HEADER TRANSCRIPTION 18-APR-12 2RSO TITLE SOLUTION STRUCTURE OF THE CHROMODOMAIN OF SWI6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMATIN-ASSOCIATED PROTEIN SWI6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 55-142; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 284812; SOURCE 5 STRAIN: 972; SOURCE 6 GENE: SWI6; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PCOLD KEYWDS CHROMODOMAIN, CHROMATIN, SILENCING, CHROMOSOMAL PROTEIN, METHYLATION, KEYWDS 2 TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.SHIMOJO,Y.NISHIMURA REVDAT 3 15-MAY-24 2RSO 1 REMARK REVDAT 2 14-JUN-23 2RSO 1 REMARK SEQADV REVDAT 1 29-AUG-12 2RSO 0 JRNL AUTH M.ISHIDA,H.SHIMOJO,A.HAYASHI,R.KAWAGUCHI,Y.OHTANI,K.UEGAKI, JRNL AUTH 2 Y.NISHIMURA,J.NAKAYAMA JRNL TITL INTRINSIC NUCLEIC ACID-BINDING ACTIVITY OF CHP1 CHROMODOMAIN JRNL TITL 2 IS REQUIRED FOR HETEROCHROMATIC GENE SILENCING JRNL REF MOL.CELL V. 47 228 2012 JRNL REFN ISSN 1097-2765 JRNL PMID 22727667 JRNL DOI 10.1016/J.MOLCEL.2012.05.017 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CYANA REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RSO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000150236. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.3-0.5MM [U-99% 13C; U-99% 15N] REMARK 210 SWI6-CD-1, 10MM POTASSIUM REMARK 210 CHLORIDE-2, 20MM SODIUM REMARK 210 PHOSPHATE-3, 5MM [U-100% 2H] DTT- REMARK 210 4, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCO; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D C(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D H(CCO)NH; 3D HCCH- REMARK 210 TOCSY; 3D HCCH-COSY; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : OLIVIA, CYANA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 600 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 53 43.58 -99.93 REMARK 500 1 GLU A 55 -74.12 -68.65 REMARK 500 1 SER A 59 -74.55 -88.29 REMARK 500 1 PRO A 110 -165.02 -69.80 REMARK 500 1 ASN A 113 -168.39 -59.64 REMARK 500 2 GLU A 55 74.09 -116.84 REMARK 500 2 GLU A 71 136.30 -172.63 REMARK 500 2 PRO A 110 -165.10 -69.76 REMARK 500 2 ASN A 113 -171.43 -58.34 REMARK 500 3 PRO A 110 -165.35 -69.73 REMARK 500 3 ASN A 113 -169.00 -59.55 REMARK 500 3 SER A 117 174.99 -54.97 REMARK 500 4 PRO A 110 -165.08 -69.76 REMARK 500 4 ASN A 113 -169.64 -59.27 REMARK 500 4 GLU A 140 74.59 51.80 REMARK 500 5 GLU A 69 48.32 -107.14 REMARK 500 5 PRO A 110 -165.12 -69.80 REMARK 500 5 ASN A 113 -168.10 -59.64 REMARK 500 5 SER A 117 178.24 -59.24 REMARK 500 6 GLU A 55 48.22 -108.79 REMARK 500 6 GLU A 70 118.09 -160.86 REMARK 500 6 GLU A 74 68.50 -110.26 REMARK 500 6 PRO A 110 -165.26 -69.77 REMARK 500 6 ASN A 113 -168.94 -59.50 REMARK 500 7 GLU A 77 50.75 -107.57 REMARK 500 7 ASP A 79 105.63 -52.11 REMARK 500 7 PRO A 110 -165.28 -69.72 REMARK 500 7 ASN A 113 -177.49 -55.96 REMARK 500 7 SER A 117 -179.01 -67.58 REMARK 500 8 LYS A 61 113.68 -166.89 REMARK 500 8 PRO A 110 -165.69 -69.76 REMARK 500 8 ASN A 113 -177.78 -56.65 REMARK 500 9 PRO A 110 -164.88 -69.75 REMARK 500 9 ASN A 113 -168.62 -59.01 REMARK 500 9 SER A 117 178.24 -57.36 REMARK 500 10 GLU A 69 41.56 -95.71 REMARK 500 10 PRO A 110 -165.11 -69.71 REMARK 500 10 ASN A 113 -170.29 -58.74 REMARK 500 10 CYS A 124 19.39 -143.00 REMARK 500 10 PRO A 139 -177.41 -69.74 REMARK 500 11 GLU A 71 140.04 -170.17 REMARK 500 11 PRO A 110 -166.08 -69.82 REMARK 500 11 ASN A 113 -168.68 -59.88 REMARK 500 11 PRO A 139 -175.28 -69.78 REMARK 500 12 HIS A 53 -69.27 -101.01 REMARK 500 12 MET A 54 146.56 -170.92 REMARK 500 12 SER A 56 75.61 -101.20 REMARK 500 12 PRO A 110 -164.84 -69.73 REMARK 500 12 ASN A 113 -172.35 -57.07 REMARK 500 12 PRO A 139 -172.71 -69.71 REMARK 500 REMARK 500 THIS ENTRY HAS 95 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 11497 RELATED DB: BMRB REMARK 900 RELATED ID: 2RSN RELATED DB: PDB DBREF 2RSO A 55 142 UNP P40381 SWI6_SCHPO 55 142 SEQADV 2RSO GLY A 51 UNP P40381 EXPRESSION TAG SEQADV 2RSO SER A 52 UNP P40381 EXPRESSION TAG SEQADV 2RSO HIS A 53 UNP P40381 EXPRESSION TAG SEQADV 2RSO MET A 54 UNP P40381 EXPRESSION TAG SEQRES 1 A 92 GLY SER HIS MET GLU SER LYS SER SER SER LYS LYS LEU SEQRES 2 A 92 LYS GLU ASN ALA LYS GLU GLU GLU GLY GLY GLU GLU GLU SEQRES 3 A 92 GLU GLU ASP GLU TYR VAL VAL GLU LYS VAL LEU LYS HIS SEQRES 4 A 92 ARG MET ALA ARG LYS GLY GLY GLY TYR GLU TYR LEU LEU SEQRES 5 A 92 LYS TRP GLU GLY TYR ASP ASP PRO SER ASP ASN THR TRP SEQRES 6 A 92 SER SER GLU ALA ASP CYS SER GLY CYS LYS GLN LEU ILE SEQRES 7 A 92 GLU ALA TYR TRP ASN GLU HIS GLY GLY ARG PRO GLU PRO SEQRES 8 A 92 SER HELIX 1 1 SER A 117 GLY A 123 5 7 HELIX 2 2 CYS A 124 GLY A 136 1 13 SHEET 1 A 3 VAL A 83 MET A 91 0 SHEET 2 A 3 TYR A 98 TRP A 104 -1 O LYS A 103 N LYS A 85 SHEET 3 A 3 THR A 114 SER A 116 -1 O SER A 116 N TYR A 100 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1