HEADER TYROSINE PHOSPHATASE 01-DEC-97 2SHP TITLE TYROSINE PHOSPHATASE SHP-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHP-2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SYP, SHPTP-2; COMPND 5 EC: 3.1.3.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYROSINE PHOSPHATASE, INSULIN SIGNALING, SH2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.HOF,S.PLUSKEY,S.DHE-PAGANON,M.J.ECK,S.E.SHOELSON REVDAT 5 03-APR-24 2SHP 1 REMARK REVDAT 4 21-FEB-24 2SHP 1 REMARK REVDAT 3 03-NOV-21 2SHP 1 REMARK SEQADV REVDAT 2 24-FEB-09 2SHP 1 VERSN REVDAT 1 16-FEB-99 2SHP 0 JRNL AUTH P.HOF,S.PLUSKEY,S.DHE-PAGANON,M.J.ECK,S.E.SHOELSON JRNL TITL CRYSTAL STRUCTURE OF THE TYROSINE PHOSPHATASE SHP-2. JRNL REF CELL(CAMBRIDGE,MASS.) V. 92 441 1998 JRNL REFN ISSN 0092-8674 JRNL PMID 9491886 JRNL DOI 10.1016/S0092-8674(00)80938-1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.1000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.1 REMARK 3 NUMBER OF REFLECTIONS : 62840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2164 REMARK 3 BIN R VALUE (WORKING SET) : 0.2477 REMARK 3 BIN FREE R VALUE : 0.2863 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7918 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 777 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.546 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : CTAB.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : CTAB.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DATA USED AND MAPS 1SIGMA CUTOFF, R REMARK 3 -VALUES 2SIGMA CUTOFF, 2 MOLECULES IN THE ASYMMETRIC UNIT REMARK 4 REMARK 4 2SHP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : FEB-97 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71634 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.06170 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.29500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT, NCS REMARK 200 AVERAGING REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: PTP1B AND N-TERMINAL SH2 DOMAINS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 107.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 156 REMARK 465 LYS A 157 REMARK 465 GLY A 158 REMARK 465 GLU A 159 REMARK 465 SER A 160 REMARK 465 LEU A 236 REMARK 465 ALA A 237 REMARK 465 GLU A 238 REMARK 465 THR A 239 REMARK 465 THR A 240 REMARK 465 ASP A 241 REMARK 465 LYS A 242 REMARK 465 VAL A 243 REMARK 465 LYS A 244 REMARK 465 GLN A 245 REMARK 465 GLY A 295 REMARK 465 ASP A 296 REMARK 465 PRO A 297 REMARK 465 ASN A 298 REMARK 465 GLU A 299 REMARK 465 PRO A 300 REMARK 465 VAL A 301 REMARK 465 GLU A 313 REMARK 465 PHE A 314 REMARK 465 GLU A 315 REMARK 465 THR A 316 REMARK 