HEADER OXIDOREDUCTASE (SUPEROXIDE ACCEPTOR) 25-MAR-80 2SOD TITLE DETERMINATION AND ANALYSIS OF THE 2 ANGSTROM STRUCTURE OF COPPER, ZINC TITLE 2 SUPEROXIDE DISMUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER,ZINC SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: O, Y, B, G; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913 KEYWDS OXIDOREDUCTASE (SUPEROXIDE ACCEPTOR) EXPDTA X-RAY DIFFRACTION AUTHOR J.A.TAINER,E.D.GETZOFF,J.S.RICHARDSON,D.C.RICHARDSON REVDAT 12 27-SEP-23 2SOD 1 REMARK LINK REVDAT 11 13-JUL-11 2SOD 1 VERSN REVDAT 10 24-FEB-09 2SOD 1 VERSN REVDAT 9 01-APR-03 2SOD 1 JRNL REVDAT 8 15-JAN-91 2SOD 1 HET REVDAT 7 31-JAN-84 2SOD 1 REMARK REVDAT 6 06-DEC-83 2SOD 1 REMARK REVDAT 5 30-SEP-83 2SOD 1 REVDAT REVDAT 4 25-OCT-82 2SOD 1 JRNL REVDAT 3 20-APR-81 2SOD 1 SHEET REVDAT 2 31-DEC-80 2SOD 1 REMARK REVDAT 1 07-MAY-80 2SOD 0 SPRSDE 07-MAY-80 2SOD 1SOD JRNL AUTH J.A.TAINER,E.D.GETZOFF,K.M.BEEM,J.S.RICHARDSON, JRNL AUTH 2 D.C.RICHARDSON JRNL TITL DETERMINATION AND ANALYSIS OF THE 2 A-STRUCTURE OF COPPER, JRNL TITL 2 ZINC SUPEROXIDE DISMUTASE. JRNL REF J.MOL.BIOL. V. 160 181 1982 JRNL REFN ISSN 0022-2836 JRNL PMID 7175933 JRNL DOI 10.1016/0022-2836(82)90174-7 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.A.TAINER,E.D.GETZOFF,J.S.RICHARDSON,D.C.RICHARDSON REMARK 1 TITL STRUCTURE AND MECHANISM OF COPPER, ZINC SUPEROXIDE DISMUTASE REMARK 1 REF NATURE V. 306 284 1983 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 2 REMARK 1 AUTH E.D.GETZOFF,J.A.TAINER,P.K.WEINER,P.A.KOLLMAN, REMARK 1 AUTH 2 J.S.RICHARDSON,D.C.RICHARDSON REMARK 1 TITL ELECTROSTATIC RECOGNITION BETWEEN SUPEROXIDE AND COPPER, REMARK 1 TITL 2 ZINC SUPEROXIDE DISMUTASE REMARK 1 REF NATURE V. 306 287 1983 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.M.BEEM,D.C.RICHARDSON,K.V.RAJAGOPALAN REMARK 1 TITL METAL SITES OF COPPER-ZINC SUPEROXIDE DISMUTASE REMARK 1 REF BIOCHEMISTRY V. 16 1930 1977 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH J.S.RICHARDSON,D.C.RICHARDSON,K.A.THOMAS,E.W.SILVERTON, REMARK 1 AUTH 2 D.R.DAVIES REMARK 1 TITL SIMILARITY OF THREE-DIMENSIONAL STRUCTURE BETWEEN THE REMARK 1 TITL 2 IMMUNOGLOBULIN DOMAIN AND THE COPPER,ZINC SUPEROXIDE REMARK 1 TITL 3 DISMUTASE SUBUNIT REMARK 1 REF J.MOL.BIOL. V. 102 221 1976 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 5 REMARK 1 AUTH J.S.RICHARDSON,R.A.THOMAS,D.C.RICHARDSON REMARK 1 TITL ALPHA-CARBON COORDINATES FOR BOVINE CU,ZN SUPEROXIDE REMARK 1 TITL 2 DISMUTASE REMARK 1 REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 63 986 1975 REMARK 1 REFN ISSN 0006-291X REMARK 1 REFERENCE 6 REMARK 1 AUTH J.S.RICHARDSON,K.A.THOMAS,B.H.RUBIN,D.C.RICHARDSON REMARK 1 TITL CRYSTAL STRUCTURE OF BOVINE CU,ZN SUPEROXIDE DISMUTASE AT 3 REMARK 1 TITL 2 ANGSTROMS RESOLUTION,CHAIN TRACING AND METAL LIGANDS REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 72 1349 1975 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 7 REMARK 1 AUTH K.A.THOMAS,B.H.RUBIN,C.J.BIER,J.S.RICHARDSON,D.C.RICHARDSON REMARK 1 TITL THE CRYSTAL