E9 EXPRESSION TAG SEQADV 2RQQ SER A 449 UNP Q8R4E9 EXPRESSION TAG SEQRES 1 A 113 GLY PRO LEU GLY SER MET THR ARG CYS PRO GLU GLN GLU SEQRES 2 A 113 LEU ARG LEU GLN ARG LEU GLU ARG LEU PRO GLU LEU ALA SEQRES 3 A 113 ARG VAL LEU ARG ASN VAL PHE VAL SER GLU ARG LYS PRO SEQRES 4 A 113 ALA LEU THR MET GLU VAL VAL CYS ALA ARG MET VAL ASP SEQRES 5 A 113 SER CYS GLN THR ALA LEU SER PRO GLY GLU MET GLU LYS SEQRES 6 A 113 HIS LEU VAL LEU LEU ALA GLU LEU LEU PRO ASP TRP LEU SEQRES 7 A 113 SER LEU HIS ARG ILE ARG THR ASP THR TYR VAL LYS LEU SEQRES 8 A 113 ASP LYS ALA VAL ASP LEU ALA GLY LEU THR ALA ARG LEU SEQRES 9 A 113 ALA HIS HIS VAL HIS ALA GLU GLY LEU HELIX 1 1 PRO A 454 ARG A 481 1 28 HELIX 2 2 MET A 487 SER A 497 1 11 HELIX 3 3 SER A 503 LEU A 518 1 16 HELIX 4 4 ASP A 540 LEU A 548 1 9 HELIX 5 5 LEU A 548 HIS A 553 1 6 SHEET 1 A 3 LEU A 485 THR A 486 0 SHEET 2 A 3 THR A 531 LEU A 535 -1 O VAL A 533 N LEU A 485 SHEET 3 A 3 LEU A 522 ARG A 526 -1 N HIS A 525 O TYR A 532 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1