465 LYS A 317 REMARK 465 CYS A 318 REMARK 465 ASN A 319 REMARK 465 ASN A 320 REMARK 465 SER A 321 REMARK 465 LYS A 322 REMARK 465 PRO A 323 REMARK 465 MET B 1 REMARK 465 ASP B 156 REMARK 465 LYS B 157 REMARK 465 GLY B 158 REMARK 465 GLU B 159 REMARK 465 SER B 160 REMARK 465 LEU B 236 REMARK 465 ALA B 237 REMARK 465 GLU B 238 REMARK 465 THR B 239 REMARK 465 THR B 240 REMARK 465 ASP B 241 REMARK 465 LYS B 242 REMARK 465 VAL B 243 REMARK 465 LYS B 244 REMARK 465 GLN B 245 REMARK 465 GLY B 295 REMARK 465 ASP B 296 REMARK 465 PRO B 297 REMARK 465 ASN B 298 REMARK 465 GLU B 299 REMARK 465 PRO B 300 REMARK 465 VAL B 301 REMARK 465 GLU B 313 REMARK 465 PHE B 314 REMARK 465 GLU B 315 REMARK 465 THR B 316 REMARK 465 LYS B 317 REMARK 465 CYS B 318 REMARK 465 ASN B 319 REMARK 465 ASN B 320 REMARK 465 SER B 321 REMARK 465 LYS B 322 REMARK 465 PRO B 323 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 ASP A 294 CG OD1 OD2 REMARK 470 LYS B 235 CG CD CE NZ REMARK 470 ASP B 294 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER B 513 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 399 HD1 HIS A 419 1.09 REMARK 500 HH22 ARG B 399 HD1 HIS B 419 1.09 REMARK 500 HZ2 LYS A 325 HD1 HIS A 443 1.16 REMARK 500 HZ2 LYS B 325 HD1 HIS B 443 1.16 REMARK 500 HZ1 LYS A 276 H2 HOH A 3243 1.22 REMARK 500 HH22 ARG B 4 H1 HOH B 3405 1.25 REMARK 500 HZ1 LYS A 358 H1 HOH A 3118 1.26 REMARK 500 HH21 ARG A 480 H2 HOH A 3712 1.33 REMARK 500 HH21 ARG B 47 H2 HOH B 3618 1.34 REMARK 500 HE21 GLN A 271 HZ1 LYS A 274 1.34 REMARK 500 H2 HOH B 3694 O HOH B 3720 1.50 REMARK 500 O HOH A 3138 H2 HOH A 3641 1.55 REMARK 500 O HOH A 3423 H1 HOH A 3672 1.57 REMARK 500 H1 HOH B 3040 O HOH B 3195 1.57 REMARK 500 H2 HOH B 3476 O HOH B 3587 1.58 REMARK 500 H2 HOH B 3095 O HOH B 3556 1.58 REMARK 500 H2 HOH A 3272 O HOH A 3402 1.59 REMARK 500 H1 HOH B 3337 O HOH B 3379 1.59 REMARK 500 H1 HOH B 3478 O HOH B 3721 1.59 REMARK 500 H1 HOH A 3069 O HOH A 3369 1.60 REMARK 500 H2 HOH B 3191 O HOH B 3585 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 3261 H1 HOH B 3595 2646 1.54 REMARK 500 O HOH A 3464 H2 HOH B 3407 1556 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 333 CB CYS A 333 SG -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 4 4.60 53.95 REMARK 500 ASN A 37 134.87 171.38 REMARK 500 GLU A 90 -109.18 -87.73 REMARK 500 ASN A 92 118.94 58.40 REMARK 500 ASP A 94 95.42 -41.99 REMARK 500 HIS A 116 37.89 35.05 REMARK 500 SER A 142 -96.71 -55.86 REMARK 500 LYS A 164 -75.67 -15.92 REMARK 500 SER A 165 -96.95 74.00 REMARK 500 THR A 205 86.92 -58.20 REMARK 500 LEU A 206 -18.23 156.71 REMARK 500 LYS A 369 108.64 -56.36 REMARK 500 TYR A 