STRUCTURE OF BOVINE CU2+,ZN2+ SUPEROXIDE REMARK 1 TITL 2 DISMUTASE AT 5.5 ANGSTROMS RESOLUTION REMARK 1 REF J.BIOL.CHEM. V. 249 5677 1974 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 8 REMARK 1 AUTH D.C.RICHARDSON,C.J.BIER,J.S.RICHARDSON REMARK 1 TITL TWO CRYSTAL FORMS OF BOVINE SUPEROXIDE DISMUTASE REMARK 1 REF J.BIOL.CHEM. V. 247 6368 1972 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4380 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 COORDINATES IN THE A*BC ORTHOGONAL FRAME ARE PRESENTED REMARK 3 BELOW FOR FOUR MONOMERS. ONE ENZYMATICALLY ACTIVE SOD REMARK 3 DIMER COMPRISES MONOMERS ORANGE (CHAIN INDICATOR O) AND REMARK 3 YELLOW (Y). ANOTHER DIMER COMPRISES MONOMERS BLUE (B) AND REMARK 3 GREEN (G). REMARK 3 REMARK 3 ONLY THOSE HYDROGEN BONDS OF WHICH THE DEPOSITORS ARE REMARK 3 MOST CERTAIN ARE PRESENTED ON THE CONECT RECORDS BELOW. REMARK 4 REMARK 4 2SOD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 46.64179 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.16304 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 -4.16391 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 46.64179 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.16304 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 -4.16391 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION WHICH WILL PLACE THE YELLOW MONOMER INTO REMARK 300 BEST ALIGNMENT WITH THE ORANGE MONOMER IS GIVEN BY MTRIX 1 REMARK 300 BELOW. THE TRANSFORMATION WHICH WILL PLACE THE BLUE REMARK 300 MONOMER INTO BEST ALIGNMENT WITH THE ORANGE MONOMER IS REMARK 300 GIVEN BY MTRIX 2 BELOW. THE TRANSFORMATION WHICH WILL REMARK 300 PLACE THE GREEN MONOMER INTO BEST ALIGNMENT WITH THE REMARK 300 ORANGE MONOMER IS GIVEN BY MTRIX 3 BELOW. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU O 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS O 44 ND1 REMARK 620 2 HIS O 46 NE2 130.2 REMARK 620 3 HIS O 61 NE2 74.7 89.1 REMARK 620 4 HIS O 118 NE2 93.7 106.4 164.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN O 153 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS O 61 ND1 REMARK 620 2 HIS O 69 ND1 111.1 REMARK 620 3 HIS O 78 ND1 107.5 130.0 REMARK 620 4 ASP O 81 OD1 100.0 78.7 124.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU Y 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS Y 44 ND1 REMARK 620 2 HIS Y 46 NE2 137.0 REMARK 620 3 HIS Y 61 NE2 78.7 87.0 REMARK 620 4 HIS Y 118 NE2 91.2 109.9 162.4 REMARK 620 5 HOH Y 154 O 119.3 95.9 76.8 96.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN Y 153 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS Y 61 ND1 REMARK 620 2 HIS Y 69 ND1 110.8 REMARK 620 3 HIS Y 78 ND1 109.6 119.7 REMARK 620 4 ASP Y 81 OD1 114.2 104.9 97.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 44 ND1 REMARK 620 2 HIS B 46 NE2 140.3 REMARK 620 3 HIS B 61 NE2 81.9 91.6 REMARK 620 4 HIS B 118 NE2 99.4 104.6 150.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 153 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 61 ND1 REMARK 620 2 HIS B 69 ND1 105.4 REMARK 620 3 HIS B 78 ND1 117.9 122.4 REMARK 620 4 ASP B 81 OD1 99.6 91.3 115.