HEADER SIGNALING PROTEIN 21-DEC-09 2RQW TITLE SOLUTION STRUCTURE OF BEM1P SH3CI DOMAIN COMPLEXED WITH STE20P-PRR TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BUD EMERGENCE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3CI DOMAIN, RESIDUES 156-260; COMPND 5 SYNONYM: BEM1P, SUPPRESSOR OF RHO3 PROTEIN 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 24-MERIC PEPTIDE FROM SERINE/THREONINE-PROTEIN KINASE COMPND 9 STE20; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: BEM1-BINDING DOMAIN, RESIDUES 463-486; COMPND 12 SYNONYM: STE20P-PRR PEPTIDE; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-21D; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 4932; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PGEX KEYWDS BEM1P, STE20P, SH3CI, PRR, CYTOPLASM, CYTOSKELETON, SH3 DOMAIN, CELL KEYWDS 2 CYCLE, PHEROMONE RESPONSE, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 3 SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TAKAKU,K.OGURA,F.INAGAKI REVDAT 4 01-MAY-24 2RQW 1 REMARK REVDAT 3 23-JUN-10 2RQW 1 JRNL REVDAT 2 05-MAY-10 2RQW 1 JRNL REVDAT 1 21-APR-10 2RQW 0 JRNL AUTH T.TAKAKU,K.OGURA,H.KUMETA,N.YOSHIDA,F.INAGAKI JRNL TITL SOLUTION STRUCTURE OF A NOVEL CDC42-BINDING MODULE OF BEM1 JRNL TITL 2 AND ITS INTERACTION WITH STE20 AND CDC42 JRNL REF J.BIOL.CHEM. V. 285 19346 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20410294 JRNL DOI 10.1074/JBC.M110.116749 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RQW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000150178. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN; 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1386 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9136 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 157 110.18 -166.39 REMARK 500 1 GLU A 169 16.55 -144.60 REMARK 500 1 GLU A 173 108.36 -36.51 REMARK 500 1 CYS A 185 -48.25 -135.21 REMARK 500 1 CYS A 190 28.85 40.81 REMARK 500 1 ILE A 217 28.98 45.03 REMARK 500 1 THR A 223 25.75 45.90 REMARK 500 1 THR A 238 175.50 -58.88 REMARK 500 1 ASN A 245 108.58 -175.82 REMARK 500 1 ALA A 247 97.27 -44.70 REMARK 500 1 ARG A 248 -166.03 -176.63 REMARK 500 1 TYR A 249 128.85 -173.27 REMARK 500 1 SER A 258 51.89 -95.92 REMARK 500 1 VAL A 259 119.95 -161.30 REMARK 500 1 PRO B 475 -166.81 -74.95 REMARK 500 1 PRO B 477 -162.65 -74.94 REMARK 500 1 ALA B 483 56.52 -117.60 REMARK 500 2 GLU A 169 24.53 -156.72 REMARK 500 2 GLU A 173 111.63 -36.92 REMARK 500 2 CYS A 185 -47.26 -135.78 REMARK 500 2 CYS A 190 28.33 41.57 REMARK 500 2 ASP A 216 55.39 76.22 REMARK 500 2 THR A 219 61.44 64.19 REMARK 500 2 THR A 223 26.33 48.63 REMARK 500 2 THR A 238 -179.35 -60.15 REMARK 500 2 SER A 252 -177.54 -65.50 REMARK 500 2 ALA B 476 140.10 163.10 REMARK 500 2 PRO B 477 -163.40 -75.02 REMARK 500 2 SER B 481 129.64 156.98 REMARK 500 3 SER A 157 49.35 -86.67 