375 -9.70 82.27 REMARK 500 CYS A 459 -127.55 -133.16 REMARK 500 SER A 460 -74.69 -85.23 REMARK 500 ILE A 463 -32.65 -131.82 REMARK 500 VAL A 505 113.18 68.49 REMARK 500 ARG B 4 4.45 53.77 REMARK 500 ASN B 37 134.91 171.37 REMARK 500 GLU B 90 -109.60 -89.41 REMARK 500 ASN B 92 120.49 58.73 REMARK 500 ASP B 94 96.61 -38.35 REMARK 500 HIS B 116 38.08 34.94 REMARK 500 SER B 142 -95.12 -55.95 REMARK 500 LYS B 164 -75.78 -16.23 REMARK 500 SER B 165 -96.29 74.63 REMARK 500 THR B 205 86.59 -57.51 REMARK 500 LEU B 206 -19.39 155.92 REMARK 500 LYS B 369 108.18 -56.44 REMARK 500 TYR B 375 -9.20 82.90 REMARK 500 CYS B 459 -130.92 -132.70 REMARK 500 SER B 460 -73.47 -82.92 REMARK 500 ILE B 463 -32.59 -132.63 REMARK 500 VAL B 505 115.84 67.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 62 0.08 SIDE CHAIN REMARK 500 ARG A 289 0.09 SIDE CHAIN REMARK 500 ARG A 351 0.11 SIDE CHAIN REMARK 500 ARG A 399 0.11 SIDE CHAIN REMARK 500 ARG A 465 0.07 SIDE CHAIN REMARK 500 ARG A 498 0.08 SIDE CHAIN REMARK 500 TYR B 62 0.08 SIDE CHAIN REMARK 500 ARG B 289 0.09 SIDE CHAIN REMARK 500 ARG B 351 0.10 SIDE CHAIN REMARK 500 ARG B 399 0.11 SIDE CHAIN REMARK 500 ARG B 498 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAT A 1800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAT B 2800 DBREF 2SHP A 1 525 UNP Q06124 PTN11_HUMAN 1 525 DBREF 2SHP B 1 525 UNP Q06124 PTN11_HUMAN 1 525 SEQADV 2SHP LYS A 2 UNP Q06124 THR 2 ENGINEERED MUTATION SEQADV 2SHP LEU A 41 UNP Q06124 PHE 41 ENGINEERED MUTATION SEQADV 2SHP SER A 513 UNP Q06124 PHE 513 ENGINEERED MUTATION SEQADV 2SHP LYS B 2 UNP Q06124 THR 2 ENGINEERED MUTATION SEQADV 2SHP LEU B 41 UNP Q06124 PHE 41 ENGINEERED MUTATION SEQADV 2SHP SER B 513 UNP Q06124 PHE 513 ENGINEERED MUTATION SEQRES 1 A 525 MET LYS SER ARG ARG TRP PHE HIS PRO ASN ILE THR GLY SEQRES 2 A 525 VAL GLU ALA GLU ASN LEU LEU LEU THR ARG GLY VAL ASP SEQRES 3 A 525 GLY SER PHE LEU ALA ARG PRO SER LYS SER ASN PRO GLY SEQRES 4 A 525 ASP LEU THR LEU SER VAL ARG ARG ASN GLY ALA VAL THR SEQRES 5 A 525 HIS ILE LYS ILE GLN ASN THR GLY ASP TYR TYR ASP LEU SEQRES 6 A 525 TYR GLY GLY GLU LYS PHE ALA THR LEU ALA GLU LEU VAL SEQRES 7 A 525 GLN TYR TYR MET GLU HIS HIS GLY GLN LEU LYS GLU LYS SEQRES 8 A 525 ASN GLY ASP VAL ILE GLU LEU LYS TYR PRO LEU ASN CYS SEQRES 9 A 525 ALA ASP PRO THR SER GLU ARG TRP PHE HIS GLY HIS LEU SEQRES 10 A 525 SER GLY LYS GLU ALA GLU LYS LEU LEU THR GLU LYS GLY SEQRES 11 A 525 LYS HIS GLY SER PHE LEU VAL ARG GLU SER GLN SER HIS SEQRES 12 A 525 PRO GLY ASP PHE VAL LEU SER VAL ARG THR GLY ASP ASP SEQRES 13 A 525 LYS GLY GLU SER ASN ASP GLY LYS SER LYS VAL THR HIS SEQRES 14 A 525 VAL MET ILE ARG CYS GLN