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU G 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS G 44 ND1 REMARK 620 2 HIS G 46 NE2 149.9 REMARK 620 3 HIS G 61 NE2 87.3 98.8 REMARK 620 4 HIS G 118 NE2 84.4 104.5 146.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G 153 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS G 61 ND1 REMARK 620 2 HIS G 69 ND1 109.2 REMARK 620 3 HIS G 78 ND1 121.3 116.4 REMARK 620 4 ASP G 81 OD1 105.8 90.1 109.0 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET REMARK 700 EACH MONOMER CONTAINS AN ACETYL GROUP BLOCKING THE REMARK 700 N-TERMINUS, 151 RESIDUES, ZN ION, CU ION AND A WATER REMARK 700 MOLECULE. THE DOMINANT STRUCTURAL FEATURE OF EACH MONOMER REMARK 700 IS AN EIGHT-STRANDED ANTI-PARALLEL BETA-BARREL. THERE ARE, REMARK 700 HOWEVER, NO HYDROGEN BONDS BETWEEN STRANDS 4 AND 5. THIS REMARK 700 BARREL IS DESCRIBED IN SHEET RECORDS BELOW AS A REMARK 700 NINE-STRANDED SHEET WITH IDENTICAL FIRST AND LAST STRANDS. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CUO REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COPPER BINDING SITE AND THE ENZYMATICALLY ACTIVE REMARK 800 SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNO REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ZINC BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: CUY REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COPPER BINDING SITE AND THE ENZYMATICALLY ACTIVE REMARK 800 SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNY REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ZINC BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: CUB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COPPER BINDING SITE AND THE ENZYMATICALLY ACTIVE REMARK 800 SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ZINC BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: CUG REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COPPER BINDING SITE AND THE ENZYMATICALLY ACTIVE REMARK 800 SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNG REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ZINC BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU O 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN O 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU Y 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN Y 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU G 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN G 153 DBREF 2SOD O 1 151 UNP P00442 SODC_BOVIN 1 151 DBREF 2SOD Y 1 151 UNP P00442 SODC_BOVIN 1 151 DBREF 2SOD B 1 151 UNP P00442 SODC_BOVIN 1 151 DBREF 2SOD G 1 151 UNP P00442 SODC_BOVIN 1 151 SEQRES 1 O 152 ACE ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY SEQRES 2 O 152 PRO VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP SEQRES 3 O 152 THR VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU SEQRES 4 O 152 GLY ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN SEQRES 5 O 152 THR GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO SEQRES 6 O 152 LEU SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG SEQRES 7 O 152 HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN SEQRES 8 O 152 GLY VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER SEQRES 9 O 152 LEU SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL SEQRES 10 O 152 VAL HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN SEQRES 11 O 152 GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU SEQRES 12 O 152 ALA CYS GLY VAL ILE GLY ILE ALA LYS SEQRES 1 Y 152 ACE ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY SEQRES 2 Y 152 PRO VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP SEQRES 3 Y 152 THR VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU SEQRES 4 Y 152 GLY ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN SEQRES 5 Y 152 THR GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO SEQRES 6 Y 152 LEU SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG SEQRES 7 Y 152 HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN SEQRES 8 Y 152 GLY VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER SEQRES 9 Y 152 LEU SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL SEQRES 10 Y 152 VAL HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN SEQRES 11 Y 152 GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU SEQRES 12 Y 152 ALA CYS GLY VAL ILE GLY ILE ALA LYS SEQRES 1 B 152 ACE ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY SEQRES 2 B 152 PRO VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP SEQRES 3 B 152 THR VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU SEQRES 4 B 152 GLY ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN SEQRES 5 B 152 THR GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO SEQRES 6 B 152 LEU SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG SEQRES 7 B 152 HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN SEQRES 8 B 152 GLY VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER SEQRES 9 B 152 LEU SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL SEQRES 10 B 152 VAL HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN SEQRES 11 B 152 GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU SEQRES 12 B 152 ALA CYS GLY VAL ILE GLY ILE ALA LYS SEQRES 1 G 152 ACE ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY SEQRES 2 G 152 PRO VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP SEQRES 3 G 152 THR VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU SEQRES 4 G 152 GLY ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN SEQRES 5 G 152 THR GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO SEQRES 6 G 152 LEU SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG SEQRES 7 G 152 HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN SEQRES 8 G 152 GLY VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER SEQRES 9 G 152 LEU SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL SEQRES 10 G 152 VAL HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN SEQRES 11 G 152 GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU SEQRES 12 G 152 ALA CYS GLY VAL ILE GLY ILE ALA LYS HET ACE O 0 3 HET ACE Y 0 3 HET ACE B 0 3 HET ACE G 0 3 HET CU O 152 1 HET ZN O 153 1 HET CU Y 152 1 HET ZN Y 153 1 HET CU B 152 1 HET ZN B 153 1 HET CU G 152 1 HET ZN G 153 1 HETNAM ACE ACETYL GROUP HETNAM CU COPPER (II) ION HETNAM ZN ZINC ION FORMUL 1 ACE 4(C2 H4 O) FORMUL 5 CU 4(CU 2+) FORMUL 6 ZN 4(ZN 2+) FORMUL 13 HOH *4(H2 O) HELIX 1 H1O GLU O 131 THR O 135 1VERY POOR SNGL LOOP ALPH-HELX 5 HELIX 2 H1Y GLU Y 131 THR Y 135 1VERY POOR SNGL LOOP ALPH-HELX 5 HELIX 3 H1B GLU B 131 THR B 135 1VERY POOR SNGL LOOP ALPH-HELX 5 HELIX 4 H1G GLU G 131 THR G 135 1VERY POOR SNGL LOOP ALPH-HELX 5 SHEET 1 S1O 9 ALA O 4 LYS O 9 0 SHEET 2 S1O 9 GLN O 15 GLU O 21 -1 N ALA O 4 O PHE O 20 SHEET 3 S1O 9 VAL O 27 THR O 34 -1 N GLU O 21 O VAL O 28 SHEET 4 S1O 9 ALA O 93 ASP O 99 -1 N VAL O 29 O ILE O 97 SHEET 5 S1O 9 GLY O 80 ALA O 87 -1 SHEET 6 S1O 9 GLY O 39 HIS O 46 -1 N VAL O 85 O HIS O 41 SHEET 7 S1O 9 ARG O 113 HIS O 118 -1 N HIS O 44 O VAL O 116 SHEET 8 S1O 9 CYS O 144 GLY O 148 -1 N MET O 115 O GLY O 145 SHEET 9 S1O 9 ALA O 4 LYS O 9 -1 N VAL O 146 O VAL O 7 SHEET 1 S1Y 9 ALA Y 4 LYS Y 9 0 SHEET 2 S1Y 9 GLN Y 15 GLU Y 21 -1 N ALA Y 4 O PHE Y 20 SHEET 3 S1Y 9 VAL Y 27 THR Y 34 -1 N GLU Y 21 O VAL Y 28 SHEET 4 S1Y 9 ALA Y 93 ASP Y 99 -1 N VAL Y 29 O ILE Y 97 SHEET 5 S1Y 9 GLY Y 80 ALA Y 87 -1 SHEET 6 S1Y 9 GLY Y 39 HIS Y 46 -1 N VAL Y 85 O HIS Y 41 SHEET 7 S1Y 9 ARG Y 113 HIS Y 118 -1 N HIS Y 44 O VAL Y 116 SHEET 8 S1Y 9 CYS Y 144 GLY Y 148 -1 N MET Y 115 O GLY Y 145 SHEET 9 S1Y 9 ALA Y 4 LYS Y 9 -1 N VAL Y 146 O VAL Y 7 SHEET 1 S1B 9 ALA B 4 LYS B 9 0 SHEET 2 S1B 9 GLN B 15 GLU B 21 -1 N ALA B 4 O PHE B 20 SHEET 3 S1B 9 VAL B 27 THR B 34 -1 N GLU B 21 O VAL B 28 SHEET 4 S1B 9 ALA B 93 ASP B 99 -1 N VAL B 29 O ILE B 97 SHEET 5 S1B 9 GLY B 80 ALA B 87 -1 SHEET 6 S1B 9 GLY B 39 HIS B 46 -1 N VAL B 85 O HIS B 41 SHEET 7 S1B 9 ARG B 113 HIS B 118 -1 N HIS B 44 O VAL B 116 SHEET 8 S1B 9 CYS B 144 GLY B 148 -1 N MET B 115 O GLY B 145 SHEET 9 S1B 9 ALA B 4 LYS B 9 -1 N VAL B 146 O VAL B 7 SHEET 1 S1G 9 ALA G 4 LYS G 9 0 SHEET 2 S1G 9 GLN G 15 GLU G 21 -1 N ALA G 4 O PHE G 20 SHEET 3 S1G 9 VAL G 27 THR G 34 -1 N GLU G 21 O VAL G 28 SHEET 4 S1G 9 ALA G 93 ASP G 99 -1 N VAL G 29 O ILE G 97 SHEET 5 S1G 9 GLY G 80 ALA G 87 -1 SHEET 6 S1G 9 GLY G 39 HIS G 46 -1 N VAL G 85 O HIS G 41 SHEET 7 S1G 9 ARG G 113 HIS G 118 -1 N HIS G 44 O VAL G 116 SHEET 8 S1G 9 CYS G 144 GLY G 148 -1 N MET G 115 O GLY G 145 SHEET 9 S1G 9 ALA G 4 LYS G 9 -1 N VAL G 146 O VAL G 7 SSBOND 1 CYS O 55 CYS O 144 1555 1555 1.98 SSBOND 2 CYS Y 55 CYS Y 144 1555 1555 1.97 SSBOND 3 CYS B 55 CYS B 144 1555 1555 2.07 SSBOND 4 CYS G 55 CYS G 144 1555 1555 2.00 LINK C ACE O 0 N ALA O 1 1555 1555 1.33 LINK C ACE Y 0 N ALA Y 1 1555 1555 1.39 LINK C ACE B 0 N ALA B 1 1555 1555 1.36 LINK C ACE G 0 N ALA G 1 1555 1555 1.31 LINK ND1 HIS O 44 CU CU O 152 1555 1555 2.01 LINK NE2 HIS O 46 CU CU O 152 1555 1555 2.11 LINK