REMARK 500 3 GLU A 169 24.08 -155.71 REMARK 500 3 GLU A 173 110.01 -36.10 REMARK 500 3 CYS A 185 -44.39 -147.03 REMARK 500 3 CYS A 190 27.23 42.00 REMARK 500 3 ILE A 198 68.80 -105.06 REMARK 500 3 ARG A 200 97.14 -37.00 REMARK 500 3 LEU A 201 137.48 173.80 REMARK 500 3 ILE A 215 147.12 176.28 REMARK 500 3 ASP A 216 -59.91 -123.31 REMARK 500 3 ILE A 217 105.21 -168.56 REMARK 500 3 ALA A 218 -179.03 -175.02 REMARK 500 3 SER A 258 -62.05 -133.18 REMARK 500 3 VAL A 259 148.69 -171.72 REMARK 500 3 PRO B 475 -168.48 -74.97 REMARK 500 3 PRO B 480 -89.77 -75.05 REMARK 500 3 SER B 482 -50.32 -139.63 REMARK 500 4 GLU A 169 18.87 -148.22 REMARK 500 4 GLU A 173 105.57 -33.75 REMARK 500 4 CYS A 185 -51.09 -138.66 REMARK 500 4 ASN A 189 25.68 48.13 REMARK 500 REMARK 500 THIS ENTRY HAS 300 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RQV RELATED DB: PDB REMARK 900 SH3CI DOMAIN OF BEM1P DBREF 2RQW A 156 260 UNP P29366 BEM1_YEAST 156 260 DBREF 2RQW B 463 486 UNP Q03497 STE20_YEAST 463 486 SEQRES 1 A 105 GLY SER LEU TYR ALA ILE VAL LEU TYR ASP PHE LYS ALA SEQRES 2 A 105 GLU LYS ALA ASP GLU LEU THR THR TYR VAL GLY GLU ASN SEQRES 3 A 105 LEU PHE ILE CYS ALA HIS HIS ASN CYS GLU TRP PHE ILE SEQRES 4 A 105 ALA LYS PRO ILE GLY ARG LEU GLY GLY PRO GLY LEU VAL SEQRES 5 A 105 PRO VAL GLY PHE VAL SER ILE ILE ASP ILE ALA THR GLY SEQRES 6 A 105 TYR ALA THR GLY ASN ASP VAL ILE GLU ASP ILE LYS SER SEQRES 7 A 105 VAL ASN LEU PRO THR VAL GLN GLU TRP LYS SER ASN ILE SEQRES 8 A 105 ALA ARG TYR LYS ALA SER ASN ILE SER LEU GLY SER VAL SEQRES 9 A 105 GLU SEQRES 1 B 24 SER SER SER ALA ASN GLY LYS PHE ILE PRO SER ARG PRO SEQRES 2 B 24 ALA PRO LYS PRO PRO SER SER ALA SER ALA SER HELIX 1 1 TYR A 221 ASN A 225 5 5 HELIX 2 2 ASP A 226 ASN A 235 1 10 HELIX 3 3 THR A 238 LYS A 243 1 6 SHEET 1 A 5 GLY A 205 PRO A 208 0 SHEET 2 A 5 TRP A 192 LYS A 196 -1 N PHE A 193 O VAL A 207 SHEET 3 A 5 GLU A 180 HIS A 188 -1 N PHE A 183 O LYS A 196 SHEET 4 A 5 TYR A 159 VAL A 162 -1 N ALA A 160 O LEU A 182 SHEET 5 A 5 VAL A 212 ILE A 215 -1 O ILE A 215 N TYR A 159 CISPEP 1 GLY A 203 PRO A 204 1 -0.06 CISPEP 2 GLY A 203 PRO A 204 2 0.06 CISPEP 3 GLY A 203 PRO A 204 3 -0.05 CISPEP 4 GLY A 203 PRO A 204 4 0.08 CISPEP 5 GLY A 203 PRO A 204 5 -0.06 CISPEP 6 GLY A 203 PRO A 204 6 -0.04 CISPEP 7 GLY A 203 PRO A 204 7 0.01 CISPEP 8 GLY A 203 PRO A 204 8 0.08 CISPEP 9 GLY A 203 PRO A 204 9 -0.12 CISPEP 10 GLY A 203 PRO A 204 10 -0.04 CISPEP 11 GLY A 203 PRO A 204 11 0.11 CISPEP 12 GLY A 203 PRO A 204 12 -0.09 CISPEP 13 GLY A 203 PRO A 204 13 0.00 CISPEP 14 GLY A 203 PRO A 204 14 0.02 CISPEP 15 GLY A 203 PRO A 204 15 0.07 CISPEP 16 GLY A 203 PRO A 204 16 -0.02 CISPEP 17 GLY A 203 PRO A 204 17 0.04 CISPEP 18 GLY A 203 PRO A 204 18 -0.05 CISPEP 19 GLY A 203 PRO A 204 19 0.04 CISPEP 20 GLY A 203 PRO A 204 20 0.09 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1