GLU LEU LYS TYR ASP VAL GLY SEQRES 15 A 525 GLY GLY GLU ARG PHE ASP SER LEU THR ASP LEU VAL GLU SEQRES 16 A 525 HIS TYR LYS LYS ASN PRO MET VAL GLU THR LEU GLY THR SEQRES 17 A 525 VAL LEU GLN LEU LYS GLN PRO LEU ASN THR THR ARG ILE SEQRES 18 A 525 ASN ALA ALA GLU ILE GLU SER ARG VAL ARG GLU LEU SER SEQRES 19 A 525 LYS LEU ALA GLU THR THR ASP LYS VAL LYS GLN GLY PHE SEQRES 20 A 525 TRP GLU GLU PHE GLU THR LEU GLN GLN GLN GLU CYS LYS SEQRES 21 A 525 LEU LEU TYR SER ARG LYS GLU GLY GLN ARG GLN GLU ASN SEQRES 22 A 525 LYS ASN LYS ASN ARG TYR LYS ASN ILE LEU PRO PHE ASP SEQRES 23 A 525 HIS THR ARG VAL VAL LEU HIS ASP GLY ASP PRO ASN GLU SEQRES 24 A 525 PRO VAL SER ASP TYR ILE ASN ALA ASN ILE ILE MET PRO SEQRES 25 A 525 GLU PHE GLU THR LYS CYS ASN ASN SER LYS PRO LYS LYS SEQRES 26 A 525 SER TYR ILE ALA THR GLN GLY CYS LEU GLN ASN THR VAL SEQRES 27 A 525 ASN ASP PHE TRP ARG MET VAL PHE GLN GLU ASN SER ARG SEQRES 28 A 525 VAL ILE VAL MET THR THR LYS GLU VAL GLU ARG GLY LYS SEQRES 29 A 525 SER LYS CYS VAL LYS TYR TRP PRO ASP GLU TYR ALA LEU SEQRES 30 A 525 LYS GLU TYR GLY VAL MET ARG VAL ARG ASN VAL LYS GLU SEQRES 31 A 525 SER ALA ALA HIS ASP TYR THR LEU ARG GLU LEU LYS LEU SEQRES 32 A 525 SER LYS VAL GLY GLN GLY ASN THR GLU ARG THR VAL TRP SEQRES 33 A 525 GLN TYR HIS PHE ARG THR TRP PRO ASP HIS GLY VAL PRO SEQRES 34 A 525 SER ASP PRO GLY GLY VAL LEU ASP PHE LEU GLU GLU VAL SEQRES 35 A 525 HIS HIS LYS GLN GLU SER ILE MET ASP ALA GLY PRO VAL SEQRES 36 A 525 VAL VAL HIS CYS SER ALA GLY ILE GLY ARG THR GLY THR SEQRES 37 A 525 PHE ILE VAL ILE ASP ILE LEU ILE ASP ILE ILE ARG GLU SEQRES 38 A 525 LYS GLY VAL ASP CYS ASP ILE ASP VAL PRO LYS THR ILE SEQRES 39 A 525 GLN MET VAL ARG SER GLN ARG SER GLY MET VAL GLN THR SEQRES 40 A 525 GLU ALA GLN TYR ARG SER ILE TYR MET ALA VAL GLN HIS SEQRES 41 A 525 TYR ILE GLU THR LEU SEQRES 1 B 525 MET LYS SER ARG ARG TRP PHE HIS PRO ASN ILE THR GLY SEQRES 2 B 525 VAL GLU ALA GLU ASN LEU LEU LEU THR ARG GLY VAL ASP SEQRES 3 B 525 GLY SER PHE LEU ALA ARG PRO SER LYS SER ASN PRO GLY SEQRES 4 B 525 ASP LEU THR LEU SER VAL ARG ARG ASN GLY ALA VAL THR SEQRES 5 B 525 HIS ILE LYS ILE GLN ASN THR GLY ASP TYR TYR ASP LEU SEQRES 6 B 525 TYR GLY GLY GLU LYS PHE ALA THR LEU ALA GLU LEU VAL SEQRES 7 B 525 GLN TYR TYR MET GLU HIS HIS GLY GLN LEU LYS GLU LYS SEQRES 8 B 525 ASN GLY ASP VAL ILE GLU LEU LYS TYR PRO LEU ASN CYS SEQRES 9 B 525 ALA ASP PRO THR SER GLU ARG TRP PHE HIS GLY HIS LEU SEQRES 10 B 525 SER GLY LYS GLU ALA GLU LYS LEU LEU THR GLU LYS GLY SEQRES 11 B 525 LYS HIS GLY SER PHE LEU VAL ARG GLU SER GLN SER HIS SEQRES 12 B 525 PRO GLY ASP PHE VAL LEU SER VAL ARG THR GLY ASP ASP SEQRES 13 