NE2 HIS O 61 CU CU O 152 1555 1555 2.21 LINK ND1 HIS O 61 ZN ZN O 153 1555 1555 2.10 LINK ND1 HIS O 69 ZN ZN O 153 1555 1555 2.14 LINK ND1 HIS O 78 ZN ZN O 153 1555 1555 2.04 LINK OD1 ASP O 81 ZN ZN O 153 1555 1555 1.91 LINK NE2 HIS O 118 CU CU O 152 1555 1555 2.10 LINK ND1 HIS Y 44 CU CU Y 152 1555 1555 1.96 LINK NE2 HIS Y 46 CU CU Y 152 1555 1555 2.12 LINK NE2 HIS Y 61 CU CU Y 152 1555 1555 1.98 LINK ND1 HIS Y 61 ZN ZN Y 153 1555 1555 2.07 LINK ND1 HIS Y 69 ZN ZN Y 153 1555 1555 2.08 LINK ND1 HIS Y 78 ZN ZN Y 153 1555 1555 2.16 LINK OD1 ASP Y 81 ZN ZN Y 153 1555 1555 2.07 LINK NE2 HIS Y 118 CU CU Y 152 1555 1555 1.99 LINK CU CU Y 152 O HOH Y 154 1555 1555 2.49 LINK ND1 HIS B 44 CU CU B 152 1555 1555 2.00 LINK NE2 HIS B 46 CU CU B 152 1555 1555 2.15 LINK NE2 HIS B 61 CU CU B 152 1555 1555 2.26 LINK ND1 HIS B 61 ZN ZN B 153 1555 1555 2.07 LINK ND1 HIS B 69 ZN ZN B 153 1555 1555 2.12 LINK ND1 HIS B 78 ZN ZN B 153 1555 1555 2.04 LINK OD1 ASP B 81 ZN ZN B 153 1555 1555 2.00 LINK NE2 HIS B 118 CU CU B 152 1555 1555 1.98 LINK ND1 HIS G 44 CU CU G 152 1555 1555 2.06 LINK NE2 HIS G 46 CU CU G 152 1555 1555 2.02 LINK NE2 HIS G 61 CU CU G 152 1555 1555 2.21 LINK ND1 HIS G 61 ZN ZN G 153 1555 1555 2.08 LINK ND1 HIS G 69 ZN ZN G 153 1555 1555 2.13 LINK ND1 HIS G 78 ZN ZN G 153 1555 1555 2.09 LINK OD1 ASP G 81 ZN ZN G 153 1555 1555 1.99 LINK NE2 HIS G 118 CU CU G 152 1555 1555 2.07 SITE 1 CUO 4 HIS O 44 HIS O 46 HIS O 61 HIS O 118 SITE 1 ZNO 4 HIS O 61 HIS O 69 HIS O 78 ASP O 81 SITE 1 CUY 4 HIS Y 44 HIS Y 46 HIS Y 61 HIS Y 118 SITE 1 ZNY 4 HIS Y 61 HIS Y 69 HIS Y 78 ASP Y 81 SITE 1 CUB 4 HIS B 44 HIS B 46 HIS B 61 HIS B 118 SITE 1 ZNB 4 HIS B 61 HIS B 69 HIS B 78 ASP B 81 SITE 1 CUG 4 HIS G 44 HIS G 46 HIS G 61 HIS G 118 SITE 1 ZNG 4 HIS G 61 HIS G 69 HIS G 78 ASP G 81 SITE 1 AC1 4 HIS O 44 HIS O 46 HIS O 61 HIS O 118 SITE 1 AC2 4 HIS O 61 HIS O 69 HIS O 78 ASP O 81 SITE 1 AC3 5 HIS Y 44 HIS Y 46 HIS Y 61 HIS Y 118 SITE 2 AC3 5 HOH Y 154 SITE 1 AC4 4 HIS Y 61 HIS Y 69 HIS Y 78 ASP Y 81 SITE 1 AC5 4 HIS B 44 HIS B 46 HIS B 61 HIS B 118 SITE 1 AC6 4 HIS B 61 HIS B 69 HIS B 78 ASP B 81 SITE 1 AC7 4 HIS G 44 HIS G 46 HIS G 61 HIS G 118 SITE 1 AC8 4 HIS G 61 HIS G 69 HIS G 78 ASP G 81 CRYST1 93.650 90.330 71.650 90.00 95.10 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010720 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011071 0.000000 0.00000 SCALE3 0.001246 0.000000 0.013957 0.00000 MTRIX1 1 -0.781140 0.204080 -0.590060 -59.69421 1 MTRIX2 1 0.162190 -0.846300 -0.507420 29.26225 1 MTRIX3 1 -0.602920 -0.492070 0.627980 -12.96087 1 MTRIX1 2 -0.766640 -0.067560 0.638520 -53.22701 1 MTRIX2 2 0.203310 0.917740 0.341210 -0.63586 1 MTRIX3 2 -0.609040 0.391400 -0.689830 -21.95514 1 MTRIX1 3 0.992260 -0.016400 -0.123090 -2.98838 1 MTRIX2 3 0.003860 -0.986680 0.162630 32.25722 1 MTRIX3 3 -0.124120 -0.161850 -0.978980 3.34240 1 HETATM 1 C ACE O 0 -21.225 25.808 -21.169 1.00 19.00 C HETATM 2 O ACE O 0 -20.735 26.891 -20.713 1.00 19.08 O HETATM 3 CH3 ACE O 0 -22.681 25.631 -21.581 1.00 18.60 C