B 525 LYS GLY GLU SER ASN ASP GLY LYS SER LYS VAL THR HIS SEQRES 14 B 525 VAL MET ILE ARG CYS GLN GLU LEU LYS TYR ASP VAL GLY SEQRES 15 B 525 GLY GLY GLU ARG PHE ASP SER LEU THR ASP LEU VAL GLU SEQRES 16 B 525 HIS TYR LYS LYS ASN PRO MET VAL GLU THR LEU GLY THR SEQRES 17 B 525 VAL LEU GLN LEU LYS GLN PRO LEU ASN THR THR ARG ILE SEQRES 18 B 525 ASN ALA ALA GLU ILE GLU SER ARG VAL ARG GLU LEU SER SEQRES 19 B 525 LYS LEU ALA GLU THR THR ASP LYS VAL LYS GLN GLY PHE SEQRES 20 B 525 TRP GLU GLU PHE GLU THR LEU GLN GLN GLN GLU CYS LYS SEQRES 21 B 525 LEU LEU TYR SER ARG LYS GLU GLY GLN ARG GLN GLU ASN SEQRES 22 B 525 LYS ASN LYS ASN ARG TYR LYS ASN ILE LEU PRO PHE ASP SEQRES 23 B 525 HIS THR ARG VAL VAL LEU HIS ASP GLY ASP PRO ASN GLU SEQRES 24 B 525 PRO VAL SER ASP TYR ILE ASN ALA ASN ILE ILE MET PRO SEQRES 25 B 525 GLU PHE GLU THR LYS CYS ASN ASN SER LYS PRO LYS LYS SEQRES 26 B 525 SER TYR ILE ALA THR GLN GLY CYS LEU GLN ASN THR VAL SEQRES 27 B 525 ASN ASP PHE TRP ARG MET VAL PHE GLN GLU ASN SER ARG SEQRES 28 B 525 VAL ILE VAL MET THR THR LYS GLU VAL GLU ARG GLY LYS SEQRES 29 B 525 SER LYS CYS VAL LYS TYR TRP PRO ASP GLU TYR ALA LEU SEQRES 30 B 525 LYS GLU TYR GLY VAL MET ARG VAL ARG ASN VAL LYS GLU SEQRES 31 B 525 SER ALA ALA HIS ASP TYR THR LEU ARG GLU LEU LYS LEU SEQRES 32 B 525 SER LYS VAL GLY GLN GLY ASN THR GLU ARG THR VAL TRP SEQRES 33 B 525 GLN TYR HIS PHE ARG THR TRP PRO ASP HIS GLY VAL PRO SEQRES 34 B 525 SER ASP PRO GLY GLY VAL LEU ASP PHE LEU GLU GLU VAL SEQRES 35 B 525 HIS HIS LYS GLN GLU SER ILE MET ASP ALA GLY PRO VAL SEQRES 36 B 525 VAL VAL HIS CYS SER ALA GLY ILE GLY ARG THR GLY THR SEQRES 37 B 525 PHE ILE VAL ILE ASP ILE LEU ILE ASP ILE ILE ARG GLU SEQRES 38 B 525 LYS GLY VAL ASP CYS ASP ILE ASP VAL PRO LYS THR ILE SEQRES 39 B 525 GLN MET VAL ARG SER GLN ARG SER GLY MET VAL GLN THR SEQRES 40 B 525 GLU ALA GLN TYR ARG SER ILE TYR MET ALA VAL GLN HIS SEQRES 41 B 525 TYR ILE GLU THR LEU HET CAT A1800 16 HET CAT B2800 16 HETNAM CAT DODECANE-TRIMETHYLAMINE FORMUL 3 CAT 2(C15 H34 N 1+) FORMUL 5 HOH *777(H2 O) HELIX 1 1 GLY A 13 ARG A 23 1 11 HELIX 2 2 LEU A 74 GLU A 83 1 10 HELIX 3 3 GLY A 119 LYS A 129 1 11 HELIX 4 4 LEU A 190 LYS A 199 1 10 HELIX 5 5 ALA A 223 SER A 234 5 12 HELIX 6 6 PHE A 247 LEU A 261 1 15 HELIX 7 7 LYS A 266 GLN A 269 1 4 HELIX 8 8 GLN A 271 LYS A 276 5 6 HELIX 9 9 GLN A 335 GLN A 347 5 13 HELIX 10 10 PRO A 432 GLU A 447 1 16 HELIX 11 11 ARG A 465 LYS A 482 1 18 HELIX 12 12 VAL A 490 ARG A 498 1 9 HELIX 13 13 GLU A 508 GLU A 523 1 16 HELIX 14 14 GLY B 13 ARG B 23 1 11 HELIX 15 15 LEU B 74 GLU B 83 1 10 HELIX 16 16 GLY B 119 LYS B 129 1 11 HELIX 17 17 LEU B 190 LYS B 199 1 10 HELIX 18 18 ALA B 223 SER B 234 5 12 HELIX 19 19 PHE B 247 LEU B 261 1 15 HELIX 20 20 LYS B 266 GLN B 269 1 4 HELIX 21 21 GLN B 271 LYS B 276 5 6 HELIX 22 22 VAL B 338 GLU B 348 1 11 HELIX 23 23 PRO B 432 GLU B 447 1 16 HELIX 24 24 ARG B 465 LYS B 482 1 18 HELIX 25 25 VAL B 490 ARG B 498 1 9 HELIX 26 26 GLU B 508 GLU B 523 1 16 SHEET 1 A 3 PHE A 29 PRO A 33 0 SHEET 2 A 3 ASP A 40 ARG A 47 -1 N SER A 44 O LEU A 30 SHEET 3 A 3 ALA A 50 GLN A 57 -1 N ILE A 56 O LEU A 41 SHEET 1 B 3 PHE A 135 GLU A 139 0 SHEET 2 B 3 PHE A 147 THR A 153 -1 N SER A 150 O LEU A 136 SHEET 3 B 3 LYS A 166 ILE A 172 -1 N ILE A 172 O PHE A 147 SHEET 1 C 2 ARG A 173 GLN A 175 0 SHEET 2 C 2 LYS A 178 ASP A 180 -1 N ASP A 180 O ARG A 173 SHEET 1 D 8 ALA A 307 MET A 311 0 SHEET 2 D 8 SER A 326 THR A 330 -1 N ALA A 329 O ASN A 308 SHEET 3 D 8 VAL A 455 HIS A 458 1 N VAL A 455 O ILE A 328 SHEET 4 D 8 VAL A 352 MET A 355 1 N VAL A 354 O VAL A 456 SHEET 5 D 8 ARG A 413 PHE A 420 1 N TRP A 416 O ILE A 353 SHEET 6 D 8 TYR A 396 LYS A 405 -1 N LEU A 403 O ARG A 413 SHEET 7 D 8 MET A 383 ALA A 392 -1 N SER A 391 O LEU A 398 SHEET 8 D 8 LEU A 377 TYR A 380 -1 N TYR A 380 O MET A 383 SHEET 1 E 3 PHE B 29 PRO B 33 0 SHEET 2 E 3 ASP B 40 ARG B 47 -1 N SER B 44 O LEU B 30 SHEET 3 E 3 ALA B 50 GLN B 57 -1 N ILE B 56 O LEU B 41 SHEET 1 F 3 PHE B 135 GLU B 139 0 SHEET 2 F 3 PHE B 147 THR B 153 -1 N SER B 150 O LEU B 136 SHEET 3 F 3 LYS B 166 ILE B 172 -1 N ILE B 172 O PHE B 147 SHEET 1 G 2 ARG B 173 GLN B 175 0 SHEET 2 G 2 LYS B 178 ASP B 180 -1 N ASP B 180 O ARG B 173 SHEET 1 H 8 ALA B 307 ILE B 310 0 SHEET 2 H 8 TYR B 327 THR B 330 -1 N ALA B 329 O ASN B 308 SHEET 3 H 8 VAL B 455 HIS B 458 1 N VAL B 455 O ILE B 328 SHEET 4 H 8 VAL B 352 MET B 355 1 N VAL B 354 O VAL B 456 SHEET 5 H 8 ARG B 413 PHE B 420 1 N TRP B 416 O ILE B 353 SHEET 6 H 8 TYR B 396 LYS B 405 -1 N LEU B 403 O ARG B 413 SHEET 7 H 8 MET B 383 ALA B 392 -1 N SER B 391 O LEU B 398 SHEET 8 H 8 LEU B 377 TYR B 380 -1 N TYR B 380 O MET B 383 SITE 1 AC1 9 THR A 356 PHE A 420 TRP A 423 PRO A 429 SITE 2 AC1 9 VAL A 435 PHE A 438 PHE A 469 ILE A 472 SITE 3 AC1 9 SER A 513 SITE 1 AC2 12 THR B 356 PHE B 420 TRP B 423 PRO B 429 SITE 2 AC2 12 SER B 430 PRO B 432 VAL B 435 PHE B 438 SITE 3 AC2 12 PHE B 469 ILE B 472 SER B 513 MET B 516 CRYST1 45.900 214.500 55.700 90.00 96.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021786 0.000000 0.002405 0.00000 SCALE2 0.000000 0.004662 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018062 0.00000 MTRIX1 1 -0.965419 -0.014739 -0.260285 48.63360 1 MTRIX2 1 0.010936 -0.999811 0.016053 -24.79685 1 MTRIX3 1 -0.260473 0.012651 0.965398